MELO3C000732 (gene) Melon (DHL92) v4

Overview


Name	MELO3C000732
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Copper centre Cu(A)
Location	chr07: 5153985 .. 5154590 (+)
RNA-Seq Expression	MELO3C000732
Synteny	MELO3C000732

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGCTCTCTCGGGACCCCTACTCAAAGGCGAGCACTGGAATGAGAAAGGCTTGTAGACTCGTGAGGCTGAACGAGACATTCGAAAACGAAAGCGCACACTCTCAAGTGCTGAGAAAGGTGTCAGCAGGTGCGCGGAGCCGGAGCCCGCCTCGCCCGCTGGGCCGAGTCAAAGCCCACTTCAGAGTCAAAGCCTTTAGATAACAAAAAAAGGTGTCCGCCCCCCACGTAGCGGTCGCCAAACGGAGACGAGAGTTTCGCCTTTCGGCCGCGCCAGTCGCGTAGGGCGACCGGACCAGGCCGAGTCAGAAAGGCTTTGATGACTCAAGGTGAATCCCACGGAGCGGGAAAGGAGAGTGAGGGGAAGAGGGGGCTGCCCTCGGCCCGATCATCCTATTCGCTCCAACAGACAGGCATGGTTCTGTAGTCAAAGCTACTTCGTCACTTTCGTGTACCCATCGGACGGCAGCCCTTTCGGGGGTTCCTTAGGGACCGATTCACTCTGCGTAGATTGACTGAACGCAGAAAGCCTTCCACTGGCAGGCGATCGTGTTTTTCACAGGATTTCTCGTTACTCATGTCAGCATTCTCACTTCTGATATCTCCAGGT

mRNA sequence

CGCTCTCTCGGGACCCCTACTCAAAGGCGAGCACTGGAATGAGAAAGGCTTGTAGACTCGTGAGGCTGAACGAGACATTCGAAAACGAAAGCGCACACTCTCAAGTGCTGAGAAAGGTGTCAGCAGGTGCGCGGAGCCGGAGCCCGCCTCGCCCGTTCAGAGTCAAAGCCTTTAGATAACAAAAAAAGGTGTCCGCCCCCCACGTAGCGGTCGCCAAACGGAGACGAGAGTTTCGCCTTTCGGCCGCGCCAGTCGCGTAGGGCGACCGGACCAGGCCGAGTCAGAAAGGCTTTGATGACTCAAGGTGAATCCCACGGAGCGGGAAAGGAGAGTGAGGGGAAGAGGGGGCTGCCCTCGGCCCGATCATCCTATTCGCTCCAACAGACAGGCATGGTTCTGTAGTCAAAGCTACTTCGTCACTTTCGTGTACCCATCGGACGGCAGCCCTTTCGGGGGTTCCTTAGGGACCGATTCACTCTGCGTAGATTGACTGAACGCAGAAAGCCTTCCACTGGCAGGCGATCGTGTTTTTCACAGGATTTCTCGTTACTCATGTCAGCATTCTCACTTCTGATATCTCCAGGT

Coding sequence (CDS)

ATGAGAAAGGCTTGTAGACTCGTGAGGCTGAACGAGACATTCGAAAACGAAAGCGCACACTCTCAAGTGCTGAGAAAGGTGTCAGCAGGTGCGCGGAGCCGGAGCCCGCCTCGCCCGTTCAGAGTCAAAGCCTTTAGATAA

Protein sequence

MRKACRLVRLNETFENESAHSQVLRKVSAGARSRSPPRPFRVKAFR

Homology

[Close]

BLAST of MELO3C000732 vs. NCBI nr
Match: KAA0062755.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK08829.1 putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 59.3 bits (142), Expect = 1.0e-05
Identity = 29/32 (90.62%), Postives = 29/32 (90.62%), Query Frame = 0


Query: 1   MRKACRLVRLNETFENESAHSQVLRKVSAGAR 33
           MRKACRLVRLNETFENE AHSQVLRK SAG R
Sbjct: 71  MRKACRLVRLNETFENERAHSQVLRKASAGPR 102

[Close]

BLAST of MELO3C000732 vs. NCBI nr
Match: KAA0067773.1 (Copper centre Cu(A) [Cucumis melo var. makuwa])

HSP 1 Score: 57.4 bits (137), Expect = 3.8e-05
Identity = 29/36 (80.56%), Postives = 30/36 (83.33%), Query Frame = 0


Query: 1   MRKACRLVRLNETFENESAHSQVLRKVSAGARSRSP 37
           MRKACRLVRLNETFENESAH QVLR VS  AR+  P
Sbjct: 110 MRKACRLVRLNETFENESAHFQVLRNVSTVARATEP 145

[Close]

BLAST of MELO3C000732 vs. NCBI nr
Match: TYK27991.1 (hypothetical protein E5676_scaffold384G002020 [Cucumis melo var. makuwa])

HSP 1 Score: 56.6 bits (135), Expect = 6.5e-05
Identity = 28/36 (77.78%), Postives = 31/36 (86.11%), Query Frame = 0


Query: 3   KACRLVRLNETFENESAHSQVLRKVSAGARSRSPPR 39
           K CRLVRLNETFENESAHSQVLRKVS G  +++ PR
Sbjct: 233 KGCRLVRLNETFENESAHSQVLRKVSVGLVTKNLPR 268

[Close]

BLAST of MELO3C000732 vs. NCBI nr
Match: KAA0066843.1 (hypothetical protein E6C27_scaffold271G002080 [Cucumis melo var. makuwa])

HSP 1 Score: 56.6 bits (135), Expect = 6.5e-05
Identity = 28/36 (77.78%), Postives = 31/36 (86.11%), Query Frame = 0


Query: 3   KACRLVRLNETFENESAHSQVLRKVSAGARSRSPPR 39
           K CRLVRLNETFENESAHSQVLRKVS G  +++ PR
Sbjct: 233 KGCRLVRLNETFENESAHSQVLRKVSVGLVTKNLPR 268

[Close]

BLAST of MELO3C000732 vs. NCBI nr
Match: KAA0042454.1 (hypothetical protein E6C27_scaffold45606G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 53.9 bits (128), Expect = 4.2e-04
Identity = 29/39 (74.36%), Postives = 29/39 (74.36%), Query Frame = 0


Query: 1   MRKACRLVRLNETFENESAHSQVLRKVSAGARSRSPPRP 40
           MRKACRLVRLNETFENESAHSQVLRK S         RP
Sbjct: 212 MRKACRLVRLNETFENESAHSQVLRKRSPNGDESFAFRP 250

[Close]

BLAST of MELO3C000732 vs. ExPASy TrEMBL
Match: A0A5A7VA33 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold87G00090 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 4.9e-06
Identity = 29/32 (90.62%), Postives = 29/32 (90.62%), Query Frame = 0


Query: 1   MRKACRLVRLNETFENESAHSQVLRKVSAGAR 33
           MRKACRLVRLNETFENE AHSQVLRK SAG R
Sbjct: 71  MRKACRLVRLNETFENERAHSQVLRKASAGPR 102

[Close]

BLAST of MELO3C000732 vs. ExPASy TrEMBL
Match: A0A5A7VI55 (Copper centre Cu(A) OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold352G00970 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.8e-05
Identity = 29/36 (80.56%), Postives = 30/36 (83.33%), Query Frame = 0


Query: 1   MRKACRLVRLNETFENESAHSQVLRKVSAGARSRSP 37
           MRKACRLVRLNETFENESAH QVLR VS  AR+  P
Sbjct: 110 MRKACRLVRLNETFENESAHFQVLRNVSTVARATEP 145

[Close]

BLAST of MELO3C000732 vs. ExPASy TrEMBL
Match: A0A5A7VFJ7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold271G002080 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 3.1e-05
Identity = 28/36 (77.78%), Postives = 31/36 (86.11%), Query Frame = 0


Query: 3   KACRLVRLNETFENESAHSQVLRKVSAGARSRSPPR 39
           K CRLVRLNETFENESAHSQVLRKVS G  +++ PR
Sbjct: 233 KGCRLVRLNETFENESAHSQVLRKVSVGLVTKNLPR 268

[Close]

BLAST of MELO3C000732 vs. ExPASy TrEMBL
Match: A0A5D3DWH1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G002020 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 3.1e-05
Identity = 28/36 (77.78%), Postives = 31/36 (86.11%), Query Frame = 0


Query: 3   KACRLVRLNETFENESAHSQVLRKVSAGARSRSPPR 39
           K CRLVRLNETFENESAHSQVLRKVS G  +++ PR
Sbjct: 233 KGCRLVRLNETFENESAHSQVLRKVSVGLVTKNLPR 268

[Close]

BLAST of MELO3C000732 vs. ExPASy TrEMBL
Match: A0A5A7TGB6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold45606G00020 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.0e-04
Identity = 29/39 (74.36%), Postives = 29/39 (74.36%), Query Frame = 0


Query: 1   MRKACRLVRLNETFENESAHSQVLRKVSAGARSRSPPRP 40
           MRKACRLVRLNETFENESAHSQVLRK S         RP
Sbjct: 212 MRKACRLVRLNETFENESAHSQVLRKRSPNGDESFAFRP 250

The following BLAST results are available for this feature:

BLAST of MELO3C000732 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0062755.1	1.0e-05	90.63	putative mitochondrial protein [Cucumis melo var. makuwa] >TYK08829.1 putative m...	[more]
KAA0067773.1	3.8e-05	80.56	Copper centre Cu(A) [Cucumis melo var. makuwa]	[more]
TYK27991.1	6.5e-05	77.78	hypothetical protein E5676_scaffold384G002020 [Cucumis melo var. makuwa]	[more]
KAA0066843.1	6.5e-05	77.78	hypothetical protein E6C27_scaffold271G002080 [Cucumis melo var. makuwa]	[more]
KAA0042454.1	4.2e-04	74.36	hypothetical protein E6C27_scaffold45606G00020 [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C000732 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C000732 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VA33	4.9e-06	90.63	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A5A7VI55	1.8e-05	80.56	Copper centre Cu(A) OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold352G...	[more]
A0A5A7VFJ7	3.1e-05	77.78	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3DWH1	3.1e-05	77.78	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TGB6	2.0e-04	74.36	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of MELO3C000732 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..46

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C000732.1	MELO3C000732.1	mRNA