MELO3C000424 (gene) Melon (DHL92) v4

Overview


Name	MELO3C000424
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Nuclear-pore anchor isoform X2
Location	chr01: 19540341 .. 19541458 (-)
RNA-Seq Expression	MELO3C000424
Synteny	MELO3C000424

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGCAAATTAGAAGTTAAAAAGTTAAAATTCATCCAGCCATGATTAGGGTTAAGAACCTTTCCCCCCAAATAGAAAGGTGAAAAGTTACACATTTATGAAAATTCGGGTTATGTGAGACAGAAGCATTCCCCTCTCATATTACCTTTTCCGCTTCTTTCCTTTCCAACTCCCTCCAGAAAACCATTCATACCTTCTCTCCGTGGTATATTAGCCCGCAGTTGATCTGCGCCGGGCATTTTGTACCGCAAATCCAGCTAAAATGGCCCATTTATTCATCTCCGACGAGGAGTTCTCTCGTCACTCCGACGACGCTGCTTTTCTGGCCGAGAAGGCCGATGTCTTCATCCAAGGTCTCCGCAGCGAGCTCGAGACCGTCAGAGCCCAAGCTGATGCTGCTTCAATCACTGCGGAGCAAACTTGTTCTCTTCTTGACCAGAAGTTCCTCTCTCTTTCAGCTGAGTTCTCTGACCTCCAGTCTCAGAATGCACAGCTTCAAACGACCCTCGAACTCAGGCTCTCCGAGCTTGCGGAAGTCAAGTCCCAAAAACACCAACTCAATTTACTTTCCGTAAGAATGCTATTTCCTTTTTTCTCTCTTTCATTCATTTCGTTTACGCACATGTAATGAATCCCTCCATTTACACCTCCTTTCGTTAATATTAAATATTTTAAGCATTGGCTTCTTTGGTGCTTACAGATTGGGAAGGATGGTGAGATAGAGAGGTTAAATACAGAGTTATCTGAACTGCATAAATCAAAAAGACAGTTAATGAAGCTTATCGAGCATAAGGACTTAGAAATTAGTGAAAAAGATTCCACTATAAAGAGTTATCTTGACAAGATTGTAAGTTCCTTTCACTACTCCGACTTCCCATCCTTGTAATGAAAGATGTGGTAATAATTACAATTTGTGCTTTCCTACTAAAAATGTTTCGTTCTGATCGTTTTGGAGGTCAATTTGTCCGAGACAGCTGCTCAAAGAGAAGCCCGTATAAGCGAGGTCGACATGGAGTTGGTGCGTTCCCGGGCTGAATTCGCTCGCCTTACACAGGTGACCACTTCCTCACTATTGTCTTTGTTAAGAAACCGATTCACTTCAGACATTTGGATTTTATAA

mRNA sequence

CAGCAAATTAGAAGTTAAAAAGTTAAAATTCATCCAGCCATGATTAGGGTTAAGAACCTTTCCCCCCAAATAGAAAGGTGAAAAGTTACACATTTATGAAAATTCGGGTTATGTGAGACAGAAGCATTCCCCTCTCATATTACCTTTTCCGCTTCTTTCCTTTCCAACTCCCTCCAGAAAACCATTCATACCTTCTCTCCGTGGTATATTAGCCCGCAGTTGATCTGCGCCGGGCATTTTGTACCGCAAATCCAGCTAAAATGGCCCATTTATTCATCTCCGACGAGGAGTTCTCTCGTCACTCCGACGACGCTGCTTTTCTGGCCGAGAAGGCCGATGTCTTCATCCAAGGTCTCCGCAGCGAGCTCGAGACCGTCAGAGCCCAAGCTGATGCTGCTTCAATCACTGCGGAGCAAACTTGTTCTCTTCTTGACCAGAAGTTCCTCTCTCTTTCAGCTGAGTTCTCTGACCTCCAGTCTCAGAATGCACAGCTTCAAACGACCCTCGAACTCAGGCTCTCCGAGCTTGCGGAAGTCAAGTCCCAAAAACACCAACTCAATTTACTTTCCATTGGGAAGGATGGTGAGATAGAGAGGTTAAATACAGAGTTATCTGAACTGCATAAATCAAAAAGACAGTTAATGAAGCTTATCGAGCATAAGGACTTAGAAATTAGTGAAAAAGATTCCACTATAAAGAGTTATCTTGACAAGATTGTCAATTTGTCCGAGACAGCTGCTCAAAGAGAAGCCCGTATAAGCGAGGTCGACATGGAGTTGGTGCGTTCCCGGGCTGAATTCGCTCGCCTTACACAGGTGACCACTTCCTCACTATTGTCTTTGTTAAGAAACCGATTCACTTCAGACATTTGGATTTTATAA

Coding sequence (CDS)

ATGGCCCATTTATTCATCTCCGACGAGGAGTTCTCTCGTCACTCCGACGACGCTGCTTTTCTGGCCGAGAAGGCCGATGTCTTCATCCAAGGTCTCCGCAGCGAGCTCGAGACCGTCAGAGCCCAAGCTGATGCTGCTTCAATCACTGCGGAGCAAACTTGTTCTCTTCTTGACCAGAAGTTCCTCTCTCTTTCAGCTGAGTTCTCTGACCTCCAGTCTCAGAATGCACAGCTTCAAACGACCCTCGAACTCAGGCTCTCCGAGCTTGCGGAAGTCAAGTCCCAAAAACACCAACTCAATTTACTTTCCATTGGGAAGGATGGTGAGATAGAGAGGTTAAATACAGAGTTATCTGAACTGCATAAATCAAAAAGACAGTTAATGAAGCTTATCGAGCATAAGGACTTAGAAATTAGTGAAAAAGATTCCACTATAAAGAGTTATCTTGACAAGATTGTCAATTTGTCCGAGACAGCTGCTCAAAGAGAAGCCCGTATAAGCGAGGTCGACATGGAGTTGGTGCGTTCCCGGGCTGAATTCGCTCGCCTTACACAGGTGACCACTTCCTCACTATTGTCTTTGTTAAGAAACCGATTCACTTCAGACATTTGGATTTTATAA

Protein sequence

MAHLFISDEEFSRHSDDAAFLAEKADVFIQGLRSELETVRAQADAASITAEQTCSLLDQKFLSLSAEFSDLQSQNAQLQTTLELRLSELAEVKSQKHQLNLLSIGKDGEIERLNTELSELHKSKRQLMKLIEHKDLEISEKDSTIKSYLDKIVNLSETAAQREARISEVDMELVRSRAEFARLTQVTTSSLLSLLRNRFTSDIWIL

Homology

[Close]

BLAST of MELO3C000424 vs. NCBI nr
Match: KAA0062817.1 (nuclear-pore anchor isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 332.8 bits (852), Expect = 2.1e-87
Identity = 184/185 (99.46%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MAHLFISDEEFSRHSDDAAFLAEKADVFIQGLRSELETVRAQADAASITAEQTCSLLDQK 60
           MAHLFISDEEFSRHSDDAAFLAEKADVFIQGLRSELETVRAQADAASITAEQTCSLLDQK
Sbjct: 1   MAHLFISDEEFSRHSDDAAFLAEKADVFIQGLRSELETVRAQADAASITAEQTCSLLDQK 60

Query: 61  FLSLSAEFSDLQSQNAQLQTTLELRLSELAEVKSQKHQLNLLSIGKDGEIERLNTELSEL 120
           FLSLSAEFSDLQSQNAQLQTTLELRLSELAEVKSQKHQLNLLSIGKDGEIERLNTELSEL
Sbjct: 61  FLSLSAEFSDLQSQNAQLQTTLELRLSELAEVKSQKHQLNLLSIGKDGEIERLNTELSEL 120

Query: 121 HKSKRQLMKLIEHKDLEISEKDSTIKSYLDKIVNLSETAAQREARISEVDMELVRSRAEF 180
           HKSKRQLM+LIEHKDLEISEKDSTIKSYLDKIVNLSETAAQREARISEVDMELVRSRAEF
Sbjct: 121 HKSKRQLMELIEHKDLEISEKDSTIKSYLDKIVNLSETAAQREARISEVDMELVRSRAEF 180

Query: 181 ARLTQ 186
           ARLTQ
Sbjct: 181 ARLTQ 185

[Close]

BLAST of MELO3C000424 vs. NCBI nr
Match: KAA0051126.1 (nuclear-pore anchor isoform X2 [Cucumis melo var. makuwa] >TYJ96776.1 nuclear-pore anchor isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 332.8 bits (852), Expect = 2.1e-87
Identity = 184/185 (99.46%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MAHLFISDEEFSRHSDDAAFLAEKADVFIQGLRSELETVRAQADAASITAEQTCSLLDQK 60
           MAHLFISDEEFSRHSDDAAFLAEKADVFIQGLRSELETVRAQADAASITAEQTCSLLDQK
Sbjct: 1   MAHLFISDEEFSRHSDDAAFLAEKADVFIQGLRSELETVRAQADAASITAEQTCSLLDQK 60

Query: 61  FLSLSAEFSDLQSQNAQLQTTLELRLSELAEVKSQKHQLNLLSIGKDGEIERLNTELSEL 120
           FLSLSAEFSDLQSQNAQLQTTLELRLSELAEVKSQKHQLNLLSIGKDGEIERLNTELSEL
Sbjct: 61  FLSLSAEFSDLQSQNAQLQTTLELRLSELAEVKSQKHQLNLLSIGKDGEIERLNTELSEL 120

Query: 121 HKSKRQLMKLIEHKDLEISEKDSTIKSYLDKIVNLSETAAQREARISEVDMELVRSRAEF 180
           HKSKRQLM+LIEHKDLEISEKDSTIKSYLDKIVNLSETAAQREARISEVDMELVRSRAEF
Sbjct: 121 HKSKRQLMELIEHKDLEISEKDSTIKSYLDKIVNLSETAAQREARISEVDMELVRSRAEF 180

Query: 181 ARLTQ 186
           ARLTQ
Sbjct: 181 ARLTQ 185

[Close]

BLAST of MELO3C000424 vs. NCBI nr
Match: XP_011659057.1 (nuclear-pore anchor isoform X2 [Cucumis sativus] >KAE8646121.1 hypothetical protein Csa_016255 [Cucumis sativus])

HSP 1 Score: 328.6 bits (841), Expect = 4.0e-86
Identity = 181/185 (97.84%), Postives = 183/185 (98.92%), Query Frame = 0


Query: 1   MAHLFISDEEFSRHSDDAAFLAEKADVFIQGLRSELETVRAQADAASITAEQTCSLLDQK 60
           MAHLFISDEEFSRHSDDAAFLAEKAD FIQGLRSELETVRAQADAASITAEQTCSLLDQK
Sbjct: 1   MAHLFISDEEFSRHSDDAAFLAEKADAFIQGLRSELETVRAQADAASITAEQTCSLLDQK 60

Query: 61  FLSLSAEFSDLQSQNAQLQTTLELRLSELAEVKSQKHQLNLLSIGKDGEIERLNTELSEL 120
           FLSLSAEFSDLQSQNAQLQTTLELRLSELAEVKSQKHQLNLLSIGKDGEIERLNTELSEL
Sbjct: 61  FLSLSAEFSDLQSQNAQLQTTLELRLSELAEVKSQKHQLNLLSIGKDGEIERLNTELSEL 120

Query: 121 HKSKRQLMKLIEHKDLEISEKDSTIKSYLDKIVNLSETAAQREARISEVDMELVRSRAEF 180
           HKSKRQLM+LIEHKDLEI EKDSTIKSYLDKIVNLSETAAQREARISEVDMELVRSRA+F
Sbjct: 121 HKSKRQLMELIEHKDLEIGEKDSTIKSYLDKIVNLSETAAQREARISEVDMELVRSRADF 180

Query: 181 ARLTQ 186
           ARLTQ
Sbjct: 181 ARLTQ 185

[Close]

BLAST of MELO3C000424 vs. NCBI nr
Match: XP_011659056.1 (nuclear-pore anchor isoform X1 [Cucumis sativus])

HSP 1 Score: 328.6 bits (841), Expect = 4.0e-86
Identity = 181/185 (97.84%), Postives = 183/185 (98.92%), Query Frame = 0


Query: 1   MAHLFISDEEFSRHSDDAAFLAEKADVFIQGLRSELETVRAQADAASITAEQTCSLLDQK 60
           MAHLFISDEEFSRHSDDAAFLAEKAD FIQGLRSELETVRAQADAASITAEQTCSLLDQK
Sbjct: 1   MAHLFISDEEFSRHSDDAAFLAEKADAFIQGLRSELETVRAQADAASITAEQTCSLLDQK 60

Query: 61  FLSLSAEFSDLQSQNAQLQTTLELRLSELAEVKSQKHQLNLLSIGKDGEIERLNTELSEL 120
           FLSLSAEFSDLQSQNAQLQTTLELRLSELAEVKSQKHQLNLLSIGKDGEIERLNTELSEL
Sbjct: 61  FLSLSAEFSDLQSQNAQLQTTLELRLSELAEVKSQKHQLNLLSIGKDGEIERLNTELSEL 120

Query: 121 HKSKRQLMKLIEHKDLEISEKDSTIKSYLDKIVNLSETAAQREARISEVDMELVRSRAEF 180
           HKSKRQLM+LIEHKDLEI EKDSTIKSYLDKIVNLSETAAQREARISEVDMELVRSRA+F
Sbjct: 121 HKSKRQLMELIEHKDLEIGEKDSTIKSYLDKIVNLSETAAQREARISEVDMELVRSRADF 180

Query: 181 ARLTQ 186
           ARLTQ
Sbjct: 181 ARLTQ 185

[Close]

BLAST of MELO3C000424 vs. NCBI nr
Match: XP_038887699.1 (nuclear-pore anchor isoform X1 [Benincasa hispida])

HSP 1 Score: 320.5 bits (820), Expect = 1.1e-83
Identity = 176/185 (95.14%), Postives = 181/185 (97.84%), Query Frame = 0


Query: 1   MAHLFISDEEFSRHSDDAAFLAEKADVFIQGLRSELETVRAQADAASITAEQTCSLLDQK 60
           MA+LFISDEEFSRHSDDAAFLAEKAD FIQGLRSELETVRA+ADAASITAEQTCSLLDQK
Sbjct: 1   MAYLFISDEEFSRHSDDAAFLAEKADAFIQGLRSELETVRAEADAASITAEQTCSLLDQK 60

Query: 61  FLSLSAEFSDLQSQNAQLQTTLELRLSELAEVKSQKHQLNLLSIGKDGEIERLNTELSEL 120
           F+SLS EFSDLQSQNAQLQTTLELRLSELAEVKSQKHQLNLLSIGKDGEIERLNTELSEL
Sbjct: 61  FISLSTEFSDLQSQNAQLQTTLELRLSELAEVKSQKHQLNLLSIGKDGEIERLNTELSEL 120

Query: 121 HKSKRQLMKLIEHKDLEISEKDSTIKSYLDKIVNLSETAAQREARISEVDMELVRSRAEF 180
           HKSKRQLM+LIEHKDLEI EKDSTIK YLDKIVNLSETAAQREARISEVDMELVRSRAEF
Sbjct: 121 HKSKRQLMELIEHKDLEIGEKDSTIKCYLDKIVNLSETAAQREARISEVDMELVRSRAEF 180

Query: 181 ARLTQ 186
           ARL+Q
Sbjct: 181 ARLSQ 185

[Close]

BLAST of MELO3C000424 vs. ExPASy Swiss-Prot
Match: A4GSN8 (Nuclear-pore anchor OS=Arabidopsis thaliana OX=3702 GN=NUA PE=1 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 1.6e-53
Identity = 116/183 (63.39%), Postives = 157/183 (85.79%), Query Frame = 0


Query: 4   LFISDEEFSRHSDDAA-FLAEKADVFIQGLRSELETVRAQADAASITAEQTCSLLDQKFL 63
           LF+ DEE +R S DAA  +AE+AD +I+ + +EL++VRA+ADAASITAEQTCSLL+QK+L
Sbjct: 3   LFMPDEELARLSSDAASVVAERADEYIRKIYAELDSVRAKADAASITAEQTCSLLEQKYL 62

Query: 64  SLSAEFSDLQSQNAQLQTTLELRLSELAEVKSQKHQLNLLSIGKDGEIERLNTELSELHK 123
           SLS +FS L+SQNA+LQ+  + RL+ELA+ ++QKHQL+L SI KDGE+ER++TE+SELHK
Sbjct: 63  SLSQDFSSLESQNAKLQSDFDDRLAELAQSQAQKHQLHLQSIEKDGEVERMSTEMSELHK 122

Query: 124 SKRQLMKLIEHKDLEISEKDSTIKSYLDKIVNLSETAAQREARISEVDMELVRSRAEFAR 183
           SKRQLM+L+E KD EISEK+STIKSYLDKIV L++T++++EAR++E   EL RS+A  +R
Sbjct: 123 SKRQLMELLEQKDAEISEKNSTIKSYLDKIVKLTDTSSEKEARLAEATAELARSQAMCSR 182

Query: 184 LTQ 186
           L+Q
Sbjct: 183 LSQ 185

[Close]

BLAST of MELO3C000424 vs. ExPASy TrEMBL
Match: A0A5A7UAA1 (Nuclear-pore anchor isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold986G00730 PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 1.0e-87
Identity = 184/185 (99.46%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MAHLFISDEEFSRHSDDAAFLAEKADVFIQGLRSELETVRAQADAASITAEQTCSLLDQK 60
           MAHLFISDEEFSRHSDDAAFLAEKADVFIQGLRSELETVRAQADAASITAEQTCSLLDQK
Sbjct: 1   MAHLFISDEEFSRHSDDAAFLAEKADVFIQGLRSELETVRAQADAASITAEQTCSLLDQK 60

Query: 61  FLSLSAEFSDLQSQNAQLQTTLELRLSELAEVKSQKHQLNLLSIGKDGEIERLNTELSEL 120
           FLSLSAEFSDLQSQNAQLQTTLELRLSELAEVKSQKHQLNLLSIGKDGEIERLNTELSEL
Sbjct: 61  FLSLSAEFSDLQSQNAQLQTTLELRLSELAEVKSQKHQLNLLSIGKDGEIERLNTELSEL 120

Query: 121 HKSKRQLMKLIEHKDLEISEKDSTIKSYLDKIVNLSETAAQREARISEVDMELVRSRAEF 180
           HKSKRQLM+LIEHKDLEISEKDSTIKSYLDKIVNLSETAAQREARISEVDMELVRSRAEF
Sbjct: 121 HKSKRQLMELIEHKDLEISEKDSTIKSYLDKIVNLSETAAQREARISEVDMELVRSRAEF 180

Query: 181 ARLTQ 186
           ARLTQ
Sbjct: 181 ARLTQ 185

[Close]

BLAST of MELO3C000424 vs. ExPASy TrEMBL
Match: A0A5A7V762 (Nuclear-pore anchor isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold357G00370 PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 1.0e-87
Identity = 184/185 (99.46%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MAHLFISDEEFSRHSDDAAFLAEKADVFIQGLRSELETVRAQADAASITAEQTCSLLDQK 60
           MAHLFISDEEFSRHSDDAAFLAEKADVFIQGLRSELETVRAQADAASITAEQTCSLLDQK
Sbjct: 1   MAHLFISDEEFSRHSDDAAFLAEKADVFIQGLRSELETVRAQADAASITAEQTCSLLDQK 60

Query: 61  FLSLSAEFSDLQSQNAQLQTTLELRLSELAEVKSQKHQLNLLSIGKDGEIERLNTELSEL 120
           FLSLSAEFSDLQSQNAQLQTTLELRLSELAEVKSQKHQLNLLSIGKDGEIERLNTELSEL
Sbjct: 61  FLSLSAEFSDLQSQNAQLQTTLELRLSELAEVKSQKHQLNLLSIGKDGEIERLNTELSEL 120

Query: 121 HKSKRQLMKLIEHKDLEISEKDSTIKSYLDKIVNLSETAAQREARISEVDMELVRSRAEF 180
           HKSKRQLM+LIEHKDLEISEKDSTIKSYLDKIVNLSETAAQREARISEVDMELVRSRAEF
Sbjct: 121 HKSKRQLMELIEHKDLEISEKDSTIKSYLDKIVNLSETAAQREARISEVDMELVRSRAEF 180

Query: 181 ARLTQ 186
           ARLTQ
Sbjct: 181 ARLTQ 185

[Close]

BLAST of MELO3C000424 vs. ExPASy TrEMBL
Match: A0A0A0K927 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G251650 PE=4 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 8.6e-87
Identity = 183/190 (96.32%), Postives = 185/190 (97.37%), Query Frame = 0


Query: 1   MAHLFISDEEFSRHSDDAAFLAEKADVFIQGLRSELETVRAQADAASITAEQTCSLLDQK 60
           MAHLFISDEEFSRHSDDAAFLAEKAD FIQGLRSELETVRAQADAASITAEQTCSLLDQK
Sbjct: 1   MAHLFISDEEFSRHSDDAAFLAEKADAFIQGLRSELETVRAQADAASITAEQTCSLLDQK 60

Query: 61  FLSLSAEFSDLQSQNAQLQTTLELRLSELAEVKSQKHQLNLLSIGKDGEIERLNTELSEL 120
           FLSLSAEFSDLQSQNAQLQTTLELRLSELAEVKSQKHQLNLLSIGKDGEIERLNTELSEL
Sbjct: 61  FLSLSAEFSDLQSQNAQLQTTLELRLSELAEVKSQKHQLNLLSIGKDGEIERLNTELSEL 120

Query: 121 HKSKRQLMKLIEHKDLEISEKDSTIKSYLDKIVNLSETAAQREARISEVDMELVRSRAEF 180
           HKSKRQLM+LIEHKDLEI EKDSTIKSYLDKIVNLSETAAQREARISEVDMELVRSRA+F
Sbjct: 121 HKSKRQLMELIEHKDLEIGEKDSTIKSYLDKIVNLSETAAQREARISEVDMELVRSRADF 180

Query: 181 ARLTQVTTSS 191
           ARLTQ   SS
Sbjct: 181 ARLTQELCSS 190

[Close]

BLAST of MELO3C000424 vs. ExPASy TrEMBL
Match: A0A6J1GLK1 (nuclear-pore anchor isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455457 PE=4 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 2.6e-83
Identity = 175/185 (94.59%), Postives = 180/185 (97.30%), Query Frame = 0


Query: 1   MAHLFISDEEFSRHSDDAAFLAEKADVFIQGLRSELETVRAQADAASITAEQTCSLLDQK 60
           MAHLFISDEEFSRHS+DAAF+AEKAD FIQGL SELETVRAQADAASITAEQTCSLLDQK
Sbjct: 1   MAHLFISDEEFSRHSNDAAFIAEKADAFIQGLYSELETVRAQADAASITAEQTCSLLDQK 60

Query: 61  FLSLSAEFSDLQSQNAQLQTTLELRLSELAEVKSQKHQLNLLSIGKDGEIERLNTELSEL 120
           FLSLSAEFSDLQSQNAQLQTTLELRLSELAEVKSQ HQLNLLSIGKDGEIERLNTELSEL
Sbjct: 61  FLSLSAEFSDLQSQNAQLQTTLELRLSELAEVKSQTHQLNLLSIGKDGEIERLNTELSEL 120

Query: 121 HKSKRQLMKLIEHKDLEISEKDSTIKSYLDKIVNLSETAAQREARISEVDMELVRSRAEF 180
           HKSKRQLM+LIEHKDLEI EKDSTIKSYLDKIVNLSETAAQREARISE+DMELVRSRAEF
Sbjct: 121 HKSKRQLMELIEHKDLEIGEKDSTIKSYLDKIVNLSETAAQREARISEIDMELVRSRAEF 180

Query: 181 ARLTQ 186
           A L+Q
Sbjct: 181 AHLSQ 185

[Close]

BLAST of MELO3C000424 vs. ExPASy TrEMBL
Match: A0A6J1GLY3 (nuclear-pore anchor isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111455457 PE=4 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 2.6e-83
Identity = 175/185 (94.59%), Postives = 180/185 (97.30%), Query Frame = 0


Query: 1   MAHLFISDEEFSRHSDDAAFLAEKADVFIQGLRSELETVRAQADAASITAEQTCSLLDQK 60
           MAHLFISDEEFSRHS+DAAF+AEKAD FIQGL SELETVRAQADAASITAEQTCSLLDQK
Sbjct: 1   MAHLFISDEEFSRHSNDAAFIAEKADAFIQGLYSELETVRAQADAASITAEQTCSLLDQK 60

Query: 61  FLSLSAEFSDLQSQNAQLQTTLELRLSELAEVKSQKHQLNLLSIGKDGEIERLNTELSEL 120
           FLSLSAEFSDLQSQNAQLQTTLELRLSELAEVKSQ HQLNLLSIGKDGEIERLNTELSEL
Sbjct: 61  FLSLSAEFSDLQSQNAQLQTTLELRLSELAEVKSQTHQLNLLSIGKDGEIERLNTELSEL 120

Query: 121 HKSKRQLMKLIEHKDLEISEKDSTIKSYLDKIVNLSETAAQREARISEVDMELVRSRAEF 180
           HKSKRQLM+LIEHKDLEI EKDSTIKSYLDKIVNLSETAAQREARISE+DMELVRSRAEF
Sbjct: 121 HKSKRQLMELIEHKDLEIGEKDSTIKSYLDKIVNLSETAAQREARISEIDMELVRSRAEF 180

Query: 181 ARLTQ 186
           A L+Q
Sbjct: 181 AHLSQ 185

[Close]

BLAST of MELO3C000424 vs. TAIR 10
Match: AT1G79280.1 (nuclear pore anchor )

HSP 1 Score: 210.7 bits (535), Expect = 1.1e-54
Identity = 116/183 (63.39%), Postives = 157/183 (85.79%), Query Frame = 0


Query: 4   LFISDEEFSRHSDDAA-FLAEKADVFIQGLRSELETVRAQADAASITAEQTCSLLDQKFL 63
           LF+ DEE +R S DAA  +AE+AD +I+ + +EL++VRA+ADAASITAEQTCSLL+QK+L
Sbjct: 3   LFMPDEELARLSSDAASVVAERADEYIRKIYAELDSVRAKADAASITAEQTCSLLEQKYL 62

Query: 64  SLSAEFSDLQSQNAQLQTTLELRLSELAEVKSQKHQLNLLSIGKDGEIERLNTELSELHK 123
           SLS +FS L+SQNA+LQ+  + RL+ELA+ ++QKHQL+L SI KDGE+ER++TE+SELHK
Sbjct: 63  SLSQDFSSLESQNAKLQSDFDDRLAELAQSQAQKHQLHLQSIEKDGEVERMSTEMSELHK 122

Query: 124 SKRQLMKLIEHKDLEISEKDSTIKSYLDKIVNLSETAAQREARISEVDMELVRSRAEFAR 183
           SKRQLM+L+E KD EISEK+STIKSYLDKIV L++T++++EAR++E   EL RS+A  +R
Sbjct: 123 SKRQLMELLEQKDAEISEKNSTIKSYLDKIVKLTDTSSEKEARLAEATAELARSQAMCSR 182

Query: 184 LTQ 186
           L+Q
Sbjct: 183 LSQ 185

[Close]

BLAST of MELO3C000424 vs. TAIR 10
Match: AT1G79280.3 (nuclear pore anchor )

HSP 1 Score: 210.7 bits (535), Expect = 1.1e-54
Identity = 116/183 (63.39%), Postives = 157/183 (85.79%), Query Frame = 0


Query: 4   LFISDEEFSRHSDDAA-FLAEKADVFIQGLRSELETVRAQADAASITAEQTCSLLDQKFL 63
           LF+ DEE +R S DAA  +AE+AD +I+ + +EL++VRA+ADAASITAEQTCSLL+QK+L
Sbjct: 3   LFMPDEELARLSSDAASVVAERADEYIRKIYAELDSVRAKADAASITAEQTCSLLEQKYL 62

Query: 64  SLSAEFSDLQSQNAQLQTTLELRLSELAEVKSQKHQLNLLSIGKDGEIERLNTELSELHK 123
           SLS +FS L+SQNA+LQ+  + RL+ELA+ ++QKHQL+L SI KDGE+ER++TE+SELHK
Sbjct: 63  SLSQDFSSLESQNAKLQSDFDDRLAELAQSQAQKHQLHLQSIEKDGEVERMSTEMSELHK 122

Query: 124 SKRQLMKLIEHKDLEISEKDSTIKSYLDKIVNLSETAAQREARISEVDMELVRSRAEFAR 183
           SKRQLM+L+E KD EISEK+STIKSYLDKIV L++T++++EAR++E   EL RS+A  +R
Sbjct: 123 SKRQLMELLEQKDAEISEKNSTIKSYLDKIVKLTDTSSEKEARLAEATAELARSQAMCSR 182

Query: 184 LTQ 186
           L+Q
Sbjct: 183 LSQ 185

[Close]

BLAST of MELO3C000424 vs. TAIR 10
Match: AT1G79280.2 (nuclear pore anchor )

HSP 1 Score: 210.7 bits (535), Expect = 1.1e-54
Identity = 116/183 (63.39%), Postives = 157/183 (85.79%), Query Frame = 0


Query: 4   LFISDEEFSRHSDDAA-FLAEKADVFIQGLRSELETVRAQADAASITAEQTCSLLDQKFL 63
           LF+ DEE +R S DAA  +AE+AD +I+ + +EL++VRA+ADAASITAEQTCSLL+QK+L
Sbjct: 3   LFMPDEELARLSSDAASVVAERADEYIRKIYAELDSVRAKADAASITAEQTCSLLEQKYL 62

Query: 64  SLSAEFSDLQSQNAQLQTTLELRLSELAEVKSQKHQLNLLSIGKDGEIERLNTELSELHK 123
           SLS +FS L+SQNA+LQ+  + RL+ELA+ ++QKHQL+L SI KDGE+ER++TE+SELHK
Sbjct: 63  SLSQDFSSLESQNAKLQSDFDDRLAELAQSQAQKHQLHLQSIEKDGEVERMSTEMSELHK 122

Query: 124 SKRQLMKLIEHKDLEISEKDSTIKSYLDKIVNLSETAAQREARISEVDMELVRSRAEFAR 183
           SKRQLM+L+E KD EISEK+STIKSYLDKIV L++T++++EAR++E   EL RS+A  +R
Sbjct: 123 SKRQLMELLEQKDAEISEKNSTIKSYLDKIVKLTDTSSEKEARLAEATAELARSQAMCSR 182

Query: 184 LTQ 186
           L+Q
Sbjct: 183 LSQ 185

The following BLAST results are available for this feature:

BLAST of MELO3C000424 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0062817.1	2.1e-87	99.46	nuclear-pore anchor isoform X2 [Cucumis melo var. makuwa]	[more]
KAA0051126.1	2.1e-87	99.46	nuclear-pore anchor isoform X2 [Cucumis melo var. makuwa] >TYJ96776.1 nuclear-po...	[more]
XP_011659057.1	4.0e-86	97.84	nuclear-pore anchor isoform X2 [Cucumis sativus] >KAE8646121.1 hypothetical prot...	[more]
XP_011659056.1	4.0e-86	97.84	nuclear-pore anchor isoform X1 [Cucumis sativus]	[more]
XP_038887699.1	1.1e-83	95.14	nuclear-pore anchor isoform X1 [Benincasa hispida]	[more]

BLAST of MELO3C000424 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A4GSN8	1.6e-53	63.39	Nuclear-pore anchor OS=Arabidopsis thaliana OX=3702 GN=NUA PE=1 SV=1	[more]

BLAST of MELO3C000424 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UAA1	1.0e-87	99.46	Nuclear-pore anchor isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A5A7V762	1.0e-87	99.46	Nuclear-pore anchor isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A0A0K927	8.6e-87	96.32	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G251650 PE=4 SV=1	[more]
A0A6J1GLK1	2.6e-83	94.59	nuclear-pore anchor isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455457 PE=...	[more]
A0A6J1GLY3	2.6e-83	94.59	nuclear-pore anchor isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111455457 PE=...	[more]

BLAST of MELO3C000424 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G79280.1	1.1e-54	63.39	nuclear pore anchor	[more]
AT1G79280.3	1.1e-54	63.39	nuclear pore anchor	[more]
AT1G79280.2	1.1e-54	63.39	nuclear pore anchor	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 110..130
None	No IPR available	GENE3D	1.10.287.1490		coord: 22..198 e-value: 5.8E-6 score: 27.7
None	No IPR available	PANTHER	PTHR18898:SF2	NUCLEOPROTEIN TPR	coord: 1..185
None	No IPR available	PANTHER	PTHR18898	NUCLEOPROTEIN TPR-RELATED	coord: 1..185

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C000424.1	MELO3C000424.1	mRNA