MELO3C000424 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CAGCAAATTAGAAGTTAAAAAGTTAAAATTCATCCAGCCATGATTAGGGTTAAGAACCTTTCCCCCCAAATAGAAAGGTGAAAAGTTACACATTTATGAAAATTCGGGTTATGTGAGACAGAAGCATTCCCCTCTCATATTACCTTTTCCGCTTCTTTCCTTTCCAACTCCCTCCAGAAAACCATTCATACCTTCTCTCCGTGGTATATTAGCCCGCAGTTGATCTGCGCCGGGCATTTTGTACCGCAAATCCAGCTAAAATGGCCCATTTATTCATCTCCGACGAGGAGTTCTCTCGTCACTCCGACGACGCTGCTTTTCTGGCCGAGAAGGCCGATGTCTTCATCCAAGGTCTCCGCAGCGAGCTCGAGACCGTCAGAGCCCAAGCTGATGCTGCTTCAATCACTGCGGAGCAAACTTGTTCTCTTCTTGACCAGAAGTTCCTCTCTCTTTCAGCTGAGTTCTCTGACCTCCAGTCTCAGAATGCACAGCTTCAAACGACCCTCGAACTCAGGCTCTCCGAGCTTGCGGAAGTCAAGTCCCAAAAACACCAACTCAATTTACTTTCCGTAAGAATGCTATTTCCTTTTTTCTCTCTTTCATTCATTTCGTTTACGCACATGTAATGAATCCCTCCATTTACACCTCCTTTCGTTAATATTAAATATTTTAAGCATTGGCTTCTTTGGTGCTTACAGATTGGGAAGGATGGTGAGATAGAGAGGTTAAATACAGAGTTATCTGAACTGCATAAATCAAAAAGACAGTTAATGAAGCTTATCGAGCATAAGGACTTAGAAATTAGTGAAAAAGATTCCACTATAAAGAGTTATCTTGACAAGATTGTAAGTTCCTTTCACTACTCCGACTTCCCATCCTTGTAATGAAAGATGTGGTAATAATTACAATTTGTGCTTTCCTACTAAAAATGTTTCGTTCTGATCGTTTTGGAGGTCAATTTGTCCGAGACAGCTGCTCAAAGAGAAGCCCGTATAAGCGAGGTCGACATGGAGTTGGTGCGTTCCCGGGCTGAATTCGCTCGCCTTACACAGGTGACCACTTCCTCACTATTGTCTTTGTTAAGAAACCGATTCACTTCAGACATTTGGATTTTATAA CAGCAAATTAGAAGTTAAAAAGTTAAAATTCATCCAGCCATGATTAGGGTTAAGAACCTTTCCCCCCAAATAGAAAGGTGAAAAGTTACACATTTATGAAAATTCGGGTTATGTGAGACAGAAGCATTCCCCTCTCATATTACCTTTTCCGCTTCTTTCCTTTCCAACTCCCTCCAGAAAACCATTCATACCTTCTCTCCGTGGTATATTAGCCCGCAGTTGATCTGCGCCGGGCATTTTGTACCGCAAATCCAGCTAAAATGGCCCATTTATTCATCTCCGACGAGGAGTTCTCTCGTCACTCCGACGACGCTGCTTTTCTGGCCGAGAAGGCCGATGTCTTCATCCAAGGTCTCCGCAGCGAGCTCGAGACCGTCAGAGCCCAAGCTGATGCTGCTTCAATCACTGCGGAGCAAACTTGTTCTCTTCTTGACCAGAAGTTCCTCTCTCTTTCAGCTGAGTTCTCTGACCTCCAGTCTCAGAATGCACAGCTTCAAACGACCCTCGAACTCAGGCTCTCCGAGCTTGCGGAAGTCAAGTCCCAAAAACACCAACTCAATTTACTTTCCATTGGGAAGGATGGTGAGATAGAGAGGTTAAATACAGAGTTATCTGAACTGCATAAATCAAAAAGACAGTTAATGAAGCTTATCGAGCATAAGGACTTAGAAATTAGTGAAAAAGATTCCACTATAAAGAGTTATCTTGACAAGATTGTCAATTTGTCCGAGACAGCTGCTCAAAGAGAAGCCCGTATAAGCGAGGTCGACATGGAGTTGGTGCGTTCCCGGGCTGAATTCGCTCGCCTTACACAGGTGACCACTTCCTCACTATTGTCTTTGTTAAGAAACCGATTCACTTCAGACATTTGGATTTTATAA ATGGCCCATTTATTCATCTCCGACGAGGAGTTCTCTCGTCACTCCGACGACGCTGCTTTTCTGGCCGAGAAGGCCGATGTCTTCATCCAAGGTCTCCGCAGCGAGCTCGAGACCGTCAGAGCCCAAGCTGATGCTGCTTCAATCACTGCGGAGCAAACTTGTTCTCTTCTTGACCAGAAGTTCCTCTCTCTTTCAGCTGAGTTCTCTGACCTCCAGTCTCAGAATGCACAGCTTCAAACGACCCTCGAACTCAGGCTCTCCGAGCTTGCGGAAGTCAAGTCCCAAAAACACCAACTCAATTTACTTTCCATTGGGAAGGATGGTGAGATAGAGAGGTTAAATACAGAGTTATCTGAACTGCATAAATCAAAAAGACAGTTAATGAAGCTTATCGAGCATAAGGACTTAGAAATTAGTGAAAAAGATTCCACTATAAAGAGTTATCTTGACAAGATTGTCAATTTGTCCGAGACAGCTGCTCAAAGAGAAGCCCGTATAAGCGAGGTCGACATGGAGTTGGTGCGTTCCCGGGCTGAATTCGCTCGCCTTACACAGGTGACCACTTCCTCACTATTGTCTTTGTTAAGAAACCGATTCACTTCAGACATTTGGATTTTATAA MAHLFISDEEFSRHSDDAAFLAEKADVFIQGLRSELETVRAQADAASITAEQTCSLLDQKFLSLSAEFSDLQSQNAQLQTTLELRLSELAEVKSQKHQLNLLSIGKDGEIERLNTELSELHKSKRQLMKLIEHKDLEISEKDSTIKSYLDKIVNLSETAAQREARISEVDMELVRSRAEFARLTQVTTSSLLSLLRNRFTSDIWIL Homology
BLAST of MELO3C000424 vs. NCBI nr
Match: KAA0062817.1 (nuclear-pore anchor isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 332.8 bits (852), Expect = 2.1e-87 Identity = 184/185 (99.46%), Postives = 185/185 (100.00%), Query Frame = 0
BLAST of MELO3C000424 vs. NCBI nr
Match: KAA0051126.1 (nuclear-pore anchor isoform X2 [Cucumis melo var. makuwa] >TYJ96776.1 nuclear-pore anchor isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 332.8 bits (852), Expect = 2.1e-87 Identity = 184/185 (99.46%), Postives = 185/185 (100.00%), Query Frame = 0
BLAST of MELO3C000424 vs. NCBI nr
Match: XP_011659057.1 (nuclear-pore anchor isoform X2 [Cucumis sativus] >KAE8646121.1 hypothetical protein Csa_016255 [Cucumis sativus]) HSP 1 Score: 328.6 bits (841), Expect = 4.0e-86 Identity = 181/185 (97.84%), Postives = 183/185 (98.92%), Query Frame = 0
BLAST of MELO3C000424 vs. NCBI nr
Match: XP_011659056.1 (nuclear-pore anchor isoform X1 [Cucumis sativus]) HSP 1 Score: 328.6 bits (841), Expect = 4.0e-86 Identity = 181/185 (97.84%), Postives = 183/185 (98.92%), Query Frame = 0
BLAST of MELO3C000424 vs. NCBI nr
Match: XP_038887699.1 (nuclear-pore anchor isoform X1 [Benincasa hispida]) HSP 1 Score: 320.5 bits (820), Expect = 1.1e-83 Identity = 176/185 (95.14%), Postives = 181/185 (97.84%), Query Frame = 0
BLAST of MELO3C000424 vs. ExPASy Swiss-Prot
Match: A4GSN8 (Nuclear-pore anchor OS=Arabidopsis thaliana OX=3702 GN=NUA PE=1 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 1.6e-53 Identity = 116/183 (63.39%), Postives = 157/183 (85.79%), Query Frame = 0
BLAST of MELO3C000424 vs. ExPASy TrEMBL
Match: A0A5A7UAA1 (Nuclear-pore anchor isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold986G00730 PE=4 SV=1) HSP 1 Score: 332.8 bits (852), Expect = 1.0e-87 Identity = 184/185 (99.46%), Postives = 185/185 (100.00%), Query Frame = 0
BLAST of MELO3C000424 vs. ExPASy TrEMBL
Match: A0A5A7V762 (Nuclear-pore anchor isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold357G00370 PE=4 SV=1) HSP 1 Score: 332.8 bits (852), Expect = 1.0e-87 Identity = 184/185 (99.46%), Postives = 185/185 (100.00%), Query Frame = 0
BLAST of MELO3C000424 vs. ExPASy TrEMBL
Match: A0A0A0K927 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G251650 PE=4 SV=1) HSP 1 Score: 329.7 bits (844), Expect = 8.6e-87 Identity = 183/190 (96.32%), Postives = 185/190 (97.37%), Query Frame = 0
BLAST of MELO3C000424 vs. ExPASy TrEMBL
Match: A0A6J1GLK1 (nuclear-pore anchor isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455457 PE=4 SV=1) HSP 1 Score: 318.2 bits (814), Expect = 2.6e-83 Identity = 175/185 (94.59%), Postives = 180/185 (97.30%), Query Frame = 0
BLAST of MELO3C000424 vs. ExPASy TrEMBL
Match: A0A6J1GLY3 (nuclear-pore anchor isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111455457 PE=4 SV=1) HSP 1 Score: 318.2 bits (814), Expect = 2.6e-83 Identity = 175/185 (94.59%), Postives = 180/185 (97.30%), Query Frame = 0
BLAST of MELO3C000424 vs. TAIR 10
Match: AT1G79280.1 (nuclear pore anchor ) HSP 1 Score: 210.7 bits (535), Expect = 1.1e-54 Identity = 116/183 (63.39%), Postives = 157/183 (85.79%), Query Frame = 0
BLAST of MELO3C000424 vs. TAIR 10
Match: AT1G79280.3 (nuclear pore anchor ) HSP 1 Score: 210.7 bits (535), Expect = 1.1e-54 Identity = 116/183 (63.39%), Postives = 157/183 (85.79%), Query Frame = 0
BLAST of MELO3C000424 vs. TAIR 10
Match: AT1G79280.2 (nuclear pore anchor ) HSP 1 Score: 210.7 bits (535), Expect = 1.1e-54 Identity = 116/183 (63.39%), Postives = 157/183 (85.79%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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