MELO3C000296 (gene) Melon (DHL92) v4

Overview


Name	MELO3C000296
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	DnaJ-like protein subfamily B member 4
Location	chr01: 8737929 .. 8738103 (-)
RNA-Seq Expression	MELO3C000296
Synteny	MELO3C000296

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGTAGATTATTACAATATATTGAAGGTGAACAGGAACGCCAATGACGATGATCTCAAAAAGGCGTATAGAAGATTGGCTATGAAATGGCATCCTGATAAAAACCCCAACAACAAAAAAGAAGCTGAAACCAAATTCAAGCAGATCTCCGAGGCCTATGAGGCAAGATTTT

mRNA sequence

ATGGGAGTAGATTATTACAATATATTGAAGGTGAACAGGAACGCCAATGACGATGATCTCAAAAAGGCGTATAGAAGATTGGCTATGAAATGGCATCCTGATAAAAACCCCAACAACAAAAAAGAAGCTGAAACCAAATTCAAGCAGATCTCCGAGGCCTATGAGGCAAGATTTT

Coding sequence (CDS)

ATGGGAGTAGATTATTACAATATATTGAAGGTGAACAGGAACGCCAATGACGATGATCTCAAAAAGGCGTATAGAAGATTGGCTATGAAATGGCATCCTGATAAAAACCCCAACAACAAAAAAGAAGCTGAAACCAAATTCAAGCAGATCTCCGAGGCCTATGAGGCAAGATTT

Protein sequence

MGVDYYNILKVNRNANDDDLKKAYRRLAMKWHPDKNPNNKKEAETKFKQISEAYEARF

Homology

[Close]

BLAST of MELO3C000296 vs. NCBI nr
Match: TYK31410.1 (dnaJ-like protein subfamily B member 4 [Cucumis melo var. makuwa])

HSP 1 Score: 121.3 bits (303), Expect = 2.7e-24
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0


Query: 1  MGVDYYNILKVNRNANDDDLKKAYRRLAMKWHPDKNPNNKKEAETKFKQISEAYEARF 59
          MGVDYYNILKVNRNANDDDLKKAYRRLAMKWHPDKNPNNKKEAETKFKQISEAYEARF
Sbjct: 1  MGVDYYNILKVNRNANDDDLKKAYRRLAMKWHPDKNPNNKKEAETKFKQISEAYEARF 58

[Close]

BLAST of MELO3C000296 vs. NCBI nr
Match: KAA0038790.1 (dnaJ-like protein subfamily B member 4 [Cucumis melo var. makuwa])

HSP 1 Score: 121.3 bits (303), Expect = 2.7e-24
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0


Query: 1  MGVDYYNILKVNRNANDDDLKKAYRRLAMKWHPDKNPNNKKEAETKFKQISEAYEARF 59
          MGVDYYNILKVNRNANDDDLKKAYRRLAMKWHPDKNPNNKKEAETKFKQISEAYEARF
Sbjct: 1  MGVDYYNILKVNRNANDDDLKKAYRRLAMKWHPDKNPNNKKEAETKFKQISEAYEARF 58

[Close]

BLAST of MELO3C000296 vs. NCBI nr
Match: XP_038898720.1 (dnaJ homolog subfamily B member 1 [Benincasa hispida])

HSP 1 Score: 115.5 bits (288), Expect = 1.5e-22
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0


Query: 1  MGVDYYNILKVNRNANDDDLKKAYRRLAMKWHPDKNPNNKKEAETKFKQISEAYE 56
          MGVDYYNILKVNRNANDDDLKKAYRRLAMKWHPDKNPNNKKEAETKFKQISEAYE
Sbjct: 1  MGVDYYNILKVNRNANDDDLKKAYRRLAMKWHPDKNPNNKKEAETKFKQISEAYE 55

[Close]

BLAST of MELO3C000296 vs. NCBI nr
Match: XP_008466370.1 (PREDICTED: dnaJ homolog subfamily B member 4 [Cucumis melo])

HSP 1 Score: 115.5 bits (288), Expect = 1.5e-22
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0


Query: 1  MGVDYYNILKVNRNANDDDLKKAYRRLAMKWHPDKNPNNKKEAETKFKQISEAYE 56
          MGVDYYNILKVNRNANDDDLKKAYRRLAMKWHPDKNPNNKKEAETKFKQISEAYE
Sbjct: 1  MGVDYYNILKVNRNANDDDLKKAYRRLAMKWHPDKNPNNKKEAETKFKQISEAYE 55

[Close]

BLAST of MELO3C000296 vs. NCBI nr
Match: XP_004136336.1 (dnaJ homolog subfamily B member 1 [Cucumis sativus] >KGN60126.1 hypothetical protein Csa_001601 [Cucumis sativus])

HSP 1 Score: 114.4 bits (285), Expect = 3.3e-22
Identity = 54/55 (98.18%), Postives = 55/55 (100.00%), Query Frame = 0


Query: 1  MGVDYYNILKVNRNANDDDLKKAYRRLAMKWHPDKNPNNKKEAETKFKQISEAYE 56
          MGVDYYNILKVNRNANDDDLKKAYR+LAMKWHPDKNPNNKKEAETKFKQISEAYE
Sbjct: 1  MGVDYYNILKVNRNANDDDLKKAYRKLAMKWHPDKNPNNKKEAETKFKQISEAYE 55

[Close]

BLAST of MELO3C000296 vs. ExPASy Swiss-Prot
Match: Q5XGU5 (DnaJ homolog subfamily B member 6-B OS=Xenopus laevis OX=8355 GN=dnajb6-b PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 3.7e-16
Identity = 36/53 (67.92%), Postives = 49/53 (92.45%), Query Frame = 0


Query: 3  VDYYNILKVNRNANDDDLKKAYRRLAMKWHPDKNPNNKKEAETKFKQISEAYE 56
          V+YY++L V RN++ DD+KKAYRRLA+KWHPDKNP+NK+EAE +FK+++EAYE
Sbjct: 2  VEYYDVLGVQRNSSPDDIKKAYRRLALKWHPDKNPDNKEEAERRFKEVAEAYE 54

[Close]

BLAST of MELO3C000296 vs. ExPASy Swiss-Prot
Match: Q5FWN8 (DnaJ homolog subfamily B member 6-A OS=Xenopus laevis OX=8355 GN=dnajb6-a PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 4.8e-16
Identity = 37/53 (69.81%), Postives = 47/53 (88.68%), Query Frame = 0


Query: 3  VDYYNILKVNRNANDDDLKKAYRRLAMKWHPDKNPNNKKEAETKFKQISEAYE 56
          V+YY +L V RNA+ DD+KKAYRRLA+KWHPDKNP+NK EAE +FK+++EAYE
Sbjct: 2  VEYYEVLGVQRNASADDIKKAYRRLALKWHPDKNPDNKDEAERRFKEVAEAYE 54

[Close]

BLAST of MELO3C000296 vs. ExPASy Swiss-Prot
Match: O75190 (DnaJ homolog subfamily B member 6 OS=Homo sapiens OX=9606 GN=DNAJB6 PE=1 SV=2)

HSP 1 Score: 84.3 bits (207), Expect = 4.8e-16
Identity = 37/53 (69.81%), Postives = 47/53 (88.68%), Query Frame = 0


Query: 3  VDYYNILKVNRNANDDDLKKAYRRLAMKWHPDKNPNNKKEAETKFKQISEAYE 56
          VDYY +L V R+A+ +D+KKAYR+LA+KWHPDKNP NK+EAE KFKQ++EAYE
Sbjct: 2  VDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYE 54

[Close]

BLAST of MELO3C000296 vs. ExPASy Swiss-Prot
Match: Q4R7Y5 (DnaJ homolog subfamily B member 6 OS=Macaca fascicularis OX=9541 GN=DNAJB6 PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 4.8e-16
Identity = 37/53 (69.81%), Postives = 47/53 (88.68%), Query Frame = 0


Query: 3  VDYYNILKVNRNANDDDLKKAYRRLAMKWHPDKNPNNKKEAETKFKQISEAYE 56
          VDYY +L V R+A+ +D+KKAYR+LA+KWHPDKNP NK+EAE KFKQ++EAYE
Sbjct: 2  VDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYE 54

[Close]

BLAST of MELO3C000296 vs. ExPASy Swiss-Prot
Match: Q5R8H0 (DnaJ homolog subfamily B member 6 OS=Pongo abelii OX=9601 GN=DNAJB6 PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 4.8e-16
Identity = 37/53 (69.81%), Postives = 47/53 (88.68%), Query Frame = 0


Query: 3  VDYYNILKVNRNANDDDLKKAYRRLAMKWHPDKNPNNKKEAETKFKQISEAYE 56
          VDYY +L V R+A+ +D+KKAYR+LA+KWHPDKNP NK+EAE KFKQ++EAYE
Sbjct: 2  VDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYE 54

[Close]

BLAST of MELO3C000296 vs. ExPASy TrEMBL
Match: A0A5D3E701 (DnaJ-like protein subfamily B member 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007190 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.3e-24
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0


Query: 1  MGVDYYNILKVNRNANDDDLKKAYRRLAMKWHPDKNPNNKKEAETKFKQISEAYEARF 59
          MGVDYYNILKVNRNANDDDLKKAYRRLAMKWHPDKNPNNKKEAETKFKQISEAYEARF
Sbjct: 1  MGVDYYNILKVNRNANDDDLKKAYRRLAMKWHPDKNPNNKKEAETKFKQISEAYEARF 58

[Close]

BLAST of MELO3C000296 vs. ExPASy TrEMBL
Match: A0A5A7T6C0 (DnaJ-like protein subfamily B member 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G003450 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.3e-24
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0


Query: 1  MGVDYYNILKVNRNANDDDLKKAYRRLAMKWHPDKNPNNKKEAETKFKQISEAYEARF 59
          MGVDYYNILKVNRNANDDDLKKAYRRLAMKWHPDKNPNNKKEAETKFKQISEAYEARF
Sbjct: 1  MGVDYYNILKVNRNANDDDLKKAYRRLAMKWHPDKNPNNKKEAETKFKQISEAYEARF 58

[Close]

BLAST of MELO3C000296 vs. ExPASy TrEMBL
Match: A0A1S3CR26 (dnaJ homolog subfamily B member 4 OS=Cucumis melo OX=3656 GN=LOC103503797 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 7.2e-23
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0


Query: 1  MGVDYYNILKVNRNANDDDLKKAYRRLAMKWHPDKNPNNKKEAETKFKQISEAYE 56
          MGVDYYNILKVNRNANDDDLKKAYRRLAMKWHPDKNPNNKKEAETKFKQISEAYE
Sbjct: 1  MGVDYYNILKVNRNANDDDLKKAYRRLAMKWHPDKNPNNKKEAETKFKQISEAYE 55

[Close]

BLAST of MELO3C000296 vs. ExPASy TrEMBL
Match: A0A0A0LJC9 (J domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G878950 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.6e-22
Identity = 54/55 (98.18%), Postives = 55/55 (100.00%), Query Frame = 0


Query: 1  MGVDYYNILKVNRNANDDDLKKAYRRLAMKWHPDKNPNNKKEAETKFKQISEAYE 56
          MGVDYYNILKVNRNANDDDLKKAYR+LAMKWHPDKNPNNKKEAETKFKQISEAYE
Sbjct: 1  MGVDYYNILKVNRNANDDDLKKAYRKLAMKWHPDKNPNNKKEAETKFKQISEAYE 55

[Close]

BLAST of MELO3C000296 vs. ExPASy TrEMBL
Match: A0A6J1FQ10 (dnaJ homolog subfamily B member 4-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446207 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.7e-22
Identity = 54/55 (98.18%), Postives = 55/55 (100.00%), Query Frame = 0


Query: 1  MGVDYYNILKVNRNANDDDLKKAYRRLAMKWHPDKNPNNKKEAETKFKQISEAYE 56
          MGVDYYNILKVNRNANDDDLKKAYRRLAMKWHPDKNPN+KKEAETKFKQISEAYE
Sbjct: 1  MGVDYYNILKVNRNANDDDLKKAYRRLAMKWHPDKNPNSKKEAETKFKQISEAYE 55

[Close]

BLAST of MELO3C000296 vs. TAIR 10
Match: AT1G10350.1 (DNAJ heat shock family protein )

HSP 1 Score: 104.4 bits (259), Expect = 3.2e-23
Identity = 47/55 (85.45%), Postives = 53/55 (96.36%), Query Frame = 0


Query: 1  MGVDYYNILKVNRNANDDDLKKAYRRLAMKWHPDKNPNNKKEAETKFKQISEAYE 56
          MGVDYYN+LKVNRNAN+DDLKK+YRR+AMKWHPDKNP +KKEAE KFKQISEAY+
Sbjct: 1  MGVDYYNVLKVNRNANEDDLKKSYRRMAMKWHPDKNPTSKKEAEAKFKQISEAYD 55

[Close]

BLAST of MELO3C000296 vs. TAIR 10
Match: AT5G25530.1 (DNAJ heat shock family protein )

HSP 1 Score: 103.2 bits (256), Expect = 7.1e-23
Identity = 47/58 (81.03%), Postives = 54/58 (93.10%), Query Frame = 0


Query: 1  MGVDYYNILKVNRNANDDDLKKAYRRLAMKWHPDKNPNNKKEAETKFKQISEAYEARF 59
          MG+DYY+ILKVNRNA +DDLKK+YR+LAMKWHPDKNPN K EAE KFKQISEAYEA++
Sbjct: 1  MGLDYYDILKVNRNATEDDLKKSYRKLAMKWHPDKNPNTKTEAEAKFKQISEAYEAKY 58

[Close]

BLAST of MELO3C000296 vs. TAIR 10
Match: AT4G28480.1 (DNAJ heat shock family protein )

HSP 1 Score: 102.1 bits (253), Expect = 1.6e-22
Identity = 46/55 (83.64%), Postives = 53/55 (96.36%), Query Frame = 0


Query: 1  MGVDYYNILKVNRNANDDDLKKAYRRLAMKWHPDKNPNNKKEAETKFKQISEAYE 56
          MGVDYY +L+V+R+ANDDDLKKAYR+LAMKWHPDKNPNNKK+AE KFKQISEAY+
Sbjct: 1  MGVDYYKVLQVDRSANDDDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYD 55

[Close]

BLAST of MELO3C000296 vs. TAIR 10
Match: AT4G28480.2 (DNAJ heat shock family protein )

HSP 1 Score: 102.1 bits (253), Expect = 1.6e-22
Identity = 46/55 (83.64%), Postives = 53/55 (96.36%), Query Frame = 0


Query: 1  MGVDYYNILKVNRNANDDDLKKAYRRLAMKWHPDKNPNNKKEAETKFKQISEAYE 56
          MGVDYY +L+V+R+ANDDDLKKAYR+LAMKWHPDKNPNNKK+AE KFKQISEAY+
Sbjct: 1  MGVDYYKVLQVDRSANDDDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYD 55

[Close]

BLAST of MELO3C000296 vs. TAIR 10
Match: AT3G08910.1 (DNAJ heat shock family protein )

HSP 1 Score: 101.7 bits (252), Expect = 2.1e-22
Identity = 46/55 (83.64%), Postives = 52/55 (94.55%), Query Frame = 0


Query: 1  MGVDYYNILKVNRNANDDDLKKAYRRLAMKWHPDKNPNNKKEAETKFKQISEAYE 56
          MGVDYY +L+V+RNA DDDLKKAYR+LAMKWHPDKNPNNKK+AE KFKQISEAY+
Sbjct: 1  MGVDYYKVLQVDRNAKDDDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYD 55

The following BLAST results are available for this feature:

BLAST of MELO3C000296 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK31410.1	2.7e-24	100.00	dnaJ-like protein subfamily B member 4 [Cucumis melo var. makuwa]	[more]
KAA0038790.1	2.7e-24	100.00	dnaJ-like protein subfamily B member 4 [Cucumis melo var. makuwa]	[more]
XP_038898720.1	1.5e-22	100.00	dnaJ homolog subfamily B member 1 [Benincasa hispida]	[more]
XP_008466370.1	1.5e-22	100.00	PREDICTED: dnaJ homolog subfamily B member 4 [Cucumis melo]	[more]
XP_004136336.1	3.3e-22	98.18	dnaJ homolog subfamily B member 1 [Cucumis sativus] >KGN60126.1 hypothetical pro...	[more]

BLAST of MELO3C000296 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5XGU5	3.7e-16	67.92	DnaJ homolog subfamily B member 6-B OS=Xenopus laevis OX=8355 GN=dnajb6-b PE=2 S...	[more]
Q5FWN8	4.8e-16	69.81	DnaJ homolog subfamily B member 6-A OS=Xenopus laevis OX=8355 GN=dnajb6-a PE=2 S...	[more]
O75190	4.8e-16	69.81	DnaJ homolog subfamily B member 6 OS=Homo sapiens OX=9606 GN=DNAJB6 PE=1 SV=2	[more]
Q4R7Y5	4.8e-16	69.81	DnaJ homolog subfamily B member 6 OS=Macaca fascicularis OX=9541 GN=DNAJB6 PE=2 ...	[more]
Q5R8H0	4.8e-16	69.81	DnaJ homolog subfamily B member 6 OS=Pongo abelii OX=9601 GN=DNAJB6 PE=2 SV=1	[more]

BLAST of MELO3C000296 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E701	1.3e-24	100.00	DnaJ-like protein subfamily B member 4 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A5A7T6C0	1.3e-24	100.00	DnaJ-like protein subfamily B member 4 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3CR26	7.2e-23	100.00	dnaJ homolog subfamily B member 4 OS=Cucumis melo OX=3656 GN=LOC103503797 PE=4 S...	[more]
A0A0A0LJC9	1.6e-22	98.18	J domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G878950 PE=4 SV=1	[more]
A0A6J1FQ10	2.7e-22	98.18	dnaJ homolog subfamily B member 4-like isoform X1 OS=Cucurbita moschata OX=3662 ...	[more]

BLAST of MELO3C000296 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10350.1	3.2e-23	85.45	DNAJ heat shock family protein	[more]
AT5G25530.1	7.1e-23	81.03	DNAJ heat shock family protein	[more]
AT4G28480.1	1.6e-22	83.64	DNAJ heat shock family protein	[more]
AT4G28480.2	1.6e-22	83.64	DNAJ heat shock family protein	[more]
AT3G08910.1	2.1e-22	83.64	DNAJ heat shock family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001623	DnaJ domain	PRINTS	PR00625	JDOMAIN	coord: 24..39 score: 58.71 coord: 42..58 score: 38.86 coord: 6..24 score: 47.16
IPR001623	DnaJ domain	SMART	SM00271	dnaj_3	coord: 3..57 e-value: 7.2E-21 score: 85.3
IPR001623	DnaJ domain	PFAM	PF00226	DnaJ	coord: 4..55 e-value: 1.3E-22 score: 79.6
IPR001623	DnaJ domain	PROSITE	PS50076	DNAJ_2	coord: 4..58 score: 17.679625
IPR001623	DnaJ domain	CDD	cd06257	DnaJ	coord: 4..55 e-value: 9.6897E-21 score: 74.1189
IPR036869	Chaperone J-domain superfamily	GENE3D	1.10.287.110	DnaJ domain	coord: 4..57 e-value: 1.5E-24 score: 87.5
IPR036869	Chaperone J-domain superfamily	SUPERFAMILY	46565	Chaperone J-domain	coord: 3..55
None	No IPR available	PANTHER	PTHR24078	DNAJ HOMOLOG SUBFAMILY C MEMBER	coord: 1..55
None	No IPR available	PANTHER	PTHR24078:SF524	DNAJ HEAT SHOCK FAMILY PROTEIN	coord: 1..55

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C000296.1	MELO3C000296.1	mRNA