MELO3C000249 (gene) Melon (DHL92) v4

Overview


Name	MELO3C000249
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Importin subunit beta-1
Location	chr09: 23755212 .. 23755649 (-)
RNA-Seq Expression	MELO3C000249
Synteny	MELO3C000249

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATTGGAGGTTACGCAAGTTCTTCTCAATGCACAGTCTATCGATGCAACTGTGAGGAAGCAGGCAGAAGACAGTTTAAGGCAATTTCAGGAGCAAAACCTTCCCAGCTTTTTGCTGTCTCTCTCTAGTGAATTAGGAAGTGAGGAAAAGCCGGTCGACAGTCGTAAATTGGCAGGTCTGATATTGAAGAATGCACTGGATGCAAAGGAACAACATAGAAAATTTGAGCTCGTTCAGAGATGGCTATCGCTGGATAGCAATGTGAAGACCCAGATAAAGGCATGCTTGTTGAATACACTGTCTTCAGCAGTAGCTGATGCGAGGTCCACAGCATCCCAGGTCATTGCAAAGATTGCGGGTATTGAGTTGCCTCATAAGCAATGGCCTGAATTGATAGGTTCACTATTGTTAAATGTTCACCAACAATCGTCCCAT

mRNA sequence

ATGGCATTGGAGGTTACGCAAGTTCTTCTCAATGCACAGTCTATCGATGCAACTGTGAGGAAGCAGGCAGAAGACAGTTTAAGGCAATTTCAGGAGCAAAACCTTCCCAGCTTTTTGCTGTCTCTCTCTAGTGAATTAGGAAGTGAGGAAAAGCCGGTCGACAGTCGTAAATTGGCAGGTCTGATATTGAAGAATGCACTGGATGCAAAGGAACAACATAGAAAATTTGAGCTCGTTCAGAGATGGCTATCGCTGGATAGCAATGTGAAGACCCAGATAAAGGCATGCTTGTTGAATACACTGTCTTCAGCAGTAGCTGATGCGAGGTCCACAGCATCCCAGGTCATTGCAAAGATTGCGGGTATTGAGTTGCCTCATAAGCAATGGCCTGAATTGATAGGTTCACTATTGTTAAATGTTCACCAACAATCGTCCCAT

Coding sequence (CDS)

ATGGCATTGGAGGTTACGCAAGTTCTTCTCAATGCACAGTCTATCGATGCAACTGTGAGGAAGCAGGCAGAAGACAGTTTAAGGCAATTTCAGGAGCAAAACCTTCCCAGCTTTTTGCTGTCTCTCTCTAGTGAATTAGGAAGTGAGGAAAAGCCGGTCGACAGTCGTAAATTGGCAGGTCTGATATTGAAGAATGCACTGGATGCAAAGGAACAACATAGAAAATTTGAGCTCGTTCAGAGATGGCTATCGCTGGATAGCAATGTGAAGACCCAGATAAAGGCATGCTTGTTGAATACACTGTCTTCAGCAGTAGCTGATGCGAGGTCCACAGCATCCCAGGTCATTGCAAAGATTGCGGGTATTGAGTTGCCTCATAAGCAATGGCCTGAATTGATAGGTTCACTATTGTTAAATGTTCACCAACAATCGTCCCAT

Protein sequence

MALEVTQVLLNAQSIDATVRKQAEDSLRQFQEQNLPSFLLSLSSELGSEEKPVDSRKLAGLILKNALDAKEQHRKFELVQRWLSLDSNVKTQIKACLLNTLSSAVADARSTASQVIAKIAGIELPHKQWPELIGSLLLNVHQQSSH

Homology

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BLAST of MELO3C000249 vs. NCBI nr
Match: KAA0042540.1 (importin subunit beta-1 [Cucumis melo var. makuwa] >TYK05943.1 importin subunit beta-1 [Cucumis melo var. makuwa])

HSP 1 Score: 273.5 bits (698), Expect = 1.1e-69
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MALEVTQVLLNAQSIDATVRKQAEDSLRQFQEQNLPSFLLSLSSELGSEEKPVDSRKLAG 60
           MALEVTQVLLNAQSIDATVRKQAEDSLRQFQEQNLPSFLLSLSSELGSEEKPVDSRKLAG
Sbjct: 1   MALEVTQVLLNAQSIDATVRKQAEDSLRQFQEQNLPSFLLSLSSELGSEEKPVDSRKLAG 60

Query: 61  LILKNALDAKEQHRKFELVQRWLSLDSNVKTQIKACLLNTLSSAVADARSTASQVIAKIA 120
           LILKNALDAKEQHRKFELVQRWLSLDSNVKTQIKACLLNTLSSAVADARSTASQVIAKIA
Sbjct: 61  LILKNALDAKEQHRKFELVQRWLSLDSNVKTQIKACLLNTLSSAVADARSTASQVIAKIA 120

Query: 121 GIELPHKQWPELIGSLLLNVHQQSSH 147
           GIELPHKQWPELIGSLLLNVHQQSSH
Sbjct: 121 GIELPHKQWPELIGSLLLNVHQQSSH 146

[Close]

BLAST of MELO3C000249 vs. NCBI nr
Match: KAA0042542.1 (importin subunit beta-1 [Cucumis melo var. makuwa] >TYK05945.1 importin subunit beta-1 [Cucumis melo var. makuwa])

HSP 1 Score: 273.5 bits (698), Expect = 1.1e-69
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MALEVTQVLLNAQSIDATVRKQAEDSLRQFQEQNLPSFLLSLSSELGSEEKPVDSRKLAG 60
           MALEVTQVLLNAQSIDATVRKQAEDSLRQFQEQNLPSFLLSLSSELGSEEKPVDSRKLAG
Sbjct: 1   MALEVTQVLLNAQSIDATVRKQAEDSLRQFQEQNLPSFLLSLSSELGSEEKPVDSRKLAG 60

Query: 61  LILKNALDAKEQHRKFELVQRWLSLDSNVKTQIKACLLNTLSSAVADARSTASQVIAKIA 120
           LILKNALDAKEQHRKFELVQRWLSLDSNVKTQIKACLLNTLSSAVADARSTASQVIAKIA
Sbjct: 61  LILKNALDAKEQHRKFELVQRWLSLDSNVKTQIKACLLNTLSSAVADARSTASQVIAKIA 120

Query: 121 GIELPHKQWPELIGSLLLNVHQQSSH 147
           GIELPHKQWPELIGSLLLNVHQQSSH
Sbjct: 121 GIELPHKQWPELIGSLLLNVHQQSSH 146

[Close]

BLAST of MELO3C000249 vs. NCBI nr
Match: XP_004145935.3 (importin subunit beta-1 [Cucumis sativus] >KAE8647800.1 hypothetical protein Csa_000463 [Cucumis sativus])

HSP 1 Score: 270.8 bits (691), Expect = 7.0e-69
Identity = 144/146 (98.63%), Postives = 145/146 (99.32%), Query Frame = 0


Query: 1   MALEVTQVLLNAQSIDATVRKQAEDSLRQFQEQNLPSFLLSLSSELGSEEKPVDSRKLAG 60
           MALEVTQVLLNAQSIDATVRKQAEDSLRQFQEQNLPSFLLSLS+ELGSEEKPVDSRKLAG
Sbjct: 1   MALEVTQVLLNAQSIDATVRKQAEDSLRQFQEQNLPSFLLSLSNELGSEEKPVDSRKLAG 60

Query: 61  LILKNALDAKEQHRKFELVQRWLSLDSNVKTQIKACLLNTLSSAVADARSTASQVIAKIA 120
           LILKNALDAKEQHRKFELVQRWLSLD NVKTQIKACLLNTLSSAVADARSTASQVIAKIA
Sbjct: 61  LILKNALDAKEQHRKFELVQRWLSLDGNVKTQIKACLLNTLSSAVADARSTASQVIAKIA 120

Query: 121 GIELPHKQWPELIGSLLLNVHQQSSH 147
           GIELPHKQWPELIGSLLLNVHQQSSH
Sbjct: 121 GIELPHKQWPELIGSLLLNVHQQSSH 146

[Close]

BLAST of MELO3C000249 vs. NCBI nr
Match: XP_011654605.2 (importin subunit beta-1 [Cucumis sativus] >KAE8647799.1 hypothetical protein Csa_000700 [Cucumis sativus])

HSP 1 Score: 270.8 bits (691), Expect = 7.0e-69
Identity = 144/146 (98.63%), Postives = 145/146 (99.32%), Query Frame = 0


Query: 1   MALEVTQVLLNAQSIDATVRKQAEDSLRQFQEQNLPSFLLSLSSELGSEEKPVDSRKLAG 60
           MALEVTQVLLNAQSIDATVRKQAEDSLRQFQEQNLPSFLLSLS+ELGSEEKPVDSRKLAG
Sbjct: 1   MALEVTQVLLNAQSIDATVRKQAEDSLRQFQEQNLPSFLLSLSNELGSEEKPVDSRKLAG 60

Query: 61  LILKNALDAKEQHRKFELVQRWLSLDSNVKTQIKACLLNTLSSAVADARSTASQVIAKIA 120
           LILKNALDAKEQHRKFELVQRWLSLD NVKTQIKACLLNTLSSAVADARSTASQVIAKIA
Sbjct: 61  LILKNALDAKEQHRKFELVQRWLSLDGNVKTQIKACLLNTLSSAVADARSTASQVIAKIA 120

Query: 121 GIELPHKQWPELIGSLLLNVHQQSSH 147
           GIELPHKQWPELIGSLLLNVHQQSSH
Sbjct: 121 GIELPHKQWPELIGSLLLNVHQQSSH 146

[Close]

BLAST of MELO3C000249 vs. NCBI nr
Match: XP_038906523.1 (importin subunit beta-1-like [Benincasa hispida])

HSP 1 Score: 268.5 bits (685), Expect = 3.5e-68
Identity = 142/146 (97.26%), Postives = 144/146 (98.63%), Query Frame = 0


Query: 1   MALEVTQVLLNAQSIDATVRKQAEDSLRQFQEQNLPSFLLSLSSELGSEEKPVDSRKLAG 60
           MALEVTQVLLNAQSIDA+ RKQAEDSLRQFQEQNLPSFLLSLS ELGSEEKPVDSRKLAG
Sbjct: 1   MALEVTQVLLNAQSIDASARKQAEDSLRQFQEQNLPSFLLSLSGELGSEEKPVDSRKLAG 60

Query: 61  LILKNALDAKEQHRKFELVQRWLSLDSNVKTQIKACLLNTLSSAVADARSTASQVIAKIA 120
           LILKNALDAKEQHRKFEL+QRWLSLDSNVKTQIKACLLNTLSSAVADARSTASQVIAKIA
Sbjct: 61  LILKNALDAKEQHRKFELIQRWLSLDSNVKTQIKACLLNTLSSAVADARSTASQVIAKIA 120

Query: 121 GIELPHKQWPELIGSLLLNVHQQSSH 147
           GIELPHKQWPELIGSLLLNVHQQSSH
Sbjct: 121 GIELPHKQWPELIGSLLLNVHQQSSH 146

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BLAST of MELO3C000249 vs. ExPASy Swiss-Prot
Match: Q9FJD4 (Importin subunit beta-1 OS=Arabidopsis thaliana OX=3702 GN=KPNB1 PE=1 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 1.7e-54
Identity = 110/146 (75.34%), Postives = 128/146 (87.67%), Query Frame = 0


Query: 1   MALEVTQVLLNAQSIDATVRKQAEDSLRQFQEQNLPSFLLSLSSELGSEEKPVDSRKLAG 60
           MA+EVTQ+L+NAQSID TVRK AE+SL+QFQEQNL  FLLSL+ EL ++EKPVDSRKLAG
Sbjct: 1   MAMEVTQLLINAQSIDGTVRKHAEESLKQFQEQNLAGFLLSLAGELANDEKPVDSRKLAG 60

Query: 61  LILKNALDAKEQHRKFELVQRWLSLDSNVKTQIKACLLNTLSSAVADARSTASQVIAKIA 120
           L+LKNALDAKEQHRK+ELVQRWL+LD + K+QI+A LL TLS+ V D RSTASQVIAK+A
Sbjct: 61  LVLKNALDAKEQHRKYELVQRWLALDMSTKSQIRAFLLKTLSAPVPDVRSTASQVIAKVA 120

Query: 121 GIELPHKQWPELIGSLLLNVHQQSSH 147
           GIELP KQWPELI SLL N+HQ  +H
Sbjct: 121 GIELPQKQWPELIVSLLSNIHQLPAH 146

[Close]

BLAST of MELO3C000249 vs. ExPASy Swiss-Prot
Match: O13864 (Importin subunit beta-1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=kap95 PE=3 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 4.2e-16
Identity = 51/134 (38.06%), Postives = 74/134 (55.22%), Query Frame = 0


Query: 7   QVLLNAQSIDATVRKQAEDSLRQFQEQNLPSFLLSLSSELGSEEKPVDSRKLAGLILKNA 66
           + L    S DA VR  AE  L      +   +++ L+ EL ++      R  AGL LKNA
Sbjct: 5   EFLAQTLSPDANVRLNAEKQLENAARTDFAQYMVLLAQELANDNSMPYIRMAAGLALKNA 64

Query: 67  LDAKEQHRKFELVQRWLSLDSNVKTQIKACLLNTLSSAVADARSTASQVIAKIAGIELPH 126
           + A+E+ RK E  Q W SL   +K Q+K+  L TL S+   A  +A+Q++A IA  EL  
Sbjct: 65  ITAREEARKLEYQQLWQSLPVEIKQQVKSLALQTLGSSEHQAGQSAAQLVAAIAAYELAT 124

Query: 127 KQWPELIGSLLLNV 141
            QWP+L+ +L+ NV
Sbjct: 125 NQWPDLMVTLVANV 138

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BLAST of MELO3C000249 vs. ExPASy Swiss-Prot
Match: Q14974 (Importin subunit beta-1 OS=Homo sapiens OX=9606 GN=KPNB1 PE=1 SV=2)

HSP 1 Score: 80.5 bits (197), Expect = 1.7e-14
Identity = 52/143 (36.36%), Postives = 81/143 (56.64%), Query Frame = 0


Query: 3   LEVTQVLLNAQSIDATVRKQAEDSLRQFQEQNLPSFLLSLSSELGSEEKPVDSRKLAGLI 62
           +E+  +L    S D    + A+  L +   +NLP+FL+ LS  L +      +R  AGL 
Sbjct: 1   MELITILEKTVSPDRLELEAAQKFLERAAVENLPTFLVELSRVLANPGNSQVARVAAGLQ 60

Query: 63  LKNALDAKEQHRKFELVQRWLSLDSNVKTQIKACLLNTLSSAVADARSTASQVIAKIAGI 122
           +KN+L +K+   K +  QRWL++D+N + ++K  +L TL +      S+ASQ +A IA  
Sbjct: 61  IKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLQTLGTETY-RPSSASQCVAGIACA 120

Query: 123 ELPHKQWPELIGSLLLNVHQQSS 146
           E+P  QWPELI  L+ NV   +S
Sbjct: 121 EIPVNQWPELIPQLVANVTNPNS 142

[Close]

BLAST of MELO3C000249 vs. ExPASy Swiss-Prot
Match: P70168 (Importin subunit beta-1 OS=Mus musculus OX=10090 GN=Kpnb1 PE=1 SV=2)

HSP 1 Score: 80.5 bits (197), Expect = 1.7e-14
Identity = 52/143 (36.36%), Postives = 81/143 (56.64%), Query Frame = 0


Query: 3   LEVTQVLLNAQSIDATVRKQAEDSLRQFQEQNLPSFLLSLSSELGSEEKPVDSRKLAGLI 62
           +E+  +L    S D    + A+  L +   +NLP+FL+ LS  L +      +R  AGL 
Sbjct: 1   MELITILEKTVSPDRLELEAAQKFLERAAVENLPTFLVELSRVLANPGNSQVARVAAGLQ 60

Query: 63  LKNALDAKEQHRKFELVQRWLSLDSNVKTQIKACLLNTLSSAVADARSTASQVIAKIAGI 122
           +KN+L +K+   K +  QRWL++D+N + ++K  +L TL +      S+ASQ +A IA  
Sbjct: 61  IKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLQTLGTETY-RPSSASQCVAGIACA 120

Query: 123 ELPHKQWPELIGSLLLNVHQQSS 146
           E+P  QWPELI  L+ NV   +S
Sbjct: 121 EIPVSQWPELIPQLVANVTNPNS 142

[Close]

BLAST of MELO3C000249 vs. ExPASy Swiss-Prot
Match: P52297 (Importin subunit beta OS=Xenopus laevis OX=8355 GN=kpnb1 PE=1 SV=3)

HSP 1 Score: 75.5 bits (184), Expect = 5.6e-13
Identity = 49/143 (34.27%), Postives = 80/143 (55.94%), Query Frame = 0


Query: 3   LEVTQVLLNAQSIDATVRKQAEDSLRQFQEQNLPSFLLSLSSELGSEEKPVDSRKLAGLI 62
           +E+  +L    S D    + A+  L Q   +NLP+F++ LS  L +      +R  AGL 
Sbjct: 1   MELVTILEKTVSPDRNELEAAQKFLEQAAVENLPTFVVELSKVLANPANSQVARVAAGLQ 60

Query: 63  LKNALDAKEQHRKFELVQRWLSLDSNVKTQIKACLLNTLSSAVADARSTASQVIAKIAGI 122
           +KN L +++   K +  QRWL++D++ + +IK  +L TL +  +   S+ASQ +A IA  
Sbjct: 61  IKNPLTSRDPDVKAQYQQRWLAIDASARGEIKTYVLRTLGTE-SYRPSSASQCVAGIACA 120

Query: 123 ELPHKQWPELIGSLLLNVHQQSS 146
           E+   QWP+LI  L+ NV   +S
Sbjct: 121 EITVNQWPQLIPQLVANVTDPNS 142

[Close]

BLAST of MELO3C000249 vs. ExPASy TrEMBL
Match: A0A5A7TGT4 (Importin subunit beta-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00360 PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 5.2e-70
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MALEVTQVLLNAQSIDATVRKQAEDSLRQFQEQNLPSFLLSLSSELGSEEKPVDSRKLAG 60
           MALEVTQVLLNAQSIDATVRKQAEDSLRQFQEQNLPSFLLSLSSELGSEEKPVDSRKLAG
Sbjct: 1   MALEVTQVLLNAQSIDATVRKQAEDSLRQFQEQNLPSFLLSLSSELGSEEKPVDSRKLAG 60

Query: 61  LILKNALDAKEQHRKFELVQRWLSLDSNVKTQIKACLLNTLSSAVADARSTASQVIAKIA 120
           LILKNALDAKEQHRKFELVQRWLSLDSNVKTQIKACLLNTLSSAVADARSTASQVIAKIA
Sbjct: 61  LILKNALDAKEQHRKFELVQRWLSLDSNVKTQIKACLLNTLSSAVADARSTASQVIAKIA 120

Query: 121 GIELPHKQWPELIGSLLLNVHQQSSH 147
           GIELPHKQWPELIGSLLLNVHQQSSH
Sbjct: 121 GIELPHKQWPELIGSLLLNVHQQSSH 146

[Close]

BLAST of MELO3C000249 vs. ExPASy TrEMBL
Match: A0A5A7TGL2 (Importin subunit beta-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00380 PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 5.2e-70
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MALEVTQVLLNAQSIDATVRKQAEDSLRQFQEQNLPSFLLSLSSELGSEEKPVDSRKLAG 60
           MALEVTQVLLNAQSIDATVRKQAEDSLRQFQEQNLPSFLLSLSSELGSEEKPVDSRKLAG
Sbjct: 1   MALEVTQVLLNAQSIDATVRKQAEDSLRQFQEQNLPSFLLSLSSELGSEEKPVDSRKLAG 60

Query: 61  LILKNALDAKEQHRKFELVQRWLSLDSNVKTQIKACLLNTLSSAVADARSTASQVIAKIA 120
           LILKNALDAKEQHRKFELVQRWLSLDSNVKTQIKACLLNTLSSAVADARSTASQVIAKIA
Sbjct: 61  LILKNALDAKEQHRKFELVQRWLSLDSNVKTQIKACLLNTLSSAVADARSTASQVIAKIA 120

Query: 121 GIELPHKQWPELIGSLLLNVHQQSSH 147
           GIELPHKQWPELIGSLLLNVHQQSSH
Sbjct: 121 GIELPHKQWPELIGSLLLNVHQQSSH 146

[Close]

BLAST of MELO3C000249 vs. ExPASy TrEMBL
Match: A0A0A0KJT4 (Importin N-terminal domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G139310 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 3.4e-69
Identity = 144/146 (98.63%), Postives = 145/146 (99.32%), Query Frame = 0


Query: 1   MALEVTQVLLNAQSIDATVRKQAEDSLRQFQEQNLPSFLLSLSSELGSEEKPVDSRKLAG 60
           MALEVTQVLLNAQSIDATVRKQAEDSLRQFQEQNLPSFLLSLS+ELGSEEKPVDSRKLAG
Sbjct: 1   MALEVTQVLLNAQSIDATVRKQAEDSLRQFQEQNLPSFLLSLSNELGSEEKPVDSRKLAG 60

Query: 61  LILKNALDAKEQHRKFELVQRWLSLDSNVKTQIKACLLNTLSSAVADARSTASQVIAKIA 120
           LILKNALDAKEQHRKFELVQRWLSLD NVKTQIKACLLNTLSSAVADARSTASQVIAKIA
Sbjct: 61  LILKNALDAKEQHRKFELVQRWLSLDGNVKTQIKACLLNTLSSAVADARSTASQVIAKIA 120

Query: 121 GIELPHKQWPELIGSLLLNVHQQSSH 147
           GIELPHKQWPELIGSLLLNVHQQSSH
Sbjct: 121 GIELPHKQWPELIGSLLLNVHQQSSH 146

[Close]

BLAST of MELO3C000249 vs. ExPASy TrEMBL
Match: A0A0A0KQ48 (Importin N-terminal domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G139290 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 3.4e-69
Identity = 144/146 (98.63%), Postives = 145/146 (99.32%), Query Frame = 0


Query: 1   MALEVTQVLLNAQSIDATVRKQAEDSLRQFQEQNLPSFLLSLSSELGSEEKPVDSRKLAG 60
           MALEVTQVLLNAQSIDATVRKQAEDSLRQFQEQNLPSFLLSLS+ELGSEEKPVDSRKLAG
Sbjct: 1   MALEVTQVLLNAQSIDATVRKQAEDSLRQFQEQNLPSFLLSLSNELGSEEKPVDSRKLAG 60

Query: 61  LILKNALDAKEQHRKFELVQRWLSLDSNVKTQIKACLLNTLSSAVADARSTASQVIAKIA 120
           LILKNALDAKEQHRKFELVQRWLSLD NVKTQIKACLLNTLSSAVADARSTASQVIAKIA
Sbjct: 61  LILKNALDAKEQHRKFELVQRWLSLDGNVKTQIKACLLNTLSSAVADARSTASQVIAKIA 120

Query: 121 GIELPHKQWPELIGSLLLNVHQQSSH 147
           GIELPHKQWPELIGSLLLNVHQQSSH
Sbjct: 121 GIELPHKQWPELIGSLLLNVHQQSSH 146

[Close]

BLAST of MELO3C000249 vs. ExPASy TrEMBL
Match: A0A6J1K098 (importin subunit beta-1-like OS=Cucurbita maxima OX=3661 GN=LOC111491288 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 1.6e-66
Identity = 138/146 (94.52%), Postives = 142/146 (97.26%), Query Frame = 0


Query: 1   MALEVTQVLLNAQSIDATVRKQAEDSLRQFQEQNLPSFLLSLSSELGSEEKPVDSRKLAG 60
           MALEVTQVLLNAQSIDATVRKQAEDSLRQFQEQNLP FLLSLS ELG+EEKPVDSRKLAG
Sbjct: 1   MALEVTQVLLNAQSIDATVRKQAEDSLRQFQEQNLPIFLLSLSGELGNEEKPVDSRKLAG 60

Query: 61  LILKNALDAKEQHRKFELVQRWLSLDSNVKTQIKACLLNTLSSAVADARSTASQVIAKIA 120
           LILKNALDAKEQHRKFEL+QRWLSLDSNVKTQIK CLLNTLSSA+ADARST+SQVIAKIA
Sbjct: 61  LILKNALDAKEQHRKFELIQRWLSLDSNVKTQIKTCLLNTLSSAIADARSTSSQVIAKIA 120

Query: 121 GIELPHKQWPELIGSLLLNVHQQSSH 147
           GIELPHKQW ELIGSLLLNVHQQSSH
Sbjct: 121 GIELPHKQWSELIGSLLLNVHQQSSH 146

[Close]

BLAST of MELO3C000249 vs. TAIR 10
Match: AT5G53480.1 (ARM repeat superfamily protein )

HSP 1 Score: 213.4 bits (542), Expect = 1.2e-55
Identity = 110/146 (75.34%), Postives = 128/146 (87.67%), Query Frame = 0


Query: 1   MALEVTQVLLNAQSIDATVRKQAEDSLRQFQEQNLPSFLLSLSSELGSEEKPVDSRKLAG 60
           MA+EVTQ+L+NAQSID TVRK AE+SL+QFQEQNL  FLLSL+ EL ++EKPVDSRKLAG
Sbjct: 1   MAMEVTQLLINAQSIDGTVRKHAEESLKQFQEQNLAGFLLSLAGELANDEKPVDSRKLAG 60

Query: 61  LILKNALDAKEQHRKFELVQRWLSLDSNVKTQIKACLLNTLSSAVADARSTASQVIAKIA 120
           L+LKNALDAKEQHRK+ELVQRWL+LD + K+QI+A LL TLS+ V D RSTASQVIAK+A
Sbjct: 61  LVLKNALDAKEQHRKYELVQRWLALDMSTKSQIRAFLLKTLSAPVPDVRSTASQVIAKVA 120

Query: 121 GIELPHKQWPELIGSLLLNVHQQSSH 147
           GIELP KQWPELI SLL N+HQ  +H
Sbjct: 121 GIELPQKQWPELIVSLLSNIHQLPAH 146

[Close]

BLAST of MELO3C000249 vs. TAIR 10
Match: AT3G08943.1 (ARM repeat superfamily protein )

HSP 1 Score: 168.3 bits (425), Expect = 4.5e-42
Identity = 89/145 (61.38%), Postives = 114/145 (78.62%), Query Frame = 0


Query: 1   MALEVTQVLLNAQSIDATVRKQAEDSLRQFQEQNLPSFLLSLSSELGSEEKPVDSRKLAG 60
           MA+E+TQ LL AQS DA VR +AE SLRQFQEQNLP FLLSLS EL + +KP +SR+LAG
Sbjct: 1   MAMEITQFLLAAQSADARVRTEAEASLRQFQEQNLPLFLLSLSFELENNDKPAESRRLAG 60

Query: 61  LILKNALDAKEQHRKFELVQRWLSLDSNVKTQIKACLLNTLSSAVADARSTASQVIAKIA 120
           ++LKN+LDAK+   K  LV++W ++D  +K+QIK  LL TL S+  +AR T++QVIAK+A
Sbjct: 61  ILLKNSLDAKDSATKDHLVKQWFAIDVALKSQIKDRLLRTLGSSALEARHTSAQVIAKVA 120

Query: 121 GIELPHKQWPELIGSLLLNVHQQSS 146
            IE+P KQWPEL+GSLL N+ QQ S
Sbjct: 121 SIEIPQKQWPELVGSLLNNMTQQGS 145

[Close]

BLAST of MELO3C000249 vs. TAIR 10
Match: AT3G08947.1 (ARM repeat superfamily protein )

HSP 1 Score: 167.2 bits (422), Expect = 1.0e-41
Identity = 87/145 (60.00%), Postives = 114/145 (78.62%), Query Frame = 0


Query: 1   MALEVTQVLLNAQSIDATVRKQAEDSLRQFQEQNLPSFLLSLSSELGSEEKPVDSRKLAG 60
           MA+E+TQ LL AQS DA VR +AE +LRQFQEQNLP FL+SLS EL + +KP +SR+LAG
Sbjct: 1   MAMEITQFLLAAQSADARVRTEAEGNLRQFQEQNLPLFLVSLSFELANNDKPAESRRLAG 60

Query: 61  LILKNALDAKEQHRKFELVQRWLSLDSNVKTQIKACLLNTLSSAVADARSTASQVIAKIA 120
           ++LKN+LDAK+   K  LV++W ++D  +K+QIK  LL TL S+  +AR T++QVIAK+A
Sbjct: 61  ILLKNSLDAKDSATKDHLVKQWFAIDVALKSQIKDRLLRTLGSSALEARHTSAQVIAKVA 120

Query: 121 GIELPHKQWPELIGSLLLNVHQQSS 146
            IE+P KQWPEL+GSLL N+ QQ S
Sbjct: 121 SIEIPQKQWPELVGSLLNNMTQQGS 145

The following BLAST results are available for this feature:

BLAST of MELO3C000249 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0042540.1	1.1e-69	100.00	importin subunit beta-1 [Cucumis melo var. makuwa] >TYK05943.1 importin subunit ...	[more]
KAA0042542.1	1.1e-69	100.00	importin subunit beta-1 [Cucumis melo var. makuwa] >TYK05945.1 importin subunit ...	[more]
XP_004145935.3	7.0e-69	98.63	importin subunit beta-1 [Cucumis sativus] >KAE8647800.1 hypothetical protein Csa...	[more]
XP_011654605.2	7.0e-69	98.63	importin subunit beta-1 [Cucumis sativus] >KAE8647799.1 hypothetical protein Csa...	[more]
XP_038906523.1	3.5e-68	97.26	importin subunit beta-1-like [Benincasa hispida]	[more]

BLAST of MELO3C000249 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJD4	1.7e-54	75.34	Importin subunit beta-1 OS=Arabidopsis thaliana OX=3702 GN=KPNB1 PE=1 SV=1	[more]
O13864	4.2e-16	38.06	Importin subunit beta-1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) O...	[more]
Q14974	1.7e-14	36.36	Importin subunit beta-1 OS=Homo sapiens OX=9606 GN=KPNB1 PE=1 SV=2	[more]
P70168	1.7e-14	36.36	Importin subunit beta-1 OS=Mus musculus OX=10090 GN=Kpnb1 PE=1 SV=2	[more]
P52297	5.6e-13	34.27	Importin subunit beta OS=Xenopus laevis OX=8355 GN=kpnb1 PE=1 SV=3	[more]

BLAST of MELO3C000249 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TGT4	5.2e-70	100.00	Importin subunit beta-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TGL2	5.2e-70	100.00	Importin subunit beta-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0KJT4	3.4e-69	98.63	Importin N-terminal domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_...	[more]
A0A0A0KQ48	3.4e-69	98.63	Importin N-terminal domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_...	[more]
A0A6J1K098	1.6e-66	94.52	importin subunit beta-1-like OS=Cucurbita maxima OX=3661 GN=LOC111491288 PE=4 SV...	[more]

BLAST of MELO3C000249 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53480.1	1.2e-55	75.34	ARM repeat superfamily protein	[more]
AT3G08943.1	4.5e-42	61.38	ARM repeat superfamily protein	[more]
AT3G08947.1	1.0e-41	60.00	ARM repeat superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001494	Importin-beta, N-terminal domain	SMART	SM00913	IBN_N_2	coord: 23..103 e-value: 2.2E-9 score: 47.1
IPR001494	Importin-beta, N-terminal domain	PFAM	PF03810	IBN_N	coord: 23..102 e-value: 1.5E-14 score: 53.7
IPR001494	Importin-beta, N-terminal domain	PROSITE	PS50166	IMPORTIN_B_NT	coord: 23..103 score: 17.152384
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 1..146 e-value: 1.3E-49 score: 171.1
IPR040122	Importin beta family	PANTHER	PTHR10527	IMPORTIN BETA	coord: 3..146
IPR027140	Importin subunit beta-1, plants	PANTHER	PTHR10527:SF68	IMPORTIN SUBUNIT BETA-1	coord: 3..146
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 4..143

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C000249.1	MELO3C000249.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0006606	protein import into nucleus
molecular_function	GO:0031267	small GTPase binding