MELO3C000247 (gene) Melon (DHL92) v4

Overview
NameMELO3C000247
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionNAC domain-containing protein
Locationchr01: 9563727 .. 9564096 (+)
RNA-Seq ExpressionMELO3C000247
SyntenyMELO3C000247
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAGAAGGTTGGGTCGTTTGTAGGGCATTCAGAAAACCAAGCCCTAATCAAAACCAAGTCATTGGACCTTGGAATAGCTATCAACATCAAGCTTTATACTACGATCTCAAAAACAACAACAATAACAATAATAGTCAGTTTGTTAGGTCCCCTTCATTTTCAGATGCCATGACCCCTCACACTAACATGGTCAACTCTTCAGACCAACACCTCTCAAATTTTCACCAGGCATATGGCTCCGATCTTGGCCACCACCAACAACAAAATTACCAATTCGTCCAGCTCCCGAATCTCGAGAGCCCGACACTCTCGACAAGCTTCGGAACCAACGAAACAAAGATAAATAATAACAACAACAATAATCACAACG

mRNA sequence

GAAGAAGGTTGGGTCGTTTGTAGGGCATTCAGAAAACCAAGCCCTAATCAAAACCAAGTCATTGGACCTTGGAATAGCTATCAACATCAAGCTTTATACTACGATCTCAAAAACAACAACAATAACAATAATAGTCAGTTTGTTAGGTCCCCTTCATTTTCAGATGCCATGACCCCTCACACTAACATGGTCAACTCTTCAGACCAACACCTCTCAAATTTTCACCAGGCATATGGCTCCGATCTTGGCCACCACCAACAACAAAATTACCAATTCGTCCAGCTCCCGAATCTCGAGAGCCCGACACTCTCGACAAGCTTCGGAACCAACGAAACAAAGATAAATAATAACAACAACAATAATCACAACG

Coding sequence (CDS)

GAAGAAGGTTGGGTCGTTTGTAGGGCATTCAGAAAACCAAGCCCTAATCAAAACCAAGTCATTGGACCTTGGAATAGCTATCAACATCAAGCTTTATACTACGATCTCAAAAACAACAACAATAACAATAATAGTCAGTTTGTTAGGTCCCCTTCATTTTCAGATGCCATGACCCCTCACACTAACATGGTCAACTCTTCAGACCAACACCTCTCAAATTTTCACCAGGCATATGGCTCCGATCTTGGCCACCACCAACAACAAAATTACCAATTCGTCCAGCTCCCGAATCTCGAGAGCCCGACACTCTCGACAAGCTTCGGAACCAACGAAACAAAGATAAATAATAACAACAACAATAATCACAAC

Protein sequence

EEGWVVCRAFRKPSPNQNQVIGPWNSYQHQALYYDLKNNNNNNNSQFVRSPSFSDAMTPHTNMVNSSDQHLSNFHQAYGSDLGHHQQQNYQFVQLPNLESPTLSTSFGTNETKINNNNNNNHN
Homology
BLAST of MELO3C000247 vs. NCBI nr
Match: KAA0032930.1 (NAC domain-containing protein 30 [Cucumis melo var. makuwa] >TYJ97449.1 NAC domain-containing protein 30 [Cucumis melo var. makuwa])

HSP 1 Score: 252.7 bits (644), Expect = 1.7e-63
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0

Query: 1   EEGWVVCRAFRKPSPNQNQVIGPWNSYQHQALYYDLKNNNNNNNSQFVRSPSFSDAMTPH 60
           EEGWVVCRAFRKPSPNQNQVIGPWNSYQHQALYYDLKNNNNNNNSQFVRSPSFSDAMTPH
Sbjct: 3   EEGWVVCRAFRKPSPNQNQVIGPWNSYQHQALYYDLKNNNNNNNSQFVRSPSFSDAMTPH 62

Query: 61  TNMVNSSDQHLSNFHQAYGSDLGHHQQQNYQFVQLPNLESPTLSTSFGTNETKINNNNNN 120
           TNMVNSSDQHLSNFHQAYGSDLGHHQQQNYQFVQLPNLESPTLSTSFGTNETKINNNNNN
Sbjct: 63  TNMVNSSDQHLSNFHQAYGSDLGHHQQQNYQFVQLPNLESPTLSTSFGTNETKINNNNNN 122

Query: 121 NHN 124
           NHN
Sbjct: 123 NHN 125

BLAST of MELO3C000247 vs. NCBI nr
Match: XP_004149423.1 (NAC domain-containing protein 30 [Cucumis sativus])

HSP 1 Score: 220.3 bits (560), Expect = 9.1e-54
Identity = 113/124 (91.13%), Postives = 119/124 (95.97%), Query Frame = 0

Query: 1   EEGWVVCRAFRKPSPNQNQVIGPWNSYQHQALYYDLKNNNNNNNSQFVR-SPSFSDAMTP 60
           EEGWVVCRAF+KPSPNQNQVIGPWNSYQHQALYYDLK NNNNNNSQF R SPSFSDAMTP
Sbjct: 146 EEGWVVCRAFKKPSPNQNQVIGPWNSYQHQALYYDLK-NNNNNNSQFARSSPSFSDAMTP 205

Query: 61  HTNMVNSSDQHLSNFHQAYGSDLGHHQQQNYQFVQLPNLESPTLSTSFGTNETKINNNNN 120
           HT+M+NSSDQHLSNFHQ+YGSDL HH+QQNYQFVQLPNLESPTLSTSFGTNETKINNNN+
Sbjct: 206 HTHMLNSSDQHLSNFHQSYGSDL-HHKQQNYQFVQLPNLESPTLSTSFGTNETKINNNND 265

Query: 121 NNHN 124
           NN N
Sbjct: 266 NNPN 267

BLAST of MELO3C000247 vs. NCBI nr
Match: KAE8646149.1 (hypothetical protein Csa_015564 [Cucumis sativus])

HSP 1 Score: 216.9 bits (551), Expect = 1.0e-52
Identity = 111/123 (90.24%), Postives = 118/123 (95.93%), Query Frame = 0

Query: 2   EGWVVCRAFRKPSPNQNQVIGPWNSYQHQALYYDLKNNNNNNNSQFVR-SPSFSDAMTPH 61
           +GWVVCRAF+KPSPNQNQVIGPWNSYQHQALYYDLK NNNNNNSQF R SPSFSDAMTPH
Sbjct: 147 KGWVVCRAFKKPSPNQNQVIGPWNSYQHQALYYDLK-NNNNNNSQFARSSPSFSDAMTPH 206

Query: 62  TNMVNSSDQHLSNFHQAYGSDLGHHQQQNYQFVQLPNLESPTLSTSFGTNETKINNNNNN 121
           T+M+NSSDQHLSNFHQ+YGSDL HH+QQNYQFVQLPNLESPTLSTSFGTNETKINNNN+N
Sbjct: 207 THMLNSSDQHLSNFHQSYGSDL-HHKQQNYQFVQLPNLESPTLSTSFGTNETKINNNNDN 266

Query: 122 NHN 124
           N N
Sbjct: 267 NPN 267

BLAST of MELO3C000247 vs. NCBI nr
Match: XP_038899845.1 (NAC domain-containing protein 30-like [Benincasa hispida])

HSP 1 Score: 195.7 bits (496), Expect = 2.4e-46
Identity = 98/122 (80.33%), Postives = 110/122 (90.16%), Query Frame = 0

Query: 1   EEGWVVCRAFRKPSPNQNQVIGPWNSYQHQALYYDLKNNNNNNNSQFVRSPSFSDAMTPH 60
           EEGWVVCRAF+KP+PNQNQVIG WNS+QHQAL+YDL+ NNN+NNSQFVRSPSFSDAMTPH
Sbjct: 146 EEGWVVCRAFKKPNPNQNQVIGAWNSHQHQALHYDLR-NNNSNNSQFVRSPSFSDAMTPH 205

Query: 61  TNMVNSSDQHLSNFHQAYGSDLGHH---QQQNYQFVQLPNLESPTLSTSFGTNETKINNN 120
           T MVNSSDQ LSN H +Y  DL HH   QQQ+Y+F+QLPNLESPTLSTSFGTNETKINNN
Sbjct: 206 TQMVNSSDQQLSNLHHSYAFDLHHHQLQQQQDYRFIQLPNLESPTLSTSFGTNETKINNN 265

BLAST of MELO3C000247 vs. NCBI nr
Match: XP_023554182.1 (NAC domain-containing protein 30-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 149.1 bits (375), Expect = 2.6e-32
Identity = 85/121 (70.25%), Postives = 94/121 (77.69%), Query Frame = 0

Query: 1   EEGWVVCRAFRKPSPNQNQVIGPWNSYQHQALYYDLKNNNNNNNSQFVRSPSFSDAMTPH 60
           EEGWVVCRAF+KPSP QNQ IG WNSYQHQALYYDLKNNNNN+        +FSDAM P 
Sbjct: 146 EEGWVVCRAFKKPSPTQNQAIGAWNSYQHQALYYDLKNNNNNS--------TFSDAMIP- 205

Query: 61  TNMVNSSDQHLSNFHQAYGSDLGHHQQQNYQFVQLPNLESPTLSTSFGTNETKINNNNNN 120
           T+MVNSSDQ L N+H      L   QQQNYQ VQLP+LESPTLST+F TNETK NNNNN+
Sbjct: 206 THMVNSSDQ-LPNYH----LQLLQQQQQNYQLVQLPSLESPTLSTNFETNETKRNNNNNH 252

Query: 121 N 122
           +
Sbjct: 266 D 252

BLAST of MELO3C000247 vs. ExPASy Swiss-Prot
Match: Q9C8W9 (NAC domain-containing protein 30 OS=Arabidopsis thaliana OX=3702 GN=NAC030 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 3.5e-08
Identity = 41/112 (36.61%), Postives = 60/112 (53.57%), Query Frame = 0

Query: 1   EEGWVVCRAFRKPSPNQNQV-IGPWNSYQHQALYYDLKNNNNNNNSQFVRSPSFSDAMTP 60
           EEGWVVCRAFRKP PNQ  +   PW     Q   Y ++++NN ++S  + +     A + 
Sbjct: 147 EEGWVVCRAFRKPIPNQRPLGYEPW-----QNQLYHVESSNNYSSSVTMNTSHHIGASSS 206

Query: 61  HTNMVNSSDQHLSNFHQAYGSDLGHHQQQNYQFVQLPNLESPTLSTSFGTNE 112
             N+   +   +SN H  Y  +        Y  ++LP L+SP+LS S GTN+
Sbjct: 207 SHNL---NQMLMSNNH--YNPNNTSSSMHQYGNIELPQLDSPSLSPSLGTNK 248

BLAST of MELO3C000247 vs. ExPASy TrEMBL
Match: A0A5D3BEI4 (NAC domain-containing protein 30 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold51453G00010 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 8.0e-64
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0

Query: 1   EEGWVVCRAFRKPSPNQNQVIGPWNSYQHQALYYDLKNNNNNNNSQFVRSPSFSDAMTPH 60
           EEGWVVCRAFRKPSPNQNQVIGPWNSYQHQALYYDLKNNNNNNNSQFVRSPSFSDAMTPH
Sbjct: 3   EEGWVVCRAFRKPSPNQNQVIGPWNSYQHQALYYDLKNNNNNNNSQFVRSPSFSDAMTPH 62

Query: 61  TNMVNSSDQHLSNFHQAYGSDLGHHQQQNYQFVQLPNLESPTLSTSFGTNETKINNNNNN 120
           TNMVNSSDQHLSNFHQAYGSDLGHHQQQNYQFVQLPNLESPTLSTSFGTNETKINNNNNN
Sbjct: 63  TNMVNSSDQHLSNFHQAYGSDLGHHQQQNYQFVQLPNLESPTLSTSFGTNETKINNNNNN 122

Query: 121 NHN 124
           NHN
Sbjct: 123 NHN 125

BLAST of MELO3C000247 vs. ExPASy TrEMBL
Match: A0A0A0K4F0 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G273640 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 4.4e-54
Identity = 113/124 (91.13%), Postives = 119/124 (95.97%), Query Frame = 0

Query: 1   EEGWVVCRAFRKPSPNQNQVIGPWNSYQHQALYYDLKNNNNNNNSQFVR-SPSFSDAMTP 60
           EEGWVVCRAF+KPSPNQNQVIGPWNSYQHQALYYDLK NNNNNNSQF R SPSFSDAMTP
Sbjct: 146 EEGWVVCRAFKKPSPNQNQVIGPWNSYQHQALYYDLK-NNNNNNSQFARSSPSFSDAMTP 205

Query: 61  HTNMVNSSDQHLSNFHQAYGSDLGHHQQQNYQFVQLPNLESPTLSTSFGTNETKINNNNN 120
           HT+M+NSSDQHLSNFHQ+YGSDL HH+QQNYQFVQLPNLESPTLSTSFGTNETKINNNN+
Sbjct: 206 HTHMLNSSDQHLSNFHQSYGSDL-HHKQQNYQFVQLPNLESPTLSTSFGTNETKINNNND 265

Query: 121 NNHN 124
           NN N
Sbjct: 266 NNPN 267

BLAST of MELO3C000247 vs. ExPASy TrEMBL
Match: A0A6J1IIC0 (NAC domain-containing protein 30-like OS=Cucurbita maxima OX=3661 GN=LOC111477167 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 1.2e-32
Identity = 84/121 (69.42%), Postives = 92/121 (76.03%), Query Frame = 0

Query: 1   EEGWVVCRAFRKPSPNQNQVIGPWNSYQHQALYYDLKNNNNNNNSQFVRSPSFSDAMTPH 60
           EEGWVVCRAF+KPSPNQNQ IG WNSYQH  LYYDLKNNNN+         +FSDAMTP 
Sbjct: 146 EEGWVVCRAFKKPSPNQNQAIGAWNSYQHHGLYYDLKNNNNS---------TFSDAMTP- 205

Query: 61  TNMVNSSDQHLSNFHQAYGSDLGHHQQQNYQFVQLPNLESPTLSTSFGTNETKINNNNNN 120
           T+MVNSSDQ L N+H          QQQNYQ VQLP+LESPTLST+F TNETK NNNNN+
Sbjct: 206 THMVNSSDQ-LQNYHLQL-----QQQQQNYQLVQLPSLESPTLSTNFETNETKRNNNNNH 250

Query: 121 N 122
           N
Sbjct: 266 N 250

BLAST of MELO3C000247 vs. ExPASy TrEMBL
Match: A0A6J1FFG1 (NAC domain-containing protein 30-like OS=Cucurbita moschata OX=3662 GN=LOC111443466 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 3.6e-32
Identity = 83/121 (68.60%), Postives = 93/121 (76.86%), Query Frame = 0

Query: 1   EEGWVVCRAFRKPSPNQNQVIGPWNSYQHQALYYDLKNNNNNNNSQFVRSPSFSDAMTPH 60
           EEGWVVCRAF+KPSP QNQ IG WNSYQHQ LYYDLKNNNN+         +FSDAMTP 
Sbjct: 146 EEGWVVCRAFKKPSPTQNQAIGAWNSYQHQGLYYDLKNNNNS---------TFSDAMTP- 205

Query: 61  TNMVNSSDQHLSNFHQAYGSDLGHHQQQNYQFVQLPNLESPTLSTSFGTNETKINNNNNN 120
           T+MVNSSDQ L N+H      L   QQQNYQ +QLP+LESPTLST+F TNETK NNNNN+
Sbjct: 206 THMVNSSDQ-LPNYH----LQLLQQQQQNYQLIQLPSLESPTLSTNFETNETKRNNNNNH 251

Query: 121 N 122
           +
Sbjct: 266 D 251

BLAST of MELO3C000247 vs. ExPASy TrEMBL
Match: A0A6J1DTW7 (NAC domain-containing protein 30-like OS=Momordica charantia OX=3673 GN=LOC111023457 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 4.7e-24
Identity = 75/125 (60.00%), Postives = 88/125 (70.40%), Query Frame = 0

Query: 1   EEGWVVCRAFRKPSPNQNQVIGPWNS-YQH-QALYYDLKNNNNNNNSQFVRSPSFSDAMT 60
           EEGWVVCRAF+KPSPNQNQ IG WN  Y H Q  +YDLK    NN ++FVRSPSFS AMT
Sbjct: 151 EEGWVVCRAFKKPSPNQNQSIGAWNGPYHHQQQAFYDLK----NNTTEFVRSPSFSGAMT 210

Query: 61  PHTNMVNSSDQHLSNFHQAYGSDLGHHQQQNY---QFVQLPNLESPTLSTSFGTNETKIN 120
             ++++N+SDQ        Y SD   H    Y   Q VQLP+LESPTLS SFGTNETKIN
Sbjct: 211 -SSHLLNNSDQ------LPYASDQQQHFLPAYDVNQLVQLPSLESPTLSPSFGTNETKIN 264

BLAST of MELO3C000247 vs. TAIR 10
Match: AT1G71930.1 (vascular related NAC-domain protein 7 )

HSP 1 Score: 59.3 bits (142), Expect = 2.5e-09
Identity = 41/112 (36.61%), Postives = 60/112 (53.57%), Query Frame = 0

Query: 1   EEGWVVCRAFRKPSPNQNQV-IGPWNSYQHQALYYDLKNNNNNNNSQFVRSPSFSDAMTP 60
           EEGWVVCRAFRKP PNQ  +   PW     Q   Y ++++NN ++S  + +     A + 
Sbjct: 147 EEGWVVCRAFRKPIPNQRPLGYEPW-----QNQLYHVESSNNYSSSVTMNTSHHIGASSS 206

Query: 61  HTNMVNSSDQHLSNFHQAYGSDLGHHQQQNYQFVQLPNLESPTLSTSFGTNE 112
             N+   +   +SN H  Y  +        Y  ++LP L+SP+LS S GTN+
Sbjct: 207 SHNL---NQMLMSNNH--YNPNNTSSSMHQYGNIELPQLDSPSLSPSLGTNK 248

BLAST of MELO3C000247 vs. TAIR 10
Match: AT4G36160.1 (NAC domain containing protein 76 )

HSP 1 Score: 40.8 bits (94), Expect = 9.2e-04
Identity = 42/129 (32.56%), Postives = 59/129 (45.74%), Query Frame = 0

Query: 1   EEGWVVCRAF-RKPSPNQNQVIGPWNSYQHQALYYDLKNNNNNNNSQFVRSPSFSDAMTP 60
           EEGWVVCRAF +KP   Q +    W+S    + +YD               PS   ++T 
Sbjct: 148 EEGWVVCRAFKKKPMTGQAKNTETWSS----SYFYD-------------ELPSGVRSVTE 207

Query: 61  HTNMVNSSDQH-----LSNFHQAYGSDLGHHQQQNYQFVQLPNLESPTLSTSFG----TN 120
             N V+   Q+     L    +  GSD+G +     QF+QLP LESP+L  +      T+
Sbjct: 208 PLNYVSKQKQNVFAQDLMFKQELEGSDIGLNFIHCDQFIQLPQLESPSLPLTKRPVSLTS 259

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0032930.11.7e-63100.00NAC domain-containing protein 30 [Cucumis melo var. makuwa] >TYJ97449.1 NAC doma... [more]
XP_004149423.19.1e-5491.13NAC domain-containing protein 30 [Cucumis sativus][more]
KAE8646149.11.0e-5290.24hypothetical protein Csa_015564 [Cucumis sativus][more]
XP_038899845.12.4e-4680.33NAC domain-containing protein 30-like [Benincasa hispida][more]
XP_023554182.12.6e-3270.25NAC domain-containing protein 30-like [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Q9C8W93.5e-0836.61NAC domain-containing protein 30 OS=Arabidopsis thaliana OX=3702 GN=NAC030 PE=1 ... [more]
Match NameE-valueIdentityDescription
A0A5D3BEI48.0e-64100.00NAC domain-containing protein 30 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A0A0K4F04.4e-5491.13NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G273640 PE=4 SV... [more]
A0A6J1IIC01.2e-3269.42NAC domain-containing protein 30-like OS=Cucurbita maxima OX=3661 GN=LOC11147716... [more]
A0A6J1FFG13.6e-3268.60NAC domain-containing protein 30-like OS=Cucurbita moschata OX=3662 GN=LOC111443... [more]
A0A6J1DTW74.7e-2460.00NAC domain-containing protein 30-like OS=Momordica charantia OX=3673 GN=LOC11102... [more]
Match NameE-valueIdentityDescription
AT1G71930.12.5e-0936.61vascular related NAC-domain protein 7 [more]
AT4G36160.19.2e-0432.56NAC domain containing protein 76 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 42..67
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 101..123
NoneNo IPR availablePANTHERPTHR31989:SF363NAC DOMAIN-CONTAINING PROTEIN 30coord: 1..121
NoneNo IPR availablePANTHERPTHR31989NAC DOMAIN-CONTAINING PROTEIN 82-RELATEDcoord: 1..121

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C000247.1MELO3C000247.1mRNA