MELO3C000189 (gene) Melon (DHL92) v4

Overview


Name	MELO3C000189
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Cadmium/zinc-transporting ATPase HMA3-like
Location	chr02: 23199905 .. 23200133 (+)
RNA-Seq Expression	MELO3C000189
Synteny	MELO3C000189

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCCACGGCGGCCTCAACGGCGGCGACAGAGGCAGGGGGAAAGAAGGGTGGTGGGTTGAAGAAAAGTTACTTCGATGTGTTGGGGATTTGTTGTTCTTCAGAAATTCCGGTGATTGAGAATATATTGAAGGAAATCGAAGGGATTAAAGAGATTAGAGTGATTGTTGCAACAAGAACTGTCATTGTTCTTCATGATGATCTTCTCGTTTCCCAAGCACAAATTG

mRNA sequence

ATGGCGGCCACGGCGGCCTCAACGGCGGCGACAGAGGCAGGGGGAAAGAAGGGTGGTGGGTTGAAGAAAAGTTACTTCGATGTGTTGGGGATTTGTTGTTCTTCAGAAATTCCGGTGATTGAGAATATATTGAAGGAAATCGAAGGGATTAAAGAGATTAGAGTGATTGTTGCAACAAGAACTGTCATTGTTCTTCATGATGATCTTCTCGTTTCCCAAGCACAAATTG

Coding sequence (CDS)

ATGGCGGCCACGGCGGCCTCAACGGCGGCGACAGAGGCAGGGGGAAAGAAGGGTGGTGGGTTGAAGAAAAGTTACTTCGATGTGTTGGGGATTTGTTGTTCTTCAGAAATTCCGGTGATTGAGAATATATTGAAGGAAATCGAAGGGATTAAAGAGATTAGAGTGATTGTTGCAACAAGAACTGTCATTGTTCTTCATGATGATCTTCTCGTTTCCCAAGCACAAATT

Protein sequence

MAATAASTAATEAGGKKGGGLKKSYFDVLGICCSSEIPVIENILKEIEGIKEIRVIVATRTVIVLHDDLLVSQAQI

Homology

[Close]

BLAST of MELO3C000189 vs. NCBI nr
Match: KAA0058228.1 (cadmium/zinc-transporting ATPase HMA3-like [Cucumis melo var. makuwa])

HSP 1 Score: 141.0 bits (354), Expect = 4.3e-30
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0


Query: 1  MAATAASTAATEAGGKKGGGLKKSYFDVLGICCSSEIPVIENILKEIEGIKEIRVIVATR 60
          MAATAASTAATEAGGKKGGGLKKSYFDVLGICCSSEIPVIENILKEIEGIKEIRVIVATR
Sbjct: 1  MAATAASTAATEAGGKKGGGLKKSYFDVLGICCSSEIPVIENILKEIEGIKEIRVIVATR 60

Query: 61 TVIVLHDDLLVSQAQI 77
          TVIVLHDDLLVSQAQI
Sbjct: 61 TVIVLHDDLLVSQAQI 76

[Close]

BLAST of MELO3C000189 vs. NCBI nr
Match: TYK28586.1 (cadmium/zinc-transporting ATPase HMA3-like [Cucumis melo var. makuwa])

HSP 1 Score: 137.9 bits (346), Expect = 3.7e-29
Identity = 75/76 (98.68%), Postives = 75/76 (98.68%), Query Frame = 0


Query: 1  MAATAASTAATEAGGKKGGGLKKSYFDVLGICCSSEIPVIENILKEIEGIKEIRVIVATR 60
          MAATAASTAATEAG KKGGGLKKSYFDVLGICCSSEIPVIENILKEIEGIKEIRVIVATR
Sbjct: 1  MAATAASTAATEAGEKKGGGLKKSYFDVLGICCSSEIPVIENILKEIEGIKEIRVIVATR 60

Query: 61 TVIVLHDDLLVSQAQI 77
          TVIVLHDDLLVSQAQI
Sbjct: 61 TVIVLHDDLLVSQAQI 76

[Close]

BLAST of MELO3C000189 vs. NCBI nr
Match: NP_001288715.1 (cadmium/zinc-transporting ATPase HMA2-like [Cucumis sativus] >AIJ19561.1 heavy metal ATPase 4 [Cucumis sativus] >KGN65476.1 hypothetical protein Csa_019616 [Cucumis sativus])

HSP 1 Score: 123.2 bits (308), Expect = 9.3e-25
Identity = 65/68 (95.59%), Postives = 66/68 (97.06%), Query Frame = 0


Query: 9  AATEAGGKKGGGLKKSYFDVLGICCSSEIPVIENILKEIEGIKEIRVIVATRTVIVLHDD 68
          AATEA G KGGGLKKSYFDVLGICCSSEIPVIENILK+IEGIKEIRVIVATRTVIVLHDD
Sbjct: 2  AATEAEGNKGGGLKKSYFDVLGICCSSEIPVIENILKDIEGIKEIRVIVATRTVIVLHDD 61

Query: 69 LLVSQAQI 77
          LLVSQAQI
Sbjct: 62 LLVSQAQI 69

[Close]

BLAST of MELO3C000189 vs. NCBI nr
Match: XP_031744854.1 (cadmium/zinc-transporting ATPase HMA2-like isoform X1 [Cucumis sativus])

HSP 1 Score: 123.2 bits (308), Expect = 9.3e-25
Identity = 65/68 (95.59%), Postives = 66/68 (97.06%), Query Frame = 0


Query: 9  AATEAGGKKGGGLKKSYFDVLGICCSSEIPVIENILKEIEGIKEIRVIVATRTVIVLHDD 68
          AATEA G KGGGLKKSYFDVLGICCSSEIPVIENILK+IEGIKEIRVIVATRTVIVLHDD
Sbjct: 2  AATEAEGNKGGGLKKSYFDVLGICCSSEIPVIENILKDIEGIKEIRVIVATRTVIVLHDD 61

Query: 69 LLVSQAQI 77
          LLVSQAQI
Sbjct: 62 LLVSQAQI 69

[Close]

BLAST of MELO3C000189 vs. NCBI nr
Match: XP_038878979.1 (cadmium/zinc-transporting ATPase HMA3-like isoform X1 [Benincasa hispida])

HSP 1 Score: 117.1 bits (292), Expect = 6.7e-23
Identity = 63/72 (87.50%), Postives = 65/72 (90.28%), Query Frame = 0


Query: 5  AASTAATEAGGKKGGGLKKSYFDVLGICCSSEIPVIENILKEIEGIKEIRVIVATRTVIV 64
          A   AA    GKKGGGL+KSYFDVLGICCSSEIPVIENILKEIEGIKEIRVIVATRTVIV
Sbjct: 3  AGEEAAAGMAGKKGGGLQKSYFDVLGICCSSEIPVIENILKEIEGIKEIRVIVATRTVIV 62

Query: 65 LHDDLLVSQAQI 77
          LHD+LLVSQAQI
Sbjct: 63 LHDNLLVSQAQI 74

[Close]

BLAST of MELO3C000189 vs. ExPASy Swiss-Prot
Match: O64474 (Putative cadmium/zinc-transporting ATPase HMA4 OS=Arabidopsis thaliana OX=3702 GN=HMA4 PE=1 SV=2)

HSP 1 Score: 84.3 bits (207), Expect = 6.3e-16
Identity = 41/61 (67.21%), Postives = 51/61 (83.61%), Query Frame = 0


Query: 16 KKGGGLKKSYFDVLGICCSSEIPVIENILKEIEGIKEIRVIVATRTVIVLHDDLLVSQAQ 75
          KK   L+KSYFDVLGICC+SE+P+IENILK ++G+KE  VIV +RTVIV+HD LL+S  Q
Sbjct: 11 KKVKKLQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQ 70

Query: 76 I 77
          I
Sbjct: 71 I 71

[Close]

BLAST of MELO3C000189 vs. ExPASy Swiss-Prot
Match: Q9SZW4 (Cadmium/zinc-transporting ATPase HMA2 OS=Arabidopsis thaliana OX=3702 GN=HMA2 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.2e-14
Identity = 37/56 (66.07%), Postives = 48/56 (85.71%), Query Frame = 0


Query: 21 LKKSYFDVLGICCSSEIPVIENILKEIEGIKEIRVIVATRTVIVLHDDLLVSQAQI 77
          + KSYFDVLGICC+SE+P+IENIL  ++G+KE  VIV +RTVIV+HD L++SQ QI
Sbjct: 6  MTKSYFDVLGICCTSEVPLIENILNSMDGVKEFSVIVPSRTVIVVHDTLILSQFQI 61

[Close]

BLAST of MELO3C000189 vs. ExPASy Swiss-Prot
Match: A3BF39 (Cadmium/zinc-transporting ATPase HMA2 OS=Oryza sativa subsp. japonica OX=39947 GN=HMA2 PE=1 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 2.9e-13
Identity = 34/60 (56.67%), Postives = 50/60 (83.33%), Query Frame = 0


Query: 17 KGGGLKKSYFDVLGICCSSEIPVIENILKEIEGIKEIRVIVATRTVIVLHDDLLVSQAQI 76
          +GG  +KSYFDVLGICC SE+P++E +L+ +EG++++ VIV +RTVIV+HD   +SQ+QI
Sbjct: 4  EGGRCQKSYFDVLGICCPSEVPLVEKLLQPLEGVQKVTVIVPSRTVIVVHDVDAISQSQI 63

[Close]

BLAST of MELO3C000189 vs. ExPASy Swiss-Prot
Match: P0CW77 (Putative inactive cadmium/zinc-transporting ATPase HMA3 OS=Arabidopsis thaliana OX=3702 GN=HMA3 PE=5 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 1.9e-12
Identity = 34/65 (52.31%), Postives = 48/65 (73.85%), Query Frame = 0


Query: 12 EAGGKKGGGLKKSYFDVLGICCSSEIPVIENILKEIEGIKEIRVIVATRTVIVLHDDLLV 71
          E    K   L+ SYFDV+GICCSSE+ ++ N+L++++G+KE  VIV +RTVIV+HD  L+
Sbjct: 3  EGEESKKMNLQTSYFDVVGICCSSEVSIVGNVLRQVDGVKEFSVIVPSRTVIVVHDTFLI 62

Query: 72 SQAQI 77
          S  QI
Sbjct: 63 SPLQI 67

[Close]

BLAST of MELO3C000189 vs. ExPASy Swiss-Prot
Match: P0CW78 (Cadmium/zinc-transporting ATPase HMA3 OS=Arabidopsis thaliana OX=3702 GN=HMA3 PE=1 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 1.9e-12
Identity = 34/65 (52.31%), Postives = 48/65 (73.85%), Query Frame = 0


Query: 12 EAGGKKGGGLKKSYFDVLGICCSSEIPVIENILKEIEGIKEIRVIVATRTVIVLHDDLLV 71
          E    K   L+ SYFDV+GICCSSE+ ++ N+L++++G+KE  VIV +RTVIV+HD  L+
Sbjct: 3  EGEESKKMNLQTSYFDVVGICCSSEVSIVGNVLRQVDGVKEFSVIVPSRTVIVVHDTFLI 62

Query: 72 SQAQI 77
          S  QI
Sbjct: 63 SPLQI 67

[Close]

BLAST of MELO3C000189 vs. ExPASy TrEMBL
Match: A0A5A7USU1 (Cadmium/zinc-transporting ATPase HMA3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G005520 PE=3 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 2.1e-30
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0


Query: 1  MAATAASTAATEAGGKKGGGLKKSYFDVLGICCSSEIPVIENILKEIEGIKEIRVIVATR 60
          MAATAASTAATEAGGKKGGGLKKSYFDVLGICCSSEIPVIENILKEIEGIKEIRVIVATR
Sbjct: 1  MAATAASTAATEAGGKKGGGLKKSYFDVLGICCSSEIPVIENILKEIEGIKEIRVIVATR 60

Query: 61 TVIVLHDDLLVSQAQI 77
          TVIVLHDDLLVSQAQI
Sbjct: 61 TVIVLHDDLLVSQAQI 76

[Close]

BLAST of MELO3C000189 vs. ExPASy TrEMBL
Match: A0A5D3DXU0 (Cadmium/zinc-transporting ATPase HMA3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G002360 PE=3 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.8e-29
Identity = 75/76 (98.68%), Postives = 75/76 (98.68%), Query Frame = 0


Query: 1  MAATAASTAATEAGGKKGGGLKKSYFDVLGICCSSEIPVIENILKEIEGIKEIRVIVATR 60
          MAATAASTAATEAG KKGGGLKKSYFDVLGICCSSEIPVIENILKEIEGIKEIRVIVATR
Sbjct: 1  MAATAASTAATEAGEKKGGGLKKSYFDVLGICCSSEIPVIENILKEIEGIKEIRVIVATR 60

Query: 61 TVIVLHDDLLVSQAQI 77
          TVIVLHDDLLVSQAQI
Sbjct: 61 TVIVLHDDLLVSQAQI 76

[Close]

BLAST of MELO3C000189 vs. ExPASy TrEMBL
Match: A0A076MFR3 (Heavy metal ATPase 4 OS=Cucumis sativus OX=3659 GN=HMA4 PE=2 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 4.5e-25
Identity = 65/68 (95.59%), Postives = 66/68 (97.06%), Query Frame = 0


Query: 9  AATEAGGKKGGGLKKSYFDVLGICCSSEIPVIENILKEIEGIKEIRVIVATRTVIVLHDD 68
          AATEA G KGGGLKKSYFDVLGICCSSEIPVIENILK+IEGIKEIRVIVATRTVIVLHDD
Sbjct: 2  AATEAEGNKGGGLKKSYFDVLGICCSSEIPVIENILKDIEGIKEIRVIVATRTVIVLHDD 61

Query: 69 LLVSQAQI 77
          LLVSQAQI
Sbjct: 62 LLVSQAQI 69

[Close]

BLAST of MELO3C000189 vs. ExPASy TrEMBL
Match: A0A6J1JIQ2 (cadmium/zinc-transporting ATPase HMA3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484805 PE=3 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 5.2e-21
Identity = 58/71 (81.69%), Postives = 64/71 (90.14%), Query Frame = 0


Query: 6  ASTAATEAGGKKGGGLKKSYFDVLGICCSSEIPVIENILKEIEGIKEIRVIVATRTVIVL 65
          A+ AA EA G  GG L+KSYFDVLGICCSSEIP+IENILKEIEGIKEI+VIVATRT+IVL
Sbjct: 2  AAAAAAEAPGNNGGALQKSYFDVLGICCSSEIPLIENILKEIEGIKEIKVIVATRTLIVL 61

Query: 66 HDDLLVSQAQI 77
          H +LLVSQAQI
Sbjct: 62 HHNLLVSQAQI 72

[Close]

BLAST of MELO3C000189 vs. ExPASy TrEMBL
Match: A0A6J1JG42 (cadmium/zinc-transporting ATPase HMA3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484805 PE=3 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 5.2e-21
Identity = 58/71 (81.69%), Postives = 64/71 (90.14%), Query Frame = 0


Query: 6  ASTAATEAGGKKGGGLKKSYFDVLGICCSSEIPVIENILKEIEGIKEIRVIVATRTVIVL 65
          A+ AA EA G  GG L+KSYFDVLGICCSSEIP+IENILKEIEGIKEI+VIVATRT+IVL
Sbjct: 2  AAAAAAEAPGNNGGALQKSYFDVLGICCSSEIPLIENILKEIEGIKEIKVIVATRTLIVL 61

Query: 66 HDDLLVSQAQI 77
          H +LLVSQAQI
Sbjct: 62 HHNLLVSQAQI 72

[Close]

BLAST of MELO3C000189 vs. TAIR 10
Match: AT2G19110.1 (heavy metal atpase 4 )

HSP 1 Score: 84.3 bits (207), Expect = 4.5e-17
Identity = 41/61 (67.21%), Postives = 51/61 (83.61%), Query Frame = 0


Query: 16 KKGGGLKKSYFDVLGICCSSEIPVIENILKEIEGIKEIRVIVATRTVIVLHDDLLVSQAQ 75
          KK   L+KSYFDVLGICC+SE+P+IENILK ++G+KE  VIV +RTVIV+HD LL+S  Q
Sbjct: 11 KKVKKLQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQ 70

Query: 76 I 77
          I
Sbjct: 71 I 71

[Close]

BLAST of MELO3C000189 vs. TAIR 10
Match: AT4G30110.1 (heavy metal atpase 2 )

HSP 1 Score: 80.1 bits (196), Expect = 8.5e-16
Identity = 37/56 (66.07%), Postives = 48/56 (85.71%), Query Frame = 0


Query: 21 LKKSYFDVLGICCSSEIPVIENILKEIEGIKEIRVIVATRTVIVLHDDLLVSQAQI 77
          + KSYFDVLGICC+SE+P+IENIL  ++G+KE  VIV +RTVIV+HD L++SQ QI
Sbjct: 6  MTKSYFDVLGICCTSEVPLIENILNSMDGVKEFSVIVPSRTVIVVHDTLILSQFQI 61

[Close]

BLAST of MELO3C000189 vs. TAIR 10
Match: AT4G30120.1 (heavy metal atpase 3 )

HSP 1 Score: 72.8 bits (177), Expect = 1.3e-13
Identity = 34/65 (52.31%), Postives = 48/65 (73.85%), Query Frame = 0


Query: 12 EAGGKKGGGLKKSYFDVLGICCSSEIPVIENILKEIEGIKEIRVIVATRTVIVLHDDLLV 71
          E    K   L+ SYFDV+GICCSSE+ ++ N+L++++G+KE  VIV +RTVIV+HD  L+
Sbjct: 3  EGEESKKMNLQTSYFDVVGICCSSEVSIVGNVLRQVDGVKEFSVIVPSRTVIVVHDTFLI 62

Query: 72 SQAQI 77
          S  QI
Sbjct: 63 SPLQI 67

The following BLAST results are available for this feature:

BLAST of MELO3C000189 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0058228.1	4.3e-30	100.00	cadmium/zinc-transporting ATPase HMA3-like [Cucumis melo var. makuwa]	[more]
TYK28586.1	3.7e-29	98.68	cadmium/zinc-transporting ATPase HMA3-like [Cucumis melo var. makuwa]	[more]
NP_001288715.1	9.3e-25	95.59	cadmium/zinc-transporting ATPase HMA2-like [Cucumis sativus] >AIJ19561.1 heavy m...	[more]
XP_031744854.1	9.3e-25	95.59	cadmium/zinc-transporting ATPase HMA2-like isoform X1 [Cucumis sativus]	[more]
XP_038878979.1	6.7e-23	87.50	cadmium/zinc-transporting ATPase HMA3-like isoform X1 [Benincasa hispida]	[more]

BLAST of MELO3C000189 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O64474	6.3e-16	67.21	Putative cadmium/zinc-transporting ATPase HMA4 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9SZW4	1.2e-14	66.07	Cadmium/zinc-transporting ATPase HMA2 OS=Arabidopsis thaliana OX=3702 GN=HMA2 PE...	[more]
A3BF39	2.9e-13	56.67	Cadmium/zinc-transporting ATPase HMA2 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
P0CW77	1.9e-12	52.31	Putative inactive cadmium/zinc-transporting ATPase HMA3 OS=Arabidopsis thaliana ...	[more]
P0CW78	1.9e-12	52.31	Cadmium/zinc-transporting ATPase HMA3 OS=Arabidopsis thaliana OX=3702 GN=HMA3 PE...	[more]

BLAST of MELO3C000189 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7USU1	2.1e-30	100.00	Cadmium/zinc-transporting ATPase HMA3-like OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A5D3DXU0	1.8e-29	98.68	Cadmium/zinc-transporting ATPase HMA3-like OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A076MFR3	4.5e-25	95.59	Heavy metal ATPase 4 OS=Cucumis sativus OX=3659 GN=HMA4 PE=2 SV=1	[more]
A0A6J1JIQ2	5.2e-21	81.69	cadmium/zinc-transporting ATPase HMA3-like isoform X1 OS=Cucurbita maxima OX=366...	[more]
A0A6J1JG42	5.2e-21	81.69	cadmium/zinc-transporting ATPase HMA3-like isoform X2 OS=Cucurbita maxima OX=366...	[more]

BLAST of MELO3C000189 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G19110.1	4.5e-17	67.21	heavy metal atpase 4	[more]
AT4G30110.1	8.5e-16	66.07	heavy metal atpase 2	[more]
AT4G30120.1	1.3e-13	52.31	heavy metal atpase 3	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.70.100		coord: 20..76 e-value: 5.1E-10 score: 41.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR48085:SF4	CADMIUM/ZINC-TRANSPORTING ATPASE HMA4-RELATED	coord: 16..76
None	No IPR available	PANTHER	PTHR48085	CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED	coord: 16..76
IPR006121	Heavy metal-associated domain, HMA	PROSITE	PS50846	HMA_2	coord: 23..76 score: 12.973839
IPR036163	Heavy metal-associated domain superfamily	SUPERFAMILY	55008	HMA, heavy metal-associated domain	coord: 19..76

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C000189.1	MELO3C000189.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding