MELO3C000137.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C000137.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Non-specific serine/threonine protein kinase
Location	chr08: 17065853 .. 17066765 (+)
RNA-Seq Expression	MELO3C000137.jh1
Synteny	MELO3C000137.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCCTCTTTCTCGACGACCACCCACCGCAGCCAACCGTGCGTTCTAGTCGTTCACCACGTTTGAAGCTGTTGCATTCCTTTCGTAAACCTCAGTCCCGTTTGCCTAAGCCGAGCGTCGAGCATCGCGTCATTCTTCTCCCCGTGTGTCGTCTGACGAAGCAAGTGCTTACCACAGATAACGAGGAGAATGGCTTAATTTGTATTCGCATAATCTTTGATCTTCTTAGAAATTTTAGTCCGACTCTAGAAAATGAAGTGCAACCATTGCTAGACTTCGTGTGGAAAATTTACCAGAACTTTAAGCTGACTGTAAGCCATGTTTTTGAAAATCCAGCTGCTAGTGTCGAAGATGTAAAGCCCATGGAAGTATCCACTTCATCGGACCAGTCAATGAATTCTGGATGCACGGGGACTGTGCAACTCAATCCCAGTACCCGTTCATTTAAGATAGAAACGGAGAGTCCACTGGTCGTCATGTTTCTTTTCCAGCTATATAGTCGGCTTGTTCAAACAAATATCCCTCTCTTGTTGCCTCTGATGGTTTCTGCTATTTCTGTTTCGAGACCTGAAAAGGTTCCTCCCTCTTTGAAGACTCATTTCATTGAACTGAAGGGTGCGCAGGTTAAGGTATGTTGTATGCGACTCGTTTTGTATATATATATGTTTAAATTTTGGCAAGGGAGGGTGAAACATGATTCCTTGAATGTCTGTAACAATGTAGCTATTTATTCTCGTAGGCTTTACACCCAAATGTCCTATAGAAAAAGAATGCTGAGAAAAGTGTTATGATTTTGTTGTTGTCTTGACTTTGATGTAGTAACCATAGAGTGATTGTTTTCTGTTGGCTTTGCTTGTTGTTGGGATTGATTATTATGCATCTATATATTTGTTGTAGGACAAGGAAGATCAATGA

mRNA sequence

CCCCTCTTTCTCGACGACCACCCACCGCAGCCAACCGTGCGTTCTAGTCGTTCACCACGTTTGAAGCTGTTGCATTCCTTTCGTAAACCTCAGTCCCGTTTGCCTAAGCCGAGCGTCGAGCATCGCGTCATTCTTCTCCCCGTGTGTCGTCTGACGAAGCAAGTGCTTACCACAGATAACGAGGAGAATGGCTTAATTTGTATTCGCATAATCTTTGATCTTCTTAGAAATTTTAGTCCGACTCTAGAAAATGAAGTGCAACCATTGCTAGACTTCGTGTGGAAAATTTACCAGAACTTTAAGCTGACTGTAAGCCATGTTTTTGAAAATCCAGCTGCTAGTGTCGAAGATGTAAAGCCCATGGAAGTATCCACTTCATCGGACCAGTCAATGAATTCTGGATGCACGGGGACTGTGCAACTCAATCCCAGTACCCGTTCATTTAAGATAGAAACGGAGAGTCCACTGGTCGTCATGTTTCTTTTCCAGCTATATAGTCGGCTTGTTCAAACAAATATCCCTCTCTTGTTGCCTCTGATGGTTTCTGCTATTTCTGTTTCGAGACCTGAAAAGGTTCCTCCCTCTTTGAAGACTCATTTCATTGAACTGAAGGGTGCGCAGGTTAAGGACAAGGAAGATCAATGA

Coding sequence (CDS)

ATGGAAGTATCCACTTCATCGGACCAGTCAATGAATTCTGGATGCACGGGGACTGTGCAACTCAATCCCAGTACCCGTTCATTTAAGATAGAAACGGAGAGTCCACTGGTCGTCATGTTTCTTTTCCAGCTATATAGTCGGCTTGTTCAAACAAATATCCCTCTCTTGTTGCCTCTGATGGTTTCTGCTATTTCTGTTTCGAGACCTGAAAAGGTTCCTCCCTCTTTGAAGACTCATTTCATTGAACTGAAGGGTGCGCAGGTTAAGGACAAGGAAGATCAATGA

Protein sequence

MEVSTSSDQSMNSGCTGTVQLNPSTRSFKIETESPLVVMFLFQLYSRLVQTNIPLLLPLMVSAISVSRPEKVPPSLKTHFIELKGAQVKDKEDQ

Homology

[Close]

BLAST of MELO3C000137.jh1 vs. NCBI nr
Match: KAA0067246.1 (transformation/transcription domain-associated protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 161 bits (408), Expect = 6.22e-49
Identity = 89/94 (94.68%), Postives = 89/94 (94.68%), Query Frame = 0


Query: 1   MEVSTSSDQSMNSGCTGTVQLNPSTRSFKIETESPLVVMFLFQLYSRLVQTNIPLLLPLM 60
           MEVSTSSDQSMNSGCTGTVQLNPSTRSFKI TES LVVMFLFQLYSRLVQTNIPLLLPLM
Sbjct: 43  MEVSTSSDQSMNSGCTGTVQLNPSTRSFKIVTESLLVVMFLFQLYSRLVQTNIPLLLPLM 102

Query: 61  VSAISVSRPEKVPPSLKTHFIELKGAQVKDKEDQ 94
           VSAISV  PEKVPPSLKTHFIELKGAQVK KEDQ
Sbjct: 103 VSAISVPGPEKVPPSLKTHFIELKGAQVKGKEDQ 136

[Close]

BLAST of MELO3C000137.jh1 vs. NCBI nr
Match: KAA0067827.1 (transformation/transcription domain-associated protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 165 bits (418), Expect = 1.06e-48
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0


Query: 1   MEVSTSSDQSMNSGCTGTVQLNPSTRSFKIETESPLVVMFLFQLYSRLVQTNIPLLLPLM 60
           MEVSTSSDQSMNSGCTGTVQLNPSTRSFKIETESPLVVMFLFQLYSRLVQTNIPLLLPLM
Sbjct: 26  MEVSTSSDQSMNSGCTGTVQLNPSTRSFKIETESPLVVMFLFQLYSRLVQTNIPLLLPLM 85

Query: 61  VSAISVSRPEKVPPSLKTHFIELKGAQVK 89
           VSAISVSRPEKVPPSLKTHFIELKGAQVK
Sbjct: 86  VSAISVSRPEKVPPSLKTHFIELKGAQVK 114

[Close]

BLAST of MELO3C000137.jh1 vs. NCBI nr
Match: KAA0039047.1 (transformation/transcription domain-associated protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 149 bits (377), Expect = 5.36e-44
Identity = 80/84 (95.24%), Postives = 82/84 (97.62%), Query Frame = 0


Query: 1   MEVSTSSDQSMNSGCTGTVQLNPSTRSFKIETESPLVVMFLFQLYSRLVQTNIPLLLPLM 60
           MEVSTSSDQSMN GCTGT+QLNP+TRSFKIETESPLVVMFLFQLYSRLVQTNIPLLLPLM
Sbjct: 26  MEVSTSSDQSMNFGCTGTLQLNPNTRSFKIETESPLVVMFLFQLYSRLVQTNIPLLLPLM 85

Query: 61  VSAISVSRPEKVPPSLKTHFIELK 84
           VSAISV RPEKVPPSLKTHFIELK
Sbjct: 86  VSAISVPRPEKVPPSLKTHFIELK 109

[Close]

BLAST of MELO3C000137.jh1 vs. NCBI nr
Match: TYK12551.1 (transformation/transcription domain-associated protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 158 bits (399), Expect = 5.16e-43
Identity = 86/89 (96.63%), Postives = 86/89 (96.63%), Query Frame = 0


Query: 1   MEVSTSSDQSMNSGCTGTVQLNPSTRSFKIETESPLVVMFLFQLYSRLVQTNIPLLLPLM 60
           MEVSTSSDQSMNSGCTGTVQLNPSTRSFKI TESPLVVMFLFQLYSRLVQTNIPLLLPLM
Sbjct: 197 MEVSTSSDQSMNSGCTGTVQLNPSTRSFKIVTESPLVVMFLFQLYSRLVQTNIPLLLPLM 256

Query: 61  VSAISVSRPEKVPPSLKTHFIELKGAQVK 89
           VSAISV  PEKVPPSLKTHFIELKGAQVK
Sbjct: 257 VSAISVPGPEKVPPSLKTHFIELKGAQVK 285

[Close]

BLAST of MELO3C000137.jh1 vs. NCBI nr
Match: XP_008440816.1 (PREDICTED: transformation/transcription domain-associated protein-like [Cucumis melo])

HSP 1 Score: 158 bits (399), Expect = 2.03e-42
Identity = 86/89 (96.63%), Postives = 86/89 (96.63%), Query Frame = 0


Query: 1   MEVSTSSDQSMNSGCTGTVQLNPSTRSFKIETESPLVVMFLFQLYSRLVQTNIPLLLPLM 60
           MEVSTSSDQSMNSGCTGTVQLNPSTRSFKI TESPLVVMFLFQLYSRLVQTNIPLLLPLM
Sbjct: 171 MEVSTSSDQSMNSGCTGTVQLNPSTRSFKIVTESPLVVMFLFQLYSRLVQTNIPLLLPLM 230

Query: 61  VSAISVSRPEKVPPSLKTHFIELKGAQVK 89
           VSAISV  PEKVPPSLKTHFIELKGAQVK
Sbjct: 231 VSAISVPGPEKVPPSLKTHFIELKGAQVK 259

[Close]

BLAST of MELO3C000137.jh1 vs. ExPASy Swiss-Prot
Match: Q54T85 (Probable transcription-associated protein 1 OS=Dictyostelium discoideum OX=44689 GN=tra1 PE=3 SV=2)

HSP 1 Score: 51.2 bits (121), Expect = 7.3e-06
Identity = 25/66 (37.88%), Postives = 41/66 (62.12%), Query Frame = 0


Query: 24  STRSFKIETESPLVVMFLFQLYSRLVQTNIPLLLPLMVSAISVSRPEKVPPSLKTHFIEL 83
           S  SFKI TE P+VV+ LFQLY+  + +N+P  +PL++  +S+  P     +  + +++ 
Sbjct: 305 SIESFKILTECPIVVILLFQLYNSYMSSNVPKFIPLIIETLSLQAPANSTVTHHSQYVDF 364

Query: 84  KGAQVK 90
             AQVK
Sbjct: 365 IAAQVK 370

[Close]

BLAST of MELO3C000137.jh1 vs. ExPASy TrEMBL
Match: A0A5A7VLB4 (Transformation/transcription domain-associated protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold418G00620 PE=4 SV=1)

HSP 1 Score: 161 bits (408), Expect = 3.01e-49
Identity = 89/94 (94.68%), Postives = 89/94 (94.68%), Query Frame = 0


Query: 1   MEVSTSSDQSMNSGCTGTVQLNPSTRSFKIETESPLVVMFLFQLYSRLVQTNIPLLLPLM 60
           MEVSTSSDQSMNSGCTGTVQLNPSTRSFKI TES LVVMFLFQLYSRLVQTNIPLLLPLM
Sbjct: 43  MEVSTSSDQSMNSGCTGTVQLNPSTRSFKIVTESLLVVMFLFQLYSRLVQTNIPLLLPLM 102

Query: 61  VSAISVSRPEKVPPSLKTHFIELKGAQVKDKEDQ 94
           VSAISV  PEKVPPSLKTHFIELKGAQVK KEDQ
Sbjct: 103 VSAISVPGPEKVPPSLKTHFIELKGAQVKGKEDQ 136

[Close]

BLAST of MELO3C000137.jh1 vs. ExPASy TrEMBL
Match: A0A5A7VKU9 (Transformation/transcription domain-associated protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2484G00340 PE=4 SV=1)

HSP 1 Score: 165 bits (418), Expect = 5.14e-49
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0


Query: 1   MEVSTSSDQSMNSGCTGTVQLNPSTRSFKIETESPLVVMFLFQLYSRLVQTNIPLLLPLM 60
           MEVSTSSDQSMNSGCTGTVQLNPSTRSFKIETESPLVVMFLFQLYSRLVQTNIPLLLPLM
Sbjct: 26  MEVSTSSDQSMNSGCTGTVQLNPSTRSFKIETESPLVVMFLFQLYSRLVQTNIPLLLPLM 85

Query: 61  VSAISVSRPEKVPPSLKTHFIELKGAQVK 89
           VSAISVSRPEKVPPSLKTHFIELKGAQVK
Sbjct: 86  VSAISVSRPEKVPPSLKTHFIELKGAQVK 114

[Close]

BLAST of MELO3C000137.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TBT4 (Transformation/transcription domain-associated protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84G001390 PE=4 SV=1)

HSP 1 Score: 149 bits (377), Expect = 2.59e-44
Identity = 80/84 (95.24%), Postives = 82/84 (97.62%), Query Frame = 0


Query: 1   MEVSTSSDQSMNSGCTGTVQLNPSTRSFKIETESPLVVMFLFQLYSRLVQTNIPLLLPLM 60
           MEVSTSSDQSMN GCTGT+QLNP+TRSFKIETESPLVVMFLFQLYSRLVQTNIPLLLPLM
Sbjct: 26  MEVSTSSDQSMNFGCTGTLQLNPNTRSFKIETESPLVVMFLFQLYSRLVQTNIPLLLPLM 85

Query: 61  VSAISVSRPEKVPPSLKTHFIELK 84
           VSAISV RPEKVPPSLKTHFIELK
Sbjct: 86  VSAISVPRPEKVPPSLKTHFIELK 109

[Close]

BLAST of MELO3C000137.jh1 vs. ExPASy TrEMBL
Match: A0A5D3CL59 (Transformation/transcription domain-associated protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001330 PE=4 SV=1)

HSP 1 Score: 158 bits (399), Expect = 2.50e-43
Identity = 86/89 (96.63%), Postives = 86/89 (96.63%), Query Frame = 0


Query: 1   MEVSTSSDQSMNSGCTGTVQLNPSTRSFKIETESPLVVMFLFQLYSRLVQTNIPLLLPLM 60
           MEVSTSSDQSMNSGCTGTVQLNPSTRSFKI TESPLVVMFLFQLYSRLVQTNIPLLLPLM
Sbjct: 197 MEVSTSSDQSMNSGCTGTVQLNPSTRSFKIVTESPLVVMFLFQLYSRLVQTNIPLLLPLM 256

Query: 61  VSAISVSRPEKVPPSLKTHFIELKGAQVK 89
           VSAISV  PEKVPPSLKTHFIELKGAQVK
Sbjct: 257 VSAISVPGPEKVPPSLKTHFIELKGAQVK 285

[Close]

BLAST of MELO3C000137.jh1 vs. ExPASy TrEMBL
Match: A0A1S3B1J8 (Non-specific serine/threonine protein kinase OS=Cucumis melo OX=3656 GN=LOC103485125 PE=4 SV=1)

HSP 1 Score: 158 bits (399), Expect = 9.83e-43
Identity = 86/89 (96.63%), Postives = 86/89 (96.63%), Query Frame = 0


Query: 1   MEVSTSSDQSMNSGCTGTVQLNPSTRSFKIETESPLVVMFLFQLYSRLVQTNIPLLLPLM 60
           MEVSTSSDQSMNSGCTGTVQLNPSTRSFKI TESPLVVMFLFQLYSRLVQTNIPLLLPLM
Sbjct: 171 MEVSTSSDQSMNSGCTGTVQLNPSTRSFKIVTESPLVVMFLFQLYSRLVQTNIPLLLPLM 230

Query: 61  VSAISVSRPEKVPPSLKTHFIELKGAQVK 89
           VSAISV  PEKVPPSLKTHFIELKGAQVK
Sbjct: 231 VSAISVPGPEKVPPSLKTHFIELKGAQVK 259

[Close]

BLAST of MELO3C000137.jh1 vs. TAIR 10
Match: AT2G17930.1 (Phosphatidylinositol 3- and 4-kinase family protein with FAT domain )

HSP 1 Score: 119.0 bits (297), Expect = 2.0e-27
Identity = 70/90 (77.78%), Postives = 74/90 (82.22%), Query Frame = 0


Query: 1   MEVSTSSDQSMN-SGCTGTVQLNPSTRSFKIETESPLVVMFLFQLYSRLVQTNIPLLLPL 60
           ME+ TSSDQS+  +   G VQLNPSTRSFKI TESPLVVMFLFQLYSRLVQTNIP LLPL
Sbjct: 169 MEMPTSSDQSLTPTPPIGNVQLNPSTRSFKIITESPLVVMFLFQLYSRLVQTNIPHLLPL 228

Query: 61  MVSAISVSRPEKVPPSLKTHFIELKGAQVK 90
           MV+AISV  PE VP  LK  FIELKGAQVK
Sbjct: 229 MVAAISVPGPENVPSHLKPQFIELKGAQVK 258

[Close]

BLAST of MELO3C000137.jh1 vs. TAIR 10
Match: AT4G36080.1 (phosphotransferases, alcohol group as acceptor;binding;inositol or phosphatidylinositol kinases )

HSP 1 Score: 107.5 bits (267), Expect = 6.1e-24
Identity = 62/90 (68.89%), Postives = 72/90 (80.00%), Query Frame = 0


Query: 1   MEVSTSSDQSMN-SGCTGTVQLNPSTRSFKIETESPLVVMFLFQLYSRLVQTNIPLLLPL 60
           +E+ T SDQS++ +  +   Q+NPSTRSFKI TESPLVVMFLFQLYSRLVQ NIP LLPL
Sbjct: 169 VEIPTPSDQSLSITAPSRNGQINPSTRSFKIVTESPLVVMFLFQLYSRLVQINIPNLLPL 228

Query: 61  MVSAISVSRPEKVPPSLKTHFIELKGAQVK 90
           MV+AIS+  PEKV   +K  FIELKGAQVK
Sbjct: 229 MVAAISIPGPEKVSSHMKPQFIELKGAQVK 258

[Close]

BLAST of MELO3C000137.jh1 vs. TAIR 10
Match: AT4G36080.2 (phosphotransferases, alcohol group as acceptor;binding;inositol or phosphatidylinositol kinases )

HSP 1 Score: 107.5 bits (267), Expect = 6.1e-24
Identity = 62/90 (68.89%), Postives = 72/90 (80.00%), Query Frame = 0


Query: 1   MEVSTSSDQSMN-SGCTGTVQLNPSTRSFKIETESPLVVMFLFQLYSRLVQTNIPLLLPL 60
           +E+ T SDQS++ +  +   Q+NPSTRSFKI TESPLVVMFLFQLYSRLVQ NIP LLPL
Sbjct: 169 VEIPTPSDQSLSITAPSRNGQINPSTRSFKIVTESPLVVMFLFQLYSRLVQINIPNLLPL 228

Query: 61  MVSAISVSRPEKVPPSLKTHFIELKGAQVK 90
           MV+AIS+  PEKV   +K  FIELKGAQVK
Sbjct: 229 MVAAISIPGPEKVSSHMKPQFIELKGAQVK 258

[Close]

BLAST of MELO3C000137.jh1 vs. TAIR 10
Match: AT4G36080.3 (phosphotransferases, alcohol group as acceptor;binding;inositol or phosphatidylinositol kinases )

HSP 1 Score: 107.5 bits (267), Expect = 6.1e-24
Identity = 62/90 (68.89%), Postives = 72/90 (80.00%), Query Frame = 0


Query: 1   MEVSTSSDQSMN-SGCTGTVQLNPSTRSFKIETESPLVVMFLFQLYSRLVQTNIPLLLPL 60
           +E+ T SDQS++ +  +   Q+NPSTRSFKI TESPLVVMFLFQLYSRLVQ NIP LLPL
Sbjct: 169 VEIPTPSDQSLSITAPSRNGQINPSTRSFKIVTESPLVVMFLFQLYSRLVQINIPNLLPL 228

Query: 61  MVSAISVSRPEKVPPSLKTHFIELKGAQVK 90
           MV+AIS+  PEKV   +K  FIELKGAQVK
Sbjct: 229 MVAAISIPGPEKVSSHMKPQFIELKGAQVK 258

The following BLAST results are available for this feature:

BLAST of MELO3C000137.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0067246.1	6.22e-49	94.68	transformation/transcription domain-associated protein-like [Cucumis melo var. m...	[more]
KAA0067827.1	1.06e-48	100.00	transformation/transcription domain-associated protein-like [Cucumis melo var. m...	[more]
KAA0039047.1	5.36e-44	95.24	transformation/transcription domain-associated protein-like [Cucumis melo var. m...	[more]
TYK12551.1	5.16e-43	96.63	transformation/transcription domain-associated protein-like [Cucumis melo var. m...	[more]
XP_008440816.1	2.03e-42	96.63	PREDICTED: transformation/transcription domain-associated protein-like [Cucumis ...	[more]

BLAST of MELO3C000137.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54T85	7.3e-06	37.88	Probable transcription-associated protein 1 OS=Dictyostelium discoideum OX=44689...	[more]

BLAST of MELO3C000137.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VLB4	3.01e-49	94.68	Transformation/transcription domain-associated protein-like OS=Cucumis melo var....	[more]
A0A5A7VKU9	5.14e-49	100.00	Transformation/transcription domain-associated protein-like OS=Cucumis melo var....	[more]
A0A5A7TBT4	2.59e-44	95.24	Transformation/transcription domain-associated protein-like OS=Cucumis melo var....	[more]
A0A5D3CL59	2.50e-43	96.63	Transformation/transcription domain-associated protein-like OS=Cucumis melo var....	[more]
A0A1S3B1J8	9.83e-43	96.63	Non-specific serine/threonine protein kinase OS=Cucumis melo OX=3656 GN=LOC10348...	[more]

BLAST of MELO3C000137.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G17930.1	2.0e-27	77.78	Phosphatidylinositol 3- and 4-kinase family protein with FAT domain	[more]
AT4G36080.1	6.1e-24	68.89	phosphotransferases, alcohol group as acceptor;binding;inositol or phosphatidyli...	[more]
AT4G36080.2	6.1e-24	68.89	phosphotransferases, alcohol group as acceptor;binding;inositol or phosphatidyli...	[more]
AT4G36080.3	6.1e-24	68.89	phosphotransferases, alcohol group as acceptor;binding;inositol or phosphatidyli...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11139:SF109	BNAC09G09620D PROTEIN	coord: 2..88
None	No IPR available	PANTHER	PTHR11139	ATAXIA TELANGIECTASIA MUTATED ATM -RELATED	coord: 2..88

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C000137.jh1.t1	MELO3C000137.jh1.t1	mRNA