MELO3C000123 (gene) Melon (DHL92) v4

Overview


Name	MELO3C000123
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Enzymatic polyprotein
Location	chr12: 3429743 .. 3430927 (-)
RNA-Seq Expression	MELO3C000123
Synteny	MELO3C000123

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATAGACAACGGATCCTGACTGCTACGAGAACAGTTGTCAAGACGGAAAATACCTCTACTCCTATCCAAGTTGAAGAACCGGATATGGTAAATCAATTACTCTATACGATGACTAACATTTCATCGGGAGTACTCAAATTCATTTGAATTTAGCAACAGAAGCTCTGCTTGGACTAAAATGTCACAAGATGAGCCGATACAAATGGTATAAAGACACATTCATGGCACGTCTGTATACCCTGACGACATGTGGAGCTGATATCTGGAAACAAAAGTTTGTCGAAGGATTACCACACTACATCTCTCAAAAGTTCTATCAAACCATGACAGCCAATTCCGTCAATCAACAGATAGATTGGGCCAATCTCACCTATGGAGATATTTCGTCTACGGTTCAAATGATATGTGTTAATCTCTGCACAGAGAATAAACACACAACGAAGGTGATCAAAGATTCTGACTATAGGAAAGAACTCGGCACCTTCTGCAAACAATATGGCCTATCTCAAGGACCAAAGGAAGAGAAGAAAAAGAAAAAGAAAAGGTACTCTTCCAAAAAATTCTTTAGAAAAAGCAAGGCTAAAGATCAAGAGTCTCCCCGAAGAAGGAGACGTCATTACAACAAAGGCAAGAGTAAGAAAGGATACTCTTCAAAAACCCATACGATATGCTTCAAGTGCAATCAAAAGGGTCACTATGCAAATCGTTGTCCCCTGAAGGATAAAATCAATGCCATGACAATAGATGAAGAGACAAAGCAATCCCTTCTCTATGCCATAAGATCGGATGATGATACAACTTCTCAAACGGAATCTTCATCAGAAGAAGACTATATCAATATTCTTCAAGAAGAAGGGTCCTCTTCTGAAGAGGAATTCTACTCTCAAAGTGACTCAAGCGATGACGAAGGAGCAATACCCTGCACAGGACGATGTGCTGGTAAGTGTTCTGGCCACATTAATGTCATCACCAAGGATCAGGAAACTCTTTTTGACCTCATCGAGCAGATCCCTGATGAAGAAGCGAAAAGAACCTGCCTCCTCAAATTGAAGCAAAGTTTAGAAGAGCAAGCGCCTCAAAAGGCAATTCAAAATCCGATTATGTATTCATATCAAGACATACTAAATCGAGTCAAGGGCGAAGCAAAAATGCCCATTCAAGTTGAAGATCTTCATCATGAGGTAA

mRNA sequence

GATAGACAACGGATCCTGACTGCTACGAGAACAGTTGTCAAGACGGAAAATACCTCTACTCCTATCCAAGTTGAAGAACCGGATATGGTAAATCAATTACTCTATACGATGACTAACATTTCATCGGGAGTACTCAAATTCATTTGAATTTAGCAACAGAAGCTCTGCTTGGACTAAAATGTCACAAGATGAGCCGATACAAATGGTATAAAGACACATTCATGGCACGTCTGTATACCCTGACGACATGTGGAGCTGATATCTGGAAACAAAAGTTTGTCGAAGGATTACCACACTACATCTCTCAAAAGTTCTATCAAACCATGACAGCCAATTCCGTCAATCAACAGATAGATTGGGCCAATCTCACCTATGGAGATATTTCGTCTACGGTTCAAATGATATGTGTTAATCTCTGCACAGAGAATAAACACACAACGAAGGTGATCAAAGATTCTGACTATAGGAAAGAACTCGGCACCTTCTGCAAACAATATGGCCTATCTCAAGGACCAAAGGAAGAGAAGAAAAAGAAAAAGAAAAGGTACTCTTCCAAAAAATTCTTTAGAAAAAGCAAGGCTAAAGATCAAGAGTCTCCCCGAAGAAGGAGACGTCATTACAACAAAGGCAAGAGTAAGAAAGGATACTCTTCAAAAACCCATACGATATGCTTCAAGTGCAATCAAAAGGGTCACTATGCAAATCGTTGTCCCCTGAAGGATAAAATCAATGCCATGACAATAGATGAAGAGACAAAGCAATCCCTTCTCTATGCCATAAGATCGGATGATGATACAACTTCTCAAACGGAATCTTCATCAGAAGAAGACTATATCAATATTCTTCAAGAAGAAGGGTCCTCTTCTGAAGAGGAATTCTACTCTCAAAGTGACTCAAGCGATGACGAAGGAGCAATACCCTGCACAGGACGATGTGCTGGTAAGTGTTCTGGCCACATTAATGTCATCACCAAGGATCAGGAAACTCTTTTTGACCTCATCGAGCAGATCCCTGATGAAGAAGCGAAAAGAACCTGCCTCCTCAAATTGAAGCAAAGTTTAGAAGAGCAAGCGCCTCAAAAGGCAATTCAAAATCCGATTATGTATTCATATCAAGACATACTAAATCGAGTCAAGGGCGAAGCAAAAATGCCCATTCAAGTTGAAGATCTTCATCATGAGGTAA

Coding sequence (CDS)

ATGAGCCGATACAAATGGTATAAAGACACATTCATGGCACGTCTGTATACCCTGACGACATGTGGAGCTGATATCTGGAAACAAAAGTTTGTCGAAGGATTACCACACTACATCTCTCAAAAGTTCTATCAAACCATGACAGCCAATTCCGTCAATCAACAGATAGATTGGGCCAATCTCACCTATGGAGATATTTCGTCTACGGTTCAAATGATATGTGTTAATCTCTGCACAGAGAATAAACACACAACGAAGGTGATCAAAGATTCTGACTATAGGAAAGAACTCGGCACCTTCTGCAAACAATATGGCCTATCTCAAGGACCAAAGGAAGAGAAGAAAAAGAAAAAGAAAAGGTACTCTTCCAAAAAATTCTTTAGAAAAAGCAAGGCTAAAGATCAAGAGTCTCCCCGAAGAAGGAGACGTCATTACAACAAAGGCAAGAGTAAGAAAGGATACTCTTCAAAAACCCATACGATATGCTTCAAGTGCAATCAAAAGGGTCACTATGCAAATCGTTGTCCCCTGAAGGATAAAATCAATGCCATGACAATAGATGAAGAGACAAAGCAATCCCTTCTCTATGCCATAAGATCGGATGATGATACAACTTCTCAAACGGAATCTTCATCAGAAGAAGACTATATCAATATTCTTCAAGAAGAAGGGTCCTCTTCTGAAGAGGAATTCTACTCTCAAAGTGACTCAAGCGATGACGAAGGAGCAATACCCTGCACAGGACGATGTGCTGGTAAGTGTTCTGGCCACATTAATGTCATCACCAAGGATCAGGAAACTCTTTTTGACCTCATCGAGCAGATCCCTGATGAAGAAGCGAAAAGAACCTGCCTCCTCAAATTGAAGCAAAGTTTAGAAGAGCAAGCGCCTCAAAAGGCAATTCAAAATCCGATTATGTATTCATATCAAGACATACTAAATCGAGTCAAGGGCGAAGCAAAAATGCCCATTCAAGTTGAAGATCTTCATCATGAGGTA

Protein sequence

MSRYKWYKDTFMARLYTLTTCGADIWKQKFVEGLPHYISQKFYQTMTANSVNQQIDWANLTYGDISSTVQMICVNLCTENKHTTKVIKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKRYSSKKFFRKSKAKDQESPRRRRRHYNKGKSKKGYSSKTHTICFKCNQKGHYANRCPLKDKINAMTIDEETKQSLLYAIRSDDDTTSQTESSSEEDYINILQEEGSSSEEEFYSQSDSSDDEGAIPCTGRCAGKCSGHINVITKDQETLFDLIEQIPDEEAKRTCLLKLKQSLEEQAPQKAIQNPIMYSYQDILNRVKGEAKMPIQVEDLHHEV

Homology

[Close]

BLAST of MELO3C000123 vs. NCBI nr
Match: KAA0056776.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 657.1 bits (1694), Expect = 7.9e-185
Identity = 332/332 (100.00%), Postives = 332/332 (100.00%), Query Frame = 0


Query: 1    MSRYKWYKDTFMARLYTLTTCGADIWKQKFVEGLPHYISQKFYQTMTANSVNQQIDWANL 60
            MSRYKWYKDTFMARLYTLTTCGADIWKQKFVEGLPHYISQKFYQTMTANSVNQQIDWANL
Sbjct: 769  MSRYKWYKDTFMARLYTLTTCGADIWKQKFVEGLPHYISQKFYQTMTANSVNQQIDWANL 828

Query: 61   TYGDISSTVQMICVNLCTENKHTTKVIKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKRY 120
            TYGDISSTVQMICVNLCTENKHTTKVIKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKRY
Sbjct: 829  TYGDISSTVQMICVNLCTENKHTTKVIKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKRY 888

Query: 121  SSKKFFRKSKAKDQESPRRRRRHYNKGKSKKGYSSKTHTICFKCNQKGHYANRCPLKDKI 180
            SSKKFFRKSKAKDQESPRRRRRHYNKGKSKKGYSSKTHTICFKCNQKGHYANRCPLKDKI
Sbjct: 889  SSKKFFRKSKAKDQESPRRRRRHYNKGKSKKGYSSKTHTICFKCNQKGHYANRCPLKDKI 948

Query: 181  NAMTIDEETKQSLLYAIRSDDDTTSQTESSSEEDYINILQEEGSSSEEEFYSQSDSSDDE 240
            NAMTIDEETKQSLLYAIRSDDDTTSQTESSSEEDYINILQEEGSSSEEEFYSQSDSSDDE
Sbjct: 949  NAMTIDEETKQSLLYAIRSDDDTTSQTESSSEEDYINILQEEGSSSEEEFYSQSDSSDDE 1008

Query: 241  GAIPCTGRCAGKCSGHINVITKDQETLFDLIEQIPDEEAKRTCLLKLKQSLEEQAPQKAI 300
            GAIPCTGRCAGKCSGHINVITKDQETLFDLIEQIPDEEAKRTCLLKLKQSLEEQAPQKAI
Sbjct: 1009 GAIPCTGRCAGKCSGHINVITKDQETLFDLIEQIPDEEAKRTCLLKLKQSLEEQAPQKAI 1068

Query: 301  QNPIMYSYQDILNRVKGEAKMPIQVEDLHHEV 333
            QNPIMYSYQDILNRVKGEAKMPIQVEDLHHEV
Sbjct: 1069 QNPIMYSYQDILNRVKGEAKMPIQVEDLHHEV 1100

[Close]

BLAST of MELO3C000123 vs. NCBI nr
Match: TYJ97599.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 652.9 bits (1683), Expect = 1.5e-183
Identity = 329/332 (99.10%), Postives = 331/332 (99.70%), Query Frame = 0


Query: 1    MSRYKWYKDTFMARLYTLTTCGADIWKQKFVEGLPHYISQKFYQTMTANSVNQQIDWANL 60
            MSRYKWYKDTFMARLYTLTTCGADIWKQKFVEGLPHYISQKFYQTMTANSVNQQIDWANL
Sbjct: 769  MSRYKWYKDTFMARLYTLTTCGADIWKQKFVEGLPHYISQKFYQTMTANSVNQQIDWANL 828

Query: 61   TYGDISSTVQMICVNLCTENKHTTKVIKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKRY 120
            TYGDISSTVQMICVNLCTENKHTTKVIKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKRY
Sbjct: 829  TYGDISSTVQMICVNLCTENKHTTKVIKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKRY 888

Query: 121  SSKKFFRKSKAKDQESPRRRRRHYNKGKSKKGYSSKTHTICFKCNQKGHYANRCPLKDKI 180
            SSKKFFRKSK KDQESP+RR+RHYNKGKSKKGYSSKTHTICFKCNQKGHYANRCPLKDKI
Sbjct: 889  SSKKFFRKSKTKDQESPQRRKRHYNKGKSKKGYSSKTHTICFKCNQKGHYANRCPLKDKI 948

Query: 181  NAMTIDEETKQSLLYAIRSDDDTTSQTESSSEEDYINILQEEGSSSEEEFYSQSDSSDDE 240
            NAMTIDEETKQSLLYAIRSDDDTTSQTESSSEEDYINILQEEGSSSEEEFYSQSDSSDDE
Sbjct: 949  NAMTIDEETKQSLLYAIRSDDDTTSQTESSSEEDYINILQEEGSSSEEEFYSQSDSSDDE 1008

Query: 241  GAIPCTGRCAGKCSGHINVITKDQETLFDLIEQIPDEEAKRTCLLKLKQSLEEQAPQKAI 300
            GAIPCTGRCAGKCSGHINVITKDQETLFDLIEQIPDEEAKRTCLLKLKQSLEEQAPQKAI
Sbjct: 1009 GAIPCTGRCAGKCSGHINVITKDQETLFDLIEQIPDEEAKRTCLLKLKQSLEEQAPQKAI 1068

Query: 301  QNPIMYSYQDILNRVKGEAKMPIQVEDLHHEV 333
            QNPIMYSYQDILNRVKGEAKMPIQVEDLHHEV
Sbjct: 1069 QNPIMYSYQDILNRVKGEAKMPIQVEDLHHEV 1100

[Close]

BLAST of MELO3C000123 vs. NCBI nr
Match: TYJ98087.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 627.5 bits (1617), Expect = 6.7e-176
Identity = 319/332 (96.08%), Postives = 323/332 (97.29%), Query Frame = 0


Query: 1    MSRYKWYKDTFMARLYTLTTCGADIWKQKFVEGLPHYISQKFYQTMTANSVNQQIDWANL 60
            MSRYKWYKDTFMARLYTLTTCGADIWKQKFVEGLPHYISQKFYQTMTANSVNQQIDWANL
Sbjct: 768  MSRYKWYKDTFMARLYTLTTCGADIWKQKFVEGLPHYISQKFYQTMTANSVNQQIDWANL 827

Query: 61   TYGDISSTVQMICVNLCTENKHTTKVIKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKRY 120
            TYGDISSTVQMI VNLCTENKHTTKVIKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKRY
Sbjct: 828  TYGDISSTVQMINVNLCTENKHTTKVIKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKRY 887

Query: 121  SSKKFFRKSKAKDQESPRRRRRHYNKGKSKKGYSSKTHTICFKCNQKGHYANRCPLKDKI 180
            SSKKFFRK K KDQESP+RRR HY KGK KK YSSKT+TICFKCNQKGHYANRCPLKDKI
Sbjct: 888  SSKKFFRKGKVKDQESPQRRRHHYYKGKGKKKYSSKTNTICFKCNQKGHYANRCPLKDKI 947

Query: 181  NAMTIDEETKQSLLYAIRSDDDTTSQTESSSEEDYINILQEEGSSSEEEFYSQSDSSDDE 240
            NA+TIDEETKQSLLYAIR DDDT+SQTESSSEEDYINILQEEGSSSEEEFYSQSDSSDDE
Sbjct: 948  NALTIDEETKQSLLYAIRMDDDTSSQTESSSEEDYINILQEEGSSSEEEFYSQSDSSDDE 1007

Query: 241  GAIPCTGRCAGKCSGHINVITKDQETLFDLIEQIPDEEAKRTCLLKLKQSLEEQAPQKAI 300
            GAIPCTGRCAGKCSGHINVITKDQETLF LIEQIPDEEAKRTCLLKLKQSLEEQAPQKAI
Sbjct: 1008 GAIPCTGRCAGKCSGHINVITKDQETLFYLIEQIPDEEAKRTCLLKLKQSLEEQAPQKAI 1067

Query: 301  QNPIMYSYQDILNRVKGEAKMPIQVEDLHHEV 333
            QNPIMYSYQDILNRVKGEAKMPIQVEDLHHEV
Sbjct: 1068 QNPIMYSYQDILNRVKGEAKMPIQVEDLHHEV 1099

[Close]

BLAST of MELO3C000123 vs. NCBI nr
Match: KAA0052109.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 627.5 bits (1617), Expect = 6.7e-176
Identity = 319/332 (96.08%), Postives = 323/332 (97.29%), Query Frame = 0


Query: 1    MSRYKWYKDTFMARLYTLTTCGADIWKQKFVEGLPHYISQKFYQTMTANSVNQQIDWANL 60
            MSRYKWYKDTFMARLYTLTTCGADIWKQKFVEGLPHYISQKFYQTMTANSVNQQIDWANL
Sbjct: 768  MSRYKWYKDTFMARLYTLTTCGADIWKQKFVEGLPHYISQKFYQTMTANSVNQQIDWANL 827

Query: 61   TYGDISSTVQMICVNLCTENKHTTKVIKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKRY 120
            TYGDISSTVQMI VNLCTENKHTTKVIKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKRY
Sbjct: 828  TYGDISSTVQMINVNLCTENKHTTKVIKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKRY 887

Query: 121  SSKKFFRKSKAKDQESPRRRRRHYNKGKSKKGYSSKTHTICFKCNQKGHYANRCPLKDKI 180
            SSKKFFRK K KDQESP+RRR HY KGK KK YSSKT+TICFKCNQKGHYANRCPLKDKI
Sbjct: 888  SSKKFFRKGKVKDQESPQRRRHHYYKGKGKKKYSSKTNTICFKCNQKGHYANRCPLKDKI 947

Query: 181  NAMTIDEETKQSLLYAIRSDDDTTSQTESSSEEDYINILQEEGSSSEEEFYSQSDSSDDE 240
            NA+TIDEETKQSLLYAIR DDDT+SQTESSSEEDYINILQEEGSSSEEEFYSQSDSSDDE
Sbjct: 948  NALTIDEETKQSLLYAIRMDDDTSSQTESSSEEDYINILQEEGSSSEEEFYSQSDSSDDE 1007

Query: 241  GAIPCTGRCAGKCSGHINVITKDQETLFDLIEQIPDEEAKRTCLLKLKQSLEEQAPQKAI 300
            GAIPCTGRCAGKCSGHINVITKDQETLF LIEQIPDEEAKRTCLLKLKQSLEEQAPQKAI
Sbjct: 1008 GAIPCTGRCAGKCSGHINVITKDQETLFYLIEQIPDEEAKRTCLLKLKQSLEEQAPQKAI 1067

Query: 301  QNPIMYSYQDILNRVKGEAKMPIQVEDLHHEV 333
            QNPIMYSYQDILNRVKGEAKMPIQVEDLHHEV
Sbjct: 1068 QNPIMYSYQDILNRVKGEAKMPIQVEDLHHEV 1099

[Close]

BLAST of MELO3C000123 vs. NCBI nr
Match: TYK28081.1 (polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 614.0 bits (1582), Expect = 7.6e-172
Identity = 310/331 (93.66%), Postives = 318/331 (96.07%), Query Frame = 0


Query: 1   MSRYKWYKDTFMARLYTLTTCGADIWKQKFVEGLPHYISQKFYQTMTANSVNQQIDWANL 60
           MSRYKWYKDTFMARLYTLTTCGADIWKQKFVEGLPHYISQKFYQTMTANSVNQQI+WANL
Sbjct: 28  MSRYKWYKDTFMARLYTLTTCGADIWKQKFVEGLPHYISQKFYQTMTANSVNQQINWANL 87

Query: 61  TYGDISSTVQMICVNLCTENKHTTKVIKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKRY 120
           TYGDISSTVQMICVNLCTENKHTTKVIKDSDY KELGTFCKQYGLSQGPKEEKKKKKKRY
Sbjct: 88  TYGDISSTVQMICVNLCTENKHTTKVIKDSDYSKELGTFCKQYGLSQGPKEEKKKKKKRY 147

Query: 121 SSKKFFRKSKAKDQESPRRRRRHYNKGKSKKGYSSKTHTICFKCNQKGHYANRCPLKDKI 180
           SSK FFRK K KDQESP+RRR HY K K KK YSSKT+TICFKCNQKGHYAN CPLKDKI
Sbjct: 148 SSKNFFRKGKVKDQESPQRRRHHYYKDKGKKKYSSKTNTICFKCNQKGHYANCCPLKDKI 207

Query: 181 NAMTIDEETKQSLLYAIRSDDDTTSQTESSSEEDYINILQEEGSSSEEEFYSQSDSSDDE 240
           NA+TIDEETKQSLLYAIR+DDDT+SQTESSSEEDYINILQEEGSSSEE+FYSQSDSSDDE
Sbjct: 208 NALTIDEETKQSLLYAIRTDDDTSSQTESSSEEDYINILQEEGSSSEEKFYSQSDSSDDE 267

Query: 241 GAIPCTGRCAGKCSGHINVITKDQETLFDLIEQIPDEEAKRTCLLKLKQSLEEQAPQKAI 300
           GAIPCTGRCAGKCSGHINVITKDQETLFDLIE IPDEEAKRTCLLKLKQSLEEQ PQK I
Sbjct: 268 GAIPCTGRCAGKCSGHINVITKDQETLFDLIELIPDEEAKRTCLLKLKQSLEEQVPQKTI 327

Query: 301 QNPIMYSYQDILNRVKGEAKMPIQVEDLHHE 332
           QNPIMYSYQDILNRVKGEAK+PIQVEDLHHE
Sbjct: 328 QNPIMYSYQDILNRVKGEAKIPIQVEDLHHE 358

[Close]

BLAST of MELO3C000123 vs. ExPASy TrEMBL
Match: A0A5A7UR29 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold486G00660 PE=4 SV=1)

HSP 1 Score: 657.1 bits (1694), Expect = 3.8e-185
Identity = 332/332 (100.00%), Postives = 332/332 (100.00%), Query Frame = 0


Query: 1    MSRYKWYKDTFMARLYTLTTCGADIWKQKFVEGLPHYISQKFYQTMTANSVNQQIDWANL 60
            MSRYKWYKDTFMARLYTLTTCGADIWKQKFVEGLPHYISQKFYQTMTANSVNQQIDWANL
Sbjct: 769  MSRYKWYKDTFMARLYTLTTCGADIWKQKFVEGLPHYISQKFYQTMTANSVNQQIDWANL 828

Query: 61   TYGDISSTVQMICVNLCTENKHTTKVIKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKRY 120
            TYGDISSTVQMICVNLCTENKHTTKVIKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKRY
Sbjct: 829  TYGDISSTVQMICVNLCTENKHTTKVIKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKRY 888

Query: 121  SSKKFFRKSKAKDQESPRRRRRHYNKGKSKKGYSSKTHTICFKCNQKGHYANRCPLKDKI 180
            SSKKFFRKSKAKDQESPRRRRRHYNKGKSKKGYSSKTHTICFKCNQKGHYANRCPLKDKI
Sbjct: 889  SSKKFFRKSKAKDQESPRRRRRHYNKGKSKKGYSSKTHTICFKCNQKGHYANRCPLKDKI 948

Query: 181  NAMTIDEETKQSLLYAIRSDDDTTSQTESSSEEDYINILQEEGSSSEEEFYSQSDSSDDE 240
            NAMTIDEETKQSLLYAIRSDDDTTSQTESSSEEDYINILQEEGSSSEEEFYSQSDSSDDE
Sbjct: 949  NAMTIDEETKQSLLYAIRSDDDTTSQTESSSEEDYINILQEEGSSSEEEFYSQSDSSDDE 1008

Query: 241  GAIPCTGRCAGKCSGHINVITKDQETLFDLIEQIPDEEAKRTCLLKLKQSLEEQAPQKAI 300
            GAIPCTGRCAGKCSGHINVITKDQETLFDLIEQIPDEEAKRTCLLKLKQSLEEQAPQKAI
Sbjct: 1009 GAIPCTGRCAGKCSGHINVITKDQETLFDLIEQIPDEEAKRTCLLKLKQSLEEQAPQKAI 1068

Query: 301  QNPIMYSYQDILNRVKGEAKMPIQVEDLHHEV 333
            QNPIMYSYQDILNRVKGEAKMPIQVEDLHHEV
Sbjct: 1069 QNPIMYSYQDILNRVKGEAKMPIQVEDLHHEV 1100

[Close]

BLAST of MELO3C000123 vs. ExPASy TrEMBL
Match: A0A5D3BEY3 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold690G00300 PE=4 SV=1)

HSP 1 Score: 652.9 bits (1683), Expect = 7.2e-184
Identity = 329/332 (99.10%), Postives = 331/332 (99.70%), Query Frame = 0


Query: 1    MSRYKWYKDTFMARLYTLTTCGADIWKQKFVEGLPHYISQKFYQTMTANSVNQQIDWANL 60
            MSRYKWYKDTFMARLYTLTTCGADIWKQKFVEGLPHYISQKFYQTMTANSVNQQIDWANL
Sbjct: 769  MSRYKWYKDTFMARLYTLTTCGADIWKQKFVEGLPHYISQKFYQTMTANSVNQQIDWANL 828

Query: 61   TYGDISSTVQMICVNLCTENKHTTKVIKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKRY 120
            TYGDISSTVQMICVNLCTENKHTTKVIKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKRY
Sbjct: 829  TYGDISSTVQMICVNLCTENKHTTKVIKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKRY 888

Query: 121  SSKKFFRKSKAKDQESPRRRRRHYNKGKSKKGYSSKTHTICFKCNQKGHYANRCPLKDKI 180
            SSKKFFRKSK KDQESP+RR+RHYNKGKSKKGYSSKTHTICFKCNQKGHYANRCPLKDKI
Sbjct: 889  SSKKFFRKSKTKDQESPQRRKRHYNKGKSKKGYSSKTHTICFKCNQKGHYANRCPLKDKI 948

Query: 181  NAMTIDEETKQSLLYAIRSDDDTTSQTESSSEEDYINILQEEGSSSEEEFYSQSDSSDDE 240
            NAMTIDEETKQSLLYAIRSDDDTTSQTESSSEEDYINILQEEGSSSEEEFYSQSDSSDDE
Sbjct: 949  NAMTIDEETKQSLLYAIRSDDDTTSQTESSSEEDYINILQEEGSSSEEEFYSQSDSSDDE 1008

Query: 241  GAIPCTGRCAGKCSGHINVITKDQETLFDLIEQIPDEEAKRTCLLKLKQSLEEQAPQKAI 300
            GAIPCTGRCAGKCSGHINVITKDQETLFDLIEQIPDEEAKRTCLLKLKQSLEEQAPQKAI
Sbjct: 1009 GAIPCTGRCAGKCSGHINVITKDQETLFDLIEQIPDEEAKRTCLLKLKQSLEEQAPQKAI 1068

Query: 301  QNPIMYSYQDILNRVKGEAKMPIQVEDLHHEV 333
            QNPIMYSYQDILNRVKGEAKMPIQVEDLHHEV
Sbjct: 1069 QNPIMYSYQDILNRVKGEAKMPIQVEDLHHEV 1100

[Close]

BLAST of MELO3C000123 vs. ExPASy TrEMBL
Match: A0A5D3BG41 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold565G00200 PE=4 SV=1)

HSP 1 Score: 627.5 bits (1617), Expect = 3.2e-176
Identity = 319/332 (96.08%), Postives = 323/332 (97.29%), Query Frame = 0


Query: 1    MSRYKWYKDTFMARLYTLTTCGADIWKQKFVEGLPHYISQKFYQTMTANSVNQQIDWANL 60
            MSRYKWYKDTFMARLYTLTTCGADIWKQKFVEGLPHYISQKFYQTMTANSVNQQIDWANL
Sbjct: 768  MSRYKWYKDTFMARLYTLTTCGADIWKQKFVEGLPHYISQKFYQTMTANSVNQQIDWANL 827

Query: 61   TYGDISSTVQMICVNLCTENKHTTKVIKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKRY 120
            TYGDISSTVQMI VNLCTENKHTTKVIKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKRY
Sbjct: 828  TYGDISSTVQMINVNLCTENKHTTKVIKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKRY 887

Query: 121  SSKKFFRKSKAKDQESPRRRRRHYNKGKSKKGYSSKTHTICFKCNQKGHYANRCPLKDKI 180
            SSKKFFRK K KDQESP+RRR HY KGK KK YSSKT+TICFKCNQKGHYANRCPLKDKI
Sbjct: 888  SSKKFFRKGKVKDQESPQRRRHHYYKGKGKKKYSSKTNTICFKCNQKGHYANRCPLKDKI 947

Query: 181  NAMTIDEETKQSLLYAIRSDDDTTSQTESSSEEDYINILQEEGSSSEEEFYSQSDSSDDE 240
            NA+TIDEETKQSLLYAIR DDDT+SQTESSSEEDYINILQEEGSSSEEEFYSQSDSSDDE
Sbjct: 948  NALTIDEETKQSLLYAIRMDDDTSSQTESSSEEDYINILQEEGSSSEEEFYSQSDSSDDE 1007

Query: 241  GAIPCTGRCAGKCSGHINVITKDQETLFDLIEQIPDEEAKRTCLLKLKQSLEEQAPQKAI 300
            GAIPCTGRCAGKCSGHINVITKDQETLF LIEQIPDEEAKRTCLLKLKQSLEEQAPQKAI
Sbjct: 1008 GAIPCTGRCAGKCSGHINVITKDQETLFYLIEQIPDEEAKRTCLLKLKQSLEEQAPQKAI 1067

Query: 301  QNPIMYSYQDILNRVKGEAKMPIQVEDLHHEV 333
            QNPIMYSYQDILNRVKGEAKMPIQVEDLHHEV
Sbjct: 1068 QNPIMYSYQDILNRVKGEAKMPIQVEDLHHEV 1099

[Close]

BLAST of MELO3C000123 vs. ExPASy TrEMBL
Match: A0A5A7UF59 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold578G00970 PE=4 SV=1)

HSP 1 Score: 627.5 bits (1617), Expect = 3.2e-176
Identity = 319/332 (96.08%), Postives = 323/332 (97.29%), Query Frame = 0


Query: 1    MSRYKWYKDTFMARLYTLTTCGADIWKQKFVEGLPHYISQKFYQTMTANSVNQQIDWANL 60
            MSRYKWYKDTFMARLYTLTTCGADIWKQKFVEGLPHYISQKFYQTMTANSVNQQIDWANL
Sbjct: 768  MSRYKWYKDTFMARLYTLTTCGADIWKQKFVEGLPHYISQKFYQTMTANSVNQQIDWANL 827

Query: 61   TYGDISSTVQMICVNLCTENKHTTKVIKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKRY 120
            TYGDISSTVQMI VNLCTENKHTTKVIKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKRY
Sbjct: 828  TYGDISSTVQMINVNLCTENKHTTKVIKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKRY 887

Query: 121  SSKKFFRKSKAKDQESPRRRRRHYNKGKSKKGYSSKTHTICFKCNQKGHYANRCPLKDKI 180
            SSKKFFRK K KDQESP+RRR HY KGK KK YSSKT+TICFKCNQKGHYANRCPLKDKI
Sbjct: 888  SSKKFFRKGKVKDQESPQRRRHHYYKGKGKKKYSSKTNTICFKCNQKGHYANRCPLKDKI 947

Query: 181  NAMTIDEETKQSLLYAIRSDDDTTSQTESSSEEDYINILQEEGSSSEEEFYSQSDSSDDE 240
            NA+TIDEETKQSLLYAIR DDDT+SQTESSSEEDYINILQEEGSSSEEEFYSQSDSSDDE
Sbjct: 948  NALTIDEETKQSLLYAIRMDDDTSSQTESSSEEDYINILQEEGSSSEEEFYSQSDSSDDE 1007

Query: 241  GAIPCTGRCAGKCSGHINVITKDQETLFDLIEQIPDEEAKRTCLLKLKQSLEEQAPQKAI 300
            GAIPCTGRCAGKCSGHINVITKDQETLF LIEQIPDEEAKRTCLLKLKQSLEEQAPQKAI
Sbjct: 1008 GAIPCTGRCAGKCSGHINVITKDQETLFYLIEQIPDEEAKRTCLLKLKQSLEEQAPQKAI 1067

Query: 301  QNPIMYSYQDILNRVKGEAKMPIQVEDLHHEV 333
            QNPIMYSYQDILNRVKGEAKMPIQVEDLHHEV
Sbjct: 1068 QNPIMYSYQDILNRVKGEAKMPIQVEDLHHEV 1099

[Close]

BLAST of MELO3C000123 vs. ExPASy TrEMBL
Match: A0A5D3DWR4 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G003450 PE=4 SV=1)

HSP 1 Score: 614.0 bits (1582), Expect = 3.7e-172
Identity = 310/331 (93.66%), Postives = 318/331 (96.07%), Query Frame = 0


Query: 1   MSRYKWYKDTFMARLYTLTTCGADIWKQKFVEGLPHYISQKFYQTMTANSVNQQIDWANL 60
           MSRYKWYKDTFMARLYTLTTCGADIWKQKFVEGLPHYISQKFYQTMTANSVNQQI+WANL
Sbjct: 28  MSRYKWYKDTFMARLYTLTTCGADIWKQKFVEGLPHYISQKFYQTMTANSVNQQINWANL 87

Query: 61  TYGDISSTVQMICVNLCTENKHTTKVIKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKRY 120
           TYGDISSTVQMICVNLCTENKHTTKVIKDSDY KELGTFCKQYGLSQGPKEEKKKKKKRY
Sbjct: 88  TYGDISSTVQMICVNLCTENKHTTKVIKDSDYSKELGTFCKQYGLSQGPKEEKKKKKKRY 147

Query: 121 SSKKFFRKSKAKDQESPRRRRRHYNKGKSKKGYSSKTHTICFKCNQKGHYANRCPLKDKI 180
           SSK FFRK K KDQESP+RRR HY K K KK YSSKT+TICFKCNQKGHYAN CPLKDKI
Sbjct: 148 SSKNFFRKGKVKDQESPQRRRHHYYKDKGKKKYSSKTNTICFKCNQKGHYANCCPLKDKI 207

Query: 181 NAMTIDEETKQSLLYAIRSDDDTTSQTESSSEEDYINILQEEGSSSEEEFYSQSDSSDDE 240
           NA+TIDEETKQSLLYAIR+DDDT+SQTESSSEEDYINILQEEGSSSEE+FYSQSDSSDDE
Sbjct: 208 NALTIDEETKQSLLYAIRTDDDTSSQTESSSEEDYINILQEEGSSSEEKFYSQSDSSDDE 267

Query: 241 GAIPCTGRCAGKCSGHINVITKDQETLFDLIEQIPDEEAKRTCLLKLKQSLEEQAPQKAI 300
           GAIPCTGRCAGKCSGHINVITKDQETLFDLIE IPDEEAKRTCLLKLKQSLEEQ PQK I
Sbjct: 268 GAIPCTGRCAGKCSGHINVITKDQETLFDLIELIPDEEAKRTCLLKLKQSLEEQVPQKTI 327

Query: 301 QNPIMYSYQDILNRVKGEAKMPIQVEDLHHE 332
           QNPIMYSYQDILNRVKGEAK+PIQVEDLHHE
Sbjct: 328 QNPIMYSYQDILNRVKGEAKIPIQVEDLHHE 358

The following BLAST results are available for this feature:

BLAST of MELO3C000123 vs.


Match Name	E-value	Identity	Description

BLAST of MELO3C000123 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0056776.1	7.9e-185	100.00	Enzymatic polyprotein [Cucumis melo var. makuwa]	[more]
TYJ97599.1	1.5e-183	99.10	Enzymatic polyprotein [Cucumis melo var. makuwa]	[more]
TYJ98087.1	6.7e-176	96.08	Enzymatic polyprotein [Cucumis melo var. makuwa]	[more]
KAA0052109.1	6.7e-176	96.08	Enzymatic polyprotein [Cucumis melo var. makuwa]	[more]
TYK28081.1	7.6e-172	93.66	polyprotein [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C000123 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UR29	3.8e-185	100.00	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold48...	[more]
A0A5D3BEY3	7.2e-184	99.10	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold69...	[more]
A0A5D3BG41	3.2e-176	96.08	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold56...	[more]
A0A5A7UF59	3.2e-176	96.08	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57...	[more]
A0A5D3DWR4	3.7e-172	93.66	Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G003450 P...	[more]

BLAST of MELO3C000123 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 160..176 e-value: 0.0051 score: 25.4
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 161..175 e-value: 7.0E-5 score: 22.7
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 161..175 score: 9.982374
None	No IPR available	GENE3D	4.10.60.10		coord: 152..209 e-value: 1.5E-6 score: 30.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 109..154
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..126
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..153
None	No IPR available	PANTHER	PTHR46249	FAMILY NOT NAMED	coord: 88..332
None	No IPR available	PANTHER	PTHR46249:SF33	VIRAL MOVEMENT PROTEIN-RELATED	coord: 88..332
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 144..179

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C000123.1	MELO3C000123.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding