MELO3C000026 (gene) Melon (DHL92) v4

Overview


Name	MELO3C000026
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	DUF4228 domain-containing protein
Location	chr08: 1491112 .. 1491468 (+)
RNA-Seq Expression	MELO3C000026
Synteny	MELO3C000026

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAACGCCATTAGATGCTGCATCTCCTGCATACTCCCATGTGGCTCTCTCGACGTCATCAGAATCGTCCATTGCGACGGCCACGTCCAAGAAATCGCCGGCTCCATCCGCGCCAGTGATGTCATGAAGGCCAATCCTAAACACGTGCTCAAAAAACCCTCCTCCCCCACCTCCGACGACCGCGTCGTCCCTAAGATTGTGATCCTCCCCCCCGACGCCGAGCTCCAACGGGGAAAAATTTACTTTCTCATGCCCCTTCCTCCTGCCCCGGAAAAGCCCCGCTCCAAATCTCTGACCAAGAAGAAAAAGAAGGAATTACCATTACCCGGAACCGGCGTGGGTTCAAGTATATCG

mRNA sequence

ATGAAGAACGCCATTAGATGCTGCATCTCCTGCATACTCCCATGTGGCTCTCTCGACGTCATCAGAATCGTCCATTGCGACGGCCACGTCCAAGAAATCGCCGGCTCCATCCGCGCCAGTGATGTCATGAAGGCCAATCCTAAACACGTGCTCAAAAAACCCTCCTCCCCCACCTCCGACGACCGCGTCGTCCCTAAGATTGTGATCCTCCCCCCCGACGCCGAGCTCCAACGGGGAAAAATTTACTTTCTCATGCCCCTTCCTCCTGCCCCGGAAAAGCCCCGCTCCAAATCTCTGACCAAGAAGAAAAAGAAGGAATTACCATTACCCGGAACCGGCGTGGGTTCAAGTATATCG

Coding sequence (CDS)

ATGAAGAACGCCATTAGATGCTGCATCTCCTGCATACTCCCATGTGGCTCTCTCGACGTCATCAGAATCGTCCATTGCGACGGCCACGTCCAAGAAATCGCCGGCTCCATCCGCGCCAGTGATGTCATGAAGGCCAATCCTAAACACGTGCTCAAAAAACCCTCCTCCCCCACCTCCGACGACCGCGTCGTCCCTAAGATTGTGATCCTCCCCCCCGACGCCGAGCTCCAACGGGGAAAAATTTACTTTCTCATGCCCCTTCCTCCTGCCCCGGAAAAGCCCCGCTCCAAATCTCTGACCAAGAAGAAAAAGAAGGAATTACCATTACCCGGAACCGGCGTGGGTTCAAGTATATCG

Protein sequence

MKNAIRCCISCILPCGSLDVIRIVHCDGHVQEIAGSIRASDVMKANPKHVLKKPSSPTSDDRVVPKIVILPPDAELQRGKIYFLMPLPPAPEKPRSKSLTKKKKKELPLPGTGVGSSIS

Homology

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BLAST of MELO3C000026 vs. NCBI nr
Match: KAA0052618.1 (DUF4228 domain-containing protein [Cucumis melo var. makuwa] >TYK13210.1 DUF4228 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 237.3 bits (604), Expect = 7.0e-59
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 1   MKNAIRCCISCILPCGSLDVIRIVHCDGHVQEIAGSIRASDVMKANPKHVLKKPSSPTSD 60
           MKNAIRCCISCILPCGSLDVIRIVHCDGHVQEIAGSIRASDVMKANPKHVLKKPSSPTSD
Sbjct: 1   MKNAIRCCISCILPCGSLDVIRIVHCDGHVQEIAGSIRASDVMKANPKHVLKKPSSPTSD 60

Query: 61  DRVVPKIVILPPDAELQRGKIYFLMPLPPAPEKPRSKSLTKKKKKELPLPGTGVGSSIS 120
           DRVVPKIVILPPDAELQRGKIYFLMPLPPAPEKPRSKSLTKKKKKELPLPGTGVGSSIS
Sbjct: 61  DRVVPKIVILPPDAELQRGKIYFLMPLPPAPEKPRSKSLTKKKKKELPLPGTGVGSSIS 119

[Close]

BLAST of MELO3C000026 vs. NCBI nr
Match: XP_031742479.1 (uncharacterized protein LOC101214777 [Cucumis sativus] >KGN49308.1 hypothetical protein Csa_003542 [Cucumis sativus])

HSP 1 Score: 233.4 bits (594), Expect = 1.0e-57
Identity = 116/119 (97.48%), Postives = 118/119 (99.16%), Query Frame = 0


Query: 1   MKNAIRCCISCILPCGSLDVIRIVHCDGHVQEIAGSIRASDVMKANPKHVLKKPSSPTSD 60
           MKNAIRCC+SCILPCGSLDVIRIVHCDGHVQEIAGSIRASDVMKANPKHVLKKPSSPTSD
Sbjct: 1   MKNAIRCCLSCILPCGSLDVIRIVHCDGHVQEIAGSIRASDVMKANPKHVLKKPSSPTSD 60

Query: 61  DRVVPKIVILPPDAELQRGKIYFLMPLPPAPEKPRSKSLTKKKKKELPLPGTGVGSSIS 120
           DRVVPKIVILPPDAELQRGKIYFLMPLPPAPEKPRSKSL+KKKKKELPLPGTGVGS IS
Sbjct: 61  DRVVPKIVILPPDAELQRGKIYFLMPLPPAPEKPRSKSLSKKKKKELPLPGTGVGSGIS 119

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BLAST of MELO3C000026 vs. NCBI nr
Match: XP_038882770.1 (uncharacterized protein LOC120073923 [Benincasa hispida])

HSP 1 Score: 215.3 bits (547), Expect = 2.8e-52
Identity = 109/119 (91.60%), Postives = 114/119 (95.80%), Query Frame = 0


Query: 1   MKNAIRCCISCILPCGSLDVIRIVHCDGHVQEIAGSIRASDVMKANPKHVLKKPSSPTSD 60
           MKN IRCCISCILPCGSLDVIRIVHC+GHV+EIAG+IRASDVMKANPKHVLKKPSSPTSD
Sbjct: 1   MKNTIRCCISCILPCGSLDVIRIVHCNGHVEEIAGTIRASDVMKANPKHVLKKPSSPTSD 60

Query: 61  DRVVPKIVILPPDAELQRGKIYFLMPLPPAPEKPRSKSLTKKKKKELPLPGTGVGSSIS 120
           DRVVPKIVILPPDA+LQRGKIYFLMPLPPAPEKPRSKSLT KKKK+  LPGTGVGS IS
Sbjct: 61  DRVVPKIVILPPDAQLQRGKIYFLMPLPPAPEKPRSKSLTTKKKKK-ELPGTGVGSGIS 118

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BLAST of MELO3C000026 vs. NCBI nr
Match: XP_023543275.1 (uncharacterized protein LOC111803203 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023543276.1 uncharacterized protein LOC111803203 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 188.3 bits (477), Expect = 3.7e-44
Identity = 100/119 (84.03%), Postives = 106/119 (89.08%), Query Frame = 0


Query: 1   MKNAIRCCISCILPCGSLDVIRIVHCDGHVQEIAGSIRASDVMKANPKHVLKKPSSPTSD 60
           MKNAIRCCISCI PCGSLDVIRIVHC+GHV+EIAGSIRASD+MKANPKHVLKKP+SP SD
Sbjct: 42  MKNAIRCCISCIFPCGSLDVIRIVHCNGHVEEIAGSIRASDIMKANPKHVLKKPTSP-SD 101

Query: 61  DRVVPKIVILPPDAELQRGKIYFLMPLPPAPEKPRSKSLTKKKKKELPLPGTGVGSSIS 120
             VVPKIVILPPDAELQRGKIYFLMPLPP+PEK RSK   KKKK+E   PGT VGS IS
Sbjct: 102 QGVVPKIVILPPDAELQRGKIYFLMPLPPSPEKTRSK---KKKKRE--TPGTDVGSGIS 154

[Close]

BLAST of MELO3C000026 vs. NCBI nr
Match: XP_022925910.1 (uncharacterized protein LOC111433184 [Cucurbita moschata])

HSP 1 Score: 187.2 bits (474), Expect = 8.3e-44
Identity = 100/119 (84.03%), Postives = 105/119 (88.24%), Query Frame = 0


Query: 1   MKNAIRCCISCILPCGSLDVIRIVHCDGHVQEIAGSIRASDVMKANPKHVLKKPSSPTSD 60
           MKNAIRCCISCI PCGSLDVIRIVHC+GHV+EIAGSIRASD+MKANPKHVLKKPSSP SD
Sbjct: 42  MKNAIRCCISCIFPCGSLDVIRIVHCNGHVEEIAGSIRASDIMKANPKHVLKKPSSP-SD 101

Query: 61  DRVVPKIVILPPDAELQRGKIYFLMPLPPAPEKPRSKSLTKKKKKELPLPGTGVGSSIS 120
             VVPKIVILPPDAELQRGKIYFLMPLPP+PEK RS    KKKK+E   PGT VGS IS
Sbjct: 102 HGVVPKIVILPPDAELQRGKIYFLMPLPPSPEKTRS----KKKKRE--APGTDVGSGIS 153

[Close]

BLAST of MELO3C000026 vs. ExPASy TrEMBL
Match: A0A5D3CP55 (DUF4228 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008230 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 3.4e-59
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 1   MKNAIRCCISCILPCGSLDVIRIVHCDGHVQEIAGSIRASDVMKANPKHVLKKPSSPTSD 60
           MKNAIRCCISCILPCGSLDVIRIVHCDGHVQEIAGSIRASDVMKANPKHVLKKPSSPTSD
Sbjct: 1   MKNAIRCCISCILPCGSLDVIRIVHCDGHVQEIAGSIRASDVMKANPKHVLKKPSSPTSD 60

Query: 61  DRVVPKIVILPPDAELQRGKIYFLMPLPPAPEKPRSKSLTKKKKKELPLPGTGVGSSIS 120
           DRVVPKIVILPPDAELQRGKIYFLMPLPPAPEKPRSKSLTKKKKKELPLPGTGVGSSIS
Sbjct: 61  DRVVPKIVILPPDAELQRGKIYFLMPLPPAPEKPRSKSLTKKKKKELPLPGTGVGSSIS 119

[Close]

BLAST of MELO3C000026 vs. ExPASy TrEMBL
Match: A0A0A0KI99 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519600 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 4.9e-58
Identity = 116/119 (97.48%), Postives = 118/119 (99.16%), Query Frame = 0


Query: 1   MKNAIRCCISCILPCGSLDVIRIVHCDGHVQEIAGSIRASDVMKANPKHVLKKPSSPTSD 60
           MKNAIRCC+SCILPCGSLDVIRIVHCDGHVQEIAGSIRASDVMKANPKHVLKKPSSPTSD
Sbjct: 1   MKNAIRCCLSCILPCGSLDVIRIVHCDGHVQEIAGSIRASDVMKANPKHVLKKPSSPTSD 60

Query: 61  DRVVPKIVILPPDAELQRGKIYFLMPLPPAPEKPRSKSLTKKKKKELPLPGTGVGSSIS 120
           DRVVPKIVILPPDAELQRGKIYFLMPLPPAPEKPRSKSL+KKKKKELPLPGTGVGS IS
Sbjct: 61  DRVVPKIVILPPDAELQRGKIYFLMPLPPAPEKPRSKSLSKKKKKELPLPGTGVGSGIS 119

[Close]

BLAST of MELO3C000026 vs. ExPASy TrEMBL
Match: A0A6J1IUZ9 (uncharacterized protein LOC111478638 OS=Cucurbita maxima OX=3661 GN=LOC111478638 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 4.0e-44
Identity = 100/119 (84.03%), Postives = 105/119 (88.24%), Query Frame = 0


Query: 1   MKNAIRCCISCILPCGSLDVIRIVHCDGHVQEIAGSIRASDVMKANPKHVLKKPSSPTSD 60
           MKNAIRCCISCI PCGSLDVIRIVHC+GHV+EIAGSIRASD+MKANPKHVLKKPSSP SD
Sbjct: 1   MKNAIRCCISCIFPCGSLDVIRIVHCNGHVEEIAGSIRASDIMKANPKHVLKKPSSP-SD 60

Query: 61  DRVVPKIVILPPDAELQRGKIYFLMPLPPAPEKPRSKSLTKKKKKELPLPGTGVGSSIS 120
             VVPKIVILPPDAELQRGKIYFLMPLPP+PEK RS    KKKK+E   PGT VGS IS
Sbjct: 61  HGVVPKIVILPPDAELQRGKIYFLMPLPPSPEKTRS----KKKKRE--APGTDVGSGIS 112

[Close]

BLAST of MELO3C000026 vs. ExPASy TrEMBL
Match: A0A6J1EJJ7 (uncharacterized protein LOC111433184 OS=Cucurbita moschata OX=3662 GN=LOC111433184 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 4.0e-44
Identity = 100/119 (84.03%), Postives = 105/119 (88.24%), Query Frame = 0


Query: 1   MKNAIRCCISCILPCGSLDVIRIVHCDGHVQEIAGSIRASDVMKANPKHVLKKPSSPTSD 60
           MKNAIRCCISCI PCGSLDVIRIVHC+GHV+EIAGSIRASD+MKANPKHVLKKPSSP SD
Sbjct: 42  MKNAIRCCISCIFPCGSLDVIRIVHCNGHVEEIAGSIRASDIMKANPKHVLKKPSSP-SD 101

Query: 61  DRVVPKIVILPPDAELQRGKIYFLMPLPPAPEKPRSKSLTKKKKKELPLPGTGVGSSIS 120
             VVPKIVILPPDAELQRGKIYFLMPLPP+PEK RS    KKKK+E   PGT VGS IS
Sbjct: 102 HGVVPKIVILPPDAELQRGKIYFLMPLPPSPEKTRS----KKKKRE--APGTDVGSGIS 153

[Close]

BLAST of MELO3C000026 vs. ExPASy TrEMBL
Match: A0A5N6Q9J4 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_000611 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.9e-38
Identity = 83/106 (78.30%), Postives = 97/106 (91.51%), Query Frame = 0


Query: 1   MKNAIRCCISCILPCGSLDVIRIVHCDGHVQEIAGSIRASDVMKANPKHVLKKPSSPTSD 60
           MKN IRCCISCILPCG+LDVIRIVHC+G V+EI+GSIRAS++MKA+PKHVLKKPSS +S+
Sbjct: 1   MKNTIRCCISCILPCGALDVIRIVHCNGRVEEISGSIRASEIMKAHPKHVLKKPSS-SSE 60

Query: 61  DRVVPKIVILPPDAELQRGKIYFLMPLPPAPEKPRSKSLTKKKKKE 107
           D  VPKIVI+PPDAELQRGKIYFLMP+P  PEK RS+S T+KKK+E
Sbjct: 61  DGCVPKIVIVPPDAELQRGKIYFLMPVPSTPEKTRSRSSTRKKKRE 105

[Close]

BLAST of MELO3C000026 vs. TAIR 10
Match: AT1G29195.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30230.1); Has 180 Blast hits to 180 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 180; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 131.3 bits (329), Expect = 5.0e-31
Identity = 72/120 (60.00%), Postives = 90/120 (75.00%), Query Frame = 0


Query: 1   MKNAIRCCISCILPCGSLDVIRIVHCDGHVQEIAGSIRASDVMKANPKHVLKKPSSPTS- 60
           MK  IRCCI+CILPCG+LDVIRIVH +GHV+EI+G+I AS++MKA+PKHVLKKPSSPTS 
Sbjct: 1   MKETIRCCIACILPCGALDVIRIVHSNGHVEEISGTITASEIMKAHPKHVLKKPSSPTSD 60

Query: 61  -DDRVV---PKIVILPPDAELQRGKIYFLMPLPPAP----------EKPRSKSLTKKKKK 106
            D+R V    KIVI+PP+AELQRGKIYFLMP   +           EK  + ++ KK+ +
Sbjct: 61  HDERDVISATKIVIVPPEAELQRGKIYFLMPATKSDKCAGGGKIRREKSNANAVVKKRSQ 120

[Close]

BLAST of MELO3C000026 vs. TAIR 10
Match: AT1G06980.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: sepal, male gametophyte, carpel; EXPRESSED DURING: 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30230.1); Has 159 Blast hits to 159 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 159; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 114.8 bits (286), Expect = 4.8e-26
Identity = 58/110 (52.73%), Postives = 80/110 (72.73%), Query Frame = 0


Query: 1   MKNAIRCCISCILPCGSLDVIRIVHCDGHVQEIAGSIRASDVMKANPKHVLKKPSSPTSD 60
           M N++RCC++C+LPCG+LD+IRIVH +G+V+EI  SI A ++++ANP HVL KP S    
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGYVEEITRSITAGEILQANPNHVLSKPCS---- 60

Query: 61  DRVVPKIVILPPDAELQRGKIYFLMPLPPAPEKPRSKSLTKKKKKELPLP 111
             VV KI+IL P++EL+RG IYFL+P    PEK R +  T ++KK L  P
Sbjct: 61  QGVVRKILILSPESELKRGSIYFLIPDSSLPEKKRRRKDTPRRKKNLQNP 106

[Close]

BLAST of MELO3C000026 vs. TAIR 10
Match: AT2G30230.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G06980.1); Has 167 Blast hits to 167 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 109.8 bits (273), Expect = 1.6e-24
Identity = 54/109 (49.54%), Postives = 78/109 (71.56%), Query Frame = 0


Query: 1   MKNAIRCCISCILPCGSLDVIRIVHCDGHVQEIAGSIRASDVMKANPKHVLKKPSSPTSD 60
           M N++RCC++C+LPCG+LD+IRIVH +GHV EI   + A ++++ANP HVL KP S    
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVDEITSPMTAGEILQANPNHVLSKPCS---- 60

Query: 61  DRVVPKIVILPPDAELQRGKIYFLMPLPPAPEKPRSKSLTKKKKKELPL 110
             VV KI+IL P++EL+RG IYFL+P    PEK ++K   + + ++ PL
Sbjct: 61  QGVVRKILILSPESELKRGSIYFLIPDTSMPEKKKTKKRKELRCRKKPL 105

The following BLAST results are available for this feature:

BLAST of MELO3C000026 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0052618.1	7.0e-59	100.00	DUF4228 domain-containing protein [Cucumis melo var. makuwa] >TYK13210.1 DUF4228...	[more]
XP_031742479.1	1.0e-57	97.48	uncharacterized protein LOC101214777 [Cucumis sativus] >KGN49308.1 hypothetical ...	[more]
XP_038882770.1	2.8e-52	91.60	uncharacterized protein LOC120073923 [Benincasa hispida]	[more]
XP_023543275.1	3.7e-44	84.03	uncharacterized protein LOC111803203 isoform X1 [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_022925910.1	8.3e-44	84.03	uncharacterized protein LOC111433184 [Cucurbita moschata]	[more]

BLAST of MELO3C000026 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C000026 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CP55	3.4e-59	100.00	DUF4228 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A0A0KI99	4.9e-58	97.48	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519600 PE=4 SV=1	[more]
A0A6J1IUZ9	4.0e-44	84.03	uncharacterized protein LOC111478638 OS=Cucurbita maxima OX=3661 GN=LOC111478638...	[more]
A0A6J1EJJ7	4.0e-44	84.03	uncharacterized protein LOC111433184 OS=Cucurbita moschata OX=3662 GN=LOC1114331...	[more]
A0A5N6Q9J4	1.9e-38	78.30	Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_000611 PE=4 SV=1	[more]

BLAST of MELO3C000026 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G29195.1	5.0e-31	60.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G06980.1	4.8e-26	52.73	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G30230.1	1.6e-24	49.54	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 6..103 e-value: 1.9E-25 score: 90.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..119
None	No IPR available	PANTHER	PTHR33052:SF3	OS01G0758500 PROTEIN	coord: 1..102
None	No IPR available	PANTHER	PTHR33052	DUF4228 DOMAIN PROTEIN-RELATED	coord: 1..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C000026.1	MELO3C000026.1	mRNA