MELO.jh102892.1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh102892.1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Retrotransposon protein
Location	chr12: 17494192 .. 17495517 (+)
RNA-Seq Expression	MELO.jh102892.1
Synteny	MELO.jh102892.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGAACAAACACTTATTGGAGTTCTAACTGCATTCACGTTGGCCCAACGTCAGATTTTACTAACGTTGGAGCTATTAATGAACAACAATAAGCGTCTCCCACATACACCGCCCGATACACGCCATAGAATTAGGGAGCTTGCTTACTTTCGCATGATACACGAGTCAGATCTTGTGTGTCGGCAAAGCACGCGGATGGATAGGCGAACATTCGCAATTCTATGCCATTTACTTAGAAATGTCGCTGGTCTTTCTTCAACTGAAATTGTCGATGTTGAGGAAATGGTAGCAATGTTCTTGCACGTCCTCGCTCATGACGTGAAGAACCGCGTCATACAACGAGAATTTGTACGCTCCGGTGAGACAGTATCTCGACATTTCAACATCGTATTGTTGGCTGTTCTTCGACTGTACGAGGAGTTGATAAAAAGACCTGTTCCGGTAACAAGTAACTGCAATGATCAACGTTGGAAGTGTTTCGAGGTGGGCATCCTACAAGTTCACTATAATTGACCTTTAGGTACATCGCAGTTAATTCATTGTGTTCCTTTCAACCTGCAGAGCTGCCTTGGCGCGTTAGACGGGACGTACATAAAGGTGAACGTCCCCGCAGGAGATCGACCTACTTTCAGAACGCGTAAGGGGGAAATTGCCACAAACGTTCTTGGGGTCTGTGACACGAAAGGGGATTTCGTTTATGTCCTTGCCGGTTGGGAAGGATCTGCAGCAGACTCGCGGATCCTACGTGATGCGATTTCACGAGAAAATGGACTACAAGTGCCAAAGGGTATATAATTTTTATAATAAAACACCGTCGCTTCTTACTTACCTATTTAAAGTTCATAAACAAACCATTTAATAACAGGATATTATTATCTGTGCGATGCTGGATATCCAAACGCGGAGGGGTTTCTCGCCCCGTACAGAGGCCAGCGGTACCATTTGCAAGAGTGGCGTGGTGCTGCAAATGCGCCAACAAATGCAAAGGAGTACTTCAACATGAAGCACTCCTCGGCAAGGAATGTTATTGAGCGCGCGTTCGGTGTTCTAAAGGGTCGTTGGGCCATTCTTCGTGGAAAGTCGTATTATCCCCTGCAAGTCCAGTGTCGCACCATTCTAGCATGTGCGTTGCTTCACAATTTGATCAACAGGGAAATGACATATTGCGACGACGTTGAGGACGAGGACGAGGGGGACTCCACGTACGCAACGACCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCAGTGGCGCGACAACCTAGCCGCATCGATGTTCACCGATTGGCAGTTCCGTAACGCTTAG

mRNA sequence

ATGGATGAACAAACACTTATTGGAGTTCTAACTGCATTCACGTTGGCCCAACGTCAGATTTTACTAACGTTGGAGCTATTAATGAACAACAATAAGCGTCTCCCACATACACCGCCCGATACACGCCATAGAATTAGGGAGCTTGCTTACTTTCGCATGATACACGAGTCAGATCTTGTGTGTCGGCAAAGCACGCGGATGGATAGGCGAACATTCGCAATTCTATGCCATTTACTTAGAAATGTCGCTGGTCTTTCTTCAACTGAAATTGTCGATGTTGAGGAAATGGTAGCAATGTTCTTGCACGTCCTCGCTCATGACGTGAAGAACCGCGTCATACAACGAGAATTTGTACGCTCCGGTGAGACAGTATCTCGACATTTCAACATCGTATTGTTGGCTGTTCTTCGACTGTACGAGGAGTTGATAAAAAGACCTGTTCCGGTAACAAGTAACTGCAATGATCAACGTTGGAAGTGTTTCGAGAGCTGCCTTGGCGCGTTAGACGGGACGTACATAAAGGTGAACGTCCCCGCAGGAGATCGACCTACTTTCAGAACGCGTAAGGGGGAAATTGCCACAAACGTTCTTGGGGTCTGTGACACGAAAGGGGATTTCGTTTATGTCCTTGCCGGTTGGGAAGGATCTGCAGCAGACTCGCGGATCCTACGTGATGCGATTTCACGAGAAAATGGACTACAAGTGCCAAAGGGATATTATTATCTGTGCGATGCTGGATATCCAAACGCGGAGGGGTTTCTCGCCCCGTACAGAGGCCAGCGGTACCATTTGCAAGAGTGGCGTGGTGCTGCAAATGCGCCAACAAATGCAAAGGAGTACTTCAACATGAAGCACTCCTCGGCAAGGAATGTTATTGAGCGCGCGTTCGGTGTTCTAAAGGGTCGTTGGGCCATTCTTCGTGGAAAGTCGTATTATCCCCTGCAAGTCCAGTGTCGCACCATTCTAGCATGTGCGTTGCTTCACAATTTGATCAACAGGGAAATGACATATTGCGACGACGTTGAGGACGAGGACGAGGGGGACTCCACGTACGCAACGACCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCAGTGGCGCGACAACCTAGCCGCATCGATGTTCACCGATTGGCAGTTCCGTAACGCTTAG

Coding sequence (CDS)

ATGGATGAACAAACACTTATTGGAGTTCTAACTGCATTCACGTTGGCCCAACGTCAGATTTTACTAACGTTGGAGCTATTAATGAACAACAATAAGCGTCTCCCACATACACCGCCCGATACACGCCATAGAATTAGGGAGCTTGCTTACTTTCGCATGATACACGAGTCAGATCTTGTGTGTCGGCAAAGCACGCGGATGGATAGGCGAACATTCGCAATTCTATGCCATTTACTTAGAAATGTCGCTGGTCTTTCTTCAACTGAAATTGTCGATGTTGAGGAAATGGTAGCAATGTTCTTGCACGTCCTCGCTCATGACGTGAAGAACCGCGTCATACAACGAGAATTTGTACGCTCCGGTGAGACAGTATCTCGACATTTCAACATCGTATTGTTGGCTGTTCTTCGACTGTACGAGGAGTTGATAAAAAGACCTGTTCCGGTAACAAGTAACTGCAATGATCAACGTTGGAAGTGTTTCGAGAGCTGCCTTGGCGCGTTAGACGGGACGTACATAAAGGTGAACGTCCCCGCAGGAGATCGACCTACTTTCAGAACGCGTAAGGGGGAAATTGCCACAAACGTTCTTGGGGTCTGTGACACGAAAGGGGATTTCGTTTATGTCCTTGCCGGTTGGGAAGGATCTGCAGCAGACTCGCGGATCCTACGTGATGCGATTTCACGAGAAAATGGACTACAAGTGCCAAAGGGATATTATTATCTGTGCGATGCTGGATATCCAAACGCGGAGGGGTTTCTCGCCCCGTACAGAGGCCAGCGGTACCATTTGCAAGAGTGGCGTGGTGCTGCAAATGCGCCAACAAATGCAAAGGAGTACTTCAACATGAAGCACTCCTCGGCAAGGAATGTTATTGAGCGCGCGTTCGGTGTTCTAAAGGGTCGTTGGGCCATTCTTCGTGGAAAGTCGTATTATCCCCTGCAAGTCCAGTGTCGCACCATTCTAGCATGTGCGTTGCTTCACAATTTGATCAACAGGGAAATGACATATTGCGACGACGTTGAGGACGAGGACGAGGGGGACTCCACGTACGCAACGACCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCAGTGGCGCGACAACCTAGCCGCATCGATGTTCACCGATTGGCAGTTCCGTAACGCTTAG

Protein sequence

MDEQTLIGVLTAFTLAQRQILLTLELLMNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCNDQRWKCFESCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQEWRGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACALLHNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFRNA

Homology

[Close]

BLAST of MELO.jh102892.1 vs. NCBI nr
Match: KAA0031556.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0033743.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0036353.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0038064.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0038976.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 742 bits (1916), Expect = 4.53e-270
Identity = 361/362 (99.72%), Postives = 362/362 (100.00%), Query Frame = 0


Query: 28  MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS 87
           MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS
Sbjct: 1   MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS 60

Query: 88  TEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV 147
           TEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV
Sbjct: 61  TEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV 120

Query: 148 PVTSNCNDQRWKCFESCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFV 207
           PVTSNCNDQRWKCFE+CLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFV
Sbjct: 121 PVTSNCNDQRWKCFENCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFV 180

Query: 208 YVLAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQEW 267
           YVLAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQEW
Sbjct: 181 YVLAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQEW 240

Query: 268 RGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACALL 327
           RGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACALL
Sbjct: 241 RGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACALL 300

Query: 328 HNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFR 387
           HNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFR
Sbjct: 301 HNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFR 360

Query: 388 NA 389
           NA
Sbjct: 361 NA 362

[Close]

BLAST of MELO.jh102892.1 vs. NCBI nr
Match: KAA0056561.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 740 bits (1911), Expect = 2.62e-269
Identity = 360/362 (99.45%), Postives = 362/362 (100.00%), Query Frame = 0


Query: 28  MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS 87
           MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS
Sbjct: 1   MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS 60

Query: 88  TEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV 147
           TEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV
Sbjct: 61  TEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV 120

Query: 148 PVTSNCNDQRWKCFESCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFV 207
           PVTSNCNDQRWKCFE+CLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFV
Sbjct: 121 PVTSNCNDQRWKCFENCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFV 180

Query: 208 YVLAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQEW 267
           YVLAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQEW
Sbjct: 181 YVLAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQEW 240

Query: 268 RGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACALL 327
           RGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACALL
Sbjct: 241 RGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACALL 300

Query: 328 HNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFR 387
           HNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRD+LAASMFTDWQFR
Sbjct: 301 HNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAASMFTDWQFR 360

Query: 388 NA 389
           NA
Sbjct: 361 NA 362

[Close]

BLAST of MELO.jh102892.1 vs. NCBI nr
Match: KAA0032767.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 739 bits (1909), Expect = 6.39e-269
Identity = 361/366 (98.63%), Postives = 364/366 (99.45%), Query Frame = 0


Query: 24  LELLMNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVA 83
           LELLMNNNKRLPHTPPDTRHRIRELAYFRMIHESDLV RQSTRMDRRTFAILCHLLRNVA
Sbjct: 2   LELLMNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVSRQSTRMDRRTFAILCHLLRNVA 61

Query: 84  GLSSTEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELI 143
           GLSSTEIVDVEEMVAMFLHVLAHD+KNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELI
Sbjct: 62  GLSSTEIVDVEEMVAMFLHVLAHDMKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELI 121

Query: 144 KRPVPVTSNCNDQRWKCFESCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTK 203
           KRPVPVTSNCNDQRWKCFE+CLGALDGTYIKVNVPAGDRPTFRTRKG+IATNVLGVCDTK
Sbjct: 122 KRPVPVTSNCNDQRWKCFENCLGALDGTYIKVNVPAGDRPTFRTRKGKIATNVLGVCDTK 181

Query: 204 GDFVYVLAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYH 263
           GDFVYVLAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYH
Sbjct: 182 GDFVYVLAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYH 241

Query: 264 LQEWRGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILA 323
           LQEWRGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAIL GKSYYPLQVQCRTILA
Sbjct: 242 LQEWRGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAILSGKSYYPLQVQCRTILA 301

Query: 324 CALLHNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTD 383
           CALLHNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTD
Sbjct: 302 CALLHNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTD 361

Query: 384 WQFRNA 389
           WQFRNA
Sbjct: 362 WQFRNA 367

[Close]

BLAST of MELO.jh102892.1 vs. NCBI nr
Match: KAA0044609.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 739 bits (1908), Expect = 7.51e-269
Identity = 359/362 (99.17%), Postives = 360/362 (99.45%), Query Frame = 0


Query: 28  MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS 87
           MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTF ILCHLLRNVAGLSS
Sbjct: 1   MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFVILCHLLRNVAGLSS 60

Query: 88  TEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV 147
           TEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLL VLRLYEELIKRPV
Sbjct: 61  TEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLTVLRLYEELIKRPV 120

Query: 148 PVTSNCNDQRWKCFESCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFV 207
           PVTSNCNDQRWKCFE+CLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFV
Sbjct: 121 PVTSNCNDQRWKCFENCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFV 180

Query: 208 YVLAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQEW 267
           YVLAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQEW
Sbjct: 181 YVLAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQEW 240

Query: 268 RGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACALL 327
           RGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACALL
Sbjct: 241 RGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACALL 300

Query: 328 HNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFR 387
           HNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFR
Sbjct: 301 HNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFR 360

Query: 388 NA 389
           NA
Sbjct: 361 NA 362

[Close]

BLAST of MELO.jh102892.1 vs. NCBI nr
Match: TYK28297.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 738 bits (1906), Expect = 1.51e-268
Identity = 358/362 (98.90%), Postives = 361/362 (99.72%), Query Frame = 0


Query: 28  MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS 87
           MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS
Sbjct: 1   MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS 60

Query: 88  TEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV 147
           TEIVDVEEMVAMFLHV+AHD+KN VIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV
Sbjct: 61  TEIVDVEEMVAMFLHVIAHDMKNHVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV 120

Query: 148 PVTSNCNDQRWKCFESCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFV 207
           PVTSNCNDQRWKCFE+CLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFV
Sbjct: 121 PVTSNCNDQRWKCFENCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFV 180

Query: 208 YVLAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQEW 267
           YVLAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQEW
Sbjct: 181 YVLAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQEW 240

Query: 268 RGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACALL 327
           RGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACALL
Sbjct: 241 RGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACALL 300

Query: 328 HNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFR 387
           HNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFR
Sbjct: 301 HNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFR 360

Query: 388 NA 389
           NA
Sbjct: 361 NA 362

[Close]

BLAST of MELO.jh102892.1 vs. ExPASy TrEMBL
Match: A0A5D3D7X8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001080 PE=3 SV=1)

HSP 1 Score: 742 bits (1916), Expect = 2.19e-270
Identity = 361/362 (99.72%), Postives = 362/362 (100.00%), Query Frame = 0


Query: 28  MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS 87
           MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS
Sbjct: 1   MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS 60

Query: 88  TEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV 147
           TEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV
Sbjct: 61  TEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV 120

Query: 148 PVTSNCNDQRWKCFESCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFV 207
           PVTSNCNDQRWKCFE+CLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFV
Sbjct: 121 PVTSNCNDQRWKCFENCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFV 180

Query: 208 YVLAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQEW 267
           YVLAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQEW
Sbjct: 181 YVLAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQEW 240

Query: 268 RGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACALL 327
           RGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACALL
Sbjct: 241 RGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACALL 300

Query: 328 HNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFR 387
           HNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFR
Sbjct: 301 HNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFR 360

Query: 388 NA 389
           NA
Sbjct: 361 NA 362

[Close]

BLAST of MELO.jh102892.1 vs. ExPASy TrEMBL
Match: A0A5A7UST8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G00660 PE=3 SV=1)

HSP 1 Score: 740 bits (1911), Expect = 1.27e-269
Identity = 360/362 (99.45%), Postives = 362/362 (100.00%), Query Frame = 0


Query: 28  MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS 87
           MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS
Sbjct: 1   MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS 60

Query: 88  TEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV 147
           TEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV
Sbjct: 61  TEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV 120

Query: 148 PVTSNCNDQRWKCFESCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFV 207
           PVTSNCNDQRWKCFE+CLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFV
Sbjct: 121 PVTSNCNDQRWKCFENCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFV 180

Query: 208 YVLAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQEW 267
           YVLAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQEW
Sbjct: 181 YVLAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQEW 240

Query: 268 RGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACALL 327
           RGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACALL
Sbjct: 241 RGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACALL 300

Query: 328 HNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFR 387
           HNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRD+LAASMFTDWQFR
Sbjct: 301 HNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAASMFTDWQFR 360

Query: 388 NA 389
           NA
Sbjct: 361 NA 362

[Close]

BLAST of MELO.jh102892.1 vs. ExPASy TrEMBL
Match: A0A5A7STY2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold708G00110 PE=3 SV=1)

HSP 1 Score: 739 bits (1909), Expect = 3.09e-269
Identity = 361/366 (98.63%), Postives = 364/366 (99.45%), Query Frame = 0


Query: 24  LELLMNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVA 83
           LELLMNNNKRLPHTPPDTRHRIRELAYFRMIHESDLV RQSTRMDRRTFAILCHLLRNVA
Sbjct: 2   LELLMNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVSRQSTRMDRRTFAILCHLLRNVA 61

Query: 84  GLSSTEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELI 143
           GLSSTEIVDVEEMVAMFLHVLAHD+KNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELI
Sbjct: 62  GLSSTEIVDVEEMVAMFLHVLAHDMKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELI 121

Query: 144 KRPVPVTSNCNDQRWKCFESCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTK 203
           KRPVPVTSNCNDQRWKCFE+CLGALDGTYIKVNVPAGDRPTFRTRKG+IATNVLGVCDTK
Sbjct: 122 KRPVPVTSNCNDQRWKCFENCLGALDGTYIKVNVPAGDRPTFRTRKGKIATNVLGVCDTK 181

Query: 204 GDFVYVLAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYH 263
           GDFVYVLAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYH
Sbjct: 182 GDFVYVLAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYH 241

Query: 264 LQEWRGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILA 323
           LQEWRGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAIL GKSYYPLQVQCRTILA
Sbjct: 242 LQEWRGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAILSGKSYYPLQVQCRTILA 301

Query: 324 CALLHNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTD 383
           CALLHNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTD
Sbjct: 302 CALLHNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTD 361

Query: 384 WQFRNA 389
           WQFRNA
Sbjct: 362 WQFRNA 367

[Close]

BLAST of MELO.jh102892.1 vs. ExPASy TrEMBL
Match: A0A5A7TTQ6 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G003600 PE=3 SV=1)

HSP 1 Score: 739 bits (1908), Expect = 3.64e-269
Identity = 359/362 (99.17%), Postives = 360/362 (99.45%), Query Frame = 0


Query: 28  MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS 87
           MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTF ILCHLLRNVAGLSS
Sbjct: 1   MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFVILCHLLRNVAGLSS 60

Query: 88  TEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV 147
           TEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLL VLRLYEELIKRPV
Sbjct: 61  TEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLTVLRLYEELIKRPV 120

Query: 148 PVTSNCNDQRWKCFESCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFV 207
           PVTSNCNDQRWKCFE+CLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFV
Sbjct: 121 PVTSNCNDQRWKCFENCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFV 180

Query: 208 YVLAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQEW 267
           YVLAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQEW
Sbjct: 181 YVLAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQEW 240

Query: 268 RGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACALL 327
           RGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACALL
Sbjct: 241 RGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACALL 300

Query: 328 HNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFR 387
           HNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFR
Sbjct: 301 HNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFR 360

Query: 388 NA 389
           NA
Sbjct: 361 NA 362

[Close]

BLAST of MELO.jh102892.1 vs. ExPASy TrEMBL
Match: A0A5D3DWU0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001160 PE=3 SV=1)

HSP 1 Score: 738 bits (1906), Expect = 7.33e-269
Identity = 358/362 (98.90%), Postives = 361/362 (99.72%), Query Frame = 0


Query: 28  MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS 87
           MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS
Sbjct: 1   MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS 60

Query: 88  TEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV 147
           TEIVDVEEMVAMFLHV+AHD+KN VIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV
Sbjct: 61  TEIVDVEEMVAMFLHVIAHDMKNHVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV 120

Query: 148 PVTSNCNDQRWKCFESCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFV 207
           PVTSNCNDQRWKCFE+CLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFV
Sbjct: 121 PVTSNCNDQRWKCFENCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFV 180

Query: 208 YVLAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQEW 267
           YVLAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQEW
Sbjct: 181 YVLAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQEW 240

Query: 268 RGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACALL 327
           RGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACALL
Sbjct: 241 RGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACALL 300

Query: 328 HNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFR 387
           HNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFR
Sbjct: 301 HNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFR 360

Query: 388 NA 389
           NA
Sbjct: 361 NA 362

[Close]

BLAST of MELO.jh102892.1 vs. TAIR 10
Match: AT5G41980.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 199.5 bits (506), Expect = 4.9e-51
Identity = 106/284 (37.32%), Postives = 157/284 (55.28%), Query Frame = 0


Query: 51  FRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKN 110
           +++++  +  C ++ RMD+  F  LC LL+    L  T  + +E  +A+FL ++ H+++ 
Sbjct: 32  YQILNGPNEQCFENFRMDKPVFYKLCDLLQTRGLLRHTNRIKIEAQLAIFLFIIGHNLRT 91

Query: 111 RVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCNDQRWKCFESCLGALDG 170
           R +Q  F  SGET+SRHFN VL AV+ + ++  +      +  ND  +  F+ C+G +D 
Sbjct: 92  RAVQELFCYSGETISRHFNNVLNAVIAISKDFFQPNSNSDTLENDDPY--FKDCVGVVDS 151

Query: 171 TYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDAISRE 230
            +I V V   ++  FR   G +  NVL        F YVLAGWEGSA+D ++L  A++R 
Sbjct: 152 FHIPVMVGVDEQGPFRNGNGLLTQNVLAASSFDLRFNYVLAGWEGSASDQQVLNAALTRR 211

Query: 231 NGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQEWRGAANAPTNAKEYFNMKHSSARN 290
           N LQVP+G YY+ D  YPN  GF+APY G          + N+   AKE FN +H     
Sbjct: 212 NKLQVPQGKYYIVDNKYPNLPGFIAPYHGV---------STNSREEAKEMFNERHKLLHR 271

Query: 291 VIERAFGVLKGRWAILRGKSYYPLQVQCRTILACALLHNLINRE 335
            I R FG LK R+ IL     YPLQ Q + ++A   LHN +  E
Sbjct: 272 AIHRTFGALKERFPILLSAPPYPLQTQVKLVIAACALHNYVRLE 304

[Close]

BLAST of MELO.jh102892.1 vs. TAIR 10
Match: AT1G43722.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 148.3 bits (373), Expect = 1.3e-35
Identity = 88/265 (33.21%), Postives = 131/265 (49.43%), Query Frame = 0


Query: 51  FRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKN 110
           +R + +    C Q  RM    F  LC++L+    L  T  + +EE VAMFL +  H+   
Sbjct: 56  WRRLQQDAAACLQLLRMSLPCFTTLCNMLQTNYDLQPTLNISIEESVAMFLRICGHNEVY 115

Query: 111 RVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRP-------VPVTSNCNDQRWKCFES 170
           R +   F R+ ETV R F  VL A   L  + I+ P       +P     + + W  F  
Sbjct: 116 RDVGLRFGRNQETVQRKFREVLTATELLACDYIRTPTRQELYRIPERLQVDQRYWPYFSG 175

Query: 171 CLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFVYVLAGWEGSAADSRIL 230
            +GA+DGT++ V V    +  +  R    + N++ +CD K  F Y+  G  GS  D+ +L
Sbjct: 176 FVGAMDGTHVCVKVKPDLQGMYWNRHDNASLNIMAICDLKMLFTYIWNGAPGSCYDTAVL 235

Query: 231 RDAISRENGLQVPKG-YYYLCDAGYPNAEGFLAPYRGQ-----RYHLQEWRGAANAPTNA 290
           + A   ++   +P    YYL D+GYPN +G LAPYR       RYH+ ++      P N 
Sbjct: 236 QIAQQSDSEFPLPPSEKYYLVDSGYPNKQGLLAPYRSSRNRVVRYHMSQFYYGPR-PRNK 295

Query: 291 KEYFNMKHSSARNVIERAFGVLKGR 303
            E FN  H+S R+VIER F + K +
Sbjct: 296 HELFNQCHTSLRSVIERTFRIWKNK 319

[Close]

BLAST of MELO.jh102892.1 vs. TAIR 10
Match: AT5G35695.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 127.1 bits (318), Expect = 3.1e-29
Identity = 75/193 (38.86%), Postives = 105/193 (54.40%), Query Frame = 0


Query: 206 FVYVLAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQ 265
           F+YVL+GWEGSA DSR+L DA+ +          +YL D G+ N   FLAP+RG RYHLQ
Sbjct: 25  FIYVLSGWEGSAHDSRVLSDALRK----------FYLVDCGFANRLNFLAPFRGVRYHLQ 84

Query: 266 EWRGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACA 325
           E+ G    P    E FN++H S RNVIER FG+ K R+AI +    +  + Q   +L CA
Sbjct: 85  EFAGQRRDPETPHELFNLRHVSLRNVIERIFGIFKSRFAIFKSAPPFSYKKQAGLVLTCA 144

Query: 326 LLHNLINR-----EMTYCDDVEDE-----DEGDSTYATTTASED-----IQYIETTNEWS 384
            LHN + +     E  + D+V +E     +EG++       +E+      Q  E TN   
Sbjct: 145 ALHNFLRKECRSDEADFPDEVGNEGDVVNNEGNAMNTNEIDNEEPLEAQKQDRENTN--- 204

[Close]

BLAST of MELO.jh102892.1 vs. TAIR 10
Match: AT5G28730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 496 Blast hits to 496 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 23; Plants - 470; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 98.2 bits (243), Expect = 1.5e-20
Identity = 76/239 (31.80%), Postives = 106/239 (44.35%), Query Frame = 0


Query: 54  IHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRVI 113
           I+ +++ C+   RM    F  LC +L    GL S+  + ++E VA+FL + A +   R I
Sbjct: 17  IYSNEVSCQTLIRMSSEAFTQLCEILHGKYGLQSSTNISLDESVAIFLIICASNDTQRDI 76

Query: 114 QREFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCNDQRWKCFESCLGALDGTYI 173
              F  + ET+ R F+ VL A+ RL  E I RP  V               L A+     
Sbjct: 77  ALRFGHAQETIWRKFHDVLKAMERLAVEYI-RPRKVEE-------------LRAISN--- 136

Query: 174 KVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDAISRENGL 233
           ++       P      G  + NVL +CD    F Y   G  GS  D+R+L  AIS +   
Sbjct: 137 RLQDDTRYWPFLMDLLGIASFNVLAICDLDMLFTYCFVGMAGSTHDARVLSAAISDDPLF 196

Query: 234 QV-PKGYYYLCDAGYPNAEGFLAPYRGQRYHLQEWRGAANAPTNAKEYFNMKHSSARNV 292
            V P   YYL D+GY N  G+LAPYR +    Q+         N  E  N+K     NV
Sbjct: 197 HVPPDSKYYLVDSGYANKRGYLAPYRREHREAQDIISNNFLTVNLFETHNIKDYDFDNV 238

[Close]

BLAST of MELO.jh102892.1 vs. TAIR 10
Match: AT5G28950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 448 Blast hits to 446 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 21; Plants - 396; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 86.3 bits (212), Expect = 6.0e-17
Identity = 44/112 (39.29%), Postives = 66/112 (58.93%), Query Frame = 0


Query: 161 FESCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFVYVLAGWEGSAADS 220
           F+ C+GA+D T+I   V     P+FR RKG+I+ N+L  C+   +F+YVL+GWEGSA DS
Sbjct: 22  FKDCVGAIDDTHIFAMVSQKKMPSFRNRKGDISQNMLAACNFDVEFMYVLSGWEGSAHDS 81

Query: 221 RILRDAISR-ENGLQVP---KGYYYLCDAGYPNAEGFLAPYRGQRYHLQEWR 269
           ++L DA++R  N L VP   +    + +    N +  L     QR +  +WR
Sbjct: 82  KVLNDALTRNSNRLPVPEEDESAEEVVEEVNDNNDEVLTTQDQQREYANQWR 133

The following BLAST results are available for this feature:

BLAST of MELO.jh102892.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0031556.1	4.53e-270	99.72	retrotransposon protein [Cucumis melo var. makuwa] >KAA0033743.1 retrotransposon...	[more]
KAA0056561.1	2.62e-269	99.45	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0032767.1	6.39e-269	98.63	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0044609.1	7.51e-269	99.17	retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK28297.1	1.51e-268	98.90	retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of MELO.jh102892.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO.jh102892.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D7X8	2.19e-270	99.72	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7UST8	1.27e-269	99.45	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7STY2	3.09e-269	98.63	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7TTQ6	3.64e-269	99.17	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3DWU0	7.33e-269	98.90	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of MELO.jh102892.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G41980.1	4.9e-51	37.32	CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int...	[more]
AT1G43722.1	1.3e-35	33.21	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G35695.1	3.1e-29	38.86	CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int...	[more]
AT5G28730.1	1.5e-20	31.80	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G28950.1	6.0e-17	39.29	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027806	Harbinger transposase-derived nuclease domain	PFAM	PF13359	DDE_Tnp_4	coord: 168..329 e-value: 2.3E-26 score: 92.4
None	No IPR available	PANTHER	PTHR22930	UNCHARACTERIZED	coord: 29..385
None	No IPR available	PANTHER	PTHR22930:SF211	NUCLEASE HARBI1-RELATED	coord: 29..385

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO.jh102892.1.t1	MELO.jh102892.1.t1	mRNA