MELO.jh102882.1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh102882.1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Reverse transcriptase
Location	chr12: 14524706 .. 14529356 (+)
RNA-Seq Expression	MELO.jh102882.1
Synteny	MELO.jh102882.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGCGGAAGCAGGAGAACCCCTATGGCTCGCCACGGTCACTTCACGTCGCTCGCCGCAAGCCGCCATCGTAGAAGCCGCGTCGTCCGCGTCCGCCAGAAGGAGCCGCGCGATCCGAGGCGAGTCGGGAAACCCGTCGCGTCCGGCCGAATCCACCTGCGCCGAACGCGTCGCGGCCGAGATCCATCTCCACGTCGGCCGCGTCGCCGACCATCGTCGTCGCATCCGAGCCGCGAACGCGTCTGCAATCCGGCCGCGCGCGCCTACGCCGAGCCGTATCAGCCGCGCGCGCCCGCCGCCTCAGCCGACGAACGAACCCGAACCGGAACCGCCGCTCGAACCAGAGCCGCGCGCTCGAACCGGAGCCGCGCGCCGAACCGGAGCCGAACCCGCGCCGTGCCACGCGTGCGACTCTCCCGCGTGCGCGCGCGCCGTGTGTTCCGCGTAGCCGCCGCGTCCCCACCCCGTGCAAGCCGAGCCGCACGCGAAGTCCCCATACCGAGCCGAGCCGCGTCCGCACCAAGCCGAGCGGTCTGCCTTCTTCCAGTGAGCGCCAAGCCTTTTGGCTCCTTCCACCTAAATTTTGGTAATTTCCAAATTCCCTAGCCTTGATAATTAAATGAGTTAATTTGGAAATTTAATTAATTTAATTACTTTCCTCAAGAAGCAAATTGGACAAATAGGCTGCTGACTTAGGACTTCCTCGGTAGGAACTCATCTAGCAACATCTCGAGGTAAGAGATTCCTACTACTAGCCCCATGTGAGAATTTGATGTTGCATGTTCCTTCGGTGACATACGATGATGGTTGGGCTTACGATGTATGATAATATTTTATCATGATCGACGAATGACATGGCCATACTTTGGCATAATATTATAGTAATGAGAACCCTCGAACCATATGTGGTGTATGAAAAGACCGATGGACTTATGATGTATGTGATGTATGATAAGGCTGATGGACTTATGATGTATGTGGTGTATGATAAGACTGATGGACTTATGACGTAGGTGGCGTATAACGAGGACTATTAGTTTGTTTGATGATAGTTGTAGTGGGGGATGAGATGGTGGTTATTTTCGATGATAATTTGATGACGTATGCATGTGTATGTTGGGATTGGGGTATCTGTTAACTTCTCCTATCGAGTCGTACTGCATGGGTGTCCTTCGGGATCACCACCTATTTAGGGCTGTTAGGCTCGACGGGCGCCGGTCAGCATGACTATAGATATGACTCGAGCGACTCGACGGGGTCCTCGCATCCCGACGGTCCTAAGTGTCCCCTGGACACCGAAGACCGAGTTATGTCCCTACGGGCGCATGTTGCACGTGTTCGGGAGCGTGCCGAGATGGGTACTAGTTTCGGGACTCGATAGGAATGTTAACGGCACCTAGTGGGACTAGTAGTGGGTCCCTGCGAGTATTTTTATACTCATTCTCTTCATTTTATGTTTTCGGGTAGAGGACGAGGTAAGGGCAAGGCGCGAGCGACGTGAAGTGACCGTGGCGAGCCATAGGGGTTCTCCCCTTCGCACATGTTTTACTTTACGGTTAAATTCATGTTTCGGCGCCTATTTACTTTGGTTATTTTTGTAGATAGGGCCCGCTTAGGGATTTTAAACTTAACTCGTATTTCCACATGTTACTTTAACTATCTTTCATAAATAAATTTGCTAGATTTCCTTGCATCTATTTACACCAGATTTTATGACTTAAACACTGATCCTAGATTTAGTAACCACTTCGATTCAGCATAAAGAGTCGGGTCGTTACAGTTGGTATCAGAGCGCAGTGTTTTAGGTCCTGTAGACTGACTTATGATGTAAGTCATTTTGTTTTGATTTTTACCTCACCCTATGGCTATACGGTCCTTCGTCACTCGCCAGGTATGCCTAAAGCTTTACAAATATTAAGATTATAATGTTGCCTGATTAGATTAGACTTAGAGAGAGAATCGTGAGCTCTAGTGGTGAAAAAAATTTGTTGGTGAATTTTAGGAAGAATGCCGCCACGTAGAGGTGCACGCCGAGGAGGTGGCAGGGGAGGCAGAGGAGCGGTCGTGGCCCGGCGGAGGAGCTGCCGCGCCGCCGGTCAACCCGACGTACAGTCAACCCTAATGCACGGTCACTCGGGCGGATCTCGCCGCAATGGGCAGCGTTACCACCAGCCAGCTGCTAGCTGCGCCGTTCCTTGCTTCAGCGAACCAGGCCGCCTGGGACCAGCCTGTAGTCCCTCCAGCCCTGTTCAGACCGCCTGTAGTCCCTCCGGCCCTGTTCGGGACCGGCCGTCATCCCTCCGGCCCGGTGGAAGCTCGGCGTACACTGTCGGTGAGGCCAAGCACTTGAGGATTTTAGGAAGTACAACCCGAAGACTTTCGACGGATCCTTGGACAACCCCTTTAGAGCCCAGCTGTGGTTGACATCCATAGAGACGATCTTCAGGTACATGAAGTGCCCAGAAGACCAGAAGGTGCAGTGTGCAGCTTTCTGTTTGGAGGATAGGGGGACTGCCTGGTGGGAGGCTGCGAGAGGCGGGAGGAGATGCCAAGATCACATGGGAGCAGTTCAGGAGAACTTCTATGCTAAGTTTTCTCCGCCAATGTGAAGCACGCCAAGCTGCAAGAGTTCCTAAACTTGGAGCAAGGCGACATGACGGTGGAGCAGTACGACGCCGAGTTCGATATGCTGTCCCGCTTTGCTCCCGATATGGTAAGAGACGAGGCCGCCGGGATCGAGAGATTTGTTAATGGCCTCGGGTTAGACCTCCGGGGTTTTGTACGAGCTCTTCGACCAACCACTCATGCGGATGCTCTACGCATGCTGGATCGAGCCCATGAGAGGCGGTCAATCTAAGGTTGTCGGCACAGGTCGGCCTCGGGACGAAGAGGAAGGCGGAGGCGCGGCCGACGTAGTACCACAGACTCAGAGGTCGGGAGGTGTCTTCAGAGACACCGTCGGGGCGCTGGGAGAACTTTGAGAGAGCTACCCACTTGTACTACTGTGGGAAGGTCCATGGAGGACAATGTTTAGGCTGGGAGTGGGTCGCCGGTGCGGGCGGCGGGCACACTGCGTGCGTGTCCTCGGAAACCCTTAGAGACGACGCCACGTCGGCCTTACGCTCCCGGGGAGAGTCTTTGCCACGACCGGCGGGCGGCCGAGCGAGCTAGTACGGTGGTGACAGGTACGCTCCCAATCTTGGGGCATCATGCTTTGGTACTATTTGACTCGGGGTCATCGCATTCATTTATATCCTCTATTTTTGTCAAGCATGCGGGTTTAGAAGTAGAACCGTTGGGTAGTGCCTTGTCTGTCTCTACTCCTTCTGGAGAGGTCCTTTTGTCTAAGGAAAAAATAAGGGCATGTTGGGTAGAAATAGCAAACCATACCTTGAATGTAACTTTACTGGTGCTAGATATGCAAGATTTCGATGTAATTTTAGGCATGGATTGGTTGTCAACTAACCATGCAACCATAGACTGTTTTAATAAGGAAGTAGTCTTTAACCCTCCTTCCGGGGATAAGTTTAAGTTTAGAGGAGCAGGCATGGTAGGTCTTCCCAAGGTCATCTCAGCAATGAAGGCGAGTAAGCTACTTAGCCAGGGTACTTGGGGTATCTTGGCGAACGTAGTAGATATGGCAGAACCAGAAGTTTCCCTATCTTCCGAACCAGTAGTAAGGGAGTACCCTGACGTTTTCCCCGACGAACTCCCAGGACTTCCGCCTCCCAGGGAGGTAGACTTCGCCATTGAGTTAGAGCCCGGCACCGCCCCTATCTCTAGAGCTCCTTACAGAATGGCCCCAGCCGAGTTAAAGGAGTTGAAAGTCCAGTTACAGGAGCTGTTGGACAAGGGCTTTATCCGGCCCAGTGTATCACCTTGGGGAGCCCCAGTGTTGTTCGTGAAGAAGAAGGATGGGTCGATGCGCCTTTGCATTGACTACCGAGAATTGAACAAGGTGACAGTTAAGAACCGCTACCCCTTACCCAGAATCGAGGACCTGTTCGACCAGTTACAGGGGGCCACCGTCTTTTCCAAGATCGACCTGCGATCAGGCTATCACCAGTTGAGGATTAGGGACGGTGATATTCCCAAGACGGCCTTTCGTTCGAGGTACGGACACTACGAATTCATAGTGATGTCCTTTGGTTTAACTAATGCCCCTGCAGTGTTCATGGATTTGATGAACAGGGTGTTTAAGGACTTTCTAGACCAATTCGTCATAGTCTTCATTGACGATATCTTGATCTATTCCAAGACTGAGGCCGAACACGAAGAGCACTTGCACCAAGTCTTGGAGACCCTTCGAGCTCATAAGCTATACGCCAAGTTCTCCAAGTGTGAGTTCTGGTTAAAGAAGGTGACATTTTTAGGGCACGTGGTTTCCAGTGAGGGAGTCTCGGTGGACCCAGCTAAGGTCGAAGCGGTGACCAACGGCCTCGGCCGTACGGTCGGTGAGATTCGCGGTTTTGGGTCGGCAGGATACTACGGGAGGTTTGTAGAAGACTTCTCACGCGCCAGCCCATTGATGATTGACCGGGAAGGGAACCCTTTTTGCAGAGCCCGGCATGTGAGAGTAGTTTCCAAGAGCTTAAGCGAAGCTAGTGACGGCACCGTCCGACAGTGCACGATGGGTCGGGAAGTTTTGTGA

mRNA sequence

ATGTGCGGAAGCAGGAGAACCCCTATGGCTCGCCACGGTCACTTCACGTCGCTCGCCGCAAGCCGCCATCGTAGAAGCCGCGTCGTCCGCGTCCGCCAGAAGGAGCCGCGCGATCCGAGGCGAGTCGGGAAACCCGTCGCGTCCGGCCGAATCCACCTGCGCCGAACGCGTCGCGGCCGAGATCCATCTCCACGTCGGCCGCGTCGCCGACCATCGTCGTCGCATCCGAGCCGCGAACGCGTCTGCAATCCGGCCGCGCGCGCCTACGCCGAGCCGTATCAGCCGCGCGCGCCCGCCGCCTCAGCCGACGAACGAACCCGAACCGGAACCGCCGCTCGAACCAGAGCCGCGCGCTCGAACCGGAGCCGCGCGCCGAACCGGAGCCGAACCCGCGCCGTGCCACGCGTGCGACTCTCCCGCGTGCGCGCGCGCCGTGTGTTCCGCGTAGCCGCCGCGTCCCCACCCCGTGCAAGCCGAGCCGCACGCGAAGTCCCCATACCGAGCCGAGCCGCGTCCGCACCAAGCCGAGCGGTCTGCCTTCTTCCAGTGAGCGCCAAGCCTTTTGGCTCCTTCCACCTAAATTTTGGAAGAATGCCGCCACGTAGAGGTGCACGCCGAGGAGGTGGCAGGGGAGGCAGAGGAGCGGTCGTGGCCCGGCGGAGGAGCTGCCGCGCCGCCGGTCAACCCGACGTACAGTCAACCCTAATGCACGGTCACTCGGGCGGATCTCGCCGCAATGGGCAGCGTTACCACCAGCCAGCTGCTAGCTGCGCCGTTCCTTGCTTCAGCGAACCAGGCCGCCTGGGACCAGCCTGTAGTCCCTCCAGCCCTGTTCAGACCGCCTGTAGTCCCTCCGGCCCTGTTCGGGACCGGCCGTCATCCCTCCGGCCCGGTGGAAGCTCGGCGTACACTGTCGGTGAGGCCAAGCACTTGAGGATTTTAGGAAGTACAACCCGAAGACTTTCGACGGATCCTTGGACAACCCCTTTAGAGCCCAGCTTTTTCTCCGCCAATGTGAAGCACGCCAAGCTGCAAGAGTTCCTAAACTTGGAGCAAGGCGACATGACGGTGGAGCAGTACGACGCCGAGTTCGATATGCTGTCCCGCTTTGCTCCCGATATGGTAAGAGACGAGGCCGCCGGGATCGAGAGATTTGTTAATGGCCTCGGGTTAGACCTCCGGGGTTTTGCTGGGAGTGGGTCGCCGGTGCGGGCGGCGGGCACACTGCGTGCGTGTCCTCGGAAACCCTTAGAGACGACGCCACGTCGGCCTTACGCTCCCGGGGAGAGTCTTTGCCACGACCGGCGGGCGGCCGAGCGAGCTAGTACGGTGGTGACAGGTACGCTCCCAATCTTGGGGCATCATGCTTTGGTACTATTTGACTCGGGGTCATCGCATTCATTTATATCCTCTATTTTTGTCAAGCATGCGGGTTTAGAAGTAGAACCGTTGGGTAGTGCCTTGTCTGTCTCTACTCCTTCTGGAGAGGTCCTTTTGTCTAAGGAAAAAATAAGGGCATGTTGGGTAGAAATAGCAAACCATACCTTGAATGTAACTTTACTGGTGCTAGATATGCAAGATTTCGATGTAATTTTAGGCATGGATTGGTTGTCAACTAACCATGCAACCATAGACTGTTTTAATAAGGAAGTAGTCTTTAACCCTCCTTCCGGGGATAAGTTTAAGTTTAGAGGAGCAGGCATGGTAGGTCTTCCCAAGGTCATCTCAGCAATGAAGGCGAGTAAGCTACTTAGCCAGGGTACTTGGGGTATCTTGGCGAACGTAGTAGATATGGCAGAACCAGAAGTTTCCCTATCTTCCGAACCAGTAGTAAGGGAGTACCCTGACGTTTTCCCCGACGAACTCCCAGGACTTCCGCCTCCCAGGGAGGTAGACTTCGCCATTGAGTTAGAGCCCGGCACCGCCCCTATCTCTAGAGCTCCTTACAGAATGGCCCCAGCCGAGTTAAAGGAGTTGAAAGTCCAGTTACAGGAGCTGTTGGACAAGGGCTTTATCCGGCCCAGTGTATCACCTTGGGGAGCCCCAGTGTTGTTCGTGAAGAAGAAGGATGGGTCGATGCGCCTTTGCATTGACTACCGAGAATTGAACAAGGTGACAGTTAAGAACCGCTACCCCTTACCCAGAATCGAGGACCTGTTCGACCAGTTACAGGGGGCCACCGTCTTTTCCAAGATCGACCTGCGATCAGGCTATCACCAGTTGAGGATTAGGGACGGTGATATTCCCAAGACGGCCTTTCGTTCGAGGTACGGACACTACGAATTCATAGTGATGTCCTTTGGTTTAACTAATGCCCCTGCAGTGTTCATGGATTTGATGAACAGGGTGTTTAAGGACTTTCTAGACCAATTCGTCATAGTCTTCATTGACGATATCTTGATCTATTCCAAGACTGAGGCCGAACACGAAGAGCACTTGCACCAAGTCTTGGAGACCCTTCGAGCTCATAAGCTATACGCCAAGTTCTCCAAGTGTGAGTTCTGGTTAAAGAAGGTGACATTTTTAGGGCACGTGGTTTCCAGTGAGGGAGTCTCGGTGGACCCAGCTAAGGTCGAAGCGGTGACCAACGGCCTCGGCCGTACGGTCGGTGAGATTCGCGGTTTTGGGTCGGCAGGATACTACGGGAGGTTTGTAGAAGACTTCTCACGCGCCAGCCCATTGATGATTGACCGGGAAGGGAACCCTTTTTGCAGAGCCCGGCATGTGAGAGTAGTTTCCAAGAGCTTAAGCGAAGCTAGTGACGGCACCGTCCGACAGTGCACGATGGGTCGGGAAGTTTTGTGA

Coding sequence (CDS)

ATGTGCGGAAGCAGGAGAACCCCTATGGCTCGCCACGGTCACTTCACGTCGCTCGCCGCAAGCCGCCATCGTAGAAGCCGCGTCGTCCGCGTCCGCCAGAAGGAGCCGCGCGATCCGAGGCGAGTCGGGAAACCCGTCGCGTCCGGCCGAATCCACCTGCGCCGAACGCGTCGCGGCCGAGATCCATCTCCACGTCGGCCGCGTCGCCGACCATCGTCGTCGCATCCGAGCCGCGAACGCGTCTGCAATCCGGCCGCGCGCGCCTACGCCGAGCCGTATCAGCCGCGCGCGCCCGCCGCCTCAGCCGACGAACGAACCCGAACCGGAACCGCCGCTCGAACCAGAGCCGCGCGCTCGAACCGGAGCCGCGCGCCGAACCGGAGCCGAACCCGCGCCGTGCCACGCGTGCGACTCTCCCGCGTGCGCGCGCGCCGTGTGTTCCGCGTAGCCGCCGCGTCCCCACCCCGTGCAAGCCGAGCCGCACGCGAAGTCCCCATACCGAGCCGAGCCGCGTCCGCACCAAGCCGAGCGGTCTGCCTTCTTCCAGTGAGCGCCAAGCCTTTTGGCTCCTTCCACCTAAATTTTGGAAGAATGCCGCCACGTAGAGGTGCACGCCGAGGAGGTGGCAGGGGAGGCAGAGGAGCGGTCGTGGCCCGGCGGAGGAGCTGCCGCGCCGCCGGTCAACCCGACGTACAGTCAACCCTAATGCACGGTCACTCGGGCGGATCTCGCCGCAATGGGCAGCGTTACCACCAGCCAGCTGCTAGCTGCGCCGTTCCTTGCTTCAGCGAACCAGGCCGCCTGGGACCAGCCTGTAGTCCCTCCAGCCCTGTTCAGACCGCCTGTAGTCCCTCCGGCCCTGTTCGGGACCGGCCGTCATCCCTCCGGCCCGGTGGAAGCTCGGCGTACACTGTCGGTGAGGCCAAGCACTTGAGGATTTTAGGAAGTACAACCCGAAGACTTTCGACGGATCCTTGGACAACCCCTTTAGAGCCCAGCTTTTTCTCCGCCAATGTGAAGCACGCCAAGCTGCAAGAGTTCCTAAACTTGGAGCAAGGCGACATGACGGTGGAGCAGTACGACGCCGAGTTCGATATGCTGTCCCGCTTTGCTCCCGATATGGTAAGAGACGAGGCCGCCGGGATCGAGAGATTTGTTAATGGCCTCGGGTTAGACCTCCGGGGTTTTGCTGGGAGTGGGTCGCCGGTGCGGGCGGCGGGCACACTGCGTGCGTGTCCTCGGAAACCCTTAGAGACGACGCCACGTCGGCCTTACGCTCCCGGGGAGAGTCTTTGCCACGACCGGCGGGCGGCCGAGCGAGCTAGTACGGTGGTGACAGGTACGCTCCCAATCTTGGGGCATCATGCTTTGGTACTATTTGACTCGGGGTCATCGCATTCATTTATATCCTCTATTTTTGTCAAGCATGCGGGTTTAGAAGTAGAACCGTTGGGTAGTGCCTTGTCTGTCTCTACTCCTTCTGGAGAGGTCCTTTTGTCTAAGGAAAAAATAAGGGCATGTTGGGTAGAAATAGCAAACCATACCTTGAATGTAACTTTACTGGTGCTAGATATGCAAGATTTCGATGTAATTTTAGGCATGGATTGGTTGTCAACTAACCATGCAACCATAGACTGTTTTAATAAGGAAGTAGTCTTTAACCCTCCTTCCGGGGATAAGTTTAAGTTTAGAGGAGCAGGCATGGTAGGTCTTCCCAAGGTCATCTCAGCAATGAAGGCGAGTAAGCTACTTAGCCAGGGTACTTGGGGTATCTTGGCGAACGTAGTAGATATGGCAGAACCAGAAGTTTCCCTATCTTCCGAACCAGTAGTAAGGGAGTACCCTGACGTTTTCCCCGACGAACTCCCAGGACTTCCGCCTCCCAGGGAGGTAGACTTCGCCATTGAGTTAGAGCCCGGCACCGCCCCTATCTCTAGAGCTCCTTACAGAATGGCCCCAGCCGAGTTAAAGGAGTTGAAAGTCCAGTTACAGGAGCTGTTGGACAAGGGCTTTATCCGGCCCAGTGTATCACCTTGGGGAGCCCCAGTGTTGTTCGTGAAGAAGAAGGATGGGTCGATGCGCCTTTGCATTGACTACCGAGAATTGAACAAGGTGACAGTTAAGAACCGCTACCCCTTACCCAGAATCGAGGACCTGTTCGACCAGTTACAGGGGGCCACCGTCTTTTCCAAGATCGACCTGCGATCAGGCTATCACCAGTTGAGGATTAGGGACGGTGATATTCCCAAGACGGCCTTTCGTTCGAGGTACGGACACTACGAATTCATAGTGATGTCCTTTGGTTTAACTAATGCCCCTGCAGTGTTCATGGATTTGATGAACAGGGTGTTTAAGGACTTTCTAGACCAATTCGTCATAGTCTTCATTGACGATATCTTGATCTATTCCAAGACTGAGGCCGAACACGAAGAGCACTTGCACCAAGTCTTGGAGACCCTTCGAGCTCATAAGCTATACGCCAAGTTCTCCAAGTGTGAGTTCTGGTTAAAGAAGGTGACATTTTTAGGGCACGTGGTTTCCAGTGAGGGAGTCTCGGTGGACCCAGCTAAGGTCGAAGCGGTGACCAACGGCCTCGGCCGTACGGTCGGTGAGATTCGCGGTTTTGGGTCGGCAGGATACTACGGGAGGTTTGTAGAAGACTTCTCACGCGCCAGCCCATTGATGATTGACCGGGAAGGGAACCCTTTTTGCAGAGCCCGGCATGTGAGAGTAGTTTCCAAGAGCTTAAGCGAAGCTAGTGACGGCACCGTCCGACAGTGCACGATGGGTCGGGAAGTTTTGTGA

Protein sequence

MCGSRRTPMARHGHFTSLAASRHRRSRVVRVRQKEPRDPRRVGKPVASGRIHLRRTRRGRDPSPRRPRRRPSSSHPSRERVCNPAARAYAEPYQPRAPAASADERTRTGTAARTRAARSNRSRAPNRSRTRAVPRVRLSRVRARRVFRVAAASPPRASRAAREVPIPSRAASAPSRAVCLLPVSAKPFGSFHLNFGRMPPRRGARRGGGRGGRGAVVARRRSCRAAGQPDVQSTLMHGHSGGSRRNGQRYHQPAASCAVPCFSEPGRLGPACSPSSPVQTACSPSGPVRDRPSSLRPGGSSAYTVGEAKHLRILGSTTRRLSTDPWTTPLEPSFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAAGIERFVNGLGLDLRGFAGSGSPVRAAGTLRACPRKPLETTPRRPYAPGESLCHDRRAAERASTVVTGTLPILGHHALVLFDSGSSHSFISSIFVKHAGLEVEPLGSALSVSTPSGEVLLSKEKIRACWVEIANHTLNVTLLVLDMQDFDVILGMDWLSTNHATIDCFNKEVVFNPPSGDKFKFRGAGMVGLPKVISAMKASKLLSQGTWGILANVVDMAEPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNGLGRTVGEIRGFGSAGYYGRFVEDFSRASPLMIDREGNPFCRARHVRVVSKSLSEASDGTVRQCTMGREVL

Homology

[Close]

BLAST of MELO.jh102882.1 vs. NCBI nr
Match: KAA0025917.1 (pol protein [Cucumis melo var. makuwa] >KAA0042949.1 pol protein [Cucumis melo var. makuwa] >KAA0048622.1 pol protein [Cucumis melo var. makuwa] >KAA0056306.1 pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 983 bits (2540), Expect = 0.0
Identity = 582/878 (66.29%), Postives = 608/878 (69.25%), Query Frame = 0


Query: 198 MPPRRGARRGGGRGGRGAVVARRRSCRAAG--QPDVQSTLMHGHSGGSRRNGQRYHQPAA 257
           MPPRRGARRGGGRGGRGA   +     AA    PDV        +       ++ +Q   
Sbjct: 1   MPPRRGARRGGGRGGRGAGRGQPAEQPAAPPVNPDVPVNPNAPVTQADLAAMEQRYQAML 60

Query: 258 SCAVPCFSEPGRLGPACSPSSPVQTA-CSPSGPVRDRPSSLRPGGSSAYTV-----GEAK 317
             A+  F     L    + ++PVQ     P  PV+D+P  + P    A  V      EAK
Sbjct: 61  QAALAPF-----LAAQQNQAAPVQDQPVVPPAPVQDQP-VIPPAPVEAQPVPVQLSAEAK 120

Query: 318 HLRIL---------GSTTRRLSTDPWTTPLEP---------------------------- 377
           HLR           GS         W T +E                             
Sbjct: 121 HLRDFRKYNPKTFDGSLDNPFRAQLWLTSIETIFRYMKCPEDQKVQCAAFCLEDRGTAWW 180

Query: 378 -------------------------SFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDML 437
                                     FFSANVKHAKLQEFLNLEQG ++VEQYDAEFD+L
Sbjct: 181 ETAERALGGDASKITWEQFRESFYAKFFSANVKHAKLQEFLNLEQGKLSVEQYDAEFDLL 240

Query: 438 SRFAPDMVRDEAAGIERFVNGLGLDLRGFA------------------------------ 497
           SRFAPD+VRDEAA  ERFVNGL LDL+GF                               
Sbjct: 241 SRFAPDVVRDEAARTERFVNGLRLDLQGFVRALRPTTHADALRIALDLSLHERAGQSKVV 300

Query: 498 GSGS---------------PVR----------------AAG-TLR--------------- 557
           G+GS               P R                AAG TLR               
Sbjct: 301 GTGSASGQKRKAEAQPDVIPQRTPRSGGVFQRHRRELAAAGRTLRELPTCTTCGKVHGGQ 360

Query: 558 -------------------ACPRKPLETTPRRPYAP--GESLCHDRRAAERASTVVTGTL 617
                              ACPRKPLETTPR+P AP  G     +R+ AERASTVVTGTL
Sbjct: 361 CLAGSGVCFRCRQPGHTADACPRKPLETTPRQPSAPQQGRVFATNRQEAERASTVVTGTL 420

Query: 618 PILGHHALVLFDSGSSHSFISSIFVKHAGLEVEPLGSALSVSTPSGEVLLSKEKIRACWV 677
           PILGH+ALVLFDSGSSHSFISSIFVKHAGLEVEPLGSALSVSTPSGEVLLSKEKIRACWV
Sbjct: 421 PILGHYALVLFDSGSSHSFISSIFVKHAGLEVEPLGSALSVSTPSGEVLLSKEKIRACWV 480

Query: 678 EIANHTLNVTLLVLDMQDFDVILGMDWLSTNHATIDCFNKEVVFNPPSGDKFKFRGAGMV 737
           EIANHTLNVTLLVLDMQDFDVILGMDWLSTNHATIDCFNKEVVFNPPSGDKFKFRGAGMV
Sbjct: 481 EIANHTLNVTLLVLDMQDFDVILGMDWLSTNHATIDCFNKEVVFNPPSGDKFKFRGAGMV 540

Query: 738 GLPKVISAMKASKLLSQGTWGILANVVDMAEPEVSLSSEPVVREYPDVFPDELPGLPPPR 797
           G+PKVISAMKASKLLSQGTWGILANVVDMAEPEVSLSSEPVVREYPDVFPDELPGLPPPR
Sbjct: 541 GIPKVISAMKASKLLSQGTWGILANVVDMAEPEVSLSSEPVVREYPDVFPDELPGLPPPR 600

Query: 798 EVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKK 857
           EVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKK
Sbjct: 601 EVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKK 660

Query: 858 DGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIP 903
           DGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIP
Sbjct: 661 DGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIP 720

[Close]

BLAST of MELO.jh102882.1 vs. NCBI nr
Match: KAA0059723.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 934 bits (2414), Expect = 0.0
Identity = 538/845 (63.67%), Postives = 573/845 (67.81%), Query Frame = 0


Query: 198 MPPRRGARRGGGRGGRGAVVARRRSCRAAGQPDVQSTLMHGHSGGSRRNGQRYHQPAASC 257
           MPPRRGARRGGGRGGRG    +  +  AA   D  + +            QRY     + 
Sbjct: 1   MPPRRGARRGGGRGGRGVGRGQPEAQPAAPAVDPNAPVTQADLAAME---QRYQDMLQAA 60

Query: 258 AVPCFSEPGRLGPACSPSSPVQT-ACSPSGPVRDRPSSLRPGGSSAYTVGEAKHLRIL-- 317
             P       L    + ++PVQ  A  P  P   +P  ++          EAKHLR    
Sbjct: 61  LAPF------LAAQQNQAAPVQAQAVVPPTPEEAQPVPIQ-------LSAEAKHLRDFRK 120

Query: 318 -------GSTTRRLSTDPWTTPLEP---------------------------SFFSANVK 377
                  GS         W T +E                             FFSANVK
Sbjct: 121 YNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVHKITWEQFKENFYAKFFSANVK 180

Query: 378 HAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAAGIERFVNGLGLDLRGFAGSG 437
           HAKLQEFLN EQGDMTVEQYDAEFDMLSRFAPD+VRDEAA +E+FV GL LDL+G   + 
Sbjct: 181 HAKLQEFLNFEQGDMTVEQYDAEFDMLSRFAPDVVRDEAARMEKFVRGLRLDLQGIVRAL 240

Query: 438 SPVRAAGTLR-------------------------------------------------- 497
            P   A  LR                                                  
Sbjct: 241 RPATHADALRIALDLSLPERADSSKATGRGSDLGQKRKVETQPDVVPQRTLRSGGVFQRH 300

Query: 498 ----------------------------------------------ACPRKPLETTPRRP 557
                                                          CPRKP ETTP +P
Sbjct: 301 RRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRLPGHTADVCPRKPFETTPPQP 360

Query: 558 YAP--GESLCHDRRAAERASTVVTGTLPILGHHALVLFDSGSSHSFISSIFVKHAGLEVE 617
            A   G      R+ AERA TVVTGTLPILGH+A VLFDSGSSHSFISS+FV+H GLEVE
Sbjct: 361 SASQQGRVFATTRQEAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVE 420

Query: 618 PLGSALSVSTPSGEVLLSKEKIRACWVEIANHTLNVTLLVLDMQDFDVILGMDWLSTNHA 677
           PLGS LSVSTPSGEVLLSKE+I+ACWVEIANH L+VTLLVLDMQDFDVILGMDWLS NHA
Sbjct: 421 PLGSVLSVSTPSGEVLLSKEQIKACWVEIANHMLDVTLLVLDMQDFDVILGMDWLSANHA 480

Query: 678 TIDCFNKEVVFNPPSGDKFKFRGAGMVGLPKVISAMKASKLLSQGTWGILANVVDMAEPE 737
            IDCF KEVVFNPPSG  FKFRGAGMV +PKVISAMKASKLLSQGTWGILA+VVD+ EPE
Sbjct: 481 NIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDIREPE 540

Query: 738 VSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQ 797
           VSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQ
Sbjct: 541 VSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQ 600

Query: 798 LQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQ 857
           LQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRI+DLFDQ
Sbjct: 601 LQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQ 660

Query: 858 LQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNR 903
           LQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR RYGHYEF+VMSFGLTN PAVFMDLMNR
Sbjct: 661 LQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRLRYGHYEFVVMSFGLTNTPAVFMDLMNR 720

[Close]

BLAST of MELO.jh102882.1 vs. NCBI nr
Match: TYK01306.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 931 bits (2407), Expect = 0.0
Identity = 538/835 (64.43%), Postives = 569/835 (68.14%), Query Frame = 0


Query: 198 MPPRRGARRGGGRGGRGAVVARRRSCRAAGQPDVQSTLMHGHSGGSRRNGQRYHQPAASC 257
           MPPRRGARRGGGRGGRGA   + +    A   D  + +            QRY     + 
Sbjct: 1   MPPRRGARRGGGRGGRGAGRGQPKEQPTAPAVDPNAPVTQADLAAME---QRYQDMLQAA 60

Query: 258 AVPCFSEPGRLGPACSPSSPVQTACSPSGPVRDRPSSLRPGGSSAYTV-----GEAKHLR 317
             P       L    + ++PVQ             + + P  + A  V      EAKHLR
Sbjct: 61  LAPF------LVAQQNQAAPVQAQ-----------TVIPPAHAEAQPVPFQLSAEAKHLR 120

Query: 318 IL---------GSTTRRLSTDPWTTPLEP------------------------------- 377
                      GS         W T +E                                
Sbjct: 121 DFRKYNPKTFDGSMDNPTKAQTWLTSIETIFRGTAWWETAERMLEGDVSKITWEQFKENF 180

Query: 378 --SFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAAGIERFVNGLG 437
              FFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPD+VRDEA   E+FV GL 
Sbjct: 181 YAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDVVRDEAVRTEKFVRGLR 240

Query: 438 LDLRGFAGSGSPVRAAGTLRA--------------------------------------- 497
            DL+G   +  P   A  LR                                        
Sbjct: 241 QDLQGIVRALQPATHADALRIALDLSLHERVDSSKAASRGTTLGQKRKRHRRELAAAGRT 300

Query: 498 -------------------------------------CPRKPLETTPRRPYAP--GESLC 557
                                                CPRKP ETTP +P A   G    
Sbjct: 301 LRELPACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKPFETTPPQPSASQQGRVFA 360

Query: 558 HDRRAAERASTVVTGTLPILGHHALVLFDSGSSHSFISSIFVKHAGLEVEPLGSALSVST 617
             R+ AERA TVVTGTLPILGH+A VLFDSGSSHSFISS+FV+H GLEVEPLGS LSVST
Sbjct: 361 TTRQEAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVST 420

Query: 618 PSGEVLLSKEKIRACWVEIANHTLNVTLLVLDMQDFDVILGMDWLSTNHATIDCFNKEVV 677
           PSGEVLLSKE+I+AC VEIANH LNVTLLVLDMQDFDVILGMDWLS NHA IDCF KEVV
Sbjct: 421 PSGEVLLSKEQIKACRVEIANHMLNVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVV 480

Query: 678 FNPPSGDKFKFRGAGMVGLPKVISAMKASKLLSQGTWGILANVVDMAEPEVSLSSEPVVR 737
           FNPPSG  FKFRGAGMV +PKVISAMKASKLLSQGTWGILA+VVD+ EPEVSLSSEPVVR
Sbjct: 481 FNPPSGASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVR 540

Query: 738 EYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFI 797
           EYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFI
Sbjct: 541 EYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFI 600

Query: 798 RPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKI 857
           RPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQGATVFSKI
Sbjct: 601 RPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKI 660

Query: 858 DLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV 903
           DLRSGYHQLRIRD DIPKTAFR RYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLD FV
Sbjct: 661 DLRSGYHQLRIRDSDIPKTAFRLRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDSFV 720

[Close]

BLAST of MELO.jh102882.1 vs. NCBI nr
Match: KAA0046571.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 920 bits (2379), Expect = 0.0
Identity = 547/871 (62.80%), Postives = 580/871 (66.59%), Query Frame = 0


Query: 198 MPPRRGARRGGGRGGRGAVVARRRSCRAAGQPDVQSTLMHGHSGGSRRNGQRYHQPAASC 257
           MPPRRGARRGGGRGGRGA   +  +   A   D  + +            QRY     + 
Sbjct: 1   MPPRRGARRGGGRGGRGAGRGQPEAPPVAPVVDPNAPVTQADLAAME---QRYQDMLQAA 60

Query: 258 AVPCFSEPGRLGPACSPSSPVQT-ACSPSGPVRDRPSSLRPGGSSAYTVGEAKHLRIL-- 317
             P       L    + ++PVQ  A +P  P   +P  ++          EAKHLR    
Sbjct: 61  LAPF------LAAQQNQAAPVQAQAVAPPAPEEAQPVPVQ-------LSAEAKHLRDFRK 120

Query: 318 -------GSTTRRLSTDPWTTPLEP----------------------------------- 377
                  GS         W T +E                                    
Sbjct: 121 YNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERML 180

Query: 378 ------------------SFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDM 437
                              FFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDM
Sbjct: 181 GGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDM 240

Query: 438 VRDEAAGIERFVNGLGLDLRGF------------------------------AGSGS--- 497
           VRDEAA  E+FV GL LDL+G                               AG GS   
Sbjct: 241 VRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERVDSSKAAGRGSALG 300

Query: 498 ------------PVR----------------AAG-TLR---------------------- 557
                       P R                AAG TLR                      
Sbjct: 301 QKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGV 360

Query: 558 ------------ACPRKPLETTPRRPYAP--GESLCHDRRAAERASTVVTGTLPILGHHA 617
                        CPRKP ETTP +P A   G      ++ AERA TVVTGTLPILGH+A
Sbjct: 361 CFRCRQPGHTADVCPRKPFETTPPQPSAAQQGRVFTTTQQEAERAGTVVTGTLPILGHYA 420

Query: 618 LVLFDSGSSHSFISSIFVKHAGLEVEPLGSALSVSTPSGEVLLSKEKIRACWVEIANHTL 677
            VLFDSGSSHSFISS+FV+H GLEVEPLGS LSVSTPSGEVLLSKE+I+AC VEIAN  L
Sbjct: 421 FVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIANRML 480

Query: 678 NVTLLVLDMQDFDVILGMDWLSTNHATIDCFNKEVVFNPPSGDKFKFRGAGMVGLPKVIS 737
           +VTLLVLDMQDFDVILGMDWLS NHA IDCF KEVVFNPPS   FKFRGAGMV +PKVIS
Sbjct: 481 DVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSEASFKFRGAGMVCIPKVIS 540

Query: 738 AMKASKLLSQGTWGILANVVDMAEPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIE 797
           AMKASKLLSQGTWGILA+VVD+ EPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIE
Sbjct: 541 AMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIE 600

Query: 798 LEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLC 857
           LEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLC
Sbjct: 601 LEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLC 660

Query: 858 IDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSR 903
           IDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSR
Sbjct: 661 IDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSR 720

[Close]

BLAST of MELO.jh102882.1 vs. NCBI nr
Match: KAA0033486.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 907 bits (2345), Expect = 0.0
Identity = 540/871 (62.00%), Postives = 576/871 (66.13%), Query Frame = 0


Query: 198 MPPRRGARRGGGRGGRGAVVARRRSCRAAGQPDVQSTLMHGHSGGSRRNGQRYHQPAASC 257
           MPPRRGARRGGGRG RGA   +  +  AA   D  + +            QRY     + 
Sbjct: 1   MPPRRGARRGGGRGDRGADRGQPEAPPAAPAVDPNAPVTQADLAAME---QRYQDMLQAA 60

Query: 258 AVPCFSEPGRLGPACSPSSPVQT-ACSPSGPVRDRPSSLRPGGSSAYTVGEAKHLRIL-- 317
             P       L    + ++PVQ  A +P  P   +P  ++          EAKHLR    
Sbjct: 61  LAPF------LAAQQNQATPVQAQAVAPPAPEEAQPVPVQ-------LSAEAKHLRDFRK 120

Query: 318 -------GSTTRRLSTDPWTTPLEPSF--------------------------------- 377
                  GS         W T +E  F                                 
Sbjct: 121 YNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGIAWWETAERML 180

Query: 378 --------------------FSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDM 437
                               FSANVKHAKLQEFLNL+QGDMTVEQYD EFDMLSRFAPDM
Sbjct: 181 GGDVSKITWEQFKENFYAKCFSANVKHAKLQEFLNLKQGDMTVEQYDVEFDMLSRFAPDM 240

Query: 438 VRDEAAGIERFVNGLGLDLRGF------------------------------AGSGS--- 497
           VRDEAA  E+FV GL LDL+G                               AG GS   
Sbjct: 241 VRDEAARTEKFVRGLRLDLQGIVRAFRPATHADALRIALDLSLPERADSSKAAGRGSALG 300

Query: 498 ------------PVR----------------AAG-TLR---------------------- 557
                       P R                AAG TLR                      
Sbjct: 301 QKRKVETQPDIVPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGV 360

Query: 558 ------------ACPRKPLETTPRRPYAP--GESLCHDRRAAERASTVVTGTLPILGHHA 617
                        CPRKP ETTP +P A   G      R+ AERA TVVTGTLPILGH+A
Sbjct: 361 CFRCRQPGHTADVCPRKPFETTPPQPSASQQGRVFATTRQEAERAGTVVTGTLPILGHYA 420

Query: 618 LVLFDSGSSHSFISSIFVKHAGLEVEPLGSALSVSTPSGEVLLSKEKIRACWVEIANHTL 677
            VLFD GSSHSFISS+FV+H GLEVEPLGS LSVSTPSGEVLLSKE+I+AC VEIAN  L
Sbjct: 421 FVLFDFGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIANRML 480

Query: 678 NVTLLVLDMQDFDVILGMDWLSTNHATIDCFNKEVVFNPPSGDKFKFRGAGMVGLPKVIS 737
           +VTLLVLDMQDFD+ILGMDWLS NHA IDCF KEVVFNPPSG  FKFRGAGMV +PKVIS
Sbjct: 481 DVTLLVLDMQDFDMILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVIS 540

Query: 738 AMKASKLLSQGTWGILANVVDMAEPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIE 797
           AMKASKLLSQGTWGILA+VVD+ EPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIE
Sbjct: 541 AMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIE 600

Query: 798 LEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLC 857
           LEPGTAPISRAPY+MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLC
Sbjct: 601 LEPGTAPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLC 660

Query: 858 IDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSR 903
           IDYRELNKVTVKN YPLPRI+DLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKTAFRSR
Sbjct: 661 IDYRELNKVTVKNCYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSR 720

[Close]

BLAST of MELO.jh102882.1 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 199.1 bits (505), Expect = 2.2e-49
Identity = 119/335 (35.52%), Postives = 188/335 (56.12%), Query Frame = 0


Query: 579 KASKLLSQGTWGILANVVDMAEPEVSLSSEP---------VVREYPDVFPDELPGLPPPR 638
           +AS L   G +  + + +   EP  +  S           + ++Y ++  ++LP  P P 
Sbjct: 520 EASILEEDGKYSNVVSTIQSVEPNATDHSNKDTFCTLPVWLQQKYREIIRNDLP--PRPA 579

Query: 639 EVD-----FAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVL 698
           +++       IE++PG       PY +     +E+   +Q+LLD  FI PS SP  +PV+
Sbjct: 580 DINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVV 639

Query: 699 FVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIR 758
            V KKDG+ RLC+DYR LNK T+ + +PLPRI++L  ++  A +F+ +DL SGYHQ+ + 
Sbjct: 640 LVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPME 699

Query: 759 DGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFVIVFIDDILIYSK 818
             D  KTAF +  G YE+ VM FGL NAP+ F   M   F+D   +FV V++DDILI+S+
Sbjct: 700 PKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSE 759

Query: 819 TEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTN- 878
           +  EH +HL  VLE L+   L  K  KC+F  ++  FLG+ +  + ++    K  A+ + 
Sbjct: 760 SPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDF 819

Query: 879 GLGRTVGEIRGF-GSAGYYGRFVEDFSR-ASPLMI 897
              +TV + + F G   YY RF+ + S+ A P+ +
Sbjct: 820 PTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPIQL 850

[Close]

BLAST of MELO.jh102882.1 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 199.1 bits (505), Expect = 2.2e-49
Identity = 119/335 (35.52%), Postives = 188/335 (56.12%), Query Frame = 0


Query: 579 KASKLLSQGTWGILANVVDMAEPEVSLSSEP---------VVREYPDVFPDELPGLPPPR 638
           +AS L   G +  + + +   EP  +  S           + ++Y ++  ++LP  P P 
Sbjct: 546 EASILEEDGKYSNVVSTIQSVEPNATDHSNKDTFCTLPVWLQQKYREIIRNDLP--PRPA 605

Query: 639 EVD-----FAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVL 698
           +++       IE++PG       PY +     +E+   +Q+LLD  FI PS SP  +PV+
Sbjct: 606 DINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVV 665

Query: 699 FVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIR 758
            V KKDG+ RLC+DYR LNK T+ + +PLPRI++L  ++  A +F+ +DL SGYHQ+ + 
Sbjct: 666 LVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPME 725

Query: 759 DGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFVIVFIDDILIYSK 818
             D  KTAF +  G YE+ VM FGL NAP+ F   M   F+D   +FV V++DDILI+S+
Sbjct: 726 PKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSE 785

Query: 819 TEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTN- 878
           +  EH +HL  VLE L+   L  K  KC+F  ++  FLG+ +  + ++    K  A+ + 
Sbjct: 786 SPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDF 845

Query: 879 GLGRTVGEIRGF-GSAGYYGRFVEDFSR-ASPLMI 897
              +TV + + F G   YY RF+ + S+ A P+ +
Sbjct: 846 PTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPIQL 876

[Close]

BLAST of MELO.jh102882.1 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 1.3e-46
Identity = 131/448 (29.24%), Postives = 235/448 (52.46%), Query Frame = 0


Query: 459 LFDSGSSHSFIS-SIFVKHAGLEVEPLGSALSVSTPSGEVLLSKEKIRACWVEIANHTLN 518
           L D+GS+ +  S +IF      ++    ++  + T +G ++++K  I     +I   T N
Sbjct: 28  LIDTGSTVNMTSKNIF------DLPIQNTSTFIHTSNGPLIVNKSIIIPS--KILFPTTN 87

Query: 519 VTLLVLDMQDFDVILGMDWLSTNHATIDCFNKEV---------VFNPPSGDKFKFRGAGM 578
             LL    +++D++LG   L+   ATI   ++EV         +    + ++  F+   M
Sbjct: 88  EFLLHPFSENYDLLLGRKLLAEAKATISYRDQEVTLYNNKYKLIEGIATHEQSHFQNVNM 147

Query: 579 VGLPKVISAMKASKLLSQGTWGILANVVDMAEPEVSLSSEPVVREYPDVFPDELPGLPPP 638
           +    +    K S +L    + +     +    E       ++++Y D+   E   L   
Sbjct: 148 IPDTMLRQPNKISPILESDLYRL-----EHLNNEEKQRLCALLQKYHDIQYHEGDKLTFT 207

Query: 639 REVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV-K 698
            +    I  +      S+  Y  A  +  E++ Q+Q++L++G IR S SP+ +P+  V K
Sbjct: 208 NQTKHTINTKHNLPLYSKYSYPQAYEQ--EVESQIQDMLNQGIIRTSNSPYNSPIWVVPK 267

Query: 699 KKDGS----MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRI 758
           K+D S     R+ IDYR+LN++TV +R+P+P ++++  +L     F+ IDL  G+HQ+ +
Sbjct: 268 KQDASGKQKFRIVIDYRKLNEITVGDRHPIPNMDEILGKLGRCNYFTTIDLAKGFHQIEM 327

Query: 759 RDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFVIVFIDDILIYS 818
               + KTAF +++GHYE++ M FGL NAPA F   MN + +  L++  +V++DDI+++S
Sbjct: 328 DPESVSKTAFSTKHGHYEYLRMPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVFS 387

Query: 819 KTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTN 878
            +  EH + L  V E L    L  +  KCEF  ++ TFLGHV++ +G+  +P K+EA+  
Sbjct: 388 TSLDEHLQSLGLVFEKLAKANLKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQK 447

Query: 879 -GLGRTVGEIRGF-GSAGYYGRFVEDFS 890
             +     EI+ F G  GYY +F+ +F+
Sbjct: 448 YPIPTKPKEIKAFLGLTGYYRKFIPNFA 460

[Close]

BLAST of MELO.jh102882.1 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 8.5e-46
Identity = 95/255 (37.25%), Postives = 153/255 (60.00%), Query Frame = 0


Query: 642 APISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD-----GSMRLC 701
           +PI    Y +A     E++ Q+QE+L++G IR S SP+ +P   V KK         R+ 
Sbjct: 205 SPIYSKQYPLAQTHEIEVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVV 264

Query: 702 IDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSR 761
           IDYR+LN++T+ +RYP+P ++++  +L     F+ IDL  G+HQ+ + +  I KTAF ++
Sbjct: 265 IDYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTK 324

Query: 762 YGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQV 821
            GHYE++ M FGL NAPA F   MN + +  L++  +V++DDI+I+S +  EH   +  V
Sbjct: 325 SGHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLV 384

Query: 822 LETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTN-GLGRTVGEIRGF 881
              L    L  +  KCEF  K+  FLGH+V+ +G+  +P KV+A+ +  +     EIR F
Sbjct: 385 FTKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAF 444

Query: 882 -GSAGYYGRFVEDFS 890
            G  GYY +F+ +++
Sbjct: 445 LGLTGYYRKFIPNYA 459

[Close]

BLAST of MELO.jh102882.1 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.6e-44
Identity = 103/303 (33.99%), Postives = 176/303 (58.09%), Query Frame = 0


Query: 592 LANVVDMAEPEVSLSSEPVVREYPDVFPD-ELPGLPPP-REVDFAIELEPGTAPISRAPY 651
           ++N+V   EPE+      + +E+ D+  +     LP P + ++F +EL      +    Y
Sbjct: 365 VSNIV--KEPEL----PDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNY 424

Query: 652 RMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN 711
            + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N
Sbjct: 425 PLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPN 484

Query: 712 RYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGL 771
            YPLP IE L  ++QG+T+F+K+DL+S YH +R+R GD  K AFR   G +E++VM +G+
Sbjct: 485 IYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGI 544

Query: 772 TNAPAVFMDLMNRVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKF 831
           + APA F   +N +  +  +  V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    
Sbjct: 545 STAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQ 604

Query: 832 SKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTN-GLGRTVGEIRGF-GSAGYYGRFVED 891
           +KCEF   +V F+G+ +S +G +     ++ V      +   E+R F GS  Y  +F+  
Sbjct: 605 AKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPK 661

[Close]

BLAST of MELO.jh102882.1 vs. ExPASy TrEMBL
Match: A0A5A7TP01 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1484G00070 PE=4 SV=1)

HSP 1 Score: 983 bits (2540), Expect = 0.0
Identity = 582/878 (66.29%), Postives = 608/878 (69.25%), Query Frame = 0


Query: 198 MPPRRGARRGGGRGGRGAVVARRRSCRAAG--QPDVQSTLMHGHSGGSRRNGQRYHQPAA 257
           MPPRRGARRGGGRGGRGA   +     AA    PDV        +       ++ +Q   
Sbjct: 1   MPPRRGARRGGGRGGRGAGRGQPAEQPAAPPVNPDVPVNPNAPVTQADLAAMEQRYQAML 60

Query: 258 SCAVPCFSEPGRLGPACSPSSPVQTA-CSPSGPVRDRPSSLRPGGSSAYTV-----GEAK 317
             A+  F     L    + ++PVQ     P  PV+D+P  + P    A  V      EAK
Sbjct: 61  QAALAPF-----LAAQQNQAAPVQDQPVVPPAPVQDQP-VIPPAPVEAQPVPVQLSAEAK 120

Query: 318 HLRIL---------GSTTRRLSTDPWTTPLEP---------------------------- 377
           HLR           GS         W T +E                             
Sbjct: 121 HLRDFRKYNPKTFDGSLDNPFRAQLWLTSIETIFRYMKCPEDQKVQCAAFCLEDRGTAWW 180

Query: 378 -------------------------SFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDML 437
                                     FFSANVKHAKLQEFLNLEQG ++VEQYDAEFD+L
Sbjct: 181 ETAERALGGDASKITWEQFRESFYAKFFSANVKHAKLQEFLNLEQGKLSVEQYDAEFDLL 240

Query: 438 SRFAPDMVRDEAAGIERFVNGLGLDLRGFA------------------------------ 497
           SRFAPD+VRDEAA  ERFVNGL LDL+GF                               
Sbjct: 241 SRFAPDVVRDEAARTERFVNGLRLDLQGFVRALRPTTHADALRIALDLSLHERAGQSKVV 300

Query: 498 GSGS---------------PVR----------------AAG-TLR--------------- 557
           G+GS               P R                AAG TLR               
Sbjct: 301 GTGSASGQKRKAEAQPDVIPQRTPRSGGVFQRHRRELAAAGRTLRELPTCTTCGKVHGGQ 360

Query: 558 -------------------ACPRKPLETTPRRPYAP--GESLCHDRRAAERASTVVTGTL 617
                              ACPRKPLETTPR+P AP  G     +R+ AERASTVVTGTL
Sbjct: 361 CLAGSGVCFRCRQPGHTADACPRKPLETTPRQPSAPQQGRVFATNRQEAERASTVVTGTL 420

Query: 618 PILGHHALVLFDSGSSHSFISSIFVKHAGLEVEPLGSALSVSTPSGEVLLSKEKIRACWV 677
           PILGH+ALVLFDSGSSHSFISSIFVKHAGLEVEPLGSALSVSTPSGEVLLSKEKIRACWV
Sbjct: 421 PILGHYALVLFDSGSSHSFISSIFVKHAGLEVEPLGSALSVSTPSGEVLLSKEKIRACWV 480

Query: 678 EIANHTLNVTLLVLDMQDFDVILGMDWLSTNHATIDCFNKEVVFNPPSGDKFKFRGAGMV 737
           EIANHTLNVTLLVLDMQDFDVILGMDWLSTNHATIDCFNKEVVFNPPSGDKFKFRGAGMV
Sbjct: 481 EIANHTLNVTLLVLDMQDFDVILGMDWLSTNHATIDCFNKEVVFNPPSGDKFKFRGAGMV 540

Query: 738 GLPKVISAMKASKLLSQGTWGILANVVDMAEPEVSLSSEPVVREYPDVFPDELPGLPPPR 797
           G+PKVISAMKASKLLSQGTWGILANVVDMAEPEVSLSSEPVVREYPDVFPDELPGLPPPR
Sbjct: 541 GIPKVISAMKASKLLSQGTWGILANVVDMAEPEVSLSSEPVVREYPDVFPDELPGLPPPR 600

Query: 798 EVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKK 857
           EVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKK
Sbjct: 601 EVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKK 660

Query: 858 DGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIP 903
           DGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIP
Sbjct: 661 DGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIP 720

[Close]

BLAST of MELO.jh102882.1 vs. ExPASy TrEMBL
Match: A0A5A7UUX8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1395G00080 PE=4 SV=1)

HSP 1 Score: 934 bits (2414), Expect = 0.0
Identity = 538/845 (63.67%), Postives = 573/845 (67.81%), Query Frame = 0


Query: 198 MPPRRGARRGGGRGGRGAVVARRRSCRAAGQPDVQSTLMHGHSGGSRRNGQRYHQPAASC 257
           MPPRRGARRGGGRGGRG    +  +  AA   D  + +            QRY     + 
Sbjct: 1   MPPRRGARRGGGRGGRGVGRGQPEAQPAAPAVDPNAPVTQADLAAME---QRYQDMLQAA 60

Query: 258 AVPCFSEPGRLGPACSPSSPVQT-ACSPSGPVRDRPSSLRPGGSSAYTVGEAKHLRIL-- 317
             P       L    + ++PVQ  A  P  P   +P  ++          EAKHLR    
Sbjct: 61  LAPF------LAAQQNQAAPVQAQAVVPPTPEEAQPVPIQ-------LSAEAKHLRDFRK 120

Query: 318 -------GSTTRRLSTDPWTTPLEP---------------------------SFFSANVK 377
                  GS         W T +E                             FFSANVK
Sbjct: 121 YNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVHKITWEQFKENFYAKFFSANVK 180

Query: 378 HAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAAGIERFVNGLGLDLRGFAGSG 437
           HAKLQEFLN EQGDMTVEQYDAEFDMLSRFAPD+VRDEAA +E+FV GL LDL+G   + 
Sbjct: 181 HAKLQEFLNFEQGDMTVEQYDAEFDMLSRFAPDVVRDEAARMEKFVRGLRLDLQGIVRAL 240

Query: 438 SPVRAAGTLR-------------------------------------------------- 497
            P   A  LR                                                  
Sbjct: 241 RPATHADALRIALDLSLPERADSSKATGRGSDLGQKRKVETQPDVVPQRTLRSGGVFQRH 300

Query: 498 ----------------------------------------------ACPRKPLETTPRRP 557
                                                          CPRKP ETTP +P
Sbjct: 301 RRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRLPGHTADVCPRKPFETTPPQP 360

Query: 558 YAP--GESLCHDRRAAERASTVVTGTLPILGHHALVLFDSGSSHSFISSIFVKHAGLEVE 617
            A   G      R+ AERA TVVTGTLPILGH+A VLFDSGSSHSFISS+FV+H GLEVE
Sbjct: 361 SASQQGRVFATTRQEAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVE 420

Query: 618 PLGSALSVSTPSGEVLLSKEKIRACWVEIANHTLNVTLLVLDMQDFDVILGMDWLSTNHA 677
           PLGS LSVSTPSGEVLLSKE+I+ACWVEIANH L+VTLLVLDMQDFDVILGMDWLS NHA
Sbjct: 421 PLGSVLSVSTPSGEVLLSKEQIKACWVEIANHMLDVTLLVLDMQDFDVILGMDWLSANHA 480

Query: 678 TIDCFNKEVVFNPPSGDKFKFRGAGMVGLPKVISAMKASKLLSQGTWGILANVVDMAEPE 737
            IDCF KEVVFNPPSG  FKFRGAGMV +PKVISAMKASKLLSQGTWGILA+VVD+ EPE
Sbjct: 481 NIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDIREPE 540

Query: 738 VSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQ 797
           VSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQ
Sbjct: 541 VSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQ 600

Query: 798 LQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQ 857
           LQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRI+DLFDQ
Sbjct: 601 LQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQ 660

Query: 858 LQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNR 903
           LQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR RYGHYEF+VMSFGLTN PAVFMDLMNR
Sbjct: 661 LQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRLRYGHYEFVVMSFGLTNTPAVFMDLMNR 720

[Close]

BLAST of MELO.jh102882.1 vs. ExPASy TrEMBL
Match: A0A5D3BSV9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold827G00060 PE=4 SV=1)

HSP 1 Score: 931 bits (2407), Expect = 0.0
Identity = 538/835 (64.43%), Postives = 569/835 (68.14%), Query Frame = 0


Query: 198 MPPRRGARRGGGRGGRGAVVARRRSCRAAGQPDVQSTLMHGHSGGSRRNGQRYHQPAASC 257
           MPPRRGARRGGGRGGRGA   + +    A   D  + +            QRY     + 
Sbjct: 1   MPPRRGARRGGGRGGRGAGRGQPKEQPTAPAVDPNAPVTQADLAAME---QRYQDMLQAA 60

Query: 258 AVPCFSEPGRLGPACSPSSPVQTACSPSGPVRDRPSSLRPGGSSAYTV-----GEAKHLR 317
             P       L    + ++PVQ             + + P  + A  V      EAKHLR
Sbjct: 61  LAPF------LVAQQNQAAPVQAQ-----------TVIPPAHAEAQPVPFQLSAEAKHLR 120

Query: 318 IL---------GSTTRRLSTDPWTTPLEP------------------------------- 377
                      GS         W T +E                                
Sbjct: 121 DFRKYNPKTFDGSMDNPTKAQTWLTSIETIFRGTAWWETAERMLEGDVSKITWEQFKENF 180

Query: 378 --SFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAAGIERFVNGLG 437
              FFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPD+VRDEA   E+FV GL 
Sbjct: 181 YAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDVVRDEAVRTEKFVRGLR 240

Query: 438 LDLRGFAGSGSPVRAAGTLRA--------------------------------------- 497
            DL+G   +  P   A  LR                                        
Sbjct: 241 QDLQGIVRALQPATHADALRIALDLSLHERVDSSKAASRGTTLGQKRKRHRRELAAAGRT 300

Query: 498 -------------------------------------CPRKPLETTPRRPYAP--GESLC 557
                                                CPRKP ETTP +P A   G    
Sbjct: 301 LRELPACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKPFETTPPQPSASQQGRVFA 360

Query: 558 HDRRAAERASTVVTGTLPILGHHALVLFDSGSSHSFISSIFVKHAGLEVEPLGSALSVST 617
             R+ AERA TVVTGTLPILGH+A VLFDSGSSHSFISS+FV+H GLEVEPLGS LSVST
Sbjct: 361 TTRQEAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVST 420

Query: 618 PSGEVLLSKEKIRACWVEIANHTLNVTLLVLDMQDFDVILGMDWLSTNHATIDCFNKEVV 677
           PSGEVLLSKE+I+AC VEIANH LNVTLLVLDMQDFDVILGMDWLS NHA IDCF KEVV
Sbjct: 421 PSGEVLLSKEQIKACRVEIANHMLNVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVV 480

Query: 678 FNPPSGDKFKFRGAGMVGLPKVISAMKASKLLSQGTWGILANVVDMAEPEVSLSSEPVVR 737
           FNPPSG  FKFRGAGMV +PKVISAMKASKLLSQGTWGILA+VVD+ EPEVSLSSEPVVR
Sbjct: 481 FNPPSGASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVR 540

Query: 738 EYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFI 797
           EYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFI
Sbjct: 541 EYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFI 600

Query: 798 RPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKI 857
           RPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQGATVFSKI
Sbjct: 601 RPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKI 660

Query: 858 DLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV 903
           DLRSGYHQLRIRD DIPKTAFR RYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLD FV
Sbjct: 661 DLRSGYHQLRIRDSDIPKTAFRLRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDSFV 720

[Close]

BLAST of MELO.jh102882.1 vs. ExPASy TrEMBL
Match: A0A5A7TZ22 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold114G00990 PE=4 SV=1)

HSP 1 Score: 920 bits (2379), Expect = 0.0
Identity = 547/871 (62.80%), Postives = 580/871 (66.59%), Query Frame = 0


Query: 198 MPPRRGARRGGGRGGRGAVVARRRSCRAAGQPDVQSTLMHGHSGGSRRNGQRYHQPAASC 257
           MPPRRGARRGGGRGGRGA   +  +   A   D  + +            QRY     + 
Sbjct: 1   MPPRRGARRGGGRGGRGAGRGQPEAPPVAPVVDPNAPVTQADLAAME---QRYQDMLQAA 60

Query: 258 AVPCFSEPGRLGPACSPSSPVQT-ACSPSGPVRDRPSSLRPGGSSAYTVGEAKHLRIL-- 317
             P       L    + ++PVQ  A +P  P   +P  ++          EAKHLR    
Sbjct: 61  LAPF------LAAQQNQAAPVQAQAVAPPAPEEAQPVPVQ-------LSAEAKHLRDFRK 120

Query: 318 -------GSTTRRLSTDPWTTPLEP----------------------------------- 377
                  GS         W T +E                                    
Sbjct: 121 YNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERML 180

Query: 378 ------------------SFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDM 437
                              FFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDM
Sbjct: 181 GGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDM 240

Query: 438 VRDEAAGIERFVNGLGLDLRGF------------------------------AGSGS--- 497
           VRDEAA  E+FV GL LDL+G                               AG GS   
Sbjct: 241 VRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERVDSSKAAGRGSALG 300

Query: 498 ------------PVR----------------AAG-TLR---------------------- 557
                       P R                AAG TLR                      
Sbjct: 301 QKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGV 360

Query: 558 ------------ACPRKPLETTPRRPYAP--GESLCHDRRAAERASTVVTGTLPILGHHA 617
                        CPRKP ETTP +P A   G      ++ AERA TVVTGTLPILGH+A
Sbjct: 361 CFRCRQPGHTADVCPRKPFETTPPQPSAAQQGRVFTTTQQEAERAGTVVTGTLPILGHYA 420

Query: 618 LVLFDSGSSHSFISSIFVKHAGLEVEPLGSALSVSTPSGEVLLSKEKIRACWVEIANHTL 677
            VLFDSGSSHSFISS+FV+H GLEVEPLGS LSVSTPSGEVLLSKE+I+AC VEIAN  L
Sbjct: 421 FVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIANRML 480

Query: 678 NVTLLVLDMQDFDVILGMDWLSTNHATIDCFNKEVVFNPPSGDKFKFRGAGMVGLPKVIS 737
           +VTLLVLDMQDFDVILGMDWLS NHA IDCF KEVVFNPPS   FKFRGAGMV +PKVIS
Sbjct: 481 DVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSEASFKFRGAGMVCIPKVIS 540

Query: 738 AMKASKLLSQGTWGILANVVDMAEPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIE 797
           AMKASKLLSQGTWGILA+VVD+ EPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIE
Sbjct: 541 AMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIE 600

Query: 798 LEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLC 857
           LEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLC
Sbjct: 601 LEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLC 660

Query: 858 IDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSR 903
           IDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSR
Sbjct: 661 IDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSR 720

[Close]

BLAST of MELO.jh102882.1 vs. ExPASy TrEMBL
Match: A0A5A7SU25 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold261G00200 PE=4 SV=1)

HSP 1 Score: 907 bits (2345), Expect = 0.0
Identity = 540/871 (62.00%), Postives = 576/871 (66.13%), Query Frame = 0


Query: 198 MPPRRGARRGGGRGGRGAVVARRRSCRAAGQPDVQSTLMHGHSGGSRRNGQRYHQPAASC 257
           MPPRRGARRGGGRG RGA   +  +  AA   D  + +            QRY     + 
Sbjct: 1   MPPRRGARRGGGRGDRGADRGQPEAPPAAPAVDPNAPVTQADLAAME---QRYQDMLQAA 60

Query: 258 AVPCFSEPGRLGPACSPSSPVQT-ACSPSGPVRDRPSSLRPGGSSAYTVGEAKHLRIL-- 317
             P       L    + ++PVQ  A +P  P   +P  ++          EAKHLR    
Sbjct: 61  LAPF------LAAQQNQATPVQAQAVAPPAPEEAQPVPVQ-------LSAEAKHLRDFRK 120

Query: 318 -------GSTTRRLSTDPWTTPLEPSF--------------------------------- 377
                  GS         W T +E  F                                 
Sbjct: 121 YNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGIAWWETAERML 180

Query: 378 --------------------FSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDM 437
                               FSANVKHAKLQEFLNL+QGDMTVEQYD EFDMLSRFAPDM
Sbjct: 181 GGDVSKITWEQFKENFYAKCFSANVKHAKLQEFLNLKQGDMTVEQYDVEFDMLSRFAPDM 240

Query: 438 VRDEAAGIERFVNGLGLDLRGF------------------------------AGSGS--- 497
           VRDEAA  E+FV GL LDL+G                               AG GS   
Sbjct: 241 VRDEAARTEKFVRGLRLDLQGIVRAFRPATHADALRIALDLSLPERADSSKAAGRGSALG 300

Query: 498 ------------PVR----------------AAG-TLR---------------------- 557
                       P R                AAG TLR                      
Sbjct: 301 QKRKVETQPDIVPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGV 360

Query: 558 ------------ACPRKPLETTPRRPYAP--GESLCHDRRAAERASTVVTGTLPILGHHA 617
                        CPRKP ETTP +P A   G      R+ AERA TVVTGTLPILGH+A
Sbjct: 361 CFRCRQPGHTADVCPRKPFETTPPQPSASQQGRVFATTRQEAERAGTVVTGTLPILGHYA 420

Query: 618 LVLFDSGSSHSFISSIFVKHAGLEVEPLGSALSVSTPSGEVLLSKEKIRACWVEIANHTL 677
            VLFD GSSHSFISS+FV+H GLEVEPLGS LSVSTPSGEVLLSKE+I+AC VEIAN  L
Sbjct: 421 FVLFDFGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIANRML 480

Query: 678 NVTLLVLDMQDFDVILGMDWLSTNHATIDCFNKEVVFNPPSGDKFKFRGAGMVGLPKVIS 737
           +VTLLVLDMQDFD+ILGMDWLS NHA IDCF KEVVFNPPSG  FKFRGAGMV +PKVIS
Sbjct: 481 DVTLLVLDMQDFDMILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVIS 540

Query: 738 AMKASKLLSQGTWGILANVVDMAEPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIE 797
           AMKASKLLSQGTWGILA+VVD+ EPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIE
Sbjct: 541 AMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIE 600

Query: 798 LEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLC 857
           LEPGTAPISRAPY+MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLC
Sbjct: 601 LEPGTAPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLC 660

Query: 858 IDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSR 903
           IDYRELNKVTVKN YPLPRI+DLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKTAFRSR
Sbjct: 661 IDYRELNKVTVKNCYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSR 720

[Close]

BLAST of MELO.jh102882.1 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 64.3 bits (155), Expect = 5.9e-10
Identity = 35/83 (42.17%), Postives = 50/83 (60.24%), Query Frame = 0


Query: 812 HLHQVLETLRAHKLYAKFSKCEFWLKKVTFLG--HVVSSEGVSVDPAKVEAVTN-GLGRT 871
           HL  VL+    H+ YA   KC F   ++ +LG  H++S EGVS DPAK+EA+      + 
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 872 VGEIRGF-GSAGYYGRFVEDFSR 891
             E+RGF G  GYY RFV+++ +
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGK 85

The following BLAST results are available for this feature:

BLAST of MELO.jh102882.1 vs. NCBI nr


Match Name	Identity	Description
KAA0025917.1	66.29	pol protein [Cucumis melo var. makuwa] >KAA0042949.1 pol protein [Cucumis melo v...	[more]
KAA0059723.1	63.67	pol protein [Cucumis melo var. makuwa]	[more]
TYK01306.1	64.43	pol protein [Cucumis melo var. makuwa]	[more]
KAA0046571.1	62.80	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0033486.1	62.00	reverse transcriptase [Cucumis melo var. makuwa]	[more]

BLAST of MELO.jh102882.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q99315	2.2e-49	35.52	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	2.2e-49	35.52	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
P04323	1.3e-46	29.24	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P20825	8.5e-46	37.25	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
P0CT41	3.6e-44	33.99	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]

BLAST of MELO.jh102882.1 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A5A7TP01	66.29	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold14...	[more]
A0A5A7UUX8	63.67	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13...	[more]
A0A5D3BSV9	64.43	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold82...	[more]
A0A5A7TZ22	62.80	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold11...	[more]
A0A5A7SU25	62.00	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold26...	[more]

BLAST of MELO.jh102882.1 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	5.9e-10	42.17	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF08284	RVP_2	coord: 437..556 e-value: 4.4E-37 score: 126.9
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 632..771 e-value: 1.3E-94 score: 317.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 273..287
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 270..302
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 227..250
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 221..250
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..133
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 434..726
None	No IPR available	PANTHER	PTHR24559:SF330	RNA-DIRECTED DNA POLYMERASE HOMOLOG	coord: 434..726
None	No IPR available	CDD	cd00303	retropepsin_like	coord: 474..537 e-value: 4.42898E-11 score: 58.1168
None	No IPR available	CDD	cd01647	RT_LTR	coord: 670..846 e-value: 1.6681E-98 score: 304.133
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 435..563 e-value: 7.4E-23 score: 82.8
IPR021109	Aspartic peptidase domain superfamily	SUPERFAMILY	50630	Acid proteases	coord: 448..546
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 333..389 e-value: 1.8E-8 score: 34.5
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 711..846 e-value: 1.3E-94 score: 317.4
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 686..845 e-value: 1.1E-27 score: 97.0
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 667..846 score: 10.884519
IPR001969	Aspartic peptidase, active site	PROSITE	PS00141	ASP_PROTEASE	coord: 458..469
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 610..891

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO.jh102882.1.t1	MELO.jh102882.1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0004190	aspartic-type endopeptidase activity