MELO.jh102828.1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh102828.1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Pol protein
Location	chr12: 6833054 .. 6840374 (+)
RNA-Seq Expression	MELO.jh102828.1
Synteny	MELO.jh102828.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTCATTACCGGGCTACCGAGAACTCTGAGGGGATTTACAGTGATCTGGGTTGTGGTGGACAGACTTACTAAATCAGCGCACTTTGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGTTGTACATGTCTGAGATAGTGAGATTGCACGGAGTGCCAGTGTCGATTGTTTCTGACAGAGATGCCCGTTTCACTTCCAAATTTTGGAAGGGTTTGCAGACTGCTATGGGCACGAGATTGGACTTTAGTACGGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAGGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTACATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCGTTTGAGGCCCTGTACGGCAAATGTTGTAGATCCCCGGTTTGCTGGGATGAGGTAGGTGAGCAGAGATTGATGGGTCCTGAGTTAGTTCAGTCTACTAACGAAGCGATTCAGAAGATTAGATCACGCATGCATACCGCTCAGAGTAGACAGAAGAGTTATGCAGATGTGAGGCGGAAGGATCTTGAGTTTGAGGTAGGGGATAAGGTGTTCTTAAAGGTAGCACCTATGAGAGGTGTCGTGCGTTTTGAAAGGAGGGGAAAGCTGAATCCCCGTTTTGTTGGGCCGTTTGAGATTCTGGAGCGGATTGGCCCTGTAGCTTATCGCTTGGCGTTGCCTCCATCACTCTCGACAGTCCATGATGTGTTTCACGTTTCTATGTTGAGGAAGTACGTGCCAGATCCATCCCATGTAGTGGATTACGAGCCACTAGAGATTGATGAGAACTTGAGCTATGTCGAACAGCCCGTTGAGATACTGGCTAGAGAGGTGAAAACGTTGAGGAATAAGGAAATCCCTCTGGTTAAAGTCTTATGGCGGAATCACCGGATAGAAGAGGCTACGTGGGAGCGAGAAGATGACATGAGGTCCCGTTATCCCGAACTGTTCGAAGGGTAAAACTTTCGAGGACGAAAGTTCCCTAAGGAGGGAAGAATGTAACGTCCCGAAGCTCGAGGTAAAAATTTTCGCGTTTTAAGTGAATTTTAATAATATAATATTAATTATATTATTAGTATTGGGTATTATTGTCGTTCAATTTTAATGTTAATATATTTTTCCTTTTACTATTTATTTAAAATAAATATTAATATTATTATTTAATATTATTATAATTATTTAGTAGTAATATATTATTATAAATTATATTTACTTTGATTAATATATATTATTATTGATTATTAATAGAATTAATTAATATTAATATTTAATCATTAGTTATAATTATTATTATATAATATATATATTAATATTATTATTATTATTTTCTAAACTTAATATATTTATATATATATATATATATAAAAAAAAAAAAAAGAGAAGAAGGAAACCCTAAAACGCGCGAGCCCCCTCCATTTTCGTTTTCTCTCCCTCGCGCCGCCGCCGCTCCTCCTCCTCCTTCTTCTTCTTCCGTCATCGCAACCCCATCGTTTTCTTTCTTTTCTCTTTTCCCTTCCGTTCGCGCACATCTCCGTCTCCGTCTCCTGTTCCGCCTCCAGCGTCGTCAGCTTCATCGTGTTCGTCCGCCGCGGCCTCCCCATCCATTTCGGACCTCCTCTCGGCTTCAAATCGTCCTCCGCCGTCAAGCCGTCGTCCTCCGCCGCGTGAAAGCAGAACCAGCTGTCGGATTCCACCCAGCCGCGACTCACCCCGTCGTAGAACGCCTCCCAGCTGTCGTTCGTCACGGTCGTCGGACGCCGGAGAGCCATCGTTCGTGTTGCCCGTTTTCCGCTGCAAAAACCCGACCCGGTTCCAAGCTGACCCGACCCGAAACCGCTTCCAGTCCGAGCCGAGTGAGCCGCGTGAGCCGGCGAGCGAGCCGCGTGAGCCGAGCCGAGCGAGCCGCTGAGCCGAGCCGCGAGCCGAGTGAGCCGAGCCGCGAGCCGAGCCGCGAGCCGAGCAAGCCGCCGAGCCGAGAACCAAACCGAGCCGAGCCAGCGAGGAGCCAACCGAGCCGAGCCGAGCGAGCCAATCCGAGCCGAGAGCGAGCCGAGAACCAAGCCGAGTCAAGCCGAGTCGAGCCAAGCCGAGCCGAGCCGAGCCGAGCCGAGCGAGTCGAGCCGAGCCGAGCCGAGCCGAGCCGAGTCCAAGCCGAGCCGAGCCGAGCCACCTAAGCCTTCCTTCCTCCACTTCGGTTCACGGTGAGTCTTCGGTAAGGGTTGTTTGATGAATTCCCTAATGTTACCTCGTCCGATTCGAGTTTGAATGTTGGATTAAGATGTGGCCCTACTTTTCTCCCTTGAAGGTAGCACAGAGTTGACGCTTAAGTTCTCGGGTTCCGCGGCAGACCTGGTTGGAGATAGCTTCCTTTCCTTGAGTAAGTCAACGGATAACCTTTTTAAAACAATTGCTACTAACGTCATCAACTAAAACCGTTGTGTTTTCGTTTAGGTTGATCTGTTGAGCGTGGATTCAATCGAGAGGCATAACCGAGTATCAGGTAAGGGTTTTCCTACTACTGGACCCCGAGTCCAGGCTGAAAACGTAGTAATTCACATGGAATTACACGTTAGTGACTGTACTGAATAACTGTATGCGTGTTGGCTGTTAAGTACTGATATTATATTCTGTCTGATGCAAATATACTGTGACTGATAATTGTGGATTGAGATTTTATGTTGATGGACCTTGAAGTTATGGTTCAGTATGTAGTAAACACCGGTCTGGATGTGGTTCATGGAATTTGGACGGGGATGGACCGTGAGTCCGGTTTTGGTTGGTTAGTCGATTGGACCTAGGGTTTTCCCTATTGGTGTGCGAATCGGTAATGCATATAGCAACTGAGGGTGTAGATGTTTAAACTTATACTATCTGACTGATAAAGCCTATGGCGGGACTGTGATATAAATGTCGTTGGGATGTGATTGATGCAGACAGTTTAGTGTGGACTGAGGGGTAACGGTTAGCTTCATCTATGGGGTAGTGTGCCTTACGGATATGTGCATCCTTCGGGAGCACTAGACTGATATGTGCATCCTTCGGGAGCACAAGACTGATATGTGCATCCTTCGGAGCACTGGGCGATATGTGCGTCCTTCGGGAGCACTAGGCGATATGTGCGTCCTTCGGGAGCACTGGGCGATATGTGCGTCCTTCGGGAGCACTAGACTGATATGTGCATCCTTCGGGAGCACTAGACTGATATGTGCATCCTTCGGGAGCACTAGACTGATATGTGCATCCTTCGGGAGCACTAGACTGATATGTAGGGTACCCCCGAATAGGAAGTTAACTGTTGTCCCCTAACGGGCCCAGTAGTGGGTCCCTTACTGGGTATGTTTATACTCACCCTTTTTCTTCTTTAACTTTTCAGGTAGGGGTACAGCGAGGGGCAGACCGACGAGAGGCAGGAAGGATGCGTGAAGGCCATATGGACGCGTCTGATTTTCTTTCGCTTCCGCTATGTATTTTGTCAGAATATTTTGATTGTGATTTTTGGACTGGTGACTTGACATTTTATCTTGTGATTTTTTTTAAATTATTTAAAATAGGGCCCGAAACTGTCTTTTGTAAGGTTTATACTGTTTTAATGAATCGTATCTGGTCCGTTTTGGATTTTACGTTGAATGGTCGAGTTTCGGTATTTGGTAGTGACCTCAGCTTGGTCCGGAAAAGTTGGGTCGTTACAAAAGGATGGTATTGGCTAAATCTAAAACCTCAAGATTTCCCTCGTTAGAAATAGTGAAAATCCCAAAACTATTATTTAGTGAAATGAATAGATGGAAAAATTACCTTAAACCCACATCCTTGATTCGAAAAACTCAAGAACGAAAAACATGGTTTCGTCGTTGGTTTCGTTGAACGACGAACAAAAATCAGGTGTCGTGAAAAAGTGTCGTTTTGACGTGGGTTTTGGTTGAACAATAAACAGGGTGGATTTTATGTTTCGACGTAGGTTTCTGTTGAATGACGACGAGGTGGGTTACATTTCGGCAATTGTCGTTTCAGTGTGGTCCCCTGCATCCCCTACGATCTGGCAACATTATCCTTACTATCTTAAAGGCTTATTGGAGCGAAAGCTCTCCCCACAAACTAGCACGAGTCCTTTCAGCATGTTTTGTCCTCACTCACATGCATCCTAGGAAATTTCCATAGAGATCACCCAATATAGAATTGCTCCAAGCTAAAGCAACGCTTAACTTTGGAGTTTCTATGATCGAGCCACCGAAAAGGAAGGTTGCACCTTTTTAGTATATGTAGTAACTTTTAATTCTTTTAAGTTATTCTTAACCTTACTTTCATGTCTTCAGGATCCCTCTCATTTATATGCAATATGAATTCATTCATGTCTCCCTCCAAAACTCAAGAGTTACAGTGACGGTGGACGGAGACAACCCCAACCGACAGAGAGACGACAAACTCGCGAACGGCAGCCATGAAAAGGTTTTGTGGATTTTATGTGTTTTGAACAGAGAGTTTGTTGTGAGTGGCTAGCGTGAAGAGGAGAGGGAGAATCATGAAAAAGAAAGGGGGAAGGGTCCAAAATTTTGGTGAGCTAAATTACTTTTTTTATTTCCCTTTTTTTTCTTTTTAATAGCCCAATTTTAAAATGGATGATCTTCAAAGGCTATTAAAAGCCTTATTTCTTGTAGTGGCACATCCAATCATTATTTGTTTATATGGTTTTTTATTGTCTATTTTATGTACCTAAGTGAGCATATCTTCTTTACATGTATTTTTGGACAACTCTACGTGACCCTTGATAATAATATAAAGACAAATTCCTCGTTAGTTAGATTTTCAAAGCTTTGTGTATATATTGATTAATGTAATTTGCTAAAGGTTACTTAGTTAAACGATTTGTCACCTTGTTTGTTGTGAAGGAGATAATTTTGTGTTTGTTGAGAGTTGTGCTGTATACAATAGAAGAGATATTATTGTTTCTTGAAGAAAAAAAAGAGATTATTGATTTGCACATTCGTAAGCATTATATACCGATACATTTGATGTTTGTTTAATTTCAAGTATTTGATCGTCATTAAAAATGGATTGGACAATGTGGTAATTATTGAATAAAATTGGTGACAAACCGACGTAGAAGACATTGAAATGATCTACAATGTCAGTTTTTAAATGACATTGTTGGGAATCTATAATGTAAGTTTAAAGCCAACATCAAATCACAACAACCATTAAATGGCTTTAATAACATGAGCATAGTTGTCGGTCTAAAATTGACATCGTACCTCTTTAATGTTGTTTTTAAATTGACATTAAAGAACCGGCCTTAAAGGATTATTTAATGTCGGTTTAAAACCAACATCAAAGCACAACCGACATTAAAGAGCTTTAATAACACGATCATAGATATCGGTTGTCAACTGACATCATACCTCTTTAATGTCACTTTATTACAGTCCAATTTTGTTGTAGTGATTATAGTGAGCATTATGGCATCCCGCTCGGAGGCGCTAGGGCTGCTCAAGTCATGGTCACGTCTCGCAACGCGAGGGTTAGGGTGCGTTGCGGGACAGGACGTGACAACAATCATCCAACTATAAACACAAAAACCTATGACCAAAAGAACAAGGAATGTTTTAAAAAACGGAAGAAATAAAGGATGATTTTTACGGTCAATCAAAACACTAGCATGTTGGATTTAGAAGATATGTCATTGACAGTGGATATGAAGGGCCAAATTAACTTAAACTGTAGATGTATGTTGTGGGATGTCGATTAAGTTTACGTGATAAATGGGTTGCGGGCGGTCGAAAATGCAAATGAAAAACAGTGAGTTAAGAGGAGCGAGAGCGACAATGAAGAGAAGAAGAAGAGAAAGATATAGGGAGGAAAGAGGGAGAGAGATCAAGGAGAAGAGATAAGTTGCTTTATTTTATTTATTCAATTTTAAATATTAATAGAAGACTTTTGCCAACAGAAGCTTTCATACAAAAATAACAGAATGACCCTTTAAACATCTCTTGCTAAACTTAGATCCATTTGAGTTTCTAAAACTCAAAAGACCAAATCAACATATAACTCAAAATTTAAGGATAAATAAAAAGTATTTTTTCCTAACTTTTCTTATCTTAAAGAAAAACTAACCTTTTAAAGTAAAAACTAATTCTCCCCAAATTATATATTCTAAATTTATAGTTTGAGAATAAAATGATAAAAGGAAGAATAGTTATACATATGTATATACATATATGTGTATATGTATATATATGTATGTATATGTATAGTATCATAGATGGGAACTTATTTTGGAGTATAGTGTATTGGATCAAAACATTGACAAAATATATCAAACTTTCAGATTTTATTAAAGATAGACATAAATAGACTTCTATCGATGTATACCAATACATATTTAATAGACATAGATAGAATTTTATTAGTGTCGATCTTTGCTAAAATATGATATTTTGCTATATTTGTAAATATTTTCAGTAATTTTATCATTTTATGTAATTTTTTATTTATTTTTGTTGCCTTTTTCTCTGGGTTCAAAAATGAATCGTCACTCTCACATTAATAGCAATATGTTTCTTATTCGTTTACAATAAATGTCGATCTTTGTTTTTTTTTTTCTTTTTCCTCTTTTTTTTATTTATTATTATCCTTATTATTATTATTTTGTCTTTGTCCTATTCATTTGATAGCCTTTCTTAATTTCCTTCGACCGAAATTTTCCTTCGAATTGTATCCATATATAAAAAAGAAAAAAATCATCTTTTTTTTACACCACAATATTTCATTGATAACTCGCATCCTCAAGTGTGGAATCTTTGCAACTAAAGGAACATCCTATTTATTTGTATACAGAAAACACCATATTGCAGCATTTTGTTAACCTTGTTCATTTATTATGCGTTAATATTTTGATGTATTCAAGTTGCATTCATCTCCATACATTCTCTTTAATCACAAAAGAAAAAAAAAACATTTTAAAATTATAATTGGGTACAGCAGAACCAAATGTTTTCCTTAATTATTTATGCATATGATATTTACTTGACAAAGATGTTACATTGTGTTTCTTCTTGATTTCAAACTTAAGTTGAAACAGATGAGGGAAGAAACTGAGAAGCTTCATATTTGTACACATGTTCAGTACCATTCATATGTTTGGGGCTTATAAATATGCTATTAGTTTTGGCTTTTAAAATCCACTACAAATCAAAAGCAAAGCCACCTTGCTTTGGTTATTGGTCTATACAAAGAAAATACTTAA

mRNA sequence

ATGGATTTCATTACCGGGCTACCGAGAACTCTGAGGGGATTTACAGTGATCTGGGTTGTGGTGGACAGACTTACTAAATCAGCGCACTTTGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGTTGTACATGTCTGAGATAGTGAGATTGCACGGAGTGCCAGTGTCGATTGTTTCTGACAGAGATGCCCGTTTCACTTCCAAATTTTGGAAGGGTTTGCAGACTGCTATGGGCACGAGATTGGACTTTAGTACGGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAGGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTACATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCGTTTGAGGCCCTGTACGGCAAATGTTGTAGATCCCCGGTTTGCTGGGATGAGGTAGGTGAGCAGAGATTGATGGGTCCTGAGTTAGTTCAGTCTACTAACGAAGCGATTCAGAAGATTAGATCACGCATGCATACCGCTCAGAGTAGACAGAAGAGTTATGCAGATGTGAGGCGGAAGGATCTTGAGTTTGAGGTAGGGGATAAGGTGTTCTTAAAGGTAGCACCTATGAGAGGTGTCGTGCGTTTTGAAAGGAGGGGAAAGCTGAATCCCCGTTTTGTTGGGCCGTTTGAGATTCTGGAGCGGATTGGCCCTGTAGCTTATCGCTTGGCGTTGCCTCCATCACTCTCGACAGTCCATGATGTGTTTCACGTTTCTATGTTGAGGAAGTACGTGCCAGATCCATCCCATGTAGTGGATTACGAGCCACTAGAGATTGATGAGAACTTGAGCTATGTCGAACAGCCCGTTGAGATACTGGCTAGAGAGGTGAAAACGTTGAGGAATAAGGAAATCCCTCTGGTTAAAGTCTTATGGCGGAATCACCGGATAGAAGAGGCTACGTGGGAGCGAGAAGATGACATGAGGTCCCGTTATCCCGAACTGTTCGAAGGAGAAGAAGGAAACCCTAAAACGCGCGAGCCCCCTCCATTTTCGTTTTCTCTCCCTCGCGCCGCCGCCGCTCCTCCTCCTCCTTCTTCTTCTTCCGTCATCGCAACCCCATCGTTTTCTTTCTTTTCTCTTTTCCCTTCCGTTCGCGCACATCTCCGTCTCCGTCTCCTGTTCCGCCTCCAGCGTCGTCAGCTTCATCGTGTTCGTCCGCCGCGGCCTCCCCATCCATTTCGGACCTCCTCTCGGCTTCAAATCGTCCTCCGCCGTCAAGCCGTCGTCCTCCGCCGCGTGAAAGCAGAACCAGCTGTCGGATTCCACCCAGCCGCGACTCACCCCGTCGTAGAACGCCTCCCAGCTGTCGTTCGTCACGGTCGTCGGACGCCGGAGAGCCATCGTTCGTGTTGCCCGTTTTCCGCTGCAAAAACCCGACCCGGTTCCAAGCTGACCCGACCCGAAACCGCTTCCAGTCCGAGCCGAGTTGATCTGTTGAGCGTGGATTCAATCGAGAGGCATAACCGAGTATCAGGTAAGGGTTTTCCTACTACTGGACCCCGAGTCCAGGCTGAAAACTATGTAGTAAACACCGGTCTGGATGTGGTTCATGGAATTTGGACGGGGATGGACCGTGAGTCCGGTTTTGGTTGGATCCCTCTCATTTATATGCAATATGAATTCATTCATGTCTCCCTCCAAAACTCAAGAGTTACAGTGACGGTGGACGGAGACAACCCCAACCGACAGAGAGACGACAAACTCGCGAACGGCAGCCATGAAAAGTTTTGGCTTTTAAAATCCACTACAAATCAAAAGCAAAGCCACCTTGCTTTGGTTATTGGTCTATACAAAGAAAATACTTAA

Coding sequence (CDS)

ATGGATTTCATTACCGGGCTACCGAGAACTCTGAGGGGATTTACAGTGATCTGGGTTGTGGTGGACAGACTTACTAAATCAGCGCACTTTGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGTTGTACATGTCTGAGATAGTGAGATTGCACGGAGTGCCAGTGTCGATTGTTTCTGACAGAGATGCCCGTTTCACTTCCAAATTTTGGAAGGGTTTGCAGACTGCTATGGGCACGAGATTGGACTTTAGTACGGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAGGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTACATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCGTTTGAGGCCCTGTACGGCAAATGTTGTAGATCCCCGGTTTGCTGGGATGAGGTAGGTGAGCAGAGATTGATGGGTCCTGAGTTAGTTCAGTCTACTAACGAAGCGATTCAGAAGATTAGATCACGCATGCATACCGCTCAGAGTAGACAGAAGAGTTATGCAGATGTGAGGCGGAAGGATCTTGAGTTTGAGGTAGGGGATAAGGTGTTCTTAAAGGTAGCACCTATGAGAGGTGTCGTGCGTTTTGAAAGGAGGGGAAAGCTGAATCCCCGTTTTGTTGGGCCGTTTGAGATTCTGGAGCGGATTGGCCCTGTAGCTTATCGCTTGGCGTTGCCTCCATCACTCTCGACAGTCCATGATGTGTTTCACGTTTCTATGTTGAGGAAGTACGTGCCAGATCCATCCCATGTAGTGGATTACGAGCCACTAGAGATTGATGAGAACTTGAGCTATGTCGAACAGCCCGTTGAGATACTGGCTAGAGAGGTGAAAACGTTGAGGAATAAGGAAATCCCTCTGGTTAAAGTCTTATGGCGGAATCACCGGATAGAAGAGGCTACGTGGGAGCGAGAAGATGACATGAGGTCCCGTTATCCCGAACTGTTCGAAGGAGAAGAAGGAAACCCTAAAACGCGCGAGCCCCCTCCATTTTCGTTTTCTCTCCCTCGCGCCGCCGCCGCTCCTCCTCCTCCTTCTTCTTCTTCCGTCATCGCAACCCCATCGTTTTCTTTCTTTTCTCTTTTCCCTTCCGTTCGCGCACATCTCCGTCTCCGTCTCCTGTTCCGCCTCCAGCGTCGTCAGCTTCATCGTGTTCGTCCGCCGCGGCCTCCCCATCCATTTCGGACCTCCTCTCGGCTTCAAATCGTCCTCCGCCGTCAAGCCGTCGTCCTCCGCCGCGTGAAAGCAGAACCAGCTGTCGGATTCCACCCAGCCGCGACTCACCCCGTCGTAGAACGCCTCCCAGCTGTCGTTCGTCACGGTCGTCGGACGCCGGAGAGCCATCGTTCGTGTTGCCCGTTTTCCGCTGCAAAAACCCGACCCGGTTCCAAGCTGACCCGACCCGAAACCGCTTCCAGTCCGAGCCGAGTTGATCTGTTGAGCGTGGATTCAATCGAGAGGCATAACCGAGTATCAGGTAAGGGTTTTCCTACTACTGGACCCCGAGTCCAGGCTGAAAACTATGTAGTAAACACCGGTCTGGATGTGGTTCATGGAATTTGGACGGGGATGGACCGTGAGTCCGGTTTTGGTTGGATCCCTCTCATTTATATGCAATATGAATTCATTCATGTCTCCCTCCAAAACTCAAGAGTTACAGTGACGGTGGACGGAGACAACCCCAACCGACAGAGAGACGACAAACTCGCGAACGGCAGCCATGAAAAGTTTTGGCTTTTAAAATCCACTACAAATCAAAAGCAAAGCCACCTTGCTTTGGTTATTGGTCTATACAAAGAAAATACTTAA

Protein sequence

MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLNPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYVEQPVEILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFEGEEGNPKTREPPPFSFSLPRAAAAPPPPSSSSVIATPSFSFFSLFPSVRAHLRLRLLFRLQRRQLHRVRPPRPPHPFRTSSRLQIVLRRQAVVLRRVKAEPAVGFHPAATHPVVERLPAVVRHGRRTPESHRSCCPFSAAKTRPGSKLTRPETASSPSRVDLLSVDSIERHNRVSGKGFPTTGPRVQAENYVVNTGLDVVHGIWTGMDRESGFGWIPLIYMQYEFIHVSLQNSRVTVTVDGDNPNRQRDDKLANGSHEKFWLLKSTTNQKQSHLALVIGLYKENT

Homology

[Close]

BLAST of MELO.jh102828.1 vs. NCBI nr
Match: KAA0041424.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 689 bits (1778), Expect = 2.96e-245
Identity = 335/346 (96.82%), Postives = 344/346 (99.42%), Query Frame = 0


Query: 1   MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSI 60
           MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSI
Sbjct: 1   MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSI 60

Query: 61  VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW 120
           VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW
Sbjct: 61  VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW 120

Query: 121 DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNEAIQ 180
           DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNEA+Q
Sbjct: 121 DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNEAVQ 180

Query: 181 KIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLNPRFVGPFE 240
           KIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPM+GV+RFERRGKL+PRFVGPFE
Sbjct: 181 KIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFE 240

Query: 241 ILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYVEQPVE 300
           ILER+GPVAYRLALPPSLS VHDVFHVSMLRKYVPDPSHVVD EPLEIDENLSYVEQPVE
Sbjct: 241 ILERVGPVAYRLALPPSLSAVHDVFHVSMLRKYVPDPSHVVDCEPLEIDENLSYVEQPVE 300

Query: 301 ILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFE 346
           +LAREVKTLRNK+IPLVKVLWRNHR+EEATWEREDDMRSRYP+LFE
Sbjct: 301 VLAREVKTLRNKQIPLVKVLWRNHRVEEATWEREDDMRSRYPDLFE 346

[Close]

BLAST of MELO.jh102828.1 vs. NCBI nr
Match: KAA0043401.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 690 bits (1780), Expect = 7.36e-245
Identity = 335/346 (96.82%), Postives = 344/346 (99.42%), Query Frame = 0


Query: 1   MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSI 60
           MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSI
Sbjct: 44  MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSI 103

Query: 61  VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW 120
           VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW
Sbjct: 104 VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW 163

Query: 121 DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNEAIQ 180
           DSHLHLMEFAYNNSYQATIGMAPFEALYG+CCRSPVCW EVGEQRLMGPELVQSTNEAIQ
Sbjct: 164 DSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQSTNEAIQ 223

Query: 181 KIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLNPRFVGPFE 240
           KIRSRMHTAQSRQKSYADVRRKDLEFE+GDKVFLKVAPM+GV+RFERRGKL+PRFVGPFE
Sbjct: 224 KIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFE 283

Query: 241 ILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYVEQPVE 300
           ILERIGPVAYRLALPPSLS VHDVFH+SMLRKYVPDPSHVVDYEPLEIDENLSYVEQPVE
Sbjct: 284 ILERIGPVAYRLALPPSLSAVHDVFHISMLRKYVPDPSHVVDYEPLEIDENLSYVEQPVE 343

Query: 301 ILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFE 346
           +LAREVKTLRNK+IPLVKVLWRNHR+EEATWEREDDMRSRYPELFE
Sbjct: 344 VLAREVKTLRNKQIPLVKVLWRNHRVEEATWEREDDMRSRYPELFE 389

[Close]

BLAST of MELO.jh102828.1 vs. NCBI nr
Match: KAA0056504.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 687 bits (1774), Expect = 1.20e-244
Identity = 336/346 (97.11%), Postives = 344/346 (99.42%), Query Frame = 0


Query: 1   MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSI 60
           MDFITGLPRTLRGFTVIWVVVDRLTKS +FVPGKSTYTASKWAQLYMSEIVRLHGVPVSI
Sbjct: 1   MDFITGLPRTLRGFTVIWVVVDRLTKSTYFVPGKSTYTASKWAQLYMSEIVRLHGVPVSI 60

Query: 61  VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW 120
           VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW
Sbjct: 61  VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW 120

Query: 121 DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNEAIQ 180
           DS+LHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCW EVGEQRLMGPELVQSTNEAIQ
Sbjct: 121 DSNLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQ 180

Query: 181 KIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLNPRFVGPFE 240
           KIRSRMHTAQSRQKSYADVRRKDLEFE+GDKVFLKVAPMRGV+RFERRGKL+PRFVGPFE
Sbjct: 181 KIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFE 240

Query: 241 ILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYVEQPVE 300
           ILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPL+IDENLSYVEQPVE
Sbjct: 241 ILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLKIDENLSYVEQPVE 300

Query: 301 ILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFE 346
           +LAREVKTLRNKEIPLVKVLWRNHR+EEATWEREDDMRSRYPELFE
Sbjct: 301 VLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFE 346

[Close]

BLAST of MELO.jh102828.1 vs. NCBI nr
Match: KAA0063371.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 686 bits (1769), Expect = 6.90e-244
Identity = 337/346 (97.40%), Postives = 343/346 (99.13%), Query Frame = 0


Query: 1   MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSI 60
           MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSI
Sbjct: 1   MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSI 60

Query: 61  VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW 120
           VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW
Sbjct: 61  VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW 120

Query: 121 DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNEAIQ 180
           DSHLHLMEFAYNNSYQATIGMAPFEAL GKCCRSPVCW EVGEQ+LMGPELVQSTNEAIQ
Sbjct: 121 DSHLHLMEFAYNNSYQATIGMAPFEALDGKCCRSPVCWGEVGEQKLMGPELVQSTNEAIQ 180

Query: 181 KIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLNPRFVGPFE 240
           KIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPM+GV+RFERRGKL+PRFVGPFE
Sbjct: 181 KIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFE 240

Query: 241 ILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYVEQPVE 300
           ILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYV+QPVE
Sbjct: 241 ILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYVKQPVE 300

Query: 301 ILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFE 346
           ILAREVKTLRNKEIPLVKVLWRNH +EEATWEREDDMRSRYPELFE
Sbjct: 301 ILAREVKTLRNKEIPLVKVLWRNHWVEEATWEREDDMRSRYPELFE 346

[Close]

BLAST of MELO.jh102828.1 vs. NCBI nr
Match: KAA0060848.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 693 bits (1789), Expect = 1.21e-243
Identity = 339/347 (97.69%), Postives = 344/347 (99.14%), Query Frame = 0


Query: 1   MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSI 60
           MDFI GLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSI
Sbjct: 206 MDFIIGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSI 265

Query: 61  VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW 120
           VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW
Sbjct: 266 VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW 325

Query: 121 DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNEAIQ 180
           DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNEAIQ
Sbjct: 326 DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNEAIQ 385

Query: 181 KIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLNPRFVGPFE 240
           KIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGV+RFE+RGKL+PRFVGPFE
Sbjct: 386 KIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPFE 445

Query: 241 ILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYVEQPVE 300
           ILERIGPVAYRLALPPSL+T HDVFHVSMLRKYVPDPSHVVDYEPLEIDEN+SY EQPVE
Sbjct: 446 ILERIGPVAYRLALPPSLTTAHDVFHVSMLRKYVPDPSHVVDYEPLEIDENMSYTEQPVE 505

Query: 301 ILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFEG 347
           ILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFEG
Sbjct: 506 ILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFEG 552

[Close]

BLAST of MELO.jh102828.1 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 8.9e-39
Identity = 97/277 (35.02%), Postives = 147/277 (53.07%), Query Frame = 0


Query: 1    MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSI 60
            MDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G P  I
Sbjct: 989  MDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEI 1048

Query: 61   VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW 120
            ++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W
Sbjct: 1049 IADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTW 1108

Query: 121  DSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWDEVGEQRLMGPELVQSTNEAI 180
              H+ L++ +YNN+  +   M PFE ++      SP+      ++     E  Q T +  
Sbjct: 1109 VDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKT---DENSQETIQVF 1168

Query: 181  QKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVVRF-ERRGKLNPRFVG 240
            Q ++  ++T   + K Y D++ +++ EF+ GD V +K    R    F  +  KL P F G
Sbjct: 1169 QTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK----RTKTGFLHKSNKLAPSFAG 1228

Query: 241  PFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY 274
            PF +L++ GP  Y L LP S+  +    FHVS L KY
Sbjct: 1229 PFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of MELO.jh102828.1 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 8.9e-39
Identity = 97/277 (35.02%), Postives = 147/277 (53.07%), Query Frame = 0


Query: 1    MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSI 60
            MDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G P  I
Sbjct: 989  MDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEI 1048

Query: 61   VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW 120
            ++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W
Sbjct: 1049 IADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTW 1108

Query: 121  DSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWDEVGEQRLMGPELVQSTNEAI 180
              H+ L++ +YNN+  +   M PFE ++      SP+      ++     E  Q T +  
Sbjct: 1109 VDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKT---DENSQETIQVF 1168

Query: 181  QKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVVRF-ERRGKLNPRFVG 240
            Q ++  ++T   + K Y D++ +++ EF+ GD V +K    R    F  +  KL P F G
Sbjct: 1169 QTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK----RTKTGFLHKSNKLAPSFAG 1228

Query: 241  PFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY 274
            PF +L++ GP  Y L LP S+  +    FHVS L KY
Sbjct: 1229 PFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of MELO.jh102828.1 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 8.9e-39
Identity = 97/277 (35.02%), Postives = 147/277 (53.07%), Query Frame = 0


Query: 1    MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSI 60
            MDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G P  I
Sbjct: 989  MDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEI 1048

Query: 61   VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW 120
            ++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W
Sbjct: 1049 IADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTW 1108

Query: 121  DSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWDEVGEQRLMGPELVQSTNEAI 180
              H+ L++ +YNN+  +   M PFE ++      SP+      ++     E  Q T +  
Sbjct: 1109 VDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKT---DENSQETIQVF 1168

Query: 181  QKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVVRF-ERRGKLNPRFVG 240
            Q ++  ++T   + K Y D++ +++ EF+ GD V +K    R    F  +  KL P F G
Sbjct: 1169 QTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK----RTKTGFLHKSNKLAPSFAG 1228

Query: 241  PFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY 274
            PF +L++ GP  Y L LP S+  +    FHVS L KY
Sbjct: 1229 PFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of MELO.jh102828.1 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 8.9e-39
Identity = 97/277 (35.02%), Postives = 147/277 (53.07%), Query Frame = 0


Query: 1    MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSI 60
            MDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G P  I
Sbjct: 989  MDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEI 1048

Query: 61   VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW 120
            ++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W
Sbjct: 1049 IADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTW 1108

Query: 121  DSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWDEVGEQRLMGPELVQSTNEAI 180
              H+ L++ +YNN+  +   M PFE ++      SP+      ++     E  Q T +  
Sbjct: 1109 VDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKT---DENSQETIQVF 1168

Query: 181  QKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVVRF-ERRGKLNPRFVG 240
            Q ++  ++T   + K Y D++ +++ EF+ GD V +K    R    F  +  KL P F G
Sbjct: 1169 QTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK----RTKTGFLHKSNKLAPSFAG 1228

Query: 241  PFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY 274
            PF +L++ GP  Y L LP S+  +    FHVS L KY
Sbjct: 1229 PFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of MELO.jh102828.1 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 8.9e-39
Identity = 97/277 (35.02%), Postives = 147/277 (53.07%), Query Frame = 0


Query: 1    MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSI 60
            MDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G P  I
Sbjct: 989  MDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEI 1048

Query: 61   VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW 120
            ++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W
Sbjct: 1049 IADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTW 1108

Query: 121  DSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWDEVGEQRLMGPELVQSTNEAI 180
              H+ L++ +YNN+  +   M PFE ++      SP+      ++     E  Q T +  
Sbjct: 1109 VDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKT---DENSQETIQVF 1168

Query: 181  QKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVVRF-ERRGKLNPRFVG 240
            Q ++  ++T   + K Y D++ +++ EF+ GD V +K    R    F  +  KL P F G
Sbjct: 1169 QTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK----RTKTGFLHKSNKLAPSFAG 1228

Query: 241  PFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY 274
            PF +L++ GP  Y L LP S+  +    FHVS L KY
Sbjct: 1229 PFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of MELO.jh102828.1 vs. ExPASy TrEMBL
Match: A0A5A7TDB5 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41502G00010 PE=4 SV=1)

HSP 1 Score: 689 bits (1778), Expect = 1.43e-245
Identity = 335/346 (96.82%), Postives = 344/346 (99.42%), Query Frame = 0


Query: 1   MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSI 60
           MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSI
Sbjct: 1   MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSI 60

Query: 61  VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW 120
           VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW
Sbjct: 61  VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW 120

Query: 121 DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNEAIQ 180
           DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNEA+Q
Sbjct: 121 DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNEAVQ 180

Query: 181 KIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLNPRFVGPFE 240
           KIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPM+GV+RFERRGKL+PRFVGPFE
Sbjct: 181 KIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFE 240

Query: 241 ILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYVEQPVE 300
           ILER+GPVAYRLALPPSLS VHDVFHVSMLRKYVPDPSHVVD EPLEIDENLSYVEQPVE
Sbjct: 241 ILERVGPVAYRLALPPSLSAVHDVFHVSMLRKYVPDPSHVVDCEPLEIDENLSYVEQPVE 300

Query: 301 ILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFE 346
           +LAREVKTLRNK+IPLVKVLWRNHR+EEATWEREDDMRSRYP+LFE
Sbjct: 301 VLAREVKTLRNKQIPLVKVLWRNHRVEEATWEREDDMRSRYPDLFE 346

[Close]

BLAST of MELO.jh102828.1 vs. ExPASy TrEMBL
Match: A0A5A7TPA9 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold18932G00010 PE=4 SV=1)

HSP 1 Score: 690 bits (1780), Expect = 3.56e-245
Identity = 335/346 (96.82%), Postives = 344/346 (99.42%), Query Frame = 0


Query: 1   MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSI 60
           MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSI
Sbjct: 44  MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSI 103

Query: 61  VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW 120
           VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW
Sbjct: 104 VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW 163

Query: 121 DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNEAIQ 180
           DSHLHLMEFAYNNSYQATIGMAPFEALYG+CCRSPVCW EVGEQRLMGPELVQSTNEAIQ
Sbjct: 164 DSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQSTNEAIQ 223

Query: 181 KIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLNPRFVGPFE 240
           KIRSRMHTAQSRQKSYADVRRKDLEFE+GDKVFLKVAPM+GV+RFERRGKL+PRFVGPFE
Sbjct: 224 KIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFE 283

Query: 241 ILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYVEQPVE 300
           ILERIGPVAYRLALPPSLS VHDVFH+SMLRKYVPDPSHVVDYEPLEIDENLSYVEQPVE
Sbjct: 284 ILERIGPVAYRLALPPSLSAVHDVFHISMLRKYVPDPSHVVDYEPLEIDENLSYVEQPVE 343

Query: 301 ILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFE 346
           +LAREVKTLRNK+IPLVKVLWRNHR+EEATWEREDDMRSRYPELFE
Sbjct: 344 VLAREVKTLRNKQIPLVKVLWRNHRVEEATWEREDDMRSRYPELFE 389

[Close]

BLAST of MELO.jh102828.1 vs. ExPASy TrEMBL
Match: A0A5A7UMT8 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold881G00010 PE=4 SV=1)

HSP 1 Score: 687 bits (1774), Expect = 5.81e-245
Identity = 336/346 (97.11%), Postives = 344/346 (99.42%), Query Frame = 0


Query: 1   MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSI 60
           MDFITGLPRTLRGFTVIWVVVDRLTKS +FVPGKSTYTASKWAQLYMSEIVRLHGVPVSI
Sbjct: 1   MDFITGLPRTLRGFTVIWVVVDRLTKSTYFVPGKSTYTASKWAQLYMSEIVRLHGVPVSI 60

Query: 61  VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW 120
           VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW
Sbjct: 61  VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW 120

Query: 121 DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNEAIQ 180
           DS+LHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCW EVGEQRLMGPELVQSTNEAIQ
Sbjct: 121 DSNLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQ 180

Query: 181 KIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLNPRFVGPFE 240
           KIRSRMHTAQSRQKSYADVRRKDLEFE+GDKVFLKVAPMRGV+RFERRGKL+PRFVGPFE
Sbjct: 181 KIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFE 240

Query: 241 ILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYVEQPVE 300
           ILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPL+IDENLSYVEQPVE
Sbjct: 241 ILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLKIDENLSYVEQPVE 300

Query: 301 ILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFE 346
           +LAREVKTLRNKEIPLVKVLWRNHR+EEATWEREDDMRSRYPELFE
Sbjct: 301 VLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFE 346

[Close]

BLAST of MELO.jh102828.1 vs. ExPASy TrEMBL
Match: A0A5A7VCD0 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold3591G00010 PE=4 SV=1)

HSP 1 Score: 686 bits (1769), Expect = 3.34e-244
Identity = 337/346 (97.40%), Postives = 343/346 (99.13%), Query Frame = 0


Query: 1   MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSI 60
           MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSI
Sbjct: 1   MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSI 60

Query: 61  VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW 120
           VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW
Sbjct: 61  VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW 120

Query: 121 DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNEAIQ 180
           DSHLHLMEFAYNNSYQATIGMAPFEAL GKCCRSPVCW EVGEQ+LMGPELVQSTNEAIQ
Sbjct: 121 DSHLHLMEFAYNNSYQATIGMAPFEALDGKCCRSPVCWGEVGEQKLMGPELVQSTNEAIQ 180

Query: 181 KIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLNPRFVGPFE 240
           KIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPM+GV+RFERRGKL+PRFVGPFE
Sbjct: 181 KIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFE 240

Query: 241 ILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYVEQPVE 300
           ILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYV+QPVE
Sbjct: 241 ILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYVKQPVE 300

Query: 301 ILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFE 346
           ILAREVKTLRNKEIPLVKVLWRNH +EEATWEREDDMRSRYPELFE
Sbjct: 301 ILAREVKTLRNKEIPLVKVLWRNHWVEEATWEREDDMRSRYPELFE 346

[Close]

BLAST of MELO.jh102828.1 vs. ExPASy TrEMBL
Match: A0A5A7UZZ4 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold137G00810 PE=4 SV=1)

HSP 1 Score: 693 bits (1789), Expect = 5.85e-244
Identity = 339/347 (97.69%), Postives = 344/347 (99.14%), Query Frame = 0


Query: 1   MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSI 60
           MDFI GLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSI
Sbjct: 206 MDFIIGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSI 265

Query: 61  VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW 120
           VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW
Sbjct: 266 VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW 325

Query: 121 DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNEAIQ 180
           DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNEAIQ
Sbjct: 326 DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNEAIQ 385

Query: 181 KIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLNPRFVGPFE 240
           KIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGV+RFE+RGKL+PRFVGPFE
Sbjct: 386 KIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPFE 445

Query: 241 ILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYVEQPVE 300
           ILERIGPVAYRLALPPSL+T HDVFHVSMLRKYVPDPSHVVDYEPLEIDEN+SY EQPVE
Sbjct: 446 ILERIGPVAYRLALPPSLTTAHDVFHVSMLRKYVPDPSHVVDYEPLEIDENMSYTEQPVE 505

Query: 301 ILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFEG 347
           ILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFEG
Sbjct: 506 ILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFEG 552

The following BLAST results are available for this feature:

BLAST of MELO.jh102828.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0041424.1	2.96e-245	96.82	pol protein [Cucumis melo var. makuwa]	[more]
KAA0043401.1	7.36e-245	96.82	pol protein [Cucumis melo var. makuwa]	[more]
KAA0056504.1	1.20e-244	97.11	pol protein [Cucumis melo var. makuwa]	[more]
KAA0063371.1	6.90e-244	97.40	pol protein [Cucumis melo var. makuwa]	[more]
KAA0060848.1	1.21e-243	97.69	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of MELO.jh102828.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	8.9e-39	35.02	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	8.9e-39	35.02	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	8.9e-39	35.02	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	8.9e-39	35.02	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	8.9e-39	35.02	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of MELO.jh102828.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TDB5	1.43e-245	96.82	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41502G00010 ...	[more]
A0A5A7TPA9	3.56e-245	96.82	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold18932G00010 ...	[more]
A0A5A7UMT8	5.81e-245	97.11	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold881G00010 PE...	[more]
A0A5A7VCD0	3.34e-244	97.40	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold3591G00010 P...	[more]
A0A5A7UZZ4	5.85e-244	97.69	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold137G00810 PE...	[more]

BLAST of MELO.jh102828.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 1..193 e-value: 7.7E-43 score: 148.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 470..505
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 343..375
None	No IPR available	PANTHER	PTHR46148	FAMILY NOT NAMED	coord: 105..341
None	No IPR available	PANTHER	PTHR46148:SF18	IPP TRANSFERASE	coord: 105..341
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 1..151 score: 18.277109
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 1..148
IPR016197	Chromo-like domain superfamily	SUPERFAMILY	54160	Chromo domain-like	coord: 259..341

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO.jh102828.1.t1	MELO.jh102828.1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding