MELO.jh102622.1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh102622.1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Photosystem II CP47 reaction center protein
Location	chr11: 6968553 .. 6969592 (-)
RNA-Seq Expression	MELO.jh102622.1
Synteny	MELO.jh102622.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTCGTTTAGGAATAACCAATTCATGGGGGGGTTGGAGTATCACAGGAGGGACTATAACGAATCCGGGTATTTGGAGTTACGAAGGTGTGGCCGGAGCACATATTGTGTTTTCTGGATTGTGCTTCTTAGCAGCTATCTGGCATTGGGTGTATTGGGATCTAGAAATATTTTGTGATGAACGTACAGGAAAACCTTCTTTGGATTTGCCGAAGATTTTTGGAATTCATTTATTTCTCTCAGGGTTGGGTTGCTTTGGTTTTGGTGCATTTCATGTAACCGGATTGTATGGTCCGGGAATATGGGTATCCGATCCTTATGGATTAACCGGAAGGGTACAAGCCGTAAATCCTGCGTGGGGTGTCGAAGGGTTTGATCCTTTTGTTCCGGGCGGAATAGCCTCGCATCATATTGCAGCAGGTACATTGGGCATATTAGCGGGCCTATTCCATCTTAGTGTTCGTATATATCGTTTTATTTTAGTTTTTTAACTTTTAAAAACGTTTATTTTAGTTCCTATACTTTTAAAAAGTACATATTTTAGTCTCTGTTGTTAAAATTATGTTAAAATGATTAGGTTATTTCTATATTTGGATGACTAGATTGCTAAATAAAATAATTACTCTCAATAATTTAGGATTTCACTTTCTCAACTCGTATGGTAGATGTAATTCGTCTATATGTGATTCGTTGAGGTGCCTTTTTCTTTTTCTTCCTCTTAGTTCTTTCTTCATTTTTTAGAGGTTTTGCGATTAATCGTAGAAATATTTATCTGCAATTTCGTAGAGTTTATTTTATACATATGTTTGTACTTATTTTGTTTTTCTAGTTTAATTTATCTTGTCGTGGATGTTAACACAAATATGTGAGTTTTATTTTTATTTATTTTTTATTCTACTCAATGTCTGATTTGCTTCAAGATTTGAATTTGAAAAAAATAAATAAGTAAAGGGTGGGGAGTCGAGGGGATGTTAAAGATTTAAGTTTTGGAGAATAAAAAAGAACAAAATTAGTTTTTAATTTGGGTTTATTTTATTAA

mRNA sequence

ATGACTCGTTTAGGAATAACCAATTCATGGGGGGGTTGGAGTATCACAGGAGGGACTATAACGAATCCGGGTATTTGGAGTTACGAAGGTGTGGCCGGAGCACATATTGTGTTTTCTGGATTGTGCTTCTTAGCAGCTATCTGGCATTGGGTGTATTGGGATCTAGAAATATTTTGTGATGAACGTACAGGAAAACCTTCTTTGGATTTGCCGAAGATTTTTGGAATTCATTTATTTCTCTCAGGGTTGGGTTGCTTTGGTTTTGGTGCATTTCATGTAACCGGATTGTATGGTCCGGGAATATGGGTATCCGATCCTTATGGATTAACCGGAAGGGTACAAGCCGTAAATCCTGCGTGGGGTGTCGAAGGGTTTGATCCTTTTGTTCCGGGCGGAATAGCCTCGCATCATATTGCAGCAGTTTTTAATTTGGGTTTATTTTATTAA

Coding sequence (CDS)

ATGACTCGTTTAGGAATAACCAATTCATGGGGGGGTTGGAGTATCACAGGAGGGACTATAACGAATCCGGGTATTTGGAGTTACGAAGGTGTGGCCGGAGCACATATTGTGTTTTCTGGATTGTGCTTCTTAGCAGCTATCTGGCATTGGGTGTATTGGGATCTAGAAATATTTTGTGATGAACGTACAGGAAAACCTTCTTTGGATTTGCCGAAGATTTTTGGAATTCATTTATTTCTCTCAGGGTTGGGTTGCTTTGGTTTTGGTGCATTTCATGTAACCGGATTGTATGGTCCGGGAATATGGGTATCCGATCCTTATGGATTAACCGGAAGGGTACAAGCCGTAAATCCTGCGTGGGGTGTCGAAGGGTTTGATCCTTTTGTTCCGGGCGGAATAGCCTCGCATCATATTGCAGCAGTTTTTAATTTGGGTTTATTTTATTAA

Protein sequence

MTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIASHHIAAVFNLGLFY

Homology

[Close]

BLAST of MELO.jh102622.1 vs. NCBI nr
Match: OMP13338.1 (Photosystem antenna protein-like protein [Corchorus olitorius])

HSP 1 Score: 301 bits (772), Expect = 3.59e-103
Identity = 136/140 (97.14%), Postives = 138/140 (98.57%), Query Frame = 0


Query: 1   MTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCD 60
           MTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCD
Sbjct: 12  MTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCD 71

Query: 61  ERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAW 120
           ERTGKPSLDLPKIFGIHLFLSG+ CFGFGAFHVTGLYGPGIWVSDPYGLTG+VQ VNPAW
Sbjct: 72  ERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQPVNPAW 131

Query: 121 GVEGFDPFVPGGIASHHIAA 140
           GVEGFDPFVPGGIASHHIAA
Sbjct: 132 GVEGFDPFVPGGIASHHIAA 151

[Close]

BLAST of MELO.jh102622.1 vs. NCBI nr
Match: QGA85728.1 (photosystem II CP47 chlorophyll apoprotein, partial [Guilfoylia monostylis])

HSP 1 Score: 303 bits (777), Expect = 6.07e-103
Identity = 137/140 (97.86%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 1   MTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCD 60
           MTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCD
Sbjct: 66  MTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCD 125

Query: 61  ERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAW 120
           ERTGKPSLDLPKIFGIHLFLSG+ CFGFGAFHVTGLYGPGIWVSDPYGLTGRVQ+VNPAW
Sbjct: 126 ERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGRVQSVNPAW 185

Query: 121 GVEGFDPFVPGGIASHHIAA 140
           GVEGFDPFVPGGIASHHIAA
Sbjct: 186 GVEGFDPFVPGGIASHHIAA 205

[Close]

BLAST of MELO.jh102622.1 vs. NCBI nr
Match: KAB2044902.1 (hypothetical protein ES319_D01G123000v1, partial [Gossypium barbadense])

HSP 1 Score: 301 bits (772), Expect = 3.63e-102
Identity = 136/140 (97.14%), Postives = 138/140 (98.57%), Query Frame = 0


Query: 1   MTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCD 60
           MTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCD
Sbjct: 66  MTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCD 125

Query: 61  ERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAW 120
           ERTGKPSLDLPKIFGIHLFLSG+ CFGFGAFHVTGLYGPGIWVSDPYGLTG+VQ VNPAW
Sbjct: 126 ERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQPVNPAW 185

Query: 121 GVEGFDPFVPGGIASHHIAA 140
           GVEGFDPFVPGGIASHHIAA
Sbjct: 186 GVEGFDPFVPGGIASHHIAA 205

[Close]

BLAST of MELO.jh102622.1 vs. NCBI nr
Match: OMP14028.1 (Photosystem antenna protein-like protein [Corchorus olitorius])

HSP 1 Score: 301 bits (772), Expect = 6.73e-102
Identity = 136/140 (97.14%), Postives = 138/140 (98.57%), Query Frame = 0


Query: 1   MTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCD 60
           MTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCD
Sbjct: 66  MTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCD 125

Query: 61  ERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAW 120
           ERTGKPSLDLPKIFGIHLFLSG+ CFGFGAFHVTGLYGPGIWVSDPYGLTG+VQ VNPAW
Sbjct: 126 ERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQPVNPAW 185

Query: 121 GVEGFDPFVPGGIASHHIAA 140
           GVEGFDPFVPGGIASHHIAA
Sbjct: 186 GVEGFDPFVPGGIASHHIAA 205

[Close]

BLAST of MELO.jh102622.1 vs. NCBI nr
Match: XP_038904488.1 (photosystem II CP47 reaction center protein-like [Benincasa hispida])

HSP 1 Score: 301 bits (770), Expect = 8.70e-102
Identity = 139/146 (95.21%), Postives = 140/146 (95.89%), Query Frame = 0


Query: 1   MTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCD 60
           MTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCD
Sbjct: 23  MTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCD 82

Query: 61  ERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAW 120
           ERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQ VNP W
Sbjct: 83  ERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQVVNPTW 142

Query: 121 GVEGFDPFVPGGIASHHIAAVFNLGL 146
           GVEGFDPFVPG IASHHIA V  LG+
Sbjct: 143 GVEGFDPFVPGRIASHHIA-VGTLGI 167

[Close]

BLAST of MELO.jh102622.1 vs. ExPASy Swiss-Prot
Match: Q09WZ1 (Photosystem II CP47 reaction center protein OS=Morus indica OX=248361 GN=psbB PE=3 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 1.2e-82
Identity = 138/140 (98.57%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 1   MTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCD 60
           MTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCD
Sbjct: 66  MTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCD 125

Query: 61  ERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAW 120
           ERTGKPSLDLPKIFGIHLFLSG+ CFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAW
Sbjct: 126 ERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAW 185

Query: 121 GVEGFDPFVPGGIASHHIAA 141
           GVEGFDPFVPGGIASHHIAA
Sbjct: 186 GVEGFDPFVPGGIASHHIAA 205

[Close]

BLAST of MELO.jh102622.1 vs. ExPASy Swiss-Prot
Match: Q0ZIZ3 (Photosystem II CP47 reaction center protein OS=Vitis vinifera OX=29760 GN=psbB PE=3 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 2.6e-82
Identity = 137/140 (97.86%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 1   MTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCD 60
           MTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCD
Sbjct: 66  MTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCD 125

Query: 61  ERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAW 120
           ERTGKPSLDLPKIFGIHLFLSGL CFGFGAFHVTGLYGPGIWVSDPYGLTG+VQ+VNPAW
Sbjct: 126 ERTGKPSLDLPKIFGIHLFLSGLACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQSVNPAW 185

Query: 121 GVEGFDPFVPGGIASHHIAA 141
           GVEGFDPFVPGGIASHHIAA
Sbjct: 186 GVEGFDPFVPGGIASHHIAA 205

[Close]

BLAST of MELO.jh102622.1 vs. ExPASy Swiss-Prot
Match: Q2QD63 (Photosystem II CP47 reaction center protein OS=Cucumis sativus OX=3659 GN=psbB PE=3 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 3.4e-82
Identity = 138/140 (98.57%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 1   MTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCD 60
           MTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHI+FSGLCFLAAIWHWVYWDLEIF D
Sbjct: 66  MTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHILFSGLCFLAAIWHWVYWDLEIFSD 125

Query: 61  ERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAW 120
           ERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAW
Sbjct: 126 ERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAW 185

Query: 121 GVEGFDPFVPGGIASHHIAA 141
           GVEGFDPFVPGGIASHHIAA
Sbjct: 186 GVEGFDPFVPGGIASHHIAA 205

[Close]

BLAST of MELO.jh102622.1 vs. ExPASy Swiss-Prot
Match: A6MM62 (Photosystem II CP47 reaction center protein OS=Buxus microphylla OX=153571 GN=psbB PE=3 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 5.8e-82
Identity = 136/140 (97.14%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 1   MTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCD 60
           MTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCD
Sbjct: 66  MTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCD 125

Query: 61  ERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAW 120
           ERTGKPSLDLPKIFGIHLFLSG+ CFGFGAFHVTGLYGPGIWVSDPYGLTG+VQ+VNPAW
Sbjct: 126 ERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQSVNPAW 185

Query: 121 GVEGFDPFVPGGIASHHIAA 141
           GVEGFDPFVPGGIASHHIAA
Sbjct: 186 GVEGFDPFVPGGIASHHIAA 205

[Close]

BLAST of MELO.jh102622.1 vs. ExPASy Swiss-Prot
Match: A7Y3H4 (Photosystem II CP47 reaction center protein OS=Ipomoea purpurea OX=4121 GN=psbB PE=3 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 5.8e-82
Identity = 136/140 (97.14%), Postives = 138/140 (98.57%), Query Frame = 0


Query: 1   MTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCD 60
           MTRLGITNSWGGWSITGGT+TNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCD
Sbjct: 66  MTRLGITNSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCD 125

Query: 61  ERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAW 120
           ERTGKPSLDLPKIFGIHLFLSGL CFGFGAFHVTGLYGPGIWVSDPYGLTG+VQ VNPAW
Sbjct: 126 ERTGKPSLDLPKIFGIHLFLSGLACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQPVNPAW 185

Query: 121 GVEGFDPFVPGGIASHHIAA 141
           GVEGFDPFVPGGIASHHIAA
Sbjct: 186 GVEGFDPFVPGGIASHHIAA 205

[Close]

BLAST of MELO.jh102622.1 vs. ExPASy TrEMBL
Match: A0A1R3L229 (Photosystem antenna protein-like protein OS=Corchorus olitorius OX=93759 GN=COLO4_01862 PE=4 SV=1)

HSP 1 Score: 301 bits (772), Expect = 1.74e-103
Identity = 136/140 (97.14%), Postives = 138/140 (98.57%), Query Frame = 0


Query: 1   MTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCD 60
           MTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCD
Sbjct: 12  MTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCD 71

Query: 61  ERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAW 120
           ERTGKPSLDLPKIFGIHLFLSG+ CFGFGAFHVTGLYGPGIWVSDPYGLTG+VQ VNPAW
Sbjct: 72  ERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQPVNPAW 131

Query: 121 GVEGFDPFVPGGIASHHIAA 140
           GVEGFDPFVPGGIASHHIAA
Sbjct: 132 GVEGFDPFVPGGIASHHIAA 151

[Close]

BLAST of MELO.jh102622.1 vs. ExPASy TrEMBL
Match: A0A5Q0UW50 (Photosystem II CP47 chlorophyll apoprotein (Fragment) OS=Guilfoylia monostylis OX=32253 GN=psbB PE=4 SV=1)

HSP 1 Score: 303 bits (777), Expect = 2.94e-103
Identity = 137/140 (97.86%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 1   MTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCD 60
           MTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCD
Sbjct: 66  MTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCD 125

Query: 61  ERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAW 120
           ERTGKPSLDLPKIFGIHLFLSG+ CFGFGAFHVTGLYGPGIWVSDPYGLTGRVQ+VNPAW
Sbjct: 126 ERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGRVQSVNPAW 185

Query: 121 GVEGFDPFVPGGIASHHIAA 140
           GVEGFDPFVPGGIASHHIAA
Sbjct: 186 GVEGFDPFVPGGIASHHIAA 205

[Close]

BLAST of MELO.jh102622.1 vs. ExPASy TrEMBL
Match: A0A5B7AXP8 (Putative PSII protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_030931 PE=4 SV=1)

HSP 1 Score: 302 bits (773), Expect = 9.08e-103
Identity = 135/140 (96.43%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 1   MTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCD 60
           MTRLGITNSWGGWSITGGT+TNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCD
Sbjct: 66  MTRLGITNSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCD 125

Query: 61  ERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAW 120
           ERTGKPSLDLPKIFGIHLFLSG+ CFGFGAFHVTGLYGPGIWVSDPYGLTG+VQ+VNPAW
Sbjct: 126 ERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQSVNPAW 185

Query: 121 GVEGFDPFVPGGIASHHIAA 140
           GVEGFDPFVPGGIASHHIAA
Sbjct: 186 GVEGFDPFVPGGIASHHIAA 205

[Close]

BLAST of MELO.jh102622.1 vs. ExPASy TrEMBL
Match: A0A5J5SMS9 (Uncharacterized protein (Fragment) OS=Gossypium barbadense OX=3634 GN=ES319_D01G123000v1 PE=4 SV=1)

HSP 1 Score: 301 bits (772), Expect = 1.76e-102
Identity = 136/140 (97.14%), Postives = 138/140 (98.57%), Query Frame = 0


Query: 1   MTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCD 60
           MTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCD
Sbjct: 66  MTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCD 125

Query: 61  ERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAW 120
           ERTGKPSLDLPKIFGIHLFLSG+ CFGFGAFHVTGLYGPGIWVSDPYGLTG+VQ VNPAW
Sbjct: 126 ERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQPVNPAW 185

Query: 121 GVEGFDPFVPGGIASHHIAA 140
           GVEGFDPFVPGGIASHHIAA
Sbjct: 186 GVEGFDPFVPGGIASHHIAA 205

[Close]

BLAST of MELO.jh102622.1 vs. ExPASy TrEMBL
Match: A0A1R3L418 (Photosystem antenna protein-like protein OS=Corchorus olitorius OX=93759 GN=COLO4_00402 PE=4 SV=1)

HSP 1 Score: 301 bits (772), Expect = 3.26e-102
Identity = 136/140 (97.14%), Postives = 138/140 (98.57%), Query Frame = 0


Query: 1   MTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCD 60
           MTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCD
Sbjct: 66  MTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCD 125

Query: 61  ERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAW 120
           ERTGKPSLDLPKIFGIHLFLSG+ CFGFGAFHVTGLYGPGIWVSDPYGLTG+VQ VNPAW
Sbjct: 126 ERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQPVNPAW 185

Query: 121 GVEGFDPFVPGGIASHHIAA 140
           GVEGFDPFVPGGIASHHIAA
Sbjct: 186 GVEGFDPFVPGGIASHHIAA 205

[Close]

BLAST of MELO.jh102622.1 vs. TAIR 10
Match: ATCG00680.1 (photosystem II reaction center protein B )

HSP 1 Score: 302.0 bits (772), Expect = 2.7e-82
Identity = 134/140 (95.71%), Postives = 138/140 (98.57%), Query Frame = 0


Query: 1   MTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCD 60
           MTRLGITNSWGGW+ITGGTITNPG+WSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCD
Sbjct: 66  MTRLGITNSWGGWNITGGTITNPGLWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCD 125

Query: 61  ERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAW 120
           ERTGKPSLDLPKIFGIHLFLSG+ CFGFGAFHVTGLYGPGIWVSDPYGLTG+VQ VNPAW
Sbjct: 126 ERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQPVNPAW 185

Query: 121 GVEGFDPFVPGGIASHHIAA 141
           GVEGFDPFVPGGIASHHIAA
Sbjct: 186 GVEGFDPFVPGGIASHHIAA 205

The following BLAST results are available for this feature:

BLAST of MELO.jh102622.1 vs. NCBI nr


Match Name	E-value	Identity	Description
OMP13338.1	3.59e-103	97.14	Photosystem antenna protein-like protein [Corchorus olitorius]	[more]
QGA85728.1	6.07e-103	97.86	photosystem II CP47 chlorophyll apoprotein, partial [Guilfoylia monostylis]	[more]
KAB2044902.1	3.63e-102	97.14	hypothetical protein ES319_D01G123000v1, partial [Gossypium barbadense]	[more]
OMP14028.1	6.73e-102	97.14	Photosystem antenna protein-like protein [Corchorus olitorius]	[more]
XP_038904488.1	8.70e-102	95.21	photosystem II CP47 reaction center protein-like [Benincasa hispida]	[more]

BLAST of MELO.jh102622.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q09WZ1	1.2e-82	98.57	Photosystem II CP47 reaction center protein OS=Morus indica OX=248361 GN=psbB PE...	[more]
Q0ZIZ3	2.6e-82	97.86	Photosystem II CP47 reaction center protein OS=Vitis vinifera OX=29760 GN=psbB P...	[more]
Q2QD63	3.4e-82	98.57	Photosystem II CP47 reaction center protein OS=Cucumis sativus OX=3659 GN=psbB P...	[more]
A6MM62	5.8e-82	97.14	Photosystem II CP47 reaction center protein OS=Buxus microphylla OX=153571 GN=ps...	[more]
A7Y3H4	5.8e-82	97.14	Photosystem II CP47 reaction center protein OS=Ipomoea purpurea OX=4121 GN=psbB ...	[more]

BLAST of MELO.jh102622.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1R3L229	1.74e-103	97.14	Photosystem antenna protein-like protein OS=Corchorus olitorius OX=93759 GN=COLO...	[more]
A0A5Q0UW50	2.94e-103	97.86	Photosystem II CP47 chlorophyll apoprotein (Fragment) OS=Guilfoylia monostylis O...	[more]
A0A5B7AXP8	9.08e-103	96.43	Putative PSII protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_030931 P...	[more]
A0A5J5SMS9	1.76e-102	97.14	Uncharacterized protein (Fragment) OS=Gossypium barbadense OX=3634 GN=ES319_D01G...	[more]
A0A1R3L418	3.26e-102	97.14	Photosystem antenna protein-like protein OS=Corchorus olitorius OX=93759 GN=COLO...	[more]

BLAST of MELO.jh102622.1 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00680.1	2.7e-82	95.71	photosystem II reaction center protein B	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000932	Photosystem antenna protein-like	PFAM	PF00421	PSII	coord: 1..141 e-value: 7.9E-65 score: 219.5
IPR000932	Photosystem antenna protein-like	PANTHER	PTHR33180	PHOTOSYSTEM II CP43 REACTION CENTER PROTEIN	coord: 1..141
None	No IPR available	PANTHER	PTHR33180:SF14	PHOTOSYSTEM II CP47 REACTION CENTER PROTEIN	coord: 1..141
IPR036001	Photosystem antenna protein-like superfamily	SUPERFAMILY	161077	Photosystem II antenna protein-like	coord: 1..142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO.jh102622.1.t1	MELO.jh102622.1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019684	photosynthesis, light reaction
biological_process	GO:0009767	photosynthetic electron transport chain
cellular_component	GO:0016020	membrane
cellular_component	GO:0009521	photosystem
molecular_function	GO:0016168	chlorophyll binding