MELO.jh102558.1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh102558.1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Retrotransposon protein
Location	chr10: 24243101 .. 24247507 (+)
RNA-Seq Expression	MELO.jh102558.1
Synteny	MELO.jh102558.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAACCGGATTTCGTTACGCCGAATCTCTCTCTACATCTCTCTCATCCGTCTCTCTCACTCCCGAAAGGACTTCTGTGTTCGTTGAAGCCGACGATTTCGTTGGCTCCAAACACGATTTCCTTTTTGGAATTGTGGGTTTTGGCTCCTTCAAACCTCCTTGTCGCTCGTGGTTCGATTATGCTATCCGGTCTTTCGCTTGGCAATAAGACAGATACTTCACTTTGCCATTGGAGCTTGGTAGGGAGGTATTGGAGTTTTCAATCCACTTTTTTTTTAAAAGCCGATGATGAGTTCGAATTTGTGTAATACTGAATTCTTTTGTAATGTATGTAGTTGTGTTATGTATTATTCCGGTCATGTCGTTGCTTTACCTATGTGTTCTGTATTCTTGCACCTATGTGTTCGTGTTATTGGTTAAATTTATCCGGCCATGTGTTCTGTATTCTTCCACCTATGTGTTCTGTGTTATTGGTTAAATATATCCGGCCATGTGTTCTGTATTCTTGCACCTATGTGTTCTGTGTTATTGGTTCAATTTCTCCGGCCATGTTACAATTCTGTTAGAATTGTGTTATGTCTTCTCTGTATTCTTACCAATTTTGTTACAATTGTTGTATTTTTTTACAATTCTTCTATTCTTAGCTCTCTGTACAATTGTTGTATGTCTTCTCTGTATTCTTTTGTTACATATTATTTCCTTCAAAAATTTGTTACATTTTTTTACAATTCTTCTATTCTTCTCTGTATTCTTTTGTTACATATTATCTCTCTGTATTGTTGTCATGTCTTTATTGCTTTAACCTTCCAGTGTTGTCTCTTCCATGTCTTTTTAGTGTATGGTTTTGACTTCACATTTGCTTACAAAATTTATTACAATCCTTCTATTCTGTATTCTTACATTGTTCATTTACTTTCATTTACAAAATTTATCTCTCTGTATTGTTACATTATTCATTTACTTTCAACTGGTCTTGGTTTCTGTCCAGTGTTGTCTCTTCTTCCTTTCTGTCCAGTGTTGTCTCTTCCATGTCTTTTTAGTGTATGGTTTTAGTATAGGTTTCAGTATATAGTCTTTGACTCTTTGGACTTTGCTATGCTTTATGTCAGTTGTAGCAGAGAGATAGGGCCTGTCTTTTATTGATAGATATGTTGCAGTTGGCTGTACTTTGGTCTTTATATTTTGGTTTACCTCCCTCCAAGTCCTCTCAACTTGCCCCATCTTTCCCCTATATATTACCACGTTTCCTCTTTTGATTCACTGCATTCTTGTCCCTCTTTGTATCCTCTCTGTGGTTTTAACTTATCTTTTGTAAGTCCTCTTCTTCTTTACTGTTACCATGTATCTTTTGTATCCTCTCTGTGGTTGTAACTTATCTTTTGTATTCATTACTGTTACCATATATGTTGTCTCTTCCATGTCTTTTTAGTGTATGGTTTTTGTGATATGTTTTGTATACCTTTCTGTCCTTTATTTTTTTTCTATAACTATGATGGAATTCCATTCATTATTTTGAATGGAATCAAAACTCTGAGGCTACTAAATTAAAAATAAACTTATTCTTTCGATTTCCCGATTCAATCTTCATTTGGAGTAACATTTTTCGTCATAAAAGGTATGTATATGTATTTCTTTTCATACGTTTTATATTGTGTGTTATCTACAAATAATAATCATCTTGTCTTATGTAGGACGTTGCGACGAACGAGTTGGAAAATATTTGAAGAGGTACTCTTGTGATAGCCGTTTGTAGGCTTTCGATAATGTATTTTATTTTTATTTATTTTTTTTCGGTTTTGTATAATTTTATAATTAACATTTTGTTTCGGTTTATAATATGTATATAGAACATTCGGTTTAATTTTGTTACATATTGTATCCTATTAATTTTCTGTTTTTTAACAATTTTTTTTCTATATAGTAATAATTTTTTTTTCTATTGGGTTTAATTTTTTTCTATGTAGTAATAACAATTTTTTTTCTATTAGGTTTAATTTTTTTCAACACACAATCAAAATACAAATTATATTTTAACCAAAAACTTATTAAGATGTTTTAGCCAACCATAGATAACAATAATTTTTTAAAAAAAGTTTCTTAAAGAAAAATGTATATCGGAAGAGAAAGAGGATTGATATTAATTTTCTGTTTTTTAACAATTTTTTTCTATATAGTAATAACAATTTTTTTTCTATTGGGTTTAATTTTTTTCTATTAGGTTTAATTTTTTTCAACACACAATCCAAATACAAATTATATTTTACCCAAAAACTTATTAAGATGTTTTAGCCAACCATAGATAACAATAATTTTTTAAAAAAAGTGAATTAAAAAAAATTAATTGCGGAAGAGAAAGAGGATTGATAATTAATTAGTTGCATATATTTCTTTGAACTCCACTCAATTATATATTATTAAATGAAAATGATATCAATTTATCAAAAAGAAGGAAAAAAAATAAATTTCTTTCCATGATAAATTTTCTTCGGTTTTTTTAAAAAAGAAACTTCTTCAAACTTCTTCTATAAATACTTGTTCAAACTTATTCAAAGTTCTTCATAAACTTCTTCATAAACTTTATTTTCTTTTTTTCTTATATTTTTCTTTTCTTTTAACCTTTTTTATGTTTAGTTTAAATTCTTTTGTTTTTATTTTCAACCAATTTTATTTCTATTTTTAAAATACTTATTTTAGAACTAAAATACATTATAAAATTTGTTGAAAATAAAATAAAATTATAAGTCATAATTCCAAATTACAAATTCCAAACTATTGTTCGGTTTTCAAAAAAAATAGTCTTAAAAATTAGGGGTGTTTTAAGAAAAACAAAACACAAAGGAAAATTAGTTAAAAGGAATTGAGTTGAAAAATATTAGGAAAATAGTATAAACTTCCATTTGTAACTTAATTAAATTTATGTATAATTTTCAATGTTCTCGTCACTCGTAATCTATTTTTTTTGTTCTATGTTTATGGTTTTACTAAATACGGATATTACTAAGTTTACATATCTTTTCATAATATATCGATATTGTACTAATTTAATTAGTACATGTTTTTTAAGGAACTTTACATACATTGTAATGGATGAACAAACACTTATTGGAGTCCTAACTGCATTCACGTTGGAGTCAGATTTTACTAACGTTGGAGCTACTAATGAACAACAATAAGCGTCTCCCACATACACCGCCCGATACACGCCATAGAATTAGGGAGCTTGCTTACTTTCGCATGATACACGAGTCAGATCTTGTGTGTCGGCAAAGCAAGCGGATGGATAGGCGAACATTCGCAATTCTATGCCATTTACTTAGAAATGTGGCTGGTCTTTCTTCAACTGAAATTGTCGATGTTGAGGAAATGGTAGCAATGTTCTTGCACGTCCTCGCTCATGACGTGAAGAACCGCGTCATACAACGAGAATTTGTACGGTCCGGTGAGACAGTATCTCGACATTTCAACATCGTATTGTTGGCTGTTCTTCGACTGTACGAGGAGTTGATAAAGAGACCTGTTCCGGTAACAAGTAACTGCAATGATCAACGTTGGAAGTGTTTCGAAGTGGGCATCATAGAAGTTGACTATAATTGACCTTTACGTACATCGCACTTAATTCAACATGTTTCTTTCAACCTGCAGAACTGCCTTGGCGCGTTAGATGGGACGTACACAAAGGTCAACGTCCCCGCAGGAGATCGACCTACTTTTTCAGAACGCGTAAGGGGAAAATTGCCACAAACGTTCTGGGGGTCTGTGACACGAAAGGGGATTTCGTTTATGTCCTCGCCGATTGGGAAGGATCCGCAGCAGACTCGCGGATCCTACGTGATGCGATTTCACGAGAAAATGGACTACAAGTGCCAAAGGGTATATCTTATTTATAATAAAACACCGTCGCTTCCTACTTACCTATTTAAAGTTCATAAACAAACCATTTAATAACAGGATATTATTATCTGTACGATGCGGGATATCCAAACGCGGAGGGGTTTCTCGCCCCGTACAGAGGCCAGCGGTACCATTTGCAAGAGTGGCGTGGTGCTGCAAATGCGCCAACAAATGCAAAGGAGTACTTCAACATGAAGCACTCCTCCGCAAGCAATGTTATTGAGCGCGCGTTCGGTGTTCTAAAGGGTCGTTGGACCATTCTTCGTGGAAAGTCGTACTATCCCCTGCAAGTCCAGTGTCGCACCATTCTAGCATGTACCTTGCTTCACAATTTGATCAACAGGGAAATGACATATTGCGACGACGTTGAGGACGAGGACGAGGGGGACTCCACGTATGCGACGACCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCAGTGGCGCGACGACCTAGCTGAATCGATGTTCACCGAATGGCAGTTGCGTAACGCTTAG

mRNA sequence

ATGAAACCGGATTTCGTTACGCCGAATCTCTCTCTACATCTCTCTCATCCGTCTCTCTCACTCCCGAAAGGACTTCTGTGTTCGTTGAAGCCGACGATTTCGTTGGCTCCAAACACGATTTCCTTTTTGGAATTGTGGGTTTTGGCTCCTTCAAACCTCCTTGTCGCTCGTGGTTCGATTATGCTATCCGGTCTTTCGCTTGGCAATAAGACAGATACTTCACTTTGCCATTGGAGCTTGATTTTACTAACGTTGGAGCTACTAATGAACAACAATAAGCGTCTCCCACATACACCGCCCGATACACGCCATAGAATTAGGGAGCTTGCTTACTTTCGCATGATACACGAGTCAGATCTTGTGTGTCGGCAAAGCAAGCGGATGGATAGGCGAACATTCGCAATTCTATGCCATTTACTTAGAAATGTGGCTGGTCTTTCTTCAACTGAAATTGTCGATGTTGAGGAAATGGTAGCAATGTTCTTGCACGTCCTCGCTCATGACGTGAAGAACCGCGTCATACAACGAGAATTTGTACGGTCCGGTGAGACAGTATCTCGACATTTCAACATCGTATTGTTGGCTGTTCTTCGACTGTACGAGGAGTTGATAAAGAGACCTGTTCCGGTAACAAAACTGCCTTGGCGCGTTAGATGGGACGTACACAAAGGTCAACGTCCCCGCAGGAGATCGACCTACTTTTTCAGAACGCGTAAGGGGAAAATTGCCACAAACGTTCTGGGGGTCTGTGACACGAAAGGGGATTTCGTTTATGTCCTCGCCGATTGGGAAGGATCCGCAGCAGACTCGCGGATCCTACGTGATGCGATTTCACGAGAAAATGGACTACAAGTGCCAAAGGGATATTATTATCTGTACGATGCGGGATATCCAAACGCGGAGGGGTTTCTCGCCCCGTACAGAGGCCAGCGGTACCATTTGCAAGAGTGGCGTGGTGCTGCAAATGCGCCAACAAATGCAAAGGAGTACTTCAACATGAAGCACTCCTCCGCAAGCAATGTTATTGAGCGCGCGTTCGGTGTTCTAAAGGGTCGTTGGACCATTCTTCGTGGAAAGTCGTACTATCCCCTGCAAGTCCAGTGTCGCACCATTCTAGCATGTACCTTGCTTCACAATTTGATCAACAGGGAAATGACATATTGCGACGACGTTGAGGACGAGGACGAGGGGGACTCCACGTATGCGACGACCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCAGTGGCGCGACGACCTAGCTGAATCGATGTTCACCGAATGGCAGTTGCGTAACGCTTAG

Coding sequence (CDS)

ATGAAACCGGATTTCGTTACGCCGAATCTCTCTCTACATCTCTCTCATCCGTCTCTCTCACTCCCGAAAGGACTTCTGTGTTCGTTGAAGCCGACGATTTCGTTGGCTCCAAACACGATTTCCTTTTTGGAATTGTGGGTTTTGGCTCCTTCAAACCTCCTTGTCGCTCGTGGTTCGATTATGCTATCCGGTCTTTCGCTTGGCAATAAGACAGATACTTCACTTTGCCATTGGAGCTTGATTTTACTAACGTTGGAGCTACTAATGAACAACAATAAGCGTCTCCCACATACACCGCCCGATACACGCCATAGAATTAGGGAGCTTGCTTACTTTCGCATGATACACGAGTCAGATCTTGTGTGTCGGCAAAGCAAGCGGATGGATAGGCGAACATTCGCAATTCTATGCCATTTACTTAGAAATGTGGCTGGTCTTTCTTCAACTGAAATTGTCGATGTTGAGGAAATGGTAGCAATGTTCTTGCACGTCCTCGCTCATGACGTGAAGAACCGCGTCATACAACGAGAATTTGTACGGTCCGGTGAGACAGTATCTCGACATTTCAACATCGTATTGTTGGCTGTTCTTCGACTGTACGAGGAGTTGATAAAGAGACCTGTTCCGGTAACAAAACTGCCTTGGCGCGTTAGATGGGACGTACACAAAGGTCAACGTCCCCGCAGGAGATCGACCTACTTTTTCAGAACGCGTAAGGGGAAAATTGCCACAAACGTTCTGGGGGTCTGTGACACGAAAGGGGATTTCGTTTATGTCCTCGCCGATTGGGAAGGATCCGCAGCAGACTCGCGGATCCTACGTGATGCGATTTCACGAGAAAATGGACTACAAGTGCCAAAGGGATATTATTATCTGTACGATGCGGGATATCCAAACGCGGAGGGGTTTCTCGCCCCGTACAGAGGCCAGCGGTACCATTTGCAAGAGTGGCGTGGTGCTGCAAATGCGCCAACAAATGCAAAGGAGTACTTCAACATGAAGCACTCCTCCGCAAGCAATGTTATTGAGCGCGCGTTCGGTGTTCTAAAGGGTCGTTGGACCATTCTTCGTGGAAAGTCGTACTATCCCCTGCAAGTCCAGTGTCGCACCATTCTAGCATGTACCTTGCTTCACAATTTGATCAACAGGGAAATGACATATTGCGACGACGTTGAGGACGAGGACGAGGGGGACTCCACGTATGCGACGACCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCAGTGGCGCGACGACCTAGCTGAATCGATGTTCACCGAATGGCAGTTGCGTAACGCTTAG

Protein sequence

MKPDFVTPNLSLHLSHPSLSLPKGLLCSLKPTISLAPNTISFLELWVLAPSNLLVARGSIMLSGLSLGNKTDTSLCHWSLILLTLELLMNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSKRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPVTKLPWRVRWDVHKGQRPRRRSTYFFRTRKGKIATNVLGVCDTKGDFVYVLADWEGSAADSRILRDAISRENGLQVPKGYYYLYDAGYPNAEGFLAPYRGQRYHLQEWRGAANAPTNAKEYFNMKHSSASNVIERAFGVLKGRWTILRGKSYYPLQVQCRTILACTLLHNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA

Homology

[Close]

BLAST of MELO.jh102558.1 vs. NCBI nr
Match: KAA0056561.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 632 bits (1629), Expect = 1.73e-225
Identity = 322/362 (88.95%), Postives = 325/362 (89.78%), Query Frame = 0


Query: 89  MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSKRMDRRTFAILCHLLRNVAGLSS 148
           MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQS RMDRRTFAILCHLLRNVAGLSS
Sbjct: 1   MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS 60

Query: 149 TEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV 208
           TEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV
Sbjct: 61  TEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV 120

Query: 209 PVTKLPWRVRWDVHKGQRPRRRSTYF-----------FRTRKGKIATNVLGVCDTKGDFV 268
           PVT      RW   +        TY            FRTRKG+IATNVLGVCDTKGDFV
Sbjct: 121 PVTSNCNDQRWKCFENCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFV 180

Query: 269 YVLADWEGSAADSRILRDAISRENGLQVPKGYYYLYDAGYPNAEGFLAPYRGQRYHLQEW 328
           YVLA WEGSAADSRILRDAISRENGLQVPKGYYYL DAGYPNAEGFLAPYRGQRYHLQEW
Sbjct: 181 YVLAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQEW 240

Query: 329 RGAANAPTNAKEYFNMKHSSASNVIERAFGVLKGRWTILRGKSYYPLQVQCRTILACTLL 388
           RGAANAPTNAKEYFNMKHSSA NVIERAFGVLKGRW ILRGKSYYPLQVQCRTILAC LL
Sbjct: 241 RGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACALL 300

Query: 389 HNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLR 439
           HNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLA SMFT+WQ R
Sbjct: 301 HNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAASMFTDWQFR 360

[Close]

BLAST of MELO.jh102558.1 vs. NCBI nr
Match: KAA0032767.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 630 bits (1626), Expect = 5.96e-225
Identity = 323/366 (88.25%), Postives = 327/366 (89.34%), Query Frame = 0


Query: 85  LELLMNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSKRMDRRTFAILCHLLRNVA 144
           LELLMNNNKRLPHTPPDTRHRIRELAYFRMIHESDLV RQS RMDRRTFAILCHLLRNVA
Sbjct: 2   LELLMNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVSRQSTRMDRRTFAILCHLLRNVA 61

Query: 145 GLSSTEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELI 204
           GLSSTEIVDVEEMVAMFLHVLAHD+KNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELI
Sbjct: 62  GLSSTEIVDVEEMVAMFLHVLAHDMKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELI 121

Query: 205 KRPVPVTKLPWRVRWDVHKGQRPRRRSTYF-----------FRTRKGKIATNVLGVCDTK 264
           KRPVPVT      RW   +        TY            FRTRKGKIATNVLGVCDTK
Sbjct: 122 KRPVPVTSNCNDQRWKCFENCLGALDGTYIKVNVPAGDRPTFRTRKGKIATNVLGVCDTK 181

Query: 265 GDFVYVLADWEGSAADSRILRDAISRENGLQVPKGYYYLYDAGYPNAEGFLAPYRGQRYH 324
           GDFVYVLA WEGSAADSRILRDAISRENGLQVPKGYYYL DAGYPNAEGFLAPYRGQRYH
Sbjct: 182 GDFVYVLAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYH 241

Query: 325 LQEWRGAANAPTNAKEYFNMKHSSASNVIERAFGVLKGRWTILRGKSYYPLQVQCRTILA 384
           LQEWRGAANAPTNAKEYFNMKHSSA NVIERAFGVLKGRW IL GKSYYPLQVQCRTILA
Sbjct: 242 LQEWRGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAILSGKSYYPLQVQCRTILA 301

Query: 385 CTLLHNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTE 439
           C LLHNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRD+LA SMFT+
Sbjct: 302 CALLHNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTD 361

[Close]

BLAST of MELO.jh102558.1 vs. NCBI nr
Match: KAA0031556.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0033743.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0036353.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0038064.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0038976.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 630 bits (1624), Expect = 9.98e-225
Identity = 321/362 (88.67%), Postives = 325/362 (89.78%), Query Frame = 0


Query: 89  MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSKRMDRRTFAILCHLLRNVAGLSS 148
           MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQS RMDRRTFAILCHLLRNVAGLSS
Sbjct: 1   MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS 60

Query: 149 TEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV 208
           TEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV
Sbjct: 61  TEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV 120

Query: 209 PVTKLPWRVRWDVHKGQRPRRRSTYF-----------FRTRKGKIATNVLGVCDTKGDFV 268
           PVT      RW   +        TY            FRTRKG+IATNVLGVCDTKGDFV
Sbjct: 121 PVTSNCNDQRWKCFENCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFV 180

Query: 269 YVLADWEGSAADSRILRDAISRENGLQVPKGYYYLYDAGYPNAEGFLAPYRGQRYHLQEW 328
           YVLA WEGSAADSRILRDAISRENGLQVPKGYYYL DAGYPNAEGFLAPYRGQRYHLQEW
Sbjct: 181 YVLAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQEW 240

Query: 329 RGAANAPTNAKEYFNMKHSSASNVIERAFGVLKGRWTILRGKSYYPLQVQCRTILACTLL 388
           RGAANAPTNAKEYFNMKHSSA NVIERAFGVLKGRW ILRGKSYYPLQVQCRTILAC LL
Sbjct: 241 RGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACALL 300

Query: 389 HNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLR 439
           HNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRD+LA SMFT+WQ R
Sbjct: 301 HNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFR 360

[Close]

BLAST of MELO.jh102558.1 vs. NCBI nr
Match: KAA0048383.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 629 bits (1623), Expect = 1.42e-224
Identity = 319/362 (88.12%), Postives = 324/362 (89.50%), Query Frame = 0


Query: 89  MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSKRMDRRTFAILCHLLRNVAGLSS 148
           MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQS RMDRRTFAILCHLLRNVAGLSS
Sbjct: 1   MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS 60

Query: 149 TEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV 208
           TEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLL +LRLYEELIKRPV
Sbjct: 61  TEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLVILRLYEELIKRPV 120

Query: 209 PVTKLPWRVRWDVHKGQRPRRRSTYF-----------FRTRKGKIATNVLGVCDTKGDFV 268
           PVT      RW   +        TY            FRTRKG+IATN+LGVCDTKGDFV
Sbjct: 121 PVTSNCNDQRWKCFENCLGTLDGTYIKVNVPAGDRPTFRTRKGEIATNILGVCDTKGDFV 180

Query: 269 YVLADWEGSAADSRILRDAISRENGLQVPKGYYYLYDAGYPNAEGFLAPYRGQRYHLQEW 328
           YVLA WEGSAADSRILRDAISRENGLQVPKGYYYL DAGYPNAEGFLAPYRGQRYHLQEW
Sbjct: 181 YVLAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQEW 240

Query: 329 RGAANAPTNAKEYFNMKHSSASNVIERAFGVLKGRWTILRGKSYYPLQVQCRTILACTLL 388
           RGAANAPTNAKEYFNMKHSSA NVIERAFGVLKGRW ILRGKSYYPLQVQCRTILAC LL
Sbjct: 241 RGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACALL 300

Query: 389 HNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLR 439
           HNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLA SMFT+WQ R
Sbjct: 301 HNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAASMFTDWQFR 360

[Close]

BLAST of MELO.jh102558.1 vs. NCBI nr
Match: KAA0056564.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 627 bits (1617), Expect = 1.16e-223
Identity = 319/362 (88.12%), Postives = 324/362 (89.50%), Query Frame = 0


Query: 89  MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSKRMDRRTFAILCHLLRNVAGLSS 148
           MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQS RMDRRTFAILCHLLRNVAGLSS
Sbjct: 1   MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS 60

Query: 149 TEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV 208
           TEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV
Sbjct: 61  TEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV 120

Query: 209 PVTKLPWRVRWDVHKGQRPRRRSTYF-----------FRTRKGKIATNVLGVCDTKGDFV 268
           PVT      RW   +        TY            FRTRKG+IATNVLGVCDTKGDFV
Sbjct: 121 PVTSNCNDQRWKCFENYLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFV 180

Query: 269 YVLADWEGSAADSRILRDAISRENGLQVPKGYYYLYDAGYPNAEGFLAPYRGQRYHLQEW 328
           YVLA WEGSAADSRILRDAI RENGLQVPKGYYYL DAGYPNAEGFLAPYRGQRYHLQEW
Sbjct: 181 YVLAGWEGSAADSRILRDAILRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQEW 240

Query: 329 RGAANAPTNAKEYFNMKHSSASNVIERAFGVLKGRWTILRGKSYYPLQVQCRTILACTLL 388
           RGAANAPTNAKEYFNMKHSSA NVIERA+GVLKGRW ILRGKSYYPLQVQCRTILAC LL
Sbjct: 241 RGAANAPTNAKEYFNMKHSSARNVIERAYGVLKGRWAILRGKSYYPLQVQCRTILACALL 300

Query: 389 HNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLR 439
           HNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRD+LA SMFT+WQ R
Sbjct: 301 HNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFR 360

[Close]

BLAST of MELO.jh102558.1 vs. ExPASy TrEMBL
Match: A0A5A7UST8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G00660 PE=3 SV=1)

HSP 1 Score: 632 bits (1629), Expect = 8.37e-226
Identity = 322/362 (88.95%), Postives = 325/362 (89.78%), Query Frame = 0


Query: 89  MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSKRMDRRTFAILCHLLRNVAGLSS 148
           MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQS RMDRRTFAILCHLLRNVAGLSS
Sbjct: 1   MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS 60

Query: 149 TEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV 208
           TEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV
Sbjct: 61  TEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV 120

Query: 209 PVTKLPWRVRWDVHKGQRPRRRSTYF-----------FRTRKGKIATNVLGVCDTKGDFV 268
           PVT      RW   +        TY            FRTRKG+IATNVLGVCDTKGDFV
Sbjct: 121 PVTSNCNDQRWKCFENCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFV 180

Query: 269 YVLADWEGSAADSRILRDAISRENGLQVPKGYYYLYDAGYPNAEGFLAPYRGQRYHLQEW 328
           YVLA WEGSAADSRILRDAISRENGLQVPKGYYYL DAGYPNAEGFLAPYRGQRYHLQEW
Sbjct: 181 YVLAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQEW 240

Query: 329 RGAANAPTNAKEYFNMKHSSASNVIERAFGVLKGRWTILRGKSYYPLQVQCRTILACTLL 388
           RGAANAPTNAKEYFNMKHSSA NVIERAFGVLKGRW ILRGKSYYPLQVQCRTILAC LL
Sbjct: 241 RGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACALL 300

Query: 389 HNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLR 439
           HNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLA SMFT+WQ R
Sbjct: 301 HNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAASMFTDWQFR 360

[Close]

BLAST of MELO.jh102558.1 vs. ExPASy TrEMBL
Match: A0A5A7STY2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold708G00110 PE=3 SV=1)

HSP 1 Score: 630 bits (1626), Expect = 2.88e-225
Identity = 323/366 (88.25%), Postives = 327/366 (89.34%), Query Frame = 0


Query: 85  LELLMNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSKRMDRRTFAILCHLLRNVA 144
           LELLMNNNKRLPHTPPDTRHRIRELAYFRMIHESDLV RQS RMDRRTFAILCHLLRNVA
Sbjct: 2   LELLMNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVSRQSTRMDRRTFAILCHLLRNVA 61

Query: 145 GLSSTEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELI 204
           GLSSTEIVDVEEMVAMFLHVLAHD+KNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELI
Sbjct: 62  GLSSTEIVDVEEMVAMFLHVLAHDMKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELI 121

Query: 205 KRPVPVTKLPWRVRWDVHKGQRPRRRSTYF-----------FRTRKGKIATNVLGVCDTK 264
           KRPVPVT      RW   +        TY            FRTRKGKIATNVLGVCDTK
Sbjct: 122 KRPVPVTSNCNDQRWKCFENCLGALDGTYIKVNVPAGDRPTFRTRKGKIATNVLGVCDTK 181

Query: 265 GDFVYVLADWEGSAADSRILRDAISRENGLQVPKGYYYLYDAGYPNAEGFLAPYRGQRYH 324
           GDFVYVLA WEGSAADSRILRDAISRENGLQVPKGYYYL DAGYPNAEGFLAPYRGQRYH
Sbjct: 182 GDFVYVLAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYH 241

Query: 325 LQEWRGAANAPTNAKEYFNMKHSSASNVIERAFGVLKGRWTILRGKSYYPLQVQCRTILA 384
           LQEWRGAANAPTNAKEYFNMKHSSA NVIERAFGVLKGRW IL GKSYYPLQVQCRTILA
Sbjct: 242 LQEWRGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAILSGKSYYPLQVQCRTILA 301

Query: 385 CTLLHNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTE 439
           C LLHNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRD+LA SMFT+
Sbjct: 302 CALLHNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTD 361

[Close]

BLAST of MELO.jh102558.1 vs. ExPASy TrEMBL
Match: A0A5D3D7X8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001080 PE=3 SV=1)

HSP 1 Score: 630 bits (1624), Expect = 4.83e-225
Identity = 321/362 (88.67%), Postives = 325/362 (89.78%), Query Frame = 0


Query: 89  MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSKRMDRRTFAILCHLLRNVAGLSS 148
           MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQS RMDRRTFAILCHLLRNVAGLSS
Sbjct: 1   MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS 60

Query: 149 TEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV 208
           TEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV
Sbjct: 61  TEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV 120

Query: 209 PVTKLPWRVRWDVHKGQRPRRRSTYF-----------FRTRKGKIATNVLGVCDTKGDFV 268
           PVT      RW   +        TY            FRTRKG+IATNVLGVCDTKGDFV
Sbjct: 121 PVTSNCNDQRWKCFENCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFV 180

Query: 269 YVLADWEGSAADSRILRDAISRENGLQVPKGYYYLYDAGYPNAEGFLAPYRGQRYHLQEW 328
           YVLA WEGSAADSRILRDAISRENGLQVPKGYYYL DAGYPNAEGFLAPYRGQRYHLQEW
Sbjct: 181 YVLAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQEW 240

Query: 329 RGAANAPTNAKEYFNMKHSSASNVIERAFGVLKGRWTILRGKSYYPLQVQCRTILACTLL 388
           RGAANAPTNAKEYFNMKHSSA NVIERAFGVLKGRW ILRGKSYYPLQVQCRTILAC LL
Sbjct: 241 RGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACALL 300

Query: 389 HNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLR 439
           HNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRD+LA SMFT+WQ R
Sbjct: 301 HNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFR 360

[Close]

BLAST of MELO.jh102558.1 vs. ExPASy TrEMBL
Match: A0A5A7TXM1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G001020 PE=3 SV=1)

HSP 1 Score: 629 bits (1623), Expect = 6.86e-225
Identity = 319/362 (88.12%), Postives = 324/362 (89.50%), Query Frame = 0


Query: 89  MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSKRMDRRTFAILCHLLRNVAGLSS 148
           MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQS RMDRRTFAILCHLLRNVAGLSS
Sbjct: 1   MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS 60

Query: 149 TEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV 208
           TEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLL +LRLYEELIKRPV
Sbjct: 61  TEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLVILRLYEELIKRPV 120

Query: 209 PVTKLPWRVRWDVHKGQRPRRRSTYF-----------FRTRKGKIATNVLGVCDTKGDFV 268
           PVT      RW   +        TY            FRTRKG+IATN+LGVCDTKGDFV
Sbjct: 121 PVTSNCNDQRWKCFENCLGTLDGTYIKVNVPAGDRPTFRTRKGEIATNILGVCDTKGDFV 180

Query: 269 YVLADWEGSAADSRILRDAISRENGLQVPKGYYYLYDAGYPNAEGFLAPYRGQRYHLQEW 328
           YVLA WEGSAADSRILRDAISRENGLQVPKGYYYL DAGYPNAEGFLAPYRGQRYHLQEW
Sbjct: 181 YVLAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQEW 240

Query: 329 RGAANAPTNAKEYFNMKHSSASNVIERAFGVLKGRWTILRGKSYYPLQVQCRTILACTLL 388
           RGAANAPTNAKEYFNMKHSSA NVIERAFGVLKGRW ILRGKSYYPLQVQCRTILAC LL
Sbjct: 241 RGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACALL 300

Query: 389 HNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLR 439
           HNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLA SMFT+WQ R
Sbjct: 301 HNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAASMFTDWQFR 360

[Close]

BLAST of MELO.jh102558.1 vs. ExPASy TrEMBL
Match: A0A5A7UMZ4 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G00690 PE=3 SV=1)

HSP 1 Score: 627 bits (1617), Expect = 5.62e-224
Identity = 319/362 (88.12%), Postives = 324/362 (89.50%), Query Frame = 0


Query: 89  MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSKRMDRRTFAILCHLLRNVAGLSS 148
           MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQS RMDRRTFAILCHLLRNVAGLSS
Sbjct: 1   MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS 60

Query: 149 TEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV 208
           TEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV
Sbjct: 61  TEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV 120

Query: 209 PVTKLPWRVRWDVHKGQRPRRRSTYF-----------FRTRKGKIATNVLGVCDTKGDFV 268
           PVT      RW   +        TY            FRTRKG+IATNVLGVCDTKGDFV
Sbjct: 121 PVTSNCNDQRWKCFENYLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFV 180

Query: 269 YVLADWEGSAADSRILRDAISRENGLQVPKGYYYLYDAGYPNAEGFLAPYRGQRYHLQEW 328
           YVLA WEGSAADSRILRDAI RENGLQVPKGYYYL DAGYPNAEGFLAPYRGQRYHLQEW
Sbjct: 181 YVLAGWEGSAADSRILRDAILRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQEW 240

Query: 329 RGAANAPTNAKEYFNMKHSSASNVIERAFGVLKGRWTILRGKSYYPLQVQCRTILACTLL 388
           RGAANAPTNAKEYFNMKHSSA NVIERA+GVLKGRW ILRGKSYYPLQVQCRTILAC LL
Sbjct: 241 RGAANAPTNAKEYFNMKHSSARNVIERAYGVLKGRWAILRGKSYYPLQVQCRTILACALL 300

Query: 389 HNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLR 439
           HNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRD+LA SMFT+WQ R
Sbjct: 301 HNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFR 360

[Close]

BLAST of MELO.jh102558.1 vs. TAIR 10
Match: AT5G41980.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 165.2 bits (417), Expect = 1.2e-40
Identity = 100/282 (35.46%), Postives = 144/282 (51.06%), Query Frame = 0


Query: 112 FRMIHESDLVCRQSKRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKN 171
           +++++  +  C ++ RMD+  F  LC LL+    L  T  + +E  +A+FL ++ H+++ 
Sbjct: 32  YQILNGPNEQCFENFRMDKPVFYKLCDLLQTRGLLRHTNRIKIEAQLAIFLFIIGHNLRT 91

Query: 172 RVIQREFVRSGETVSRHFNIVLLAVLRLYEEL---------IKRPVPVTKLPWRVRWDVH 231
           R +Q  F  SGET+SRHFN VL AV+ + ++          ++   P  K    V    H
Sbjct: 92  RAVQELFCYSGETISRHFNNVLNAVIAISKDFFQPNSNSDTLENDDPYFKDCVGVVDSFH 151

Query: 232 KGQRPRRRSTYFFRTRKGKIATNVLGVCDTKGDFVYVLADWEGSAADSRILRDAISRENG 291
                       FR   G +  NVL        F YVLA WEGSA+D ++L  A++R N 
Sbjct: 152 IPVMVGVDEQGPFRNGNGLLTQNVLAASSFDLRFNYVLAGWEGSASDQQVLNAALTRRNK 211

Query: 292 LQVPKGYYYLYDAGYPNAEGFLAPYRGQRYHLQEWRGAANAPTNAKEYFNMKHSSASNVI 351
           LQVP+G YY+ D  YPN  GF+APY G          + N+   AKE FN +H      I
Sbjct: 212 LQVPQGKYYIVDNKYPNLPGFIAPYHGV---------STNSREEAKEMFNERHKLLHRAI 271

Query: 352 ERAFGVLKGRWTILRGKSYYPLQVQCRTILACTLLHNLINRE 385
            R FG LK R+ IL     YPLQ Q + ++A   LHN +  E
Sbjct: 272 HRTFGALKERFPILLSAPPYPLQTQVKLVIAACALHNYVRLE 304

[Close]

BLAST of MELO.jh102558.1 vs. TAIR 10
Match: AT5G35695.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 117.5 bits (293), Expect = 2.8e-26
Identity = 71/193 (36.79%), Postives = 101/193 (52.33%), Query Frame = 0


Query: 256 FVYVLADWEGSAADSRILRDAISRENGLQVPKGYYYLYDAGYPNAEGFLAPYRGQRYHLQ 315
           F+YVL+ WEGSA DSR+L DA+ +          +YL D G+ N   FLAP+RG RYHLQ
Sbjct: 25  FIYVLSGWEGSAHDSRVLSDALRK----------FYLVDCGFANRLNFLAPFRGVRYHLQ 84

Query: 316 EWRGAANAPTNAKEYFNMKHSSASNVIERAFGVLKGRWTILRGKSYYPLQVQCRTILACT 375
           E+ G    P    E FN++H S  NVIER FG+ K R+ I +    +  + Q   +L C 
Sbjct: 85  EFAGQRRDPETPHELFNLRHVSLRNVIERIFGIFKSRFAIFKSAPPFSYKKQAGLVLTCA 144

Query: 376 LLHNLINR-----EMTYCDDVEDE-----DEGDSTYATTTASED-----IQYIETTNEWS 434
            LHN + +     E  + D+V +E     +EG++       +E+      Q  E TN   
Sbjct: 145 ALHNFLRKECRSDEADFPDEVGNEGDVVNNEGNAMNTNEIDNEEPLEAQKQDRENTN--- 204

[Close]

BLAST of MELO.jh102558.1 vs. TAIR 10
Match: AT1G43722.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 115.2 bits (287), Expect = 1.4e-25
Identity = 82/267 (30.71%), Postives = 124/267 (46.44%), Query Frame = 0


Query: 112 FRMIHESDLVCRQSKRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKN 171
           +R + +    C Q  RM    F  LC++L+    L  T  + +EE VAMFL +  H+   
Sbjct: 56  WRRLQQDAAACLQLLRMSLPCFTTLCNMLQTNYDLQPTLNISIEESVAMFLRICGHNEVY 115

Query: 172 RVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV--PVTKLPWRVR-----WDVHKG 231
           R +   F R+ ETV R F  VL A   L  + I+ P    + ++P R++     W    G
Sbjct: 116 RDVGLRFGRNQETVQRKFREVLTATELLACDYIRTPTRQELYRIPERLQVDQRYWPYFSG 175

Query: 232 -------------QRPRRRSTYFFRTRKGKIATNVLGVCDTKGDFVYVLADWEGSAADSR 291
                         +P  +  Y+   R    + N++ +CD K  F Y+     GS  D+ 
Sbjct: 176 FVGAMDGTHVCVKVKPDLQGMYW--NRHDNASLNIMAICDLKMLFTYIWNGAPGSCYDTA 235

Query: 292 ILRDAISRENGLQVPKG-YYYLYDAGYPNAEGFLAPYRGQ-----RYHLQEWRGAANAPT 351
           +L+ A   ++   +P    YYL D+GYPN +G LAPYR       RYH+ ++      P 
Sbjct: 236 VLQIAQQSDSEFPLPPSEKYYLVDSGYPNKQGLLAPYRSSRNRVVRYHMSQFYYGPR-PR 295

Query: 352 NAKEYFNMKHSSASNVIERAFGVLKGR 353
           N  E FN  H+S  +VIER F + K +
Sbjct: 296 NKHELFNQCHTSLRSVIERTFRIWKNK 319

[Close]

BLAST of MELO.jh102558.1 vs. TAIR 10
Match: AT5G28730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 496 Blast hits to 496 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 23; Plants - 470; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 98.2 bits (243), Expect = 1.7e-20
Identity = 75/228 (32.89%), Postives = 105/228 (46.05%), Query Frame = 0


Query: 115 IHESDLVCRQSKRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRVI 174
           I+ +++ C+   RM    F  LC +L    GL S+  + ++E VA+FL + A +   R I
Sbjct: 17  IYSNEVSCQTLIRMSSEAFTQLCEILHGKYGLQSSTNISLDESVAIFLIICASNDTQRDI 76

Query: 175 QREFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPVTKLPWRVRWDVHKGQRPRRRSTYF 234
              F  + ET+ R F+ VL A+ RL  E I RP  V +L       +    +   R   F
Sbjct: 77  ALRFGHAQETIWRKFHDVLKAMERLAVEYI-RPRKVEELR-----AISNRLQDDTRYWPF 136

Query: 235 FRTRKGKIATNVLGVCDTKGDFVYVLADWEGSAADSRILRDAISRENGLQV-PKGYYYLY 294
                G  + NVL +CD    F Y      GS  D+R+L  AIS +    V P   YYL 
Sbjct: 137 LMDLLGIASFNVLAICDLDMLFTYCFVGMAGSTHDARVLSAAISDDPLFHVPPDSKYYLV 196

Query: 295 DAGYPNAEGFLAPYRGQRYHLQEWRGAANAPTNAKEYFNMKHSSASNV 342
           D+GY N  G+LAPYR +    Q+         N  E  N+K     NV
Sbjct: 197 DSGYANKRGYLAPYRREHREAQDIISNNFLTVNLFETHNIKDYDFDNV 238

[Close]

BLAST of MELO.jh102558.1 vs. TAIR 10
Match: AT4G10890.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2439 (InterPro:IPR018838); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 62.8 bits (151), Expect = 8.1e-10
Identity = 33/89 (37.08%), Postives = 48/89 (53.93%), Query Frame = 0


Query: 269 DSRILRDAISRENGLQVPKG-YYYLYDAGYPNAEGFLAPYRGQRYHLQEWRGAANAPTNA 328
           D+++L+     E+    P    YYL ++ YP   G+L P+R   YHL ++ G    P   
Sbjct: 73  DTKVLKYCARNESFSPHPSNRKYYLVNSVYPTTTGYLGPHRRILYHLGQF-GRGGPPVTV 132

Query: 329 KEYFNMKHSSASNVIERAFGVLKGRWTIL 357
           +E FN KH    +VI+R FGV K +W IL
Sbjct: 133 QELFNRKHLDLRSVIDRTFGVWKAKWRIL 160

The following BLAST results are available for this feature:

BLAST of MELO.jh102558.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0056561.1	1.73e-225	88.95	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0032767.1	5.96e-225	88.25	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0031556.1	9.98e-225	88.67	retrotransposon protein [Cucumis melo var. makuwa] >KAA0033743.1 retrotransposon...	[more]
KAA0048383.1	1.42e-224	88.12	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0056564.1	1.16e-223	88.12	retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of MELO.jh102558.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO.jh102558.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UST8	8.37e-226	88.95	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7STY2	2.88e-225	88.25	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3D7X8	4.83e-225	88.67	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TXM1	6.86e-225	88.12	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7UMZ4	5.62e-224	88.12	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of MELO.jh102558.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G41980.1	1.2e-40	35.46	CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int...	[more]
AT5G35695.1	2.8e-26	36.79	CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int...	[more]
AT1G43722.1	1.4e-25	30.71	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G28730.1	1.7e-20	32.89	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G10890.1	8.1e-10	37.08	unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2439...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027806	Harbinger transposase-derived nuclease domain	PFAM	PF13359	DDE_Tnp_4	coord: 225..379 e-value: 8.5E-22 score: 77.5
None	No IPR available	PANTHER	PTHR22930:SF211	NUCLEASE HARBI1-RELATED	coord: 90..436
None	No IPR available	PANTHER	PTHR22930	UNCHARACTERIZED	coord: 90..436

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO.jh102558.1.t1	MELO.jh102558.1.t1	mRNA