MELO.jh102112.1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh102112.1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Ty3/gypsy retrotransposon protein
Location	chr08: 2116092 .. 2121580 (+)
RNA-Seq Expression	MELO.jh102112.1
Synteny	MELO.jh102112.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGTTGTTGAGTACTGTGACTGTTAGAGAAGATAGAAGTGACAGTTTGAGCCAACCCCACCATGATTCTGTTAGACCTCTTATTAAACATGTGTACAGTAGAAGGAAGAAGTAGAATGAAAAAGAATTTTAGCACGTGAGATTTAAATAGGTTAGTGGTGGGAAAGTTAGTGGAGTGACAGCTGTCCTTGAGTGAGAATTCTGTTTAAAAGACAGTTGTCTTTTGGTGGGAAAACATGTTCTGTTTTGTGTAGTTGTTAGTTCATTCAGAATTCTTCTGGTTGAGAGAAGAATTGAATTGTTCTTGTAACCCTAGATTGTCATTCCTACATTCTTGTGATTGATAGAAAGTAAATTCAATAAAGAAAGAAATACCAGAATTGTTTGGAGTTCCAACATTTTGGTATCAGAGCCAAAGATCCGAAAAACAGAAGGAATATGGTACAGACGCGGATTGAGGAGCGATTGGAATGCATAGATCAAGAAATTGCCGGTATGAAGAAGGAATTGAGCAAGGTGCCGGCGATCGAAATGAGCTTGAGCGAAATTGCGAAAAGTCTGGAATTAATGAGGTTGCAGTCGGAAAAGCAACAGCAATTGTTGTTTACGATTGTTGAGTCCAATACGAAAGAGAGATCGACGATGAGCCGTTTGGAGACGGAATCCGCCGCGAAAGAGTTTGAGAAGATGAAAGGAAAGGAAGACGACGCATCATCCAGTAAAGCGATTGACTCGGGCCGAAATTTCGGAGCAGACAGAAACGATCGAAGGATCGACGGTGACGACGGCGCGGCTGATCGAAACAAATTTAAGAAGATTGAGATGCCGGTTTTTACGGGAGAAGATCCGGACTCTTGGCTTTTCAGAGCAGAGAGGTATTTTCAAATTCATAAGCTAACTGATTCTGAGAAAATGTTAGTATCTACAATTAGTTTTGATGGTCCGGCATTAAACTGGTTTCGTTCACAAGAAGAGAGAGATAAGTTCACTAATTGGTCGAATATGAAGGAGAGATTGTTAATTCGTTTTCGATCTAACAAGGATGGAACACTCTCTGGGCAGTTTTTGAGAATTAAACAGGAGGGTACGGTGGAGGAGTATATCAACTTGTTTGACAAAATGGTAGCTCCGGTGAATGATTTACCCGAACGAGTAATTTTAGACACATTTATGAATGGGTTATTACCGTGGGTGAGATCTGAAGTTTTTTTTTGTCGACCGAAAAGTTTGGCAGAAATGATGGAAGCAGCACAGATGGTTGAAAACAGAGAAATAGCAAGAATTGAAGCTAAAATGAGTGGTTATTCAGGGGGAAGGTTAACAGCAAATAATAATGCTGTGGGAAAGACATCTACTGGAGCTATAGCAGGGGATAATAAGAATAACACTGTCTTCCCCATTCGAACTATTACCCTGAGAAGTTCTGTTCCGAATGAAAATCGAAGGGAAGGGACTTATAAAAGATTACCTGATGCTGAATTTCAGGCCAGAAAAGAGAAAGGATTATGTTTTCGTTGTAATGAAAAATACTCTGCTGATCATAAATGTAGATTAAGAGAACAAAGGGAGCTGAGGATGTTTGTGGTGACGGATGATAGAGATGAATATGAAATTGTTGAAGAAGAAAATGAAAGGAAGGAATTGAGTTGTATAGAGCTCAAGGAAGATGTCACTACCGTGGTTGAGTTATCAATCAACTCGGTAGTAGGCTTAAACGATCCGGTACTATGAAAGTAAGAGGCAAATTATGTGGTGAAGAAGTGGTAGTTTTGATTGATTGTGGTGCGACACATAATTTTGTGTCGAAAAATTAGTGAAGAAATTATCCCCCATTAAAGAAACATCTCATTACGGTGTGATCTTAGGATCGGGGGCCGGGGTAAGGAGTTTGTGAAAAATTGGAGGTGCAGATGGGGGTTGGAAAATAGTAGAGGACTTCCTTCCATTGGAGCTTGGTGGAGTTGACGTTATCTTGGGAATGCAATGGTTATATTCCTTGGGAGTAACCACGTAGATTGGAAAAATCTATCAATGACCTTTATAGCGATGGGAAAGAGGTCAAAATCAAAGGAGACCCTAGTCTAACGAAGGCAAGGATTAGTCTAAAAAATTGATAAAACTGGGAAGATAAAGACACTGGATATTTGATTGAATGTAGATCATTGCAAGTAAAGACTTTAGAGGAGAATGAACACGGTTTGTTCAGAAGAAGTGAGCAAGGTGTGAGCGAAGGACCCATCAGTTCAGTCATCGAACAATTTTCGATGTTTTTGATTGGCCGAGAAGTTACCACCTCGAAGGAAATAGAACATCACATCCATTTGAAGGAGGAACTAATCCAATTAATGTGCGACCATATCGATATGGTTTTCACCAAAAAGAGGAGATGGAGAAACTAGTTAGAGAAATGCTGAATTCAGGGGTAATAAGGCCGAGTACTAGTCCATATTCAAGTCTGTATTCTTGGTTAAAAAAGATGGCAGCTGGCGATTTTGTGTGGATTATAGAGCTGTCAATAATGCCACCATTCCAGATAAGTTTCCCATTCCGGTGGTGGAAGAGTTATTTGATGAACTATGTGGGGCAACCTTGTTTTCTAAGATTGATTTGAAGTCAGGTTACCATCAAATCAGGATGGTCGATGAGGATGTTGAGAAAACGGCTTTCCGAACACATGAAGGCCATTATGAATTCTTAGTAATGCCCTTCGGGCTGACCAATGCTCCAGCCACTTTTCAAGCATTAATGAATAATATATTCAAGCCATTTCTCAGGAAGTTTGTGTTGGTTTTCTTTGATGACATATTAGTCTATAGTAGAAGTGAGGAAGAACACGAATTACACATGAAAAAGGTGCTGTCACTTCTAAGGCAGAATGAGTTATATGCTAACCAGAAGAAGTGTCACTTTGCACAGAAAAAAATTGAATATTTGGGCCATGTGATTTCAGGGGAAGGGGTAGCTGTGGATCCTGAGAAGATTAGATCTATTTCTAATTGGCCACAACCTACAAATGTTAAGGAGATTCGAGGGTTTTTGGGACTAACTGGATATTACCGACGCTTTGTGCAACATTATGGAACTATTGCTGCTCCATTAACTCAACAGTTAAAGAAGGGAGGATTTCATTGGAATGAGGAAGCCATGTTAGCTTTCGAACGGCTAAAATCAGCAATGATTAAGCTGCCGGTATTAGCTCTACCTGACTTTTCTAAGCAATTCGAAATAGAAGCTGATGCTTCGGGTTATGGAGTTGGAGCTGTCCTGGTCCAAGATGGAAGGCCAATTGCATTTTACAGTCACACTTTAGCATTAAGGGACCGAGCTCGGCCAGTGTATGAAAGGGAACTCATGGCTGTTGTGTTGGCGGTTCAGAGGTGGCGGCCCTATTTGCTGATAGGGAAATTTAAGGTAAAAACAGATCAGAAAGCACTTAAGTTTTTACTGGATCAGAGGATCATTCAGCCACAGTACCAAAAATGGATAGCTAAGCTATTAGGCTATTCCTTTGAAGTAGTTTACAAACCCGGAGTTGACAATGGTGCAGCCGATGCCTTATCCAGAAAACCAGATGGGGTGCAACTGTTTGGATTATCGATTCCAATCACTGTTGACTTGGAGGTGATAAAAAAGGAGGTGTATCAAGATCCAAAATATGAGAAGATTATAAAACAGTTAGAGCAAGGGGAGGAACTGTCTGAAAGCAATTACTCAATGCGGAGAGGGTTGCTGTTGTATAAGAACCGTCTGTAATTCTAAAACAATCTTCATTAATACCAATTCTTGATACTTTTCATAATTCGTAGTTGGGGTCACTCGTTTCTTAAGAACTTATAAAAGGAAAGCTGAATTGTTTTGGGAGGGAATGAAGGTGATATTAAAAACACCGTGAAGAGTGTTTAACATGTCAAAGGAGTAAGTCTTTGTCTCTGTCACCTGGTTTATTAGTTCCATTGGAAATTCCTCAAGTTTGGAGTGATATTTCAATGGATTTTGTAGAAGGCCTACCAAAATCAAGTGGATTTGAAGTAGTTCGGTTGTGGTAGACAGACTAAGTAAGTATGGACATTTTCCCTGAAACATCCGTATACTGCTAAATCAGTGGCTGAGTTATTTGTGAAAGAAATAGTGAGGTTGCATGGATTTCCATTATCCATTGTTTCGGATAGAGACAAGATTTTTGAGTCAATTTTGGTCCGAAATGTTTCGTTTATCGCACAAAATTGAACAAGAGCACCGCTTATCATCCTCAATCGGATGGCCAAACTGAGGTTGTCAACAGGGGAGTGGAAACCTATTTGAGGTGCTTCTGTAATGAAAAACCTAAAGATTGGTCAAAATGGCTGCCGTGGACAGAATATTGGTATAACACTACCTTTCAGCGTTCTATTGGAATGACTCCATTTCAGGTAGTGTATGGTAGGCAGCCTCCTACGCTTTTGTCCTATGGTAGTACATTGTCTAAGAATTCCACGGTTGAAGAAATGTTGCAAGAAAGAGATCTTGTTTTGGTGTCTTTGCGGGAGCATTTACTATTGGCTCAAGAACAAATGAAACGGTATGCAGATCAGAAGAGAAGAGCTGTGGAATATTCTGTGGGAGAATATGTGTTCTTACGTATTCGTCCTTATCGCCAACTGTCAGTGCGCAGTAGAAGAAATGAAAAACTTGCCCCACGTTTCTTTGGTCCATATAAAATTGTTGAAAGGATTGGGCCAGTGGCTTATCGATTACAGCTGCCAGAAAGTTCAAAGATTCATCCCGTATTTCATGTTTCACAGTTGAGGAAAATGGTGGGACATCATGAGGGATCTCAACCAACTATACAATTTGTTGATGAGAATTATGTGTGGAAATCGGATCCGGAAGAAGCTGTTGATTATCGTGAGACAGTGGCTGGGCAATGGGAAGTCTTAGTGTGCTGGAAAGGACTTCCTAAGCATGAAGCTTCTTGGGAATCTTATGATGAAATGCAGATTAAGTATCCAGCTTTTCACCTTGAGGACAAGGTGAATTTAAAAGGGAGGGGTATTGTTAGACCTCTTATTAAACATGTGTACAGTAGAAGGAAGAAGTAGAATGAAAAAGAATTTTAGCACGTGAGATTTAAATAGGTTAGTGGTGGGAAAGTTAGTGGAGTGACAGCTGTCCTTGAGTGAGAATTCTGTTTAAAAGACAGTTGTCTTTTGGTGGGAAAACATGTTCTGTTTTGTGTAGTTGTTAGTTCATTCAGAATTCTTCTGGTTGAGAGAAGAATTGAATTGTTCTTGTAACCCTAGATTGTCATTCCTACATTCTTGTGATTGATAGAAAGTAAATTCAATAAAGAAAGAAATACCAGAATTGTTTGGAGTTCCAACAGATTCCCATCTTCACTTGCCCTCTCTTTGGGATCAAACGCCCAGAAATTCTCCTTCCCAATCTCTGACCGTTGATGTTGTTCATCATCTTAGCTTCTTCACCCATCTTCTAGAGATATCAGTTTAA

mRNA sequence

ATGTTGTTGTTGAGTACTGTGACTGTTAGAGAAGATAGAAGTGACAGTTTGAGCCAACCCCACCATGATTCTGTTAGACCTCTTATTAAACATGTGTACAGTAGAAGGAAGAAAGCCAAAGATCCGAAAAACAGAAGGAATATGGTACAGACGCGGATTGAGGAGCGATTGGAATGCATAGATCAAGAAATTGCCGGTATGAAGAAGGAATTGAGCAAGGTGCCGGCGATCGAAATGAGCTTGAGCGAAATTGCGAAAAGTCTGGAATTAATGAGGTTGCAGTCGGAAAAGCAACAGCAATTGTTGTTTACGATTGTTGAGTCCAATACGAAAGAGAGATCGACGATGAGCCGTTTGGAGACGGAATCCGCCGCGAAAGAGTTTGAGAAGATGAAAGGAAAGGAAGACGACGCATCATCCAGTAAAGCGATTGACTCGGGCCGAAATTTCGGAGCAGACAGAAACGATCGAAGGATCGACGGTGACGACGGCGCGGCTGATCGAAACAAATTTAAGAAGATTGAGATGCCGGTTTTTACGGGAGAAGATCCGGACTCTTGGCTTTTCAGAGCAGAGAGGTATTTTCAAATTCATAAGCTAACTGATTCTGAGAAAATGTTAGTATCTACAATTAGTTTTGATGGTCCGGCATTAAACTGGTTTCGTTCACAAGAAGAGAGAGATAAGTTCACTAATTGGTCGAATATGAAGGAGAGATTGTTAATTCGTTTTCGATCTAACAAGGATGGAACACTCTCTGGGCAGTTTTTGAGAATTAAACAGGAGGGTACGGTGGAGGAGTATATCAACTTGTTTGACAAAATGGTAGCTCCGGTGAATGATTTACCCGAACGAGTAATTTTAGACACATTTATGAATGGGTTATTACCGTGGGTGAGATCTGAAGTTTTTTTTTGTCGACCGAAAAGTTTGGCAGAAATGATGGAAGCAGCACAGATGGTTGAAAACAGAGAAATAGCAAGAATTGAAGCTAAAATGAGTGGTTATTCAGGGGGAAGGTTAACAGCAAATAATAATGCTGTGGGAAAGACATCTACTGGAGCTATAGCAGGGGATAATAAGAATAACACTGTCTTCCCCATTCGAACTATTACCCTGAGAAGTTCTGTTCCGAATGAAAATCGAAGGGAAGGGACTTATAAAAGATTACCTGATGCTGAATTTCAGGCCAGAAAAGAGAAAGGATTATGTTTTCGTTGTAATGAAAAATACTCTGCTGATCATAAATGTAGATTAAGAGAACAAAGGGAGCTGAGGATGTTTGTGGTGACGGATGATAGAGATGAATATGAAATTGTTGAAGAAGAAAATGAAAGGAAGGAATTGAGTTGTATAGAGCTCAAGGAAGATGTCACTACCGTGGTTGAGTTATCAATCAACTCGGTAGTAGGCTTAAACGATCCGACTTTAGAGGAGAATGAACACGGTTTGTTCAGAAGAAGTGAGCAAGGTGTGAGCGAAGGACCCATCAGTTCAGTCATCGAACAATTTTCGATGTTTTTGATTGGCCGAGAAGTTACCACCTCGAAGGAAATAGAACATCACATCCATTTGAAGGAGGAACTAATCCAATTAATGTGCGACCATATCGATATGGTTTTCACCAAAAAGAGGAGATGGAGAAACTACTGGCGATTTTGTGTGGATTATAGAGCTGTCAATAATGCCACCATTCCAGATAAGTTTCCCATTCCGGTGGTGGAAGAGTTATTTGATGAACTATGTGGGGCAACCTTGTTTTCTAAGATTGATTTGAAGTCAGGTTACCATCAAATCAGGATGGTCGATGAGGATGTTGAGAAAACGGCTTTCCGAACACATGAAGGCCATTATGAATTCTTAGTAATGCCCTTCGGGCTGACCAATGCTCCAGCCACTTTTCAAGCATTAATGAATAATATATTCAAGCCATTTCTCAGGAAGTTTGTGTTGGTTTTCTTTGATGACATATTAGTCTATAGTAGAAGTGAGGAAGAACACGAATTACACATGAAAAAGGTGCTGTCACTTCTAAGGCAGAATGAGTTATATGCTAACCAGAAGAAGTGTCACTTTGCACAGAAAAAAATTGAATATTTGGGCCATGTGATTTCAGGGGAAGGGGTAGCTGTGGATCCTGAGAAGATTAGATCTATTTCTAATTGGCCACAACCTACAAATGTTAAGGAGATTCGAGGGTTTTTGGGACTAACTGGATATTACCGACGCTTTGTGCAACATTATGGAACTATTGCTGCTCCATTAACTCAACAGTTAAAGAAGGGAGGATTTCATTGGAATGAGGAAGCCATGTTAGCTTTCGAACGGCTAAAATCAGCAATGATTAAGCTGCCGGTATTAGCTCTACCTGACTTTTCTAAGCAATTCGAAATAGAAGCTGATGCTTCGGGTTATGGAGTTGGAGCTGTCCTGGTCCAAGATGGAAGGCCAATTGCATTTTACAGTCACACTTTAGCATTAAGGGACCGAGCTCGGCCAGTGTATGAAAGGGAACTCATGGCTGTTGTGTTGGCGGTTCAGAGGTGGCGGCCCTATTTGCTGATAGGGAAATTTAAGGTAAAAACAGATCAGAAAGCACTTAAGTTTTTACTGGATCAGAGGATCATTCAGCCACAGTACCAAAAATGGATAGCTAAGCTATTAGGCTATTCCTTTGAAGTAGTTTACAAACCCGGAGTTGACAATGGTGCAGCCGATGCCTTATCCAGAAAACCAGATGGGGTGCAACTGTTTGGATTATCGATTCCAATCACTGTTGACTTGGAGGTGATAAAAAAGGAGGTGTATCAAGATCCAAAATATGAGAAGATTATAAAACAGTTAGAGCAAGGGGAGGAACTGTCTGAAAGCAATTACTCAATGCGGAGAGGGTTGCTGTTGTATAAGAACCGTCTGGGAGTGGAAACCTATTTGAGGTGCTTCTGTAATGAAAAACCTAAAGATTGGTCAAAATGGCTGCCGTGGACAGAATATTGGTATAACACTACCTTTCAGCGTTCTATTGGAATGACTCCATTTCAGGTAGTGTATGGTAGGCAGCCTCCTACGCTTTTGTCCTATGGTAGTACATTGTCTAAGAATTCCACGGTTGAAGAAATGTTGCAAGAAAGAGATCTTGTTTTGGTGTCTTTGCGGGAGCATTTACTATTGGCTCAAGAACAAATGAAACGGTATGCAGATCAGAAGAGAAGAGCTGTGGAATATTCTGTGGGAGAATATGTGTTCTTACGTATTCGTCCTTATCGCCAACTGTCAGTGCGCAGTAGAAGAAATGAAAAACTTGCCCCACGTTTCTTTGGTCCATATAAAATTGTTGAAAGGATTGGGCCAGTGGCTTATCGATTACAGCTGCCAGAAAGTTCAAAGATTCATCCCGTATTTCATGTTTCACAGTTGAGGAAAATGGTGGGACATCATGAGGGATCTCAACCAACTATACAATTTGTTGATGAGAATTATGTGTGGAAATCGGATCCGGAAGAAGCTGTTGATTATCGTGAGACAGTGGCTGGGCAATGGGAAGTCTTAGTGTGCTGGAAAGGACTTCCTAAGCATGAAGCTTCTTGGGAATCTTATGATGAAATGCAGATTAAGTATCCAGCTTTTCACCTTGAGGACAAGAAAGTAAATTCAATAAAGAAAGAAATACCAGAATTGTTTGGAGTTCCAACAGATTCCCATCTTCACTTGCCCTCTCTTTGGGATCAAACGCCCAGAAATTCTCCTTCCCAATCTCTGACCGTTGATGTTGTTCATCATCTTAGCTTCTTCACCCATCTTCTAGAGATATCAGTTTAA

Coding sequence (CDS)

ATGTTGTTGTTGAGTACTGTGACTGTTAGAGAAGATAGAAGTGACAGTTTGAGCCAACCCCACCATGATTCTGTTAGACCTCTTATTAAACATGTGTACAGTAGAAGGAAGAAAGCCAAAGATCCGAAAAACAGAAGGAATATGGTACAGACGCGGATTGAGGAGCGATTGGAATGCATAGATCAAGAAATTGCCGGTATGAAGAAGGAATTGAGCAAGGTGCCGGCGATCGAAATGAGCTTGAGCGAAATTGCGAAAAGTCTGGAATTAATGAGGTTGCAGTCGGAAAAGCAACAGCAATTGTTGTTTACGATTGTTGAGTCCAATACGAAAGAGAGATCGACGATGAGCCGTTTGGAGACGGAATCCGCCGCGAAAGAGTTTGAGAAGATGAAAGGAAAGGAAGACGACGCATCATCCAGTAAAGCGATTGACTCGGGCCGAAATTTCGGAGCAGACAGAAACGATCGAAGGATCGACGGTGACGACGGCGCGGCTGATCGAAACAAATTTAAGAAGATTGAGATGCCGGTTTTTACGGGAGAAGATCCGGACTCTTGGCTTTTCAGAGCAGAGAGGTATTTTCAAATTCATAAGCTAACTGATTCTGAGAAAATGTTAGTATCTACAATTAGTTTTGATGGTCCGGCATTAAACTGGTTTCGTTCACAAGAAGAGAGAGATAAGTTCACTAATTGGTCGAATATGAAGGAGAGATTGTTAATTCGTTTTCGATCTAACAAGGATGGAACACTCTCTGGGCAGTTTTTGAGAATTAAACAGGAGGGTACGGTGGAGGAGTATATCAACTTGTTTGACAAAATGGTAGCTCCGGTGAATGATTTACCCGAACGAGTAATTTTAGACACATTTATGAATGGGTTATTACCGTGGGTGAGATCTGAAGTTTTTTTTTGTCGACCGAAAAGTTTGGCAGAAATGATGGAAGCAGCACAGATGGTTGAAAACAGAGAAATAGCAAGAATTGAAGCTAAAATGAGTGGTTATTCAGGGGGAAGGTTAACAGCAAATAATAATGCTGTGGGAAAGACATCTACTGGAGCTATAGCAGGGGATAATAAGAATAACACTGTCTTCCCCATTCGAACTATTACCCTGAGAAGTTCTGTTCCGAATGAAAATCGAAGGGAAGGGACTTATAAAAGATTACCTGATGCTGAATTTCAGGCCAGAAAAGAGAAAGGATTATGTTTTCGTTGTAATGAAAAATACTCTGCTGATCATAAATGTAGATTAAGAGAACAAAGGGAGCTGAGGATGTTTGTGGTGACGGATGATAGAGATGAATATGAAATTGTTGAAGAAGAAAATGAAAGGAAGGAATTGAGTTGTATAGAGCTCAAGGAAGATGTCACTACCGTGGTTGAGTTATCAATCAACTCGGTAGTAGGCTTAAACGATCCGACTTTAGAGGAGAATGAACACGGTTTGTTCAGAAGAAGTGAGCAAGGTGTGAGCGAAGGACCCATCAGTTCAGTCATCGAACAATTTTCGATGTTTTTGATTGGCCGAGAAGTTACCACCTCGAAGGAAATAGAACATCACATCCATTTGAAGGAGGAACTAATCCAATTAATGTGCGACCATATCGATATGGTTTTCACCAAAAAGAGGAGATGGAGAAACTACTGGCGATTTTGTGTGGATTATAGAGCTGTCAATAATGCCACCATTCCAGATAAGTTTCCCATTCCGGTGGTGGAAGAGTTATTTGATGAACTATGTGGGGCAACCTTGTTTTCTAAGATTGATTTGAAGTCAGGTTACCATCAAATCAGGATGGTCGATGAGGATGTTGAGAAAACGGCTTTCCGAACACATGAAGGCCATTATGAATTCTTAGTAATGCCCTTCGGGCTGACCAATGCTCCAGCCACTTTTCAAGCATTAATGAATAATATATTCAAGCCATTTCTCAGGAAGTTTGTGTTGGTTTTCTTTGATGACATATTAGTCTATAGTAGAAGTGAGGAAGAACACGAATTACACATGAAAAAGGTGCTGTCACTTCTAAGGCAGAATGAGTTATATGCTAACCAGAAGAAGTGTCACTTTGCACAGAAAAAAATTGAATATTTGGGCCATGTGATTTCAGGGGAAGGGGTAGCTGTGGATCCTGAGAAGATTAGATCTATTTCTAATTGGCCACAACCTACAAATGTTAAGGAGATTCGAGGGTTTTTGGGACTAACTGGATATTACCGACGCTTTGTGCAACATTATGGAACTATTGCTGCTCCATTAACTCAACAGTTAAAGAAGGGAGGATTTCATTGGAATGAGGAAGCCATGTTAGCTTTCGAACGGCTAAAATCAGCAATGATTAAGCTGCCGGTATTAGCTCTACCTGACTTTTCTAAGCAATTCGAAATAGAAGCTGATGCTTCGGGTTATGGAGTTGGAGCTGTCCTGGTCCAAGATGGAAGGCCAATTGCATTTTACAGTCACACTTTAGCATTAAGGGACCGAGCTCGGCCAGTGTATGAAAGGGAACTCATGGCTGTTGTGTTGGCGGTTCAGAGGTGGCGGCCCTATTTGCTGATAGGGAAATTTAAGGTAAAAACAGATCAGAAAGCACTTAAGTTTTTACTGGATCAGAGGATCATTCAGCCACAGTACCAAAAATGGATAGCTAAGCTATTAGGCTATTCCTTTGAAGTAGTTTACAAACCCGGAGTTGACAATGGTGCAGCCGATGCCTTATCCAGAAAACCAGATGGGGTGCAACTGTTTGGATTATCGATTCCAATCACTGTTGACTTGGAGGTGATAAAAAAGGAGGTGTATCAAGATCCAAAATATGAGAAGATTATAAAACAGTTAGAGCAAGGGGAGGAACTGTCTGAAAGCAATTACTCAATGCGGAGAGGGTTGCTGTTGTATAAGAACCGTCTGGGAGTGGAAACCTATTTGAGGTGCTTCTGTAATGAAAAACCTAAAGATTGGTCAAAATGGCTGCCGTGGACAGAATATTGGTATAACACTACCTTTCAGCGTTCTATTGGAATGACTCCATTTCAGGTAGTGTATGGTAGGCAGCCTCCTACGCTTTTGTCCTATGGTAGTACATTGTCTAAGAATTCCACGGTTGAAGAAATGTTGCAAGAAAGAGATCTTGTTTTGGTGTCTTTGCGGGAGCATTTACTATTGGCTCAAGAACAAATGAAACGGTATGCAGATCAGAAGAGAAGAGCTGTGGAATATTCTGTGGGAGAATATGTGTTCTTACGTATTCGTCCTTATCGCCAACTGTCAGTGCGCAGTAGAAGAAATGAAAAACTTGCCCCACGTTTCTTTGGTCCATATAAAATTGTTGAAAGGATTGGGCCAGTGGCTTATCGATTACAGCTGCCAGAAAGTTCAAAGATTCATCCCGTATTTCATGTTTCACAGTTGAGGAAAATGGTGGGACATCATGAGGGATCTCAACCAACTATACAATTTGTTGATGAGAATTATGTGTGGAAATCGGATCCGGAAGAAGCTGTTGATTATCGTGAGACAGTGGCTGGGCAATGGGAAGTCTTAGTGTGCTGGAAAGGACTTCCTAAGCATGAAGCTTCTTGGGAATCTTATGATGAAATGCAGATTAAGTATCCAGCTTTTCACCTTGAGGACAAGAAAGTAAATTCAATAAAGAAAGAAATACCAGAATTGTTTGGAGTTCCAACAGATTCCCATCTTCACTTGCCCTCTCTTTGGGATCAAACGCCCAGAAATTCTCCTTCCCAATCTCTGACCGTTGATGTTGTTCATCATCTTAGCTTCTTCACCCATCTTCTAGAGATATCAGTTTAA

Protein sequence

MLLLSTVTVREDRSDSLSQPHHDSVRPLIKHVYSRRKKAKDPKNRRNMVQTRIEERLECIDQEIAGMKKELSKVPAIEMSLSEIAKSLELMRLQSEKQQQLLFTIVESNTKERSTMSRLETESAAKEFEKMKGKEDDASSSKAIDSGRNFGADRNDRRIDGDDGAADRNKFKKIEMPVFTGEDPDSWLFRAERYFQIHKLTDSEKMLVSTISFDGPALNWFRSQEERDKFTNWSNMKERLLIRFRSNKDGTLSGQFLRIKQEGTVEEYINLFDKMVAPVNDLPERVILDTFMNGLLPWVRSEVFFCRPKSLAEMMEAAQMVENREIARIEAKMSGYSGGRLTANNNAVGKTSTGAIAGDNKNNTVFPIRTITLRSSVPNENRREGTYKRLPDAEFQARKEKGLCFRCNEKYSADHKCRLREQRELRMFVVTDDRDEYEIVEEENERKELSCIELKEDVTTVVELSINSVVGLNDPTLEENEHGLFRRSEQGVSEGPISSVIEQFSMFLIGREVTTSKEIEHHIHLKEELIQLMCDHIDMVFTKKRRWRNYWRFCVDYRAVNNATIPDKFPIPVVEELFDELCGATLFSKIDLKSGYHQIRMVDEDVEKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNNIFKPFLRKFVLVFFDDILVYSRSEEEHELHMKKVLSLLRQNELYANQKKCHFAQKKIEYLGHVISGEGVAVDPEKIRSISNWPQPTNVKEIRGFLGLTGYYRRFVQHYGTIAAPLTQQLKKGGFHWNEEAMLAFERLKSAMIKLPVLALPDFSKQFEIEADASGYGVGAVLVQDGRPIAFYSHTLALRDRARPVYERELMAVVLAVQRWRPYLLIGKFKVKTDQKALKFLLDQRIIQPQYQKWIAKLLGYSFEVVYKPGVDNGAADALSRKPDGVQLFGLSIPITVDLEVIKKEVYQDPKYEKIIKQLEQGEELSESNYSMRRGLLLYKNRLGVETYLRCFCNEKPKDWSKWLPWTEYWYNTTFQRSIGMTPFQVVYGRQPPTLLSYGSTLSKNSTVEEMLQERDLVLVSLREHLLLAQEQMKRYADQKRRAVEYSVGEYVFLRIRPYRQLSVRSRRNEKLAPRFFGPYKIVERIGPVAYRLQLPESSKIHPVFHVSQLRKMVGHHEGSQPTIQFVDENYVWKSDPEEAVDYRETVAGQWEVLVCWKGLPKHEASWESYDEMQIKYPAFHLEDKKVNSIKKEIPELFGVPTDSHLHLPSLWDQTPRNSPSQSLTVDVVHHLSFFTHLLEISV

Homology

[Close]

BLAST of MELO.jh102112.1 vs. NCBI nr
Match: KAA0040118.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 2062 bits (5343), Expect = 0.0
Identity = 1130/1546 (73.09%), Postives = 1144/1546 (74.00%), Query Frame = 0


Query: 48   MVQTRIEERLECIDQEIAGMKKELSKVPAIEMSLSEIAKSLELMRLQSEKQQQLLFTIVE 107
            MVQTRIEERLECIDQEIAGMKKELSKVPAIEMSLSEIAKSLELMRLQSEKQQQLLFTIVE
Sbjct: 1    MVQTRIEERLECIDQEIAGMKKELSKVPAIEMSLSEIAKSLELMRLQSEKQQQLLFTIVE 60

Query: 108  SNTKERSTMSRLETESAAKEFEKMKGKEDDASSSKAIDSGRNFGADRNDRRIDGDDGAAD 167
            SNTKERSTMSRLETESAAKEFEKMKGKEDDASSSKAIDSGRNFGADRNDRRIDGDDGAAD
Sbjct: 61   SNTKERSTMSRLETESAAKEFEKMKGKEDDASSSKAIDSGRNFGADRNDRRIDGDDGAAD 120

Query: 168  RNKFKKIEMPVFTGEDPDSWLFRAERYFQIHKLTDSEKMLVSTISFDGPALNWFRSQEER 227
            RNKFKKIEMPVFTGEDPDSWLFRAERYFQIHKLTDSEKMLVSTISFDGPALNWFRSQEER
Sbjct: 121  RNKFKKIEMPVFTGEDPDSWLFRAERYFQIHKLTDSEKMLVSTISFDGPALNWFRSQEER 180

Query: 228  DKFTNWSNMKERLLIRFRSNKDGTLSGQFLRIKQEGTVEEYINLFDKMVAPVNDLPERVI 287
            DKFTNWSNMKERLLIRFRSNKDGTLSGQFLRIKQEGTVEEYINLFDKMVAPVNDLPERVI
Sbjct: 181  DKFTNWSNMKERLLIRFRSNKDGTLSGQFLRIKQEGTVEEYINLFDKMVAPVNDLPERVI 240

Query: 288  LDTFMNGLLPWVRSEVFFCRPKSLAEMMEAAQMVENREIARIEAKMSGYSGGRLTANNNA 347
            LDTFMNGLLPWVRSEVFFCRPKSLAEMMEAAQMVENREIARIEAKMSGYSGGRLTANNNA
Sbjct: 241  LDTFMNGLLPWVRSEVFFCRPKSLAEMMEAAQMVENREIARIEAKMSGYSGGRLTANNNA 300

Query: 348  VGKTSTGAIAGDNKNNTVFPIRTITLRSSVPNENRREGTYKRLPDAEFQARKEKGLCFRC 407
            VGKTSTGAIAGDNKNNTVFPIRTITLRSSVPNENRREGTYKRLPDAEFQARKEKGLCFRC
Sbjct: 301  VGKTSTGAIAGDNKNNTVFPIRTITLRSSVPNENRREGTYKRLPDAEFQARKEKGLCFRC 360

Query: 408  NEKYSADHKCRLREQRELRMFVVTDDRDEYEIVEEENERKELSCIELKEDVTTVVELSIN 467
            NEKYSADHKCRLREQRELRMFVVTDDRDEYEIVEEENERKELSCIELKEDVTTVVELSIN
Sbjct: 361  NEKYSADHKCRLREQRELRMFVVTDDRDEYEIVEEENERKELSCIELKEDVTTVVELSIN 420

Query: 468  SVVGLNDP---------------------------------------------------- 527
            SVVGLNDP                                                    
Sbjct: 421  SVVGLNDPGTMKVRGKLCGEEVVVLIDCGATHNFVSEKLVKKLSLPIKETSHYGVILGSG 480

Query: 528  ------------------------------------------------------------ 587
                                                                        
Sbjct: 481  AAVQGKGVCEKLEVQMGGWKIVEDFLPLELGGVDVILGMQWLYSLGVTTVDWKNLSMTFI 540

Query: 588  ---------------------------------------------TLEENEHGLFRRS-- 647
                                                         TLEENEH LF     
Sbjct: 541  ADGKEVKIKGDPSLTKARISLKKLIKNWEDKDTGYLIECRSLQVKTLEENEHSLFSTEAV 600

Query: 648  EQGVSEGPISSVIEQFS-MFLIGREVTTSKEIEHHIHLKE------------------EL 707
             + VSEGPISSVIEQFS +F    ++   +EIEHHIHLKE                  E+
Sbjct: 601  SKAVSEGPISSVIEQFSDVFDWPEKLPPRREIEHHIHLKEGTNPINVRPYRYGFHQKEEM 660

Query: 708  IQLMCDHID--------------MVFTKKRRWRNYWRFCVDYRAVNNATIPDKFPIPVVE 767
             +L+ + ++              ++  KK+     WRFCVDYRAVNNATIPDKFPIPVVE
Sbjct: 661  EKLVREMLNSGVIRPSTSPYSSPVLLVKKKD--GSWRFCVDYRAVNNATIPDKFPIPVVE 720

Query: 768  ELFDELCGATLFSKIDLKSGYHQIRMVDEDVEKTAFRTHEGHYEFLVMPFGLTNAPATFQ 827
            ELFDELCGATLFSKIDLKSGYHQIRMVDEDVEKTAFRTHEGHYEFLVMPFGLTNAPATFQ
Sbjct: 721  ELFDELCGATLFSKIDLKSGYHQIRMVDEDVEKTAFRTHEGHYEFLVMPFGLTNAPATFQ 780

Query: 828  ALMNNIFKPFLRKFVLVFFDDILVYSRSEEEHELHMKKVLSLLRQNELYANQKKCHFAQK 887
            ALMNNIFKPFLRKFVLVFFDDILVYSRSEEEHELHMKKVLSLLRQNELYANQKKCHFAQK
Sbjct: 781  ALMNNIFKPFLRKFVLVFFDDILVYSRSEEEHELHMKKVLSLLRQNELYANQKKCHFAQK 840

Query: 888  KIEYLGHVISGEGVAVDPEKIRSISNWPQPTNVKEIRGFLGLTGYYRRFVQHYGTIAAPL 947
            KIEYLGHVISGEGVAVDPEKIRSISNWPQPTNVKEIRGFLGLTGYYRRFVQHYGTIAAPL
Sbjct: 841  KIEYLGHVISGEGVAVDPEKIRSISNWPQPTNVKEIRGFLGLTGYYRRFVQHYGTIAAPL 900

Query: 948  TQQLKKGGFHWNEEAMLAFERLKSAMIKLPVLALPDFSKQFEIEADASGYGVGAVLVQDG 1007
            TQQLKKGGFHWNEEAMLAFERLKSAMIKLPVLALPDFSKQFEIEADASGYGVGAVLVQDG
Sbjct: 901  TQQLKKGGFHWNEEAMLAFERLKSAMIKLPVLALPDFSKQFEIEADASGYGVGAVLVQDG 960

Query: 1008 RPIAFYSHTLALRDRARPVYERELMAVVLAVQRWRPYLLIGKFKVKTDQKALKFLLDQRI 1067
            RPIAFYSHTLALRDRARPVYERELMAVVLAVQRWRPYLLIGKFKVKTDQKALKFLLDQRI
Sbjct: 961  RPIAFYSHTLALRDRARPVYERELMAVVLAVQRWRPYLLIGKFKVKTDQKALKFLLDQRI 1020

Query: 1068 IQPQYQKWIAKLLGYSFEVVYKPGVDNGAADALSRKPDGVQLFGLSIPITVDLEVIKKEV 1127
            IQPQYQKWIAKLLGYSFEVVYKPGVDNGAADALSRKPDGVQLFGLSIPITVDLEVIKKEV
Sbjct: 1021 IQPQYQKWIAKLLGYSFEVVYKPGVDNGAADALSRKPDGVQLFGLSIPITVDLEVIKKEV 1080

Query: 1128 YQDPKYEKIIKQLEQGEELSESNYSMRRGLLLYKNRL----------------------- 1187
            YQDPKYEKIIKQLEQGEELSESNYSMRRGLLLYKNRL                       
Sbjct: 1081 YQDPKYEKIIKQLEQGEELSESNYSMRRGLLLYKNRLVILKQSSLIPVILDTFHNSVVGG 1140

Query: 1188 ------------------------------------------------------------ 1214
                                                                        
Sbjct: 1141 HSGFLRTYKRAAAELFWEGMKADIKKHCEECLTCQRSKSLSLSPAGLLVPLEIPQAVWSD 1200

[Close]

BLAST of MELO.jh102112.1 vs. NCBI nr
Match: TYK20833.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK26440.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK31252.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 2049 bits (5308), Expect = 0.0
Identity = 1122/1546 (72.57%), Postives = 1140/1546 (73.74%), Query Frame = 0


Query: 48   MVQTRIEERLECIDQEIAGMKKELSKVPAIEMSLSEIAKSLELMRLQSEKQQQLLFTIVE 107
            MVQTRIEERLECIDQEIAGMKKELSKVPAIEMSLSEIAKSLELMRLQSEKQQQLLFTIVE
Sbjct: 1    MVQTRIEERLECIDQEIAGMKKELSKVPAIEMSLSEIAKSLELMRLQSEKQQQLLFTIVE 60

Query: 108  SNTKERSTMSRLETESAAKEFEKMKGKEDDASSSKAIDSGRNFGADRNDRRIDGDDGAAD 167
            SNTKERSTMSRLETESAAKEFEKMKGKEDDASSSKAIDSGRNFGADRNDRRIDGDDGAAD
Sbjct: 61   SNTKERSTMSRLETESAAKEFEKMKGKEDDASSSKAIDSGRNFGADRNDRRIDGDDGAAD 120

Query: 168  RNKFKKIEMPVFTGEDPDSWLFRAERYFQIHKLTDSEKMLVSTISFDGPALNWFRSQEER 227
            RNKFKKIEMPVFTGEDPDSWLFRAERYFQIHKLTDSEKMLVSTISFDGPALNWFRSQEER
Sbjct: 121  RNKFKKIEMPVFTGEDPDSWLFRAERYFQIHKLTDSEKMLVSTISFDGPALNWFRSQEER 180

Query: 228  DKFTNWSNMKERLLIRFRSNKDGTLSGQFLRIKQEGTVEEYINLFDKMVAPVNDLPERVI 287
            DKFT+WSNMKERLLIRFRSNKDGTLSGQFLRIKQEGTVEEYINLFDKMVAPVNDLPERVI
Sbjct: 181  DKFTSWSNMKERLLIRFRSNKDGTLSGQFLRIKQEGTVEEYINLFDKMVAPVNDLPERVI 240

Query: 288  LDTFMNGLLPWVRSEVFFCRPKSLAEMMEAAQMVENREIARIEAKMSGYSGGRLTANNNA 347
            LDTFMNGLLPWVR+EVFFCRPKSLAEMMEAAQMVENREIARIEAKMSGYSGGRLTANNNA
Sbjct: 241  LDTFMNGLLPWVRTEVFFCRPKSLAEMMEAAQMVENREIARIEAKMSGYSGGRLTANNNA 300

Query: 348  VGKTSTGAIAGDNKNNTVFPIRTITLRSSVPNENRREGTYKRLPDAEFQARKEKGLCFRC 407
            VGKTSTGAIAGDNKNNTVFPIRTITLRSSVPNENRREGTYKRLPDAEFQARKEKGLCFRC
Sbjct: 301  VGKTSTGAIAGDNKNNTVFPIRTITLRSSVPNENRREGTYKRLPDAEFQARKEKGLCFRC 360

Query: 408  NEKYSADHKCRLREQRELRMFVVTDDRDEYEIVEEENERKELSCIELKEDVTTVVELSIN 467
            NEKYSADHKCRLREQRELRMFVVTDDRDEYEIVEEENER+ELSCIELKEDVTTVVELSIN
Sbjct: 361  NEKYSADHKCRLREQRELRMFVVTDDRDEYEIVEEENERRELSCIELKEDVTTVVELSIN 420

Query: 468  SVVGLNDP---------------------------------------------------- 527
            SVVGLNDP                                                    
Sbjct: 421  SVVGLNDPGTMKVRGKLCGEEVVVLIDCGATHNFVSEKLVKKLSLPIKETSHYGVILGSG 480

Query: 528  ------------------------------------------------------------ 587
                                                                        
Sbjct: 481  AAVQGKGVCEKLEVQIGGWKIVEDFLPLELGGVDVILGMQWLYSLGVTTVDWKNLSMTFI 540

Query: 588  ---------------------------------------------TLEENEHGLFRRS-- 647
                                                         TLEENEH  F     
Sbjct: 541  ADGKEVKIKGDPSLTKARISLKKLIKNWEDKDTGYLIECRSLQVKTLEENEHSWFSTEAV 600

Query: 648  EQGVSEGPISSVIEQFS-MFLIGREVTTSKEIEHHIHLKE------------------EL 707
             + VSEGPISSVIEQFS +F    ++   +EIEHHIHLKE                  E+
Sbjct: 601  SKAVSEGPISSVIEQFSDVFDWPEKLPPRREIEHHIHLKEGTNPINVRPYRYGFHQKEEM 660

Query: 708  IQLMCDHID--------------MVFTKKRRWRNYWRFCVDYRAVNNATIPDKFPIPVVE 767
             +L+ + ++              ++  KK+     WRFCVDYRAVNNATIPDKFPIPVVE
Sbjct: 661  EKLVREMLNSGVIRPSTSPYSSPVLLVKKKD--GSWRFCVDYRAVNNATIPDKFPIPVVE 720

Query: 768  ELFDELCGATLFSKIDLKSGYHQIRMVDEDVEKTAFRTHEGHYEFLVMPFGLTNAPATFQ 827
            ELFDELCGATLFSKIDLKSGYHQIRM DEDVEKTAFRTHEGHYEFLVMPFGLTNAPATFQ
Sbjct: 721  ELFDELCGATLFSKIDLKSGYHQIRMADEDVEKTAFRTHEGHYEFLVMPFGLTNAPATFQ 780

Query: 828  ALMNNIFKPFLRKFVLVFFDDILVYSRSEEEHELHMKKVLSLLRQNELYANQKKCHFAQK 887
            ALMNNIFKPFLRKFVLVFFDDILVYSRSEEEHELHMKKVLSLLRQNELYANQKKCHFAQK
Sbjct: 781  ALMNNIFKPFLRKFVLVFFDDILVYSRSEEEHELHMKKVLSLLRQNELYANQKKCHFAQK 840

Query: 888  KIEYLGHVISGEGVAVDPEKIRSISNWPQPTNVKEIRGFLGLTGYYRRFVQHYGTIAAPL 947
            KIEYLGHVISGEGVAVDPEKIRSISNWPQPTNVKEIRGFLGLTGYYRRFVQHYGTIAAPL
Sbjct: 841  KIEYLGHVISGEGVAVDPEKIRSISNWPQPTNVKEIRGFLGLTGYYRRFVQHYGTIAAPL 900

Query: 948  TQQLKKGGFHWNEEAMLAFERLKSAMIKLPVLALPDFSKQFEIEADASGYGVGAVLVQDG 1007
            TQQLKKGGFHWNEEA LAFERLKSAMIKLPVLALPDFSKQFEIEADASGYGVGAVLVQDG
Sbjct: 901  TQQLKKGGFHWNEEAKLAFERLKSAMIKLPVLALPDFSKQFEIEADASGYGVGAVLVQDG 960

Query: 1008 RPIAFYSHTLALRDRARPVYERELMAVVLAVQRWRPYLLIGKFKVKTDQKALKFLLDQRI 1067
            RPIAFYSHTLALRDRARPVYERELMAVVLAVQRWRPYLLIGKFKVKTDQKALKFLLDQRI
Sbjct: 961  RPIAFYSHTLALRDRARPVYERELMAVVLAVQRWRPYLLIGKFKVKTDQKALKFLLDQRI 1020

Query: 1068 IQPQYQKWIAKLLGYSFEVVYKPGVDNGAADALSRKPDGVQLFGLSIPITVDLEVIKKEV 1127
            IQPQYQKWIAKLLGYSFEVVYKPGVDNGAADALSRKPDGVQLFGLSIPITVDLEVIKKEV
Sbjct: 1021 IQPQYQKWIAKLLGYSFEVVYKPGVDNGAADALSRKPDGVQLFGLSIPITVDLEVIKKEV 1080

Query: 1128 YQDPKYEKIIKQLEQGEELSESNYSMRRGLLLYKNRL----------------------- 1187
            YQDPKYEKIIKQLEQGEEL+ESNYSMRRGLLLYKNRL                       
Sbjct: 1081 YQDPKYEKIIKQLEQGEELTESNYSMRRGLLLYKNRLVILKQSSLIPVILDTFHNSVVGG 1140

Query: 1188 ------------------------------------------------------------ 1214
                                                                        
Sbjct: 1141 HSGFLRTYKRAAAELFWEGMKADIKKHCEECLTCQRSKSLSLSPAGLLVPLEIPQAVWSD 1200

[Close]

BLAST of MELO.jh102112.1 vs. NCBI nr
Match: TYK20792.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 2042 bits (5290), Expect = 0.0
Identity = 1119/1546 (72.38%), Postives = 1138/1546 (73.61%), Query Frame = 0


Query: 48   MVQTRIEERLECIDQEIAGMKKELSKVPAIEMSLSEIAKSLELMRLQSEKQQQLLFTIVE 107
            MVQTRIEERLECIDQEIAGMKKELSKVPAIEMSLSEIAKSLELMRLQSEKQQQLLFTIVE
Sbjct: 1    MVQTRIEERLECIDQEIAGMKKELSKVPAIEMSLSEIAKSLELMRLQSEKQQQLLFTIVE 60

Query: 108  SNTKERSTMSRLETESAAKEFEKMKGKEDDASSSKAIDSGRNFGADRNDRRIDGDDGAAD 167
            SNTKERSTMSRLETESAAKEFEKMKGKEDDASSSKAIDSGRN GADRNDRRIDGDDGAAD
Sbjct: 61   SNTKERSTMSRLETESAAKEFEKMKGKEDDASSSKAIDSGRNCGADRNDRRIDGDDGAAD 120

Query: 168  RNKFKKIEMPVFTGEDPDSWLFRAERYFQIHKLTDSEKMLVSTISFDGPALNWFRSQEER 227
            RNKFKKIEMPVFTGEDPDSWLFRAERYFQIHKLTDSEKMLVSTISFDGPALNWFRSQEER
Sbjct: 121  RNKFKKIEMPVFTGEDPDSWLFRAERYFQIHKLTDSEKMLVSTISFDGPALNWFRSQEER 180

Query: 228  DKFTNWSNMKERLLIRFRSNKDGTLSGQFLRIKQEGTVEEYINLFDKMVAPVNDLPERVI 287
            DKFT+WSNMKERLLIRFRSNKDGTLSGQFLRIKQEGTVEEYINLFDKMVAPVNDLPERVI
Sbjct: 181  DKFTSWSNMKERLLIRFRSNKDGTLSGQFLRIKQEGTVEEYINLFDKMVAPVNDLPERVI 240

Query: 288  LDTFMNGLLPWVRSEVFFCRPKSLAEMMEAAQMVENREIARIEAKMSGYSGGRLTANNNA 347
            LDTFMNGLLPWVRSEVFFCRPKSLAEMMEAAQMVENREIAR EAKMSGYSGG+LTANNN 
Sbjct: 241  LDTFMNGLLPWVRSEVFFCRPKSLAEMMEAAQMVENREIARTEAKMSGYSGGKLTANNNV 300

Query: 348  VGKTSTGAIAGDNKNNTVFPIRTITLRSSVPNENRREGTYKRLPDAEFQARKEKGLCFRC 407
            VGKTSTGAIAGDNKNNTVFPIRTITLRSSVPNENRREGTYKRLPDAEFQARKEKGLCFRC
Sbjct: 301  VGKTSTGAIAGDNKNNTVFPIRTITLRSSVPNENRREGTYKRLPDAEFQARKEKGLCFRC 360

Query: 408  NEKYSADHKCRLREQRELRMFVVTDDRDEYEIVEEENERKELSCIELKEDVTTVVELSIN 467
            NEKYSADHKCRLREQRELRMFVVT +RDEYEIVEEENER+ELSCIELKEDVTTVVELSIN
Sbjct: 361  NEKYSADHKCRLREQRELRMFVVTAERDEYEIVEEENERRELSCIELKEDVTTVVELSIN 420

Query: 468  SVVGLNDP---------------------------------------------------- 527
            SVVGLNDP                                                    
Sbjct: 421  SVVGLNDPGTMKVRGKLCGEEVVILIDCGATHNFVSEKLVKKLSLPIKETSHYGVILGSG 480

Query: 528  ------------------------------------------------------------ 587
                                                                        
Sbjct: 481  AAVQGKGVCEKLEVQMGGWKIVEDFLPLELGGVDVILGMQWLYSLGVTTVDWKNLSMTFI 540

Query: 588  ---------------------------------------------TLEENEHGLFRRS-- 647
                                                         TLEENEH LF     
Sbjct: 541  ADGKEVKIKGDPSLTKARISLKKLIKNWEDKDTGYLIECRSLQVKTLEENEHSLFSTEAV 600

Query: 648  EQGVSEGPISSVIEQFS-MFLIGREVTTSKEIEHHIHLKE------------------EL 707
             + VSEGPISSVIEQFS +F    ++   +EIEHHIHLKE                  E+
Sbjct: 601  SKAVSEGPISSVIEQFSDVFEWPEKLPPRREIEHHIHLKEGTNPINVRPYRYGFHQKEEM 660

Query: 708  IQLMCDHID--------------MVFTKKRRWRNYWRFCVDYRAVNNATIPDKFPIPVVE 767
             +L+ + ++              ++  KK+     WRFCVDYRAVNNATIPDKFPIPVVE
Sbjct: 661  EKLVKEMLNSGVIRPSTSPYSSPVLLVKKKD--GSWRFCVDYRAVNNATIPDKFPIPVVE 720

Query: 768  ELFDELCGATLFSKIDLKSGYHQIRMVDEDVEKTAFRTHEGHYEFLVMPFGLTNAPATFQ 827
            ELFDELCGATLFSKIDLKSGYHQIRMVDEDVEKTAFRTHEGHYEFLVMPFGLTNAPATFQ
Sbjct: 721  ELFDELCGATLFSKIDLKSGYHQIRMVDEDVEKTAFRTHEGHYEFLVMPFGLTNAPATFQ 780

Query: 828  ALMNNIFKPFLRKFVLVFFDDILVYSRSEEEHELHMKKVLSLLRQNELYANQKKCHFAQK 887
            ALMNNIFKPFLRKFVLVFFDDILVYSRSEEEHELHMKKVLSLLRQNELYANQKKCHFAQK
Sbjct: 781  ALMNNIFKPFLRKFVLVFFDDILVYSRSEEEHELHMKKVLSLLRQNELYANQKKCHFAQK 840

Query: 888  KIEYLGHVISGEGVAVDPEKIRSISNWPQPTNVKEIRGFLGLTGYYRRFVQHYGTIAAPL 947
            KIEYLGHVISGEGVAVDPEKIRSISNWPQPTNVKEIRGFLGLTGYYRRFVQHYGTIAAPL
Sbjct: 841  KIEYLGHVISGEGVAVDPEKIRSISNWPQPTNVKEIRGFLGLTGYYRRFVQHYGTIAAPL 900

Query: 948  TQQLKKGGFHWNEEAMLAFERLKSAMIKLPVLALPDFSKQFEIEADASGYGVGAVLVQDG 1007
            TQQLKKGGFHWNEEA LAFERLKSAMIKLPVLALPDFSKQFEIEADASGYGVGAVLVQDG
Sbjct: 901  TQQLKKGGFHWNEEAKLAFERLKSAMIKLPVLALPDFSKQFEIEADASGYGVGAVLVQDG 960

Query: 1008 RPIAFYSHTLALRDRARPVYERELMAVVLAVQRWRPYLLIGKFKVKTDQKALKFLLDQRI 1067
            RPIAFYSHTLALRDRARPVYERELMAVVLAVQRWRPYLLIGKFKVKTDQKALKFLLDQRI
Sbjct: 961  RPIAFYSHTLALRDRARPVYERELMAVVLAVQRWRPYLLIGKFKVKTDQKALKFLLDQRI 1020

Query: 1068 IQPQYQKWIAKLLGYSFEVVYKPGVDNGAADALSRKPDGVQLFGLSIPITVDLEVIKKEV 1127
            IQPQYQKWIAKLLGYSFEVVYKPGVDNGAADALSRKPDGVQLFGLSIPITVDLEVIKKEV
Sbjct: 1021 IQPQYQKWIAKLLGYSFEVVYKPGVDNGAADALSRKPDGVQLFGLSIPITVDLEVIKKEV 1080

Query: 1128 YQDPKYEKIIKQLEQGEELSESNYSMRRGLLLYKNRL----------------------- 1187
            YQDPKYEKIIKQLEQGEEL+ESNYSMRRGLLLYKNRL                       
Sbjct: 1081 YQDPKYEKIIKQLEQGEELTESNYSMRRGLLLYKNRLVILKQSSLIPVILDTFHNSVVGG 1140

Query: 1188 ------------------------------------------------------------ 1214
                                                                        
Sbjct: 1141 HSGFLRTYKRAAAELFWEGMKADIKKHCEECLTCQRSKSLSLSPAGLLVPLEIPQAVWSD 1200

[Close]

BLAST of MELO.jh102112.1 vs. NCBI nr
Match: KAA0044875.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 1982 bits (5134), Expect = 0.0
Identity = 1087/1546 (70.31%), Postives = 1122/1546 (72.57%), Query Frame = 0


Query: 48   MVQTRIEERLECIDQEIAGMKKELSKVPAIEMSLSEIAKSLELMRLQSEKQQQLLFTIVE 107
            MVQTRIEERLECIDQEIAGMKKELSKVPAIEMSLSEIAKSLELMRLQSEKQQQLLFTIVE
Sbjct: 1    MVQTRIEERLECIDQEIAGMKKELSKVPAIEMSLSEIAKSLELMRLQSEKQQQLLFTIVE 60

Query: 108  SNTKERSTMSRLETESAAKEFEKMKGKEDDASSSKAIDSGRNFGADRNDRRIDGDDGAAD 167
            SNTKERSTMSRLETESAAKEFEKMKGKEDDASSSKAI+SGRNFGADRNDRRID DDGAAD
Sbjct: 61   SNTKERSTMSRLETESAAKEFEKMKGKEDDASSSKAIESGRNFGADRNDRRIDSDDGAAD 120

Query: 168  RNKFKKIEMPVFTGEDPDSWLFRAERYFQIHKLTDSEKMLVSTISFDGPALNWFRSQEER 227
            RNKFKKIEMPVFTGEDPDSWLFRAERYFQIHKLTDSEKMLVSTISFDGPALNWFRSQEER
Sbjct: 121  RNKFKKIEMPVFTGEDPDSWLFRAERYFQIHKLTDSEKMLVSTISFDGPALNWFRSQEER 180

Query: 228  DKFTNWSNMKERLLIRFRSNKDGTLSGQFLRIKQEGTVEEYINLFDKMVAPVNDLPERVI 287
            DKFT+WSNMKERLLIRFRSNKDGTLSGQFLRIKQEGTVEEYINLFDKMVAPVNDLPERVI
Sbjct: 181  DKFTSWSNMKERLLIRFRSNKDGTLSGQFLRIKQEGTVEEYINLFDKMVAPVNDLPERVI 240

Query: 288  LDTFMNGLLPWVRSEVFFCRPKSLAEMMEAAQMVENREIARIEAKMSGYSGGRLTANNNA 347
            LDTFMNGLLPWVRSEVFFCRPKSLAEMMEAAQ+VENREIAR+EAKMSGYSGG+L+ NNN 
Sbjct: 241  LDTFMNGLLPWVRSEVFFCRPKSLAEMMEAAQLVENREIARVEAKMSGYSGGKLSVNNNV 300

Query: 348  VGKTSTGAIAGDNKNNTVFPIRTITLRSSVPNENRREGTYKRLPDAEFQARKEKGLCFRC 407
            VGK S GA+AGDNKNNTVFPIRTITLRSSVPNENRREGTYKRLPDAEFQARKEKGLCFRC
Sbjct: 301  VGKASIGAVAGDNKNNTVFPIRTITLRSSVPNENRREGTYKRLPDAEFQARKEKGLCFRC 360

Query: 408  NEKYSADHKCRLREQRELRMFVVTDDRDEYEIVEEENERKELSCIELKEDVTTVVELSIN 467
            NEKYSADHKC+LREQRELRMFVVT +RDEYEIVEEENER EL+CIELKEDV TVVELSIN
Sbjct: 361  NEKYSADHKCKLREQRELRMFVVTAERDEYEIVEEENERTELNCIELKEDVATVVELSIN 420

Query: 468  SVVGLNDP---------------------------------------------------- 527
            SVVGLNDP                                                    
Sbjct: 421  SVVGLNDPGTMKVRGKLFGEEVVILIDCGATHNFVSEKLVKKLSLSIKETSHYGVILGSG 480

Query: 528  ------------------------------------------------------------ 587
                                                                        
Sbjct: 481  AAVQGKGVCEKLEVQMSGWKIVEDFLPLELGGVDVILGMQWLYSLGVTTVDWKNLSMTFI 540

Query: 588  ---------------------------------------------TLEENEHGLFRRS-- 647
                                                          LE NE+ LF     
Sbjct: 541  ADGKEVKIKGDPSLTKARISLKKLIKNWEDKDTGYLIECRSLQVKLLEGNEYSLFSTEAV 600

Query: 648  EQGVSEGPISSVIEQFS-MFLIGREVTTSKEIEHHIHLKE------------------EL 707
               +S+G ISSVI+QF  +F    ++   + IEHHIHLKE                  E+
Sbjct: 601  SNALSDGSISSVIKQFQDVFEWPEKLPPRRGIEHHIHLKEGTNPINVRPYRYGFHQKEEM 660

Query: 708  IQLMCDHID--------------MVFTKKRRWRNYWRFCVDYRAVNNATIPDKFPIPVVE 767
             +L+ + ++              ++  KK+     WRFCVDYRAVNNATIPDKFPIPVVE
Sbjct: 661  EKLVKEMLNSGVIRPSTSPYSSPVLLVKKKD--GSWRFCVDYRAVNNATIPDKFPIPVVE 720

Query: 768  ELFDELCGATLFSKIDLKSGYHQIRMVDEDVEKTAFRTHEGHYEFLVMPFGLTNAPATFQ 827
            ELFDEL GA LFSKIDLKSGYHQIRMVDEDVEKTAFRTHEGHYEFLVMPFGLTNAPATFQ
Sbjct: 721  ELFDELGGAILFSKIDLKSGYHQIRMVDEDVEKTAFRTHEGHYEFLVMPFGLTNAPATFQ 780

Query: 828  ALMNNIFKPFLRKFVLVFFDDILVYSRSEEEHELHMKKVLSLLRQNELYANQKKCHFAQK 887
            ALMNNIFKPFLRKFVLVFFDDILVYSRSEEEHE HMKKVLSLLRQNELYANQKKCHFAQK
Sbjct: 781  ALMNNIFKPFLRKFVLVFFDDILVYSRSEEEHEFHMKKVLSLLRQNELYANQKKCHFAQK 840

Query: 888  KIEYLGHVISGEGVAVDPEKIRSISNWPQPTNVKEIRGFLGLTGYYRRFVQHYGTIAAPL 947
            KIEYLGHVISGEGVAVDPEKIRSISNWPQPTNVKEIRGFLGLTGYYRRFV++YGTIAAPL
Sbjct: 841  KIEYLGHVISGEGVAVDPEKIRSISNWPQPTNVKEIRGFLGLTGYYRRFVRNYGTIAAPL 900

Query: 948  TQQLKKGGFHWNEEAMLAFERLKSAMIKLPVLALPDFSKQFEIEADASGYGVGAVLVQDG 1007
            TQQLKKGGFHWNEEA LAFERLKSAMI LPVLALPDFSKQFEIEADASGYGVGAVLVQDG
Sbjct: 901  TQQLKKGGFHWNEEATLAFERLKSAMITLPVLALPDFSKQFEIEADASGYGVGAVLVQDG 960

Query: 1008 RPIAFYSHTLALRDRARPVYERELMAVVLAVQRWRPYLLIGKFKVKTDQKALKFLLDQRI 1067
            RPIAFYSHTLALRDRARPVYERELMAVVLAVQRWRPYLLIGKFKVKTDQKALKFLLDQRI
Sbjct: 961  RPIAFYSHTLALRDRARPVYERELMAVVLAVQRWRPYLLIGKFKVKTDQKALKFLLDQRI 1020

Query: 1068 IQPQYQKWIAKLLGYSFEVVYKPGVDNGAADALSRKPDGVQLFGLSIPITVDLEVIKKEV 1127
            IQPQYQKWIAKLLGYSFEVVYKPGVDNGAADALSRKPDGVQLFGLSIPITVDLEVIKKEV
Sbjct: 1021 IQPQYQKWIAKLLGYSFEVVYKPGVDNGAADALSRKPDGVQLFGLSIPITVDLEVIKKEV 1080

Query: 1128 YQDPKYEKIIKQLEQGEELSESNYSMRRGLLLYKNRL----------------------- 1187
            YQDPKYEKIIKQLEQGEEL+E+NYSM+RGLL+YKNRL                       
Sbjct: 1081 YQDPKYEKIIKQLEQGEELAENNYSMQRGLLMYKNRLVILKQSSLIPVILDTFHNSVVGG 1140

Query: 1188 ------------------------------------------------------------ 1214
                                                                        
Sbjct: 1141 HSGFLRTYKRAAAELFWEGMKTDIKKHCEECLTCQRSKSLALSPAGLLVPLEIPQAVWSD 1200

[Close]

BLAST of MELO.jh102112.1 vs. NCBI nr
Match: TYK06640.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK10078.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK24527.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 1800 bits (4661), Expect = 0.0
Identity = 972/1544 (62.95%), Postives = 1076/1544 (69.69%), Query Frame = 0


Query: 48   MVQTRIEERLECIDQEIAGMKKELSKVPAIEMSLSEIAKSLELMRLQSEKQQQLLFTIVE 107
            MVQTRIEERLECIDQEIAGMKKELSKVPAIE+SL+EIAKS+ELMRLQSEKQQQLLFTI+E
Sbjct: 1    MVQTRIEERLECIDQEIAGMKKELSKVPAIEISLNEIAKSIELMRLQSEKQQQLLFTIIE 60

Query: 108  SNTKERSTMSRLETESAAKEFEKMKGKEDDASSSKAIDSGRNFGADRNDRRIDGDDGAAD 167
            +NT ERST S + TE+AAKEFEK KGKE DASSS+  ++ RN   + N+RR DGD+   D
Sbjct: 61   TNTMERSTTSGIVTETAAKEFEKAKGKEGDASSSRMTEADRNLRPNGNERRSDGDESFQD 120

Query: 168  RNKFKKIEMPVFTGEDPDSWLFRAERYFQIHKLTDSEKMLVSTISFDGPALNWFRSQEER 227
            RNKFKKIEMPVFTGEDPDSWLFRAERYFQIHKLTDSEKMLVST+SFDGPALNWFRSQEER
Sbjct: 121  RNKFKKIEMPVFTGEDPDSWLFRAERYFQIHKLTDSEKMLVSTVSFDGPALNWFRSQEER 180

Query: 228  DKFTNWSNMKERLLIRFRSNKDGTLSGQFLRIKQEGTVEEYINLFDKMVAPVNDLPERVI 287
            DKFT+W+NMKERLL+RFRSNKDGT+SGQFLRIKQEGTVEEYINLFDKMVAPVNDLPERVI
Sbjct: 181  DKFTSWANMKERLLVRFRSNKDGTISGQFLRIKQEGTVEEYINLFDKMVAPVNDLPERVI 240

Query: 288  LDTFMNGLLPWVRSEVFFCRPKSLAEMMEAAQMVENREIARIEAKMSGYSGGRLTANNNA 347
            LDTFMNGLLPWVRSEVFFCRPKSLAEMME AQMVENREIAR EAKM GYSGG++   N+ 
Sbjct: 241  LDTFMNGLLPWVRSEVFFCRPKSLAEMMEVAQMVENREIARTEAKMCGYSGGKIAGQNSV 300

Query: 348  VGKTSTGAIAGDNKNNTVFPIRTITLRSSVPNENRREGTYKRLPDAEFQARKEKGLCFRC 407
            VGKTSTG +AGDNKNNTVFPIRTITLRSSVPNENRREG+YKRLPDAEFQARKEKGLCFRC
Sbjct: 301  VGKTSTGGVAGDNKNNTVFPIRTITLRSSVPNENRREGSYKRLPDAEFQARKEKGLCFRC 360

Query: 408  NEKYSADHKCRLREQRELRMFVVTDDRDEYEIVEEENERKELSCIELKEDVTTVVELSIN 467
            NEKYSADHKCR++EQRELRMFVVT+ R+EYEIVE+E E KEL C+E+ E++TTVVELSIN
Sbjct: 361  NEKYSADHKCRMKEQRELRMFVVTEGREEYEIVEDEKEEKELGCMEINENLTTVVELSIN 420

Query: 468  SVVGLNDP---------------------------------------------------- 527
            SVVGLNDP                                                    
Sbjct: 421  SVVGLNDPGTMKVRGKLLGEEVVILIDCGATHNFVSEKLVRKLSLPIKETSHYGVILGSG 480

Query: 528  ------------------------------------------------------------ 587
                                                                        
Sbjct: 481  AAVQGKGVCEKLEVQLKDWKIVEDFLPLELGGVDVILGMQWLYSLGVTTVDWKNLSLSFM 540

Query: 588  ---------------------------------------------TLEENEHGLFRRSEQ 647
                                                         T+E++EH L     +
Sbjct: 541  AEGKEVNIKGDPSLTKARISLKNMIKNWEEKDSGFLIECRSLQVRTVEDDEHYLLNTEVE 600

Query: 648  GVSEGPISSVIEQF-SMFLIGREVTTSKEIEHHIHLKE---------------------E 707
              S+G I SVI+QF  +F    ++   +EIEHHIHLKE                     +
Sbjct: 601  --SKGRIGSVIKQFRDVFEWPEKLPPRREIEHHIHLKEGTNPINVRPYRYGFHQKEEMEK 660

Query: 708  LIQLMCDH-----------IDMVFTKKRRWRNYWRFCVDYRAVNNATIPDKFPIPVVEEL 767
            L+Q M +              ++  KK+     WRFCVDYRAVNNATIPDKFPIPVVEEL
Sbjct: 661  LVQEMLNSGVIRPSISPYSSPVLLVKKKD--GSWRFCVDYRAVNNATIPDKFPIPVVEEL 720

Query: 768  FDELCGATLFSKIDLKSGYHQIRMVDEDVEKTAFRTHEGHYEFLVMPFGLTNAPATFQAL 827
            FDELCGATLFSKIDLKSGYHQIRM DED+EKTAFRTHEGHYEFLVMPFGLTNAPATFQAL
Sbjct: 721  FDELCGATLFSKIDLKSGYHQIRMADEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQAL 780

Query: 828  MNNIFKPFLRKFVLVFFDDILVYSRSEEEHELHMKKVLSLLRQNELYANQKKCHFAQKKI 887
            MNNIFKPFLRKFVLVFFDDILVYSR+EEEHE+HM+KVL++LR +EL+ANQKKCHFAQ+KI
Sbjct: 781  MNNIFKPFLRKFVLVFFDDILVYSRNEEEHEVHMRKVLAVLRHHELFANQKKCHFAQQKI 840

Query: 888  EYLGHVISGEGVAVDPEKIRSISNWPQPTNVKEIRGFLGLTGYYRRFVQHYGTIAAPLTQ 947
            EYLGHVISGEGVAVDPEKI++IS+WPQPTNVKE RGFLGLTGYYRRFV+HYGTIAAPLTQ
Sbjct: 841  EYLGHVISGEGVAVDPEKIKAISDWPQPTNVKETRGFLGLTGYYRRFVRHYGTIAAPLTQ 900

Query: 948  QLKKGGFHWNEEAMLAFERLKSAMIKLPVLALPDFSKQFEIEADASGYGVGAVLVQDGRP 1007
             LKKGGF+W EEA LAF RLKSAM+ LPVLALPDFSKQFEIEADASGYGVGAVLVQD RP
Sbjct: 901  LLKKGGFYWTEEATLAFNRLKSAMMSLPVLALPDFSKQFEIEADASGYGVGAVLVQDKRP 960

Query: 1008 IAFYSHTLALRDRARPVYERELMAVVLAVQRWRPYLLIGKFKVKTDQKALKFLLDQRIIQ 1067
            +A+YSHTLALRDR+RPVYERELMAVVLAVQRWRPYLLIGKF+VKTDQKALKFLLDQRIIQ
Sbjct: 961  VAYYSHTLALRDRSRPVYERELMAVVLAVQRWRPYLLIGKFRVKTDQKALKFLLDQRIIQ 1020

Query: 1068 PQYQKWIAKLLGYSFEVVYKPGVDNGAADALSRKPDGVQLFGLSIPITVDLEVIKKEVYQ 1127
            PQYQKWIAKLLGYSFEVVYKPGV+N AADALSRKP+ VQL+GLSIPI VDLE++KKEV Q
Sbjct: 1021 PQYQKWIAKLLGYSFEVVYKPGVENRAADALSRKPEEVQLYGLSIPIAVDLEIVKKEVLQ 1080

Query: 1128 DPKYEKIIKQLEQGEELSESNYSMRRGLLLYKNRL------------------------- 1187
            DPKYEKII+Q+EQGEEL  ++YS+++GLL++KNRL                         
Sbjct: 1081 DPKYEKIIRQIEQGEELEVNDYSLKKGLLMFKNRLVILKQSSLIPVILDTFHNSAIGGHS 1140

Query: 1188 ------------------------------------------------------------ 1214
                                                                        
Sbjct: 1141 GFLRTYKRIAAELYWMGMKADIKKHCEECLVCQRSKTLALSPAGLLVPLEIPQAIWSDIS 1200

[Close]

BLAST of MELO.jh102112.1 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 8.2e-84
Identity = 159/364 (43.68%), Postives = 232/364 (63.74%), Query Frame = 0


Query: 549 NYWRFCVDYRAVNNATIPDKFPIPVVEELFDELCGATLFSKIDLKSGYHQIRMVDEDVEK 608
           N +R  +DYR +N  TIPD++PIP ++E+  +L     F+ IDL  G+HQI M +E + K
Sbjct: 259 NKYRVVIDYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISK 318

Query: 609 TAFRTHEGHYEFLVMPFGLTNAPATFQALMNNIFKPFLRKFVLVFFDDILVYSRSEEEHE 668
           TAF T  GHYE+L MPFGL NAPATFQ  MNNI +P L K  LV+ DDI+++S S  EH 
Sbjct: 319 TAFSTKSGHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHL 378

Query: 669 LHMKKVLSLLRQNELYANQKKCHFAQKKIEYLGHVISGEGVAVDPEKIRSISNWPQPTNV 728
             ++ V + L    L     KC F +K+  +LGH+++ +G+  +P K+++I ++P PT  
Sbjct: 379 NSIQLVFTKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKD 438

Query: 729 KEIRGFLGLTGYYRRFVQHYGTIAAPLTQQLKKGGFHWNE--EAMLAFERLKSAMIKLPV 788
           KEIR FLGLTGYYR+F+ +Y  IA P+T  LKK      +  E + AFE+LK+ +I+ P+
Sbjct: 439 KEIRAFLGLTGYYRKFIPNYADIAKPMTSCLKKRTKIDTQKLEYIEAFEKLKALIIRDPI 498

Query: 789 LALPDFSKQFEIEADASGYGVGAVLVQDGRPIAFYSHTLALRDRARPVYERELMAVVLAV 848
           L LPDF K+F +  DAS   +GAVL Q+G PI+F S TL   +      E+EL+A+V A 
Sbjct: 499 LQLPDFEKKFVLTTDASNLALGAVLSQNGHPISFISRTLNDHELNYSAIEKELLAIVWAT 558

Query: 849 QRWRPYLLIGKFKVKTDQKALKFLLDQRIIQPQYQKWIAKLLGYSFEVVYKPGVDNGAAD 908
           + +R YLL  +F + +D + L++L + +    + ++W  +L  Y F++ Y  G +N  AD
Sbjct: 559 KTFRHYLLGRQFLIASDHQPLRWLHNLKEPGAKLERWRVRLSEYQFKIDYIKGKENSVAD 618

Query: 909 ALSR 911
           ALSR
Sbjct: 619 ALSR 622

[Close]

BLAST of MELO.jh102112.1 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 1.6e-79
Identity = 154/362 (42.54%), Postives = 223/362 (61.60%), Query Frame = 0


Query: 551 WRFCVDYRAVNNATIPDKFPIPVVEELFDELCGATLFSKIDLKSGYHQIRMVDEDVEKTA 610
           +R  +DYR +N  T+ D+ PIP ++E+  +L     F+ IDL  G+HQI M  E V KTA
Sbjct: 262 FRIVIDYRKLNEITVGDRHPIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTA 321

Query: 611 FRTHEGHYEFLVMPFGLTNAPATFQALMNNIFKPFLRKFVLVFFDDILVYSRSEEEHELH 670
           F T  GHYE+L MPFGL NAPATFQ  MN+I +P L K  LV+ DDI+V+S S +EH   
Sbjct: 322 FSTKHGHYEYLRMPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQS 381

Query: 671 MKKVLSLLRQNELYANQKKCHFAQKKIEYLGHVISGEGVAVDPEKIRSISNWPQPTNVKE 730
           +  V   L +  L     KC F +++  +LGHV++ +G+  +PEKI +I  +P PT  KE
Sbjct: 382 LGLVFEKLAKANLKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKE 441

Query: 731 IRGFLGLTGYYRRFVQHYGTIAAPLTQQLKKGG--FHWNEEAMLAFERLKSAMIKLPVLA 790
           I+ FLGLTGYYR+F+ ++  IA P+T+ LKK       N E   AF++LK  + + P+L 
Sbjct: 442 IKAFLGLTGYYRKFIPNFADIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILK 501

Query: 791 LPDFSKQFEIEADASGYGVGAVLVQDGRPIAFYSHTLALRDRARPVYERELMAVVLAVQR 850
           +PDF+K+F +  DAS   +GAVL QDG P+++ S TL   +      E+EL+A+V A + 
Sbjct: 502 VPDFTKKFTLTTDASDVALGAVLSQDGHPLSYISRTLNEHEINYSTIEKELLAIVWATKT 561

Query: 851 WRPYLLIGKFKVKTDQKALKFLLDQRIIQPQYQKWIAKLLGYSFEVVYKPGVDNGAADAL 910
           +R YLL   F++ +D + L +L   +    +  +W  KL  + F++ Y  G +N  ADAL
Sbjct: 562 FRHYLLGRHFEISSDHQPLSWLYRMKDPNSKLTRWRVKLSEFDFDIKYIKGKENCVADAL 621

[Close]

BLAST of MELO.jh102112.1 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 6.7e-78
Identity = 150/379 (39.58%), Postives = 225/379 (59.37%), Query Frame = 0


Query: 551 WRFCVDYRAVNNATIPDKFPIPVVEELFDELCGATLFSKIDLKSGYHQIRMVDEDVEKTA 610
           +R  VD++ +N  TIPD +PIP +      L  A  F+ +DL SG+HQI M + D+ KTA
Sbjct: 178 YRMVVDFKRLNTVTIPDTYPIPDINATLASLGNAKYFTTLDLTSGFHQIHMKESDIPKTA 237

Query: 611 FRTHEGHYEFLVMPFGLTNAPATFQALMNNIFKPFLRKFVLVFFDDILVYSRSEEEHELH 670
           F T  G YEFL +PFGL NAPA FQ ++++I +  + K   V+ DDI+V+S   + H  +
Sbjct: 238 FSTLNGKYEFLRLPFGLKNAPAIFQRMIDDILREHIGKVCYVYIDDIIVFSEDYDTHWKN 297

Query: 671 MKKVLSLLRQNELYANQKKCHFAQKKIEYLGHVISGEGVAVDPEKIRSISNWPQPTNVKE 730
           ++ VL+ L +  L  N +K HF   ++E+LG++++ +G+  DP+K+R+IS  P PT+VKE
Sbjct: 298 LRLVLASLSKANLQVNLEKSHFLDTQVEFLGYIVTADGIKADPKKVRAISEMPPPTSVKE 357

Query: 731 IRGFLGLTGYYRRFVQHYGTIAAPLT------------QQLKKGGFHWNEEAMLAFERLK 790
           ++ FLG+T YYR+F+Q Y  +A PLT             Q  K     +E A+ +F  LK
Sbjct: 358 LKRFLGMTSYYRKFIQDYAKVAKPLTNLTRGLYANIKSSQSSKVPITLDETALQSFNDLK 417

Query: 791 SAMIKLPVLALPDFSKQFEIEADASGYGVGAVLVQD----GRPIAFYSHTLALRDRARPV 850
           S +    +LA P F+K F +  DAS + +GAVL QD     RPIA+ S +L   +     
Sbjct: 418 SILCSSEILAFPCFTKPFHLTTDASNWAIGAVLSQDDQGRDRPIAYISRSLNKTEENYAT 477

Query: 851 YERELMAVVLAVQRWRPYLL-IGKFKVKTDQKALKFLLDQRIIQPQYQKWIAKLLGYSFE 910
            E+E++A++ ++   R YL   G  KV TD + L F L  R    + ++W A++  Y+ E
Sbjct: 478 IEKEMLAIIWSLDNLRAYLYGAGTIKVYTDHQPLTFALGNRNFNAKLKRWKARIEEYNCE 537

Query: 911 VVYKPGVDNGAADALSRKP 913
           ++YKPG  N  ADALSR P
Sbjct: 538 LIYKPGKSNVVADALSRIP 556

[Close]

BLAST of MELO.jh102112.1 vs. ExPASy Swiss-Prot
Match: P10401 (Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 8.8e-70
Identity = 149/437 (34.10%), Postives = 242/437 (55.38%), Query Frame = 0


Query: 552 RFCVDYRAVNNATIPDKFPIPVVEELFDELCGATLFSKIDLKSGYHQIRMVDEDVEKTAF 611
           R  +D+R +N  TIPD++P+P +  +   L  A  F+ +DLKSGYHQI + + D EKT+F
Sbjct: 238 RLVIDFRKLNEKTIPDRYPMPSIPMILANLGKAKFFTTLDLKSGYHQIYLAEHDREKTSF 297

Query: 612 RTHEGHYEFLVMPFGLTNAPATFQALMNNIFKPFLRKFVLVFFDDILVYSRSEEEHELHM 671
             + G YEF  +PFGL NA + FQ  ++++ +  + K   V+ DD++++S +E +H  H+
Sbjct: 298 SVNGGKYEFCRLPFGLRNASSIFQRALDDVLREQIGKICYVYVDDVIIFSENESDHVRHI 357

Query: 672 KKVLSLLRQNELYANQKKCHFAQKKIEYLGHVISGEGVAVDPEKIRSISNWPQPTNVKEI 731
             VL  L    +  +Q+K  F ++ +EYLG ++S +G   DPEK+++I  +P+P  V ++
Sbjct: 358 DTVLKCLIDANMRVSQEKTRFFKESVEYLGFIVSKDGTKSDPEKVKAIQEYPEPDCVYKV 417

Query: 732 RGFLGLTGYYRRFVQHYGTIAAPLTQQL------------KKGGFHWNEEAMLAFERLKS 791
           R FLGL  YYR F++ +  IA P+T  L            KK    +NE    AF+RL++
Sbjct: 418 RSFLGLASYYRVFIKDFAAIARPITDILKGENGSVSKHMSKKIPVEFNETQRNAFQRLRN 477

Query: 792 AMIKLPV-LALPDFSKQFEIEADASGYGVGAVLVQDGRPIAFYSHTLALRDRARPVYERE 851
            +    V L  PDF K F++  DAS  G+GAVL Q+GRPI   S TL   ++     ERE
Sbjct: 478 ILASEDVILKYPDFKKPFDLTTDASASGIGAVLSQEGRPITMISRTLKQPEQNYATNERE 537

Query: 852 LMAVVLAVQRWRPYLLIGK-FKVKTDQKALKFLLDQRIIQPQYQKWIAKLLGYSFEVVYK 911
           L+A+V A+ + + +L   +   + TD + L F +  R    + ++W + +  ++ +V YK
Sbjct: 538 LLAIVWALGKLQNFLYGSREINIFTDHQPLTFAVADRNTNAKIKRWKSYIDQHNAKVFYK 597

Query: 912 PGVDNGAADALSRKPDGVQLFGLSIPITVDLEVIKKEV---YQDPKYEKIIKQLEQGEEL 971
           PG +N  ADALSR+     L  L      D   I  E+   Y     +K +        L
Sbjct: 598 PGKENFVADALSRQ----NLNALQNEPQSDAATIHSELSLTYTVETTDKPLNCFRNQIIL 657

[Close]

BLAST of MELO.jh102112.1 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 1.1e-67
Identity = 213/818 (26.04%), Postives = 326/818 (39.85%), Query Frame = 0


Query: 552  RFCVDYRAVNNATIPDKFPIPVVEELFDELCGATLFSKIDLKSGYHQIRMVDEDVEKTAF 611
            R  VDY+ +N    P+ +P+P++E+L  ++ G+T+F+K+DLKS YH IR+   D  K AF
Sbjct: 463  RMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAF 522

Query: 612  RTHEGHYEFLVMPFGLTNAPATFQALMNNIFKPFLRKFVLVFFDDILVYSRSEEEHELHM 671
            R   G +E+LVMP+G++ APA FQ  +N I        V+ + DDIL++S+SE EH  H+
Sbjct: 523  RCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHV 582

Query: 672  KKVLSLLRQNELYANQKKCHFAQKKIEYLGHVISGEGVAVDPEKIRSISNWPQPTNVKEI 731
            K VL  L+   L  NQ KC F Q +++++G+ IS +G     E I  +  W QP N KE+
Sbjct: 583  KDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKEL 642

Query: 732  RGFLGLTGYYRRFVQHYGTIAAPLTQQLKKG-GFHWNEEAMLAFERLKSAMIKLPVLALP 791
            R FLG   Y R+F+     +  PL   LKK   + W      A E +K  ++  PVL   
Sbjct: 643  RQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHF 702

Query: 792  DFSKQFEIEADASGYGVGAVLVQ---DGR--PIAFYSHTLALRDRARPVYERELMAVVLA 851
            DFSK+  +E DAS   VGAVL Q   D +  P+ +YS  ++       V ++E++A++ +
Sbjct: 703  DFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKS 762

Query: 852  VQRWRPYL--LIGKFKVKTDQKAL--KFLLDQRIIQPQYQKWIAKLLGYSFEVVYKPGVD 911
            ++ WR YL   I  FK+ TD + L  +   +      +  +W   L  ++FE+ Y+PG  
Sbjct: 763  LKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSA 822

Query: 912  NGAADALSRKPDGVQ-----------LFGLSIPITVDLEVIKKEVYQDPKYEKIIKQLEQ 971
            N  ADALSR  D  +            F   I IT D +   + V +     K++  L  
Sbjct: 823  NHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFK--NQVVTEYTNDTKLLNLLNN 882

Query: 972  GEELSESNYSMRRGLLL------------------------------------------- 1031
             ++  E N  ++ GLL+                                           
Sbjct: 883  EDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRR 942

Query: 1032 ------------------------------------------------------------ 1091
                                                                        
Sbjct: 943  FTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSG 1002

Query: 1092 ------------------------------------------------------------ 1151
                                                                        
Sbjct: 1003 YNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTW 1062

Query: 1152 -------------------------YKNRLGVETYLRCFCNEKPKDWSKWLPWTEYWYNT 1158
                                      +    VE  LRC C+  P  W   +   +  YN 
Sbjct: 1063 KDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNN 1122

[Close]

BLAST of MELO.jh102112.1 vs. ExPASy TrEMBL
Match: A0A5A7TAX4 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold366G00930 PE=4 SV=1)

HSP 1 Score: 2062 bits (5343), Expect = 0.0
Identity = 1130/1546 (73.09%), Postives = 1144/1546 (74.00%), Query Frame = 0


Query: 48   MVQTRIEERLECIDQEIAGMKKELSKVPAIEMSLSEIAKSLELMRLQSEKQQQLLFTIVE 107
            MVQTRIEERLECIDQEIAGMKKELSKVPAIEMSLSEIAKSLELMRLQSEKQQQLLFTIVE
Sbjct: 1    MVQTRIEERLECIDQEIAGMKKELSKVPAIEMSLSEIAKSLELMRLQSEKQQQLLFTIVE 60

Query: 108  SNTKERSTMSRLETESAAKEFEKMKGKEDDASSSKAIDSGRNFGADRNDRRIDGDDGAAD 167
            SNTKERSTMSRLETESAAKEFEKMKGKEDDASSSKAIDSGRNFGADRNDRRIDGDDGAAD
Sbjct: 61   SNTKERSTMSRLETESAAKEFEKMKGKEDDASSSKAIDSGRNFGADRNDRRIDGDDGAAD 120

Query: 168  RNKFKKIEMPVFTGEDPDSWLFRAERYFQIHKLTDSEKMLVSTISFDGPALNWFRSQEER 227
            RNKFKKIEMPVFTGEDPDSWLFRAERYFQIHKLTDSEKMLVSTISFDGPALNWFRSQEER
Sbjct: 121  RNKFKKIEMPVFTGEDPDSWLFRAERYFQIHKLTDSEKMLVSTISFDGPALNWFRSQEER 180

Query: 228  DKFTNWSNMKERLLIRFRSNKDGTLSGQFLRIKQEGTVEEYINLFDKMVAPVNDLPERVI 287
            DKFTNWSNMKERLLIRFRSNKDGTLSGQFLRIKQEGTVEEYINLFDKMVAPVNDLPERVI
Sbjct: 181  DKFTNWSNMKERLLIRFRSNKDGTLSGQFLRIKQEGTVEEYINLFDKMVAPVNDLPERVI 240

Query: 288  LDTFMNGLLPWVRSEVFFCRPKSLAEMMEAAQMVENREIARIEAKMSGYSGGRLTANNNA 347
            LDTFMNGLLPWVRSEVFFCRPKSLAEMMEAAQMVENREIARIEAKMSGYSGGRLTANNNA
Sbjct: 241  LDTFMNGLLPWVRSEVFFCRPKSLAEMMEAAQMVENREIARIEAKMSGYSGGRLTANNNA 300

Query: 348  VGKTSTGAIAGDNKNNTVFPIRTITLRSSVPNENRREGTYKRLPDAEFQARKEKGLCFRC 407
            VGKTSTGAIAGDNKNNTVFPIRTITLRSSVPNENRREGTYKRLPDAEFQARKEKGLCFRC
Sbjct: 301  VGKTSTGAIAGDNKNNTVFPIRTITLRSSVPNENRREGTYKRLPDAEFQARKEKGLCFRC 360

Query: 408  NEKYSADHKCRLREQRELRMFVVTDDRDEYEIVEEENERKELSCIELKEDVTTVVELSIN 467
            NEKYSADHKCRLREQRELRMFVVTDDRDEYEIVEEENERKELSCIELKEDVTTVVELSIN
Sbjct: 361  NEKYSADHKCRLREQRELRMFVVTDDRDEYEIVEEENERKELSCIELKEDVTTVVELSIN 420

Query: 468  SVVGLNDP---------------------------------------------------- 527
            SVVGLNDP                                                    
Sbjct: 421  SVVGLNDPGTMKVRGKLCGEEVVVLIDCGATHNFVSEKLVKKLSLPIKETSHYGVILGSG 480

Query: 528  ------------------------------------------------------------ 587
                                                                        
Sbjct: 481  AAVQGKGVCEKLEVQMGGWKIVEDFLPLELGGVDVILGMQWLYSLGVTTVDWKNLSMTFI 540

Query: 588  ---------------------------------------------TLEENEHGLFRRS-- 647
                                                         TLEENEH LF     
Sbjct: 541  ADGKEVKIKGDPSLTKARISLKKLIKNWEDKDTGYLIECRSLQVKTLEENEHSLFSTEAV 600

Query: 648  EQGVSEGPISSVIEQFS-MFLIGREVTTSKEIEHHIHLKE------------------EL 707
             + VSEGPISSVIEQFS +F    ++   +EIEHHIHLKE                  E+
Sbjct: 601  SKAVSEGPISSVIEQFSDVFDWPEKLPPRREIEHHIHLKEGTNPINVRPYRYGFHQKEEM 660

Query: 708  IQLMCDHID--------------MVFTKKRRWRNYWRFCVDYRAVNNATIPDKFPIPVVE 767
             +L+ + ++              ++  KK+     WRFCVDYRAVNNATIPDKFPIPVVE
Sbjct: 661  EKLVREMLNSGVIRPSTSPYSSPVLLVKKKD--GSWRFCVDYRAVNNATIPDKFPIPVVE 720

Query: 768  ELFDELCGATLFSKIDLKSGYHQIRMVDEDVEKTAFRTHEGHYEFLVMPFGLTNAPATFQ 827
            ELFDELCGATLFSKIDLKSGYHQIRMVDEDVEKTAFRTHEGHYEFLVMPFGLTNAPATFQ
Sbjct: 721  ELFDELCGATLFSKIDLKSGYHQIRMVDEDVEKTAFRTHEGHYEFLVMPFGLTNAPATFQ 780

Query: 828  ALMNNIFKPFLRKFVLVFFDDILVYSRSEEEHELHMKKVLSLLRQNELYANQKKCHFAQK 887
            ALMNNIFKPFLRKFVLVFFDDILVYSRSEEEHELHMKKVLSLLRQNELYANQKKCHFAQK
Sbjct: 781  ALMNNIFKPFLRKFVLVFFDDILVYSRSEEEHELHMKKVLSLLRQNELYANQKKCHFAQK 840

Query: 888  KIEYLGHVISGEGVAVDPEKIRSISNWPQPTNVKEIRGFLGLTGYYRRFVQHYGTIAAPL 947
            KIEYLGHVISGEGVAVDPEKIRSISNWPQPTNVKEIRGFLGLTGYYRRFVQHYGTIAAPL
Sbjct: 841  KIEYLGHVISGEGVAVDPEKIRSISNWPQPTNVKEIRGFLGLTGYYRRFVQHYGTIAAPL 900

Query: 948  TQQLKKGGFHWNEEAMLAFERLKSAMIKLPVLALPDFSKQFEIEADASGYGVGAVLVQDG 1007
            TQQLKKGGFHWNEEAMLAFERLKSAMIKLPVLALPDFSKQFEIEADASGYGVGAVLVQDG
Sbjct: 901  TQQLKKGGFHWNEEAMLAFERLKSAMIKLPVLALPDFSKQFEIEADASGYGVGAVLVQDG 960

Query: 1008 RPIAFYSHTLALRDRARPVYERELMAVVLAVQRWRPYLLIGKFKVKTDQKALKFLLDQRI 1067
            RPIAFYSHTLALRDRARPVYERELMAVVLAVQRWRPYLLIGKFKVKTDQKALKFLLDQRI
Sbjct: 961  RPIAFYSHTLALRDRARPVYERELMAVVLAVQRWRPYLLIGKFKVKTDQKALKFLLDQRI 1020

Query: 1068 IQPQYQKWIAKLLGYSFEVVYKPGVDNGAADALSRKPDGVQLFGLSIPITVDLEVIKKEV 1127
            IQPQYQKWIAKLLGYSFEVVYKPGVDNGAADALSRKPDGVQLFGLSIPITVDLEVIKKEV
Sbjct: 1021 IQPQYQKWIAKLLGYSFEVVYKPGVDNGAADALSRKPDGVQLFGLSIPITVDLEVIKKEV 1080

Query: 1128 YQDPKYEKIIKQLEQGEELSESNYSMRRGLLLYKNRL----------------------- 1187
            YQDPKYEKIIKQLEQGEELSESNYSMRRGLLLYKNRL                       
Sbjct: 1081 YQDPKYEKIIKQLEQGEELSESNYSMRRGLLLYKNRLVILKQSSLIPVILDTFHNSVVGG 1140

Query: 1188 ------------------------------------------------------------ 1214
                                                                        
Sbjct: 1141 HSGFLRTYKRAAAELFWEGMKADIKKHCEECLTCQRSKSLSLSPAGLLVPLEIPQAVWSD 1200

[Close]

BLAST of MELO.jh102112.1 vs. ExPASy TrEMBL
Match: A0A5D3DT65 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00960 PE=4 SV=1)

HSP 1 Score: 2049 bits (5308), Expect = 0.0
Identity = 1122/1546 (72.57%), Postives = 1140/1546 (73.74%), Query Frame = 0


Query: 48   MVQTRIEERLECIDQEIAGMKKELSKVPAIEMSLSEIAKSLELMRLQSEKQQQLLFTIVE 107
            MVQTRIEERLECIDQEIAGMKKELSKVPAIEMSLSEIAKSLELMRLQSEKQQQLLFTIVE
Sbjct: 1    MVQTRIEERLECIDQEIAGMKKELSKVPAIEMSLSEIAKSLELMRLQSEKQQQLLFTIVE 60

Query: 108  SNTKERSTMSRLETESAAKEFEKMKGKEDDASSSKAIDSGRNFGADRNDRRIDGDDGAAD 167
            SNTKERSTMSRLETESAAKEFEKMKGKEDDASSSKAIDSGRNFGADRNDRRIDGDDGAAD
Sbjct: 61   SNTKERSTMSRLETESAAKEFEKMKGKEDDASSSKAIDSGRNFGADRNDRRIDGDDGAAD 120

Query: 168  RNKFKKIEMPVFTGEDPDSWLFRAERYFQIHKLTDSEKMLVSTISFDGPALNWFRSQEER 227
            RNKFKKIEMPVFTGEDPDSWLFRAERYFQIHKLTDSEKMLVSTISFDGPALNWFRSQEER
Sbjct: 121  RNKFKKIEMPVFTGEDPDSWLFRAERYFQIHKLTDSEKMLVSTISFDGPALNWFRSQEER 180

Query: 228  DKFTNWSNMKERLLIRFRSNKDGTLSGQFLRIKQEGTVEEYINLFDKMVAPVNDLPERVI 287
            DKFT+WSNMKERLLIRFRSNKDGTLSGQFLRIKQEGTVEEYINLFDKMVAPVNDLPERVI
Sbjct: 181  DKFTSWSNMKERLLIRFRSNKDGTLSGQFLRIKQEGTVEEYINLFDKMVAPVNDLPERVI 240

Query: 288  LDTFMNGLLPWVRSEVFFCRPKSLAEMMEAAQMVENREIARIEAKMSGYSGGRLTANNNA 347
            LDTFMNGLLPWVR+EVFFCRPKSLAEMMEAAQMVENREIARIEAKMSGYSGGRLTANNNA
Sbjct: 241  LDTFMNGLLPWVRTEVFFCRPKSLAEMMEAAQMVENREIARIEAKMSGYSGGRLTANNNA 300

Query: 348  VGKTSTGAIAGDNKNNTVFPIRTITLRSSVPNENRREGTYKRLPDAEFQARKEKGLCFRC 407
            VGKTSTGAIAGDNKNNTVFPIRTITLRSSVPNENRREGTYKRLPDAEFQARKEKGLCFRC
Sbjct: 301  VGKTSTGAIAGDNKNNTVFPIRTITLRSSVPNENRREGTYKRLPDAEFQARKEKGLCFRC 360

Query: 408  NEKYSADHKCRLREQRELRMFVVTDDRDEYEIVEEENERKELSCIELKEDVTTVVELSIN 467
            NEKYSADHKCRLREQRELRMFVVTDDRDEYEIVEEENER+ELSCIELKEDVTTVVELSIN
Sbjct: 361  NEKYSADHKCRLREQRELRMFVVTDDRDEYEIVEEENERRELSCIELKEDVTTVVELSIN 420

Query: 468  SVVGLNDP---------------------------------------------------- 527
            SVVGLNDP                                                    
Sbjct: 421  SVVGLNDPGTMKVRGKLCGEEVVVLIDCGATHNFVSEKLVKKLSLPIKETSHYGVILGSG 480

Query: 528  ------------------------------------------------------------ 587
                                                                        
Sbjct: 481  AAVQGKGVCEKLEVQIGGWKIVEDFLPLELGGVDVILGMQWLYSLGVTTVDWKNLSMTFI 540

Query: 588  ---------------------------------------------TLEENEHGLFRRS-- 647
                                                         TLEENEH  F     
Sbjct: 541  ADGKEVKIKGDPSLTKARISLKKLIKNWEDKDTGYLIECRSLQVKTLEENEHSWFSTEAV 600

Query: 648  EQGVSEGPISSVIEQFS-MFLIGREVTTSKEIEHHIHLKE------------------EL 707
             + VSEGPISSVIEQFS +F    ++   +EIEHHIHLKE                  E+
Sbjct: 601  SKAVSEGPISSVIEQFSDVFDWPEKLPPRREIEHHIHLKEGTNPINVRPYRYGFHQKEEM 660

Query: 708  IQLMCDHID--------------MVFTKKRRWRNYWRFCVDYRAVNNATIPDKFPIPVVE 767
             +L+ + ++              ++  KK+     WRFCVDYRAVNNATIPDKFPIPVVE
Sbjct: 661  EKLVREMLNSGVIRPSTSPYSSPVLLVKKKD--GSWRFCVDYRAVNNATIPDKFPIPVVE 720

Query: 768  ELFDELCGATLFSKIDLKSGYHQIRMVDEDVEKTAFRTHEGHYEFLVMPFGLTNAPATFQ 827
            ELFDELCGATLFSKIDLKSGYHQIRM DEDVEKTAFRTHEGHYEFLVMPFGLTNAPATFQ
Sbjct: 721  ELFDELCGATLFSKIDLKSGYHQIRMADEDVEKTAFRTHEGHYEFLVMPFGLTNAPATFQ 780

Query: 828  ALMNNIFKPFLRKFVLVFFDDILVYSRSEEEHELHMKKVLSLLRQNELYANQKKCHFAQK 887
            ALMNNIFKPFLRKFVLVFFDDILVYSRSEEEHELHMKKVLSLLRQNELYANQKKCHFAQK
Sbjct: 781  ALMNNIFKPFLRKFVLVFFDDILVYSRSEEEHELHMKKVLSLLRQNELYANQKKCHFAQK 840

Query: 888  KIEYLGHVISGEGVAVDPEKIRSISNWPQPTNVKEIRGFLGLTGYYRRFVQHYGTIAAPL 947
            KIEYLGHVISGEGVAVDPEKIRSISNWPQPTNVKEIRGFLGLTGYYRRFVQHYGTIAAPL
Sbjct: 841  KIEYLGHVISGEGVAVDPEKIRSISNWPQPTNVKEIRGFLGLTGYYRRFVQHYGTIAAPL 900

Query: 948  TQQLKKGGFHWNEEAMLAFERLKSAMIKLPVLALPDFSKQFEIEADASGYGVGAVLVQDG 1007
            TQQLKKGGFHWNEEA LAFERLKSAMIKLPVLALPDFSKQFEIEADASGYGVGAVLVQDG
Sbjct: 901  TQQLKKGGFHWNEEAKLAFERLKSAMIKLPVLALPDFSKQFEIEADASGYGVGAVLVQDG 960

Query: 1008 RPIAFYSHTLALRDRARPVYERELMAVVLAVQRWRPYLLIGKFKVKTDQKALKFLLDQRI 1067
            RPIAFYSHTLALRDRARPVYERELMAVVLAVQRWRPYLLIGKFKVKTDQKALKFLLDQRI
Sbjct: 961  RPIAFYSHTLALRDRARPVYERELMAVVLAVQRWRPYLLIGKFKVKTDQKALKFLLDQRI 1020

Query: 1068 IQPQYQKWIAKLLGYSFEVVYKPGVDNGAADALSRKPDGVQLFGLSIPITVDLEVIKKEV 1127
            IQPQYQKWIAKLLGYSFEVVYKPGVDNGAADALSRKPDGVQLFGLSIPITVDLEVIKKEV
Sbjct: 1021 IQPQYQKWIAKLLGYSFEVVYKPGVDNGAADALSRKPDGVQLFGLSIPITVDLEVIKKEV 1080

Query: 1128 YQDPKYEKIIKQLEQGEELSESNYSMRRGLLLYKNRL----------------------- 1187
            YQDPKYEKIIKQLEQGEEL+ESNYSMRRGLLLYKNRL                       
Sbjct: 1081 YQDPKYEKIIKQLEQGEELTESNYSMRRGLLLYKNRLVILKQSSLIPVILDTFHNSVVGG 1140

Query: 1188 ------------------------------------------------------------ 1214
                                                                        
Sbjct: 1141 HSGFLRTYKRAAAELFWEGMKADIKKHCEECLTCQRSKSLSLSPAGLLVPLEIPQAVWSD 1200

[Close]

BLAST of MELO.jh102112.1 vs. ExPASy TrEMBL
Match: A0A5D3DB20 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00530 PE=4 SV=1)

HSP 1 Score: 2042 bits (5290), Expect = 0.0
Identity = 1119/1546 (72.38%), Postives = 1138/1546 (73.61%), Query Frame = 0


Query: 48   MVQTRIEERLECIDQEIAGMKKELSKVPAIEMSLSEIAKSLELMRLQSEKQQQLLFTIVE 107
            MVQTRIEERLECIDQEIAGMKKELSKVPAIEMSLSEIAKSLELMRLQSEKQQQLLFTIVE
Sbjct: 1    MVQTRIEERLECIDQEIAGMKKELSKVPAIEMSLSEIAKSLELMRLQSEKQQQLLFTIVE 60

Query: 108  SNTKERSTMSRLETESAAKEFEKMKGKEDDASSSKAIDSGRNFGADRNDRRIDGDDGAAD 167
            SNTKERSTMSRLETESAAKEFEKMKGKEDDASSSKAIDSGRN GADRNDRRIDGDDGAAD
Sbjct: 61   SNTKERSTMSRLETESAAKEFEKMKGKEDDASSSKAIDSGRNCGADRNDRRIDGDDGAAD 120

Query: 168  RNKFKKIEMPVFTGEDPDSWLFRAERYFQIHKLTDSEKMLVSTISFDGPALNWFRSQEER 227
            RNKFKKIEMPVFTGEDPDSWLFRAERYFQIHKLTDSEKMLVSTISFDGPALNWFRSQEER
Sbjct: 121  RNKFKKIEMPVFTGEDPDSWLFRAERYFQIHKLTDSEKMLVSTISFDGPALNWFRSQEER 180

Query: 228  DKFTNWSNMKERLLIRFRSNKDGTLSGQFLRIKQEGTVEEYINLFDKMVAPVNDLPERVI 287
            DKFT+WSNMKERLLIRFRSNKDGTLSGQFLRIKQEGTVEEYINLFDKMVAPVNDLPERVI
Sbjct: 181  DKFTSWSNMKERLLIRFRSNKDGTLSGQFLRIKQEGTVEEYINLFDKMVAPVNDLPERVI 240

Query: 288  LDTFMNGLLPWVRSEVFFCRPKSLAEMMEAAQMVENREIARIEAKMSGYSGGRLTANNNA 347
            LDTFMNGLLPWVRSEVFFCRPKSLAEMMEAAQMVENREIAR EAKMSGYSGG+LTANNN 
Sbjct: 241  LDTFMNGLLPWVRSEVFFCRPKSLAEMMEAAQMVENREIARTEAKMSGYSGGKLTANNNV 300

Query: 348  VGKTSTGAIAGDNKNNTVFPIRTITLRSSVPNENRREGTYKRLPDAEFQARKEKGLCFRC 407
            VGKTSTGAIAGDNKNNTVFPIRTITLRSSVPNENRREGTYKRLPDAEFQARKEKGLCFRC
Sbjct: 301  VGKTSTGAIAGDNKNNTVFPIRTITLRSSVPNENRREGTYKRLPDAEFQARKEKGLCFRC 360

Query: 408  NEKYSADHKCRLREQRELRMFVVTDDRDEYEIVEEENERKELSCIELKEDVTTVVELSIN 467
            NEKYSADHKCRLREQRELRMFVVT +RDEYEIVEEENER+ELSCIELKEDVTTVVELSIN
Sbjct: 361  NEKYSADHKCRLREQRELRMFVVTAERDEYEIVEEENERRELSCIELKEDVTTVVELSIN 420

Query: 468  SVVGLNDP---------------------------------------------------- 527
            SVVGLNDP                                                    
Sbjct: 421  SVVGLNDPGTMKVRGKLCGEEVVILIDCGATHNFVSEKLVKKLSLPIKETSHYGVILGSG 480

Query: 528  ------------------------------------------------------------ 587
                                                                        
Sbjct: 481  AAVQGKGVCEKLEVQMGGWKIVEDFLPLELGGVDVILGMQWLYSLGVTTVDWKNLSMTFI 540

Query: 588  ---------------------------------------------TLEENEHGLFRRS-- 647
                                                         TLEENEH LF     
Sbjct: 541  ADGKEVKIKGDPSLTKARISLKKLIKNWEDKDTGYLIECRSLQVKTLEENEHSLFSTEAV 600

Query: 648  EQGVSEGPISSVIEQFS-MFLIGREVTTSKEIEHHIHLKE------------------EL 707
             + VSEGPISSVIEQFS +F    ++   +EIEHHIHLKE                  E+
Sbjct: 601  SKAVSEGPISSVIEQFSDVFEWPEKLPPRREIEHHIHLKEGTNPINVRPYRYGFHQKEEM 660

Query: 708  IQLMCDHID--------------MVFTKKRRWRNYWRFCVDYRAVNNATIPDKFPIPVVE 767
             +L+ + ++              ++  KK+     WRFCVDYRAVNNATIPDKFPIPVVE
Sbjct: 661  EKLVKEMLNSGVIRPSTSPYSSPVLLVKKKD--GSWRFCVDYRAVNNATIPDKFPIPVVE 720

Query: 768  ELFDELCGATLFSKIDLKSGYHQIRMVDEDVEKTAFRTHEGHYEFLVMPFGLTNAPATFQ 827
            ELFDELCGATLFSKIDLKSGYHQIRMVDEDVEKTAFRTHEGHYEFLVMPFGLTNAPATFQ
Sbjct: 721  ELFDELCGATLFSKIDLKSGYHQIRMVDEDVEKTAFRTHEGHYEFLVMPFGLTNAPATFQ 780

Query: 828  ALMNNIFKPFLRKFVLVFFDDILVYSRSEEEHELHMKKVLSLLRQNELYANQKKCHFAQK 887
            ALMNNIFKPFLRKFVLVFFDDILVYSRSEEEHELHMKKVLSLLRQNELYANQKKCHFAQK
Sbjct: 781  ALMNNIFKPFLRKFVLVFFDDILVYSRSEEEHELHMKKVLSLLRQNELYANQKKCHFAQK 840

Query: 888  KIEYLGHVISGEGVAVDPEKIRSISNWPQPTNVKEIRGFLGLTGYYRRFVQHYGTIAAPL 947
            KIEYLGHVISGEGVAVDPEKIRSISNWPQPTNVKEIRGFLGLTGYYRRFVQHYGTIAAPL
Sbjct: 841  KIEYLGHVISGEGVAVDPEKIRSISNWPQPTNVKEIRGFLGLTGYYRRFVQHYGTIAAPL 900

Query: 948  TQQLKKGGFHWNEEAMLAFERLKSAMIKLPVLALPDFSKQFEIEADASGYGVGAVLVQDG 1007
            TQQLKKGGFHWNEEA LAFERLKSAMIKLPVLALPDFSKQFEIEADASGYGVGAVLVQDG
Sbjct: 901  TQQLKKGGFHWNEEAKLAFERLKSAMIKLPVLALPDFSKQFEIEADASGYGVGAVLVQDG 960

Query: 1008 RPIAFYSHTLALRDRARPVYERELMAVVLAVQRWRPYLLIGKFKVKTDQKALKFLLDQRI 1067
            RPIAFYSHTLALRDRARPVYERELMAVVLAVQRWRPYLLIGKFKVKTDQKALKFLLDQRI
Sbjct: 961  RPIAFYSHTLALRDRARPVYERELMAVVLAVQRWRPYLLIGKFKVKTDQKALKFLLDQRI 1020

Query: 1068 IQPQYQKWIAKLLGYSFEVVYKPGVDNGAADALSRKPDGVQLFGLSIPITVDLEVIKKEV 1127
            IQPQYQKWIAKLLGYSFEVVYKPGVDNGAADALSRKPDGVQLFGLSIPITVDLEVIKKEV
Sbjct: 1021 IQPQYQKWIAKLLGYSFEVVYKPGVDNGAADALSRKPDGVQLFGLSIPITVDLEVIKKEV 1080

Query: 1128 YQDPKYEKIIKQLEQGEELSESNYSMRRGLLLYKNRL----------------------- 1187
            YQDPKYEKIIKQLEQGEEL+ESNYSMRRGLLLYKNRL                       
Sbjct: 1081 YQDPKYEKIIKQLEQGEELTESNYSMRRGLLLYKNRLVILKQSSLIPVILDTFHNSVVGG 1140

Query: 1188 ------------------------------------------------------------ 1214
                                                                        
Sbjct: 1141 HSGFLRTYKRAAAELFWEGMKADIKKHCEECLTCQRSKSLSLSPAGLLVPLEIPQAVWSD 1200

[Close]

BLAST of MELO.jh102112.1 vs. ExPASy TrEMBL
Match: A0A5A7TU09 (Glucose-6-phosphate 1-epimerase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G001680 PE=3 SV=1)

HSP 1 Score: 1982 bits (5134), Expect = 0.0
Identity = 1087/1546 (70.31%), Postives = 1122/1546 (72.57%), Query Frame = 0


Query: 48   MVQTRIEERLECIDQEIAGMKKELSKVPAIEMSLSEIAKSLELMRLQSEKQQQLLFTIVE 107
            MVQTRIEERLECIDQEIAGMKKELSKVPAIEMSLSEIAKSLELMRLQSEKQQQLLFTIVE
Sbjct: 1    MVQTRIEERLECIDQEIAGMKKELSKVPAIEMSLSEIAKSLELMRLQSEKQQQLLFTIVE 60

Query: 108  SNTKERSTMSRLETESAAKEFEKMKGKEDDASSSKAIDSGRNFGADRNDRRIDGDDGAAD 167
            SNTKERSTMSRLETESAAKEFEKMKGKEDDASSSKAI+SGRNFGADRNDRRID DDGAAD
Sbjct: 61   SNTKERSTMSRLETESAAKEFEKMKGKEDDASSSKAIESGRNFGADRNDRRIDSDDGAAD 120

Query: 168  RNKFKKIEMPVFTGEDPDSWLFRAERYFQIHKLTDSEKMLVSTISFDGPALNWFRSQEER 227
            RNKFKKIEMPVFTGEDPDSWLFRAERYFQIHKLTDSEKMLVSTISFDGPALNWFRSQEER
Sbjct: 121  RNKFKKIEMPVFTGEDPDSWLFRAERYFQIHKLTDSEKMLVSTISFDGPALNWFRSQEER 180

Query: 228  DKFTNWSNMKERLLIRFRSNKDGTLSGQFLRIKQEGTVEEYINLFDKMVAPVNDLPERVI 287
            DKFT+WSNMKERLLIRFRSNKDGTLSGQFLRIKQEGTVEEYINLFDKMVAPVNDLPERVI
Sbjct: 181  DKFTSWSNMKERLLIRFRSNKDGTLSGQFLRIKQEGTVEEYINLFDKMVAPVNDLPERVI 240

Query: 288  LDTFMNGLLPWVRSEVFFCRPKSLAEMMEAAQMVENREIARIEAKMSGYSGGRLTANNNA 347
            LDTFMNGLLPWVRSEVFFCRPKSLAEMMEAAQ+VENREIAR+EAKMSGYSGG+L+ NNN 
Sbjct: 241  LDTFMNGLLPWVRSEVFFCRPKSLAEMMEAAQLVENREIARVEAKMSGYSGGKLSVNNNV 300

Query: 348  VGKTSTGAIAGDNKNNTVFPIRTITLRSSVPNENRREGTYKRLPDAEFQARKEKGLCFRC 407
            VGK S GA+AGDNKNNTVFPIRTITLRSSVPNENRREGTYKRLPDAEFQARKEKGLCFRC
Sbjct: 301  VGKASIGAVAGDNKNNTVFPIRTITLRSSVPNENRREGTYKRLPDAEFQARKEKGLCFRC 360

Query: 408  NEKYSADHKCRLREQRELRMFVVTDDRDEYEIVEEENERKELSCIELKEDVTTVVELSIN 467
            NEKYSADHKC+LREQRELRMFVVT +RDEYEIVEEENER EL+CIELKEDV TVVELSIN
Sbjct: 361  NEKYSADHKCKLREQRELRMFVVTAERDEYEIVEEENERTELNCIELKEDVATVVELSIN 420

Query: 468  SVVGLNDP---------------------------------------------------- 527
            SVVGLNDP                                                    
Sbjct: 421  SVVGLNDPGTMKVRGKLFGEEVVILIDCGATHNFVSEKLVKKLSLSIKETSHYGVILGSG 480

Query: 528  ------------------------------------------------------------ 587
                                                                        
Sbjct: 481  AAVQGKGVCEKLEVQMSGWKIVEDFLPLELGGVDVILGMQWLYSLGVTTVDWKNLSMTFI 540

Query: 588  ---------------------------------------------TLEENEHGLFRRS-- 647
                                                          LE NE+ LF     
Sbjct: 541  ADGKEVKIKGDPSLTKARISLKKLIKNWEDKDTGYLIECRSLQVKLLEGNEYSLFSTEAV 600

Query: 648  EQGVSEGPISSVIEQFS-MFLIGREVTTSKEIEHHIHLKE------------------EL 707
               +S+G ISSVI+QF  +F    ++   + IEHHIHLKE                  E+
Sbjct: 601  SNALSDGSISSVIKQFQDVFEWPEKLPPRRGIEHHIHLKEGTNPINVRPYRYGFHQKEEM 660

Query: 708  IQLMCDHID--------------MVFTKKRRWRNYWRFCVDYRAVNNATIPDKFPIPVVE 767
             +L+ + ++              ++  KK+     WRFCVDYRAVNNATIPDKFPIPVVE
Sbjct: 661  EKLVKEMLNSGVIRPSTSPYSSPVLLVKKKD--GSWRFCVDYRAVNNATIPDKFPIPVVE 720

Query: 768  ELFDELCGATLFSKIDLKSGYHQIRMVDEDVEKTAFRTHEGHYEFLVMPFGLTNAPATFQ 827
            ELFDEL GA LFSKIDLKSGYHQIRMVDEDVEKTAFRTHEGHYEFLVMPFGLTNAPATFQ
Sbjct: 721  ELFDELGGAILFSKIDLKSGYHQIRMVDEDVEKTAFRTHEGHYEFLVMPFGLTNAPATFQ 780

Query: 828  ALMNNIFKPFLRKFVLVFFDDILVYSRSEEEHELHMKKVLSLLRQNELYANQKKCHFAQK 887
            ALMNNIFKPFLRKFVLVFFDDILVYSRSEEEHE HMKKVLSLLRQNELYANQKKCHFAQK
Sbjct: 781  ALMNNIFKPFLRKFVLVFFDDILVYSRSEEEHEFHMKKVLSLLRQNELYANQKKCHFAQK 840

Query: 888  KIEYLGHVISGEGVAVDPEKIRSISNWPQPTNVKEIRGFLGLTGYYRRFVQHYGTIAAPL 947
            KIEYLGHVISGEGVAVDPEKIRSISNWPQPTNVKEIRGFLGLTGYYRRFV++YGTIAAPL
Sbjct: 841  KIEYLGHVISGEGVAVDPEKIRSISNWPQPTNVKEIRGFLGLTGYYRRFVRNYGTIAAPL 900

Query: 948  TQQLKKGGFHWNEEAMLAFERLKSAMIKLPVLALPDFSKQFEIEADASGYGVGAVLVQDG 1007
            TQQLKKGGFHWNEEA LAFERLKSAMI LPVLALPDFSKQFEIEADASGYGVGAVLVQDG
Sbjct: 901  TQQLKKGGFHWNEEATLAFERLKSAMITLPVLALPDFSKQFEIEADASGYGVGAVLVQDG 960

Query: 1008 RPIAFYSHTLALRDRARPVYERELMAVVLAVQRWRPYLLIGKFKVKTDQKALKFLLDQRI 1067
            RPIAFYSHTLALRDRARPVYERELMAVVLAVQRWRPYLLIGKFKVKTDQKALKFLLDQRI
Sbjct: 961  RPIAFYSHTLALRDRARPVYERELMAVVLAVQRWRPYLLIGKFKVKTDQKALKFLLDQRI 1020

Query: 1068 IQPQYQKWIAKLLGYSFEVVYKPGVDNGAADALSRKPDGVQLFGLSIPITVDLEVIKKEV 1127
            IQPQYQKWIAKLLGYSFEVVYKPGVDNGAADALSRKPDGVQLFGLSIPITVDLEVIKKEV
Sbjct: 1021 IQPQYQKWIAKLLGYSFEVVYKPGVDNGAADALSRKPDGVQLFGLSIPITVDLEVIKKEV 1080

Query: 1128 YQDPKYEKIIKQLEQGEELSESNYSMRRGLLLYKNRL----------------------- 1187
            YQDPKYEKIIKQLEQGEEL+E+NYSM+RGLL+YKNRL                       
Sbjct: 1081 YQDPKYEKIIKQLEQGEELAENNYSMQRGLLMYKNRLVILKQSSLIPVILDTFHNSVVGG 1140

Query: 1188 ------------------------------------------------------------ 1214
                                                                        
Sbjct: 1141 HSGFLRTYKRAAAELFWEGMKTDIKKHCEECLTCQRSKSLALSPAGLLVPLEIPQAVWSD 1200

[Close]

BLAST of MELO.jh102112.1 vs. ExPASy TrEMBL
Match: A0A5D3DLL9 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G002170 PE=4 SV=1)

HSP 1 Score: 1800 bits (4661), Expect = 0.0
Identity = 972/1544 (62.95%), Postives = 1076/1544 (69.69%), Query Frame = 0


Query: 48   MVQTRIEERLECIDQEIAGMKKELSKVPAIEMSLSEIAKSLELMRLQSEKQQQLLFTIVE 107
            MVQTRIEERLECIDQEIAGMKKELSKVPAIE+SL+EIAKS+ELMRLQSEKQQQLLFTI+E
Sbjct: 1    MVQTRIEERLECIDQEIAGMKKELSKVPAIEISLNEIAKSIELMRLQSEKQQQLLFTIIE 60

Query: 108  SNTKERSTMSRLETESAAKEFEKMKGKEDDASSSKAIDSGRNFGADRNDRRIDGDDGAAD 167
            +NT ERST S + TE+AAKEFEK KGKE DASSS+  ++ RN   + N+RR DGD+   D
Sbjct: 61   TNTMERSTTSGIVTETAAKEFEKAKGKEGDASSSRMTEADRNLRPNGNERRSDGDESFQD 120

Query: 168  RNKFKKIEMPVFTGEDPDSWLFRAERYFQIHKLTDSEKMLVSTISFDGPALNWFRSQEER 227
            RNKFKKIEMPVFTGEDPDSWLFRAERYFQIHKLTDSEKMLVST+SFDGPALNWFRSQEER
Sbjct: 121  RNKFKKIEMPVFTGEDPDSWLFRAERYFQIHKLTDSEKMLVSTVSFDGPALNWFRSQEER 180

Query: 228  DKFTNWSNMKERLLIRFRSNKDGTLSGQFLRIKQEGTVEEYINLFDKMVAPVNDLPERVI 287
            DKFT+W+NMKERLL+RFRSNKDGT+SGQFLRIKQEGTVEEYINLFDKMVAPVNDLPERVI
Sbjct: 181  DKFTSWANMKERLLVRFRSNKDGTISGQFLRIKQEGTVEEYINLFDKMVAPVNDLPERVI 240

Query: 288  LDTFMNGLLPWVRSEVFFCRPKSLAEMMEAAQMVENREIARIEAKMSGYSGGRLTANNNA 347
            LDTFMNGLLPWVRSEVFFCRPKSLAEMME AQMVENREIAR EAKM GYSGG++   N+ 
Sbjct: 241  LDTFMNGLLPWVRSEVFFCRPKSLAEMMEVAQMVENREIARTEAKMCGYSGGKIAGQNSV 300

Query: 348  VGKTSTGAIAGDNKNNTVFPIRTITLRSSVPNENRREGTYKRLPDAEFQARKEKGLCFRC 407
            VGKTSTG +AGDNKNNTVFPIRTITLRSSVPNENRREG+YKRLPDAEFQARKEKGLCFRC
Sbjct: 301  VGKTSTGGVAGDNKNNTVFPIRTITLRSSVPNENRREGSYKRLPDAEFQARKEKGLCFRC 360

Query: 408  NEKYSADHKCRLREQRELRMFVVTDDRDEYEIVEEENERKELSCIELKEDVTTVVELSIN 467
            NEKYSADHKCR++EQRELRMFVVT+ R+EYEIVE+E E KEL C+E+ E++TTVVELSIN
Sbjct: 361  NEKYSADHKCRMKEQRELRMFVVTEGREEYEIVEDEKEEKELGCMEINENLTTVVELSIN 420

Query: 468  SVVGLNDP---------------------------------------------------- 527
            SVVGLNDP                                                    
Sbjct: 421  SVVGLNDPGTMKVRGKLLGEEVVILIDCGATHNFVSEKLVRKLSLPIKETSHYGVILGSG 480

Query: 528  ------------------------------------------------------------ 587
                                                                        
Sbjct: 481  AAVQGKGVCEKLEVQLKDWKIVEDFLPLELGGVDVILGMQWLYSLGVTTVDWKNLSLSFM 540

Query: 588  ---------------------------------------------TLEENEHGLFRRSEQ 647
                                                         T+E++EH L     +
Sbjct: 541  AEGKEVNIKGDPSLTKARISLKNMIKNWEEKDSGFLIECRSLQVRTVEDDEHYLLNTEVE 600

Query: 648  GVSEGPISSVIEQF-SMFLIGREVTTSKEIEHHIHLKE---------------------E 707
              S+G I SVI+QF  +F    ++   +EIEHHIHLKE                     +
Sbjct: 601  --SKGRIGSVIKQFRDVFEWPEKLPPRREIEHHIHLKEGTNPINVRPYRYGFHQKEEMEK 660

Query: 708  LIQLMCDH-----------IDMVFTKKRRWRNYWRFCVDYRAVNNATIPDKFPIPVVEEL 767
            L+Q M +              ++  KK+     WRFCVDYRAVNNATIPDKFPIPVVEEL
Sbjct: 661  LVQEMLNSGVIRPSISPYSSPVLLVKKKD--GSWRFCVDYRAVNNATIPDKFPIPVVEEL 720

Query: 768  FDELCGATLFSKIDLKSGYHQIRMVDEDVEKTAFRTHEGHYEFLVMPFGLTNAPATFQAL 827
            FDELCGATLFSKIDLKSGYHQIRM DED+EKTAFRTHEGHYEFLVMPFGLTNAPATFQAL
Sbjct: 721  FDELCGATLFSKIDLKSGYHQIRMADEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQAL 780

Query: 828  MNNIFKPFLRKFVLVFFDDILVYSRSEEEHELHMKKVLSLLRQNELYANQKKCHFAQKKI 887
            MNNIFKPFLRKFVLVFFDDILVYSR+EEEHE+HM+KVL++LR +EL+ANQKKCHFAQ+KI
Sbjct: 781  MNNIFKPFLRKFVLVFFDDILVYSRNEEEHEVHMRKVLAVLRHHELFANQKKCHFAQQKI 840

Query: 888  EYLGHVISGEGVAVDPEKIRSISNWPQPTNVKEIRGFLGLTGYYRRFVQHYGTIAAPLTQ 947
            EYLGHVISGEGVAVDPEKI++IS+WPQPTNVKE RGFLGLTGYYRRFV+HYGTIAAPLTQ
Sbjct: 841  EYLGHVISGEGVAVDPEKIKAISDWPQPTNVKETRGFLGLTGYYRRFVRHYGTIAAPLTQ 900

Query: 948  QLKKGGFHWNEEAMLAFERLKSAMIKLPVLALPDFSKQFEIEADASGYGVGAVLVQDGRP 1007
             LKKGGF+W EEA LAF RLKSAM+ LPVLALPDFSKQFEIEADASGYGVGAVLVQD RP
Sbjct: 901  LLKKGGFYWTEEATLAFNRLKSAMMSLPVLALPDFSKQFEIEADASGYGVGAVLVQDKRP 960

Query: 1008 IAFYSHTLALRDRARPVYERELMAVVLAVQRWRPYLLIGKFKVKTDQKALKFLLDQRIIQ 1067
            +A+YSHTLALRDR+RPVYERELMAVVLAVQRWRPYLLIGKF+VKTDQKALKFLLDQRIIQ
Sbjct: 961  VAYYSHTLALRDRSRPVYERELMAVVLAVQRWRPYLLIGKFRVKTDQKALKFLLDQRIIQ 1020

Query: 1068 PQYQKWIAKLLGYSFEVVYKPGVDNGAADALSRKPDGVQLFGLSIPITVDLEVIKKEVYQ 1127
            PQYQKWIAKLLGYSFEVVYKPGV+N AADALSRKP+ VQL+GLSIPI VDLE++KKEV Q
Sbjct: 1021 PQYQKWIAKLLGYSFEVVYKPGVENRAADALSRKPEEVQLYGLSIPIAVDLEIVKKEVLQ 1080

Query: 1128 DPKYEKIIKQLEQGEELSESNYSMRRGLLLYKNRL------------------------- 1187
            DPKYEKII+Q+EQGEEL  ++YS+++GLL++KNRL                         
Sbjct: 1081 DPKYEKIIRQIEQGEELEVNDYSLKKGLLMFKNRLVILKQSSLIPVILDTFHNSAIGGHS 1140

Query: 1188 ------------------------------------------------------------ 1214
                                                                        
Sbjct: 1141 GFLRTYKRIAAELYWMGMKADIKKHCEECLVCQRSKTLALSPAGLLVPLEIPQAIWSDIS 1200

[Close]

BLAST of MELO.jh102112.1 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 153.7 bits (387), Expect = 1.0e-36
Identity = 72/129 (55.81%), Postives = 90/129 (69.77%), Query Frame = 0


Query: 670 HMKKVLSLLRQNELYANQKKCHFAQKKIEYLG--HVISGEGVAVDPEKIRSISNWPQPTN 729
           H+  VL +  Q++ YAN+KKC F Q +I YLG  H+ISGEGV+ DP K+ ++  WP+P N
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 730 VKEIRGFLGLTGYYRRFVQHYGTIAAPLTQQLKKGGFHWNEEAMLAFERLKSAMIKLPVL 789
             E+RGFLGLTGYYRRFV++YG I  PLT+ LKK    W E A LAF+ LK A+  LPVL
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNSLKWTEMAALAFKALKGAVTTLPVL 122

Query: 790 ALPDFSKQF 797
           ALPD    F
Sbjct: 123 ALPDLKLPF 131

[Close]

BLAST of MELO.jh102112.1 vs. TAIR 10
Match: AT1G67020.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf; Has 72 Blast hits to 72 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 66.2 bits (160), Expect = 2.1e-10
Identity = 27/73 (36.99%), Postives = 46/73 (63.01%), Query Frame = 0


Query: 172 KKIEMPVFTGEDPDSWLFRAERYFQIHKLTDSEKMLVSTISFDGPALNWFRSQEERDKFT 231
           ++IEMPVF G     W  + ER+F++ +  DS+K+ +  +S +G AL WF  +    +F 
Sbjct: 108 RRIEMPVFDGSGVYEWFSKVERFFRVGRYQDSDKLDLVALSLEGVALKWFLREMSTLEFR 167

Query: 232 NWSNMKERLLIRF 245
           +W++ ++RLL RF
Sbjct: 168 DWNSFEQRLLARF 180

The following BLAST results are available for this feature:

BLAST of MELO.jh102112.1 vs. NCBI nr


Match Name	Identity	Description
KAA0040118.1	73.09	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK20833.1	72.57	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK26440.1 Ty3/gyp...	[more]
TYK20792.1	72.38	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0044875.1	70.31	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK06640.1	62.95	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK10078.1 Ty3/gyp...	[more]

BLAST of MELO.jh102112.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P20825	8.2e-84	43.68	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
P04323	1.6e-79	42.54	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
Q8I7P9	6.7e-78	39.58	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]
P10401	8.8e-70	34.10	Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogas...	[more]
P0CT41	1.1e-67	26.04	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]

BLAST of MELO.jh102112.1 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A5A7TAX4	73.09	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3DT65	72.57	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3DB20	72.38	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7TU09	70.31	Glucose-6-phosphate 1-epimerase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5D3DLL9	62.95	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]

BLAST of MELO.jh102112.1 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	1.0e-36	55.81	DNA/RNA polymerases superfamily protein	[more]
AT1G67020.1	2.1e-10	36.99	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 50..70
None	No IPR available	COILS	Coil	Coil	coord: 1048..1068
None	No IPR available	COILS	Coil	Coil	coord: 437..457
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 539..629 e-value: 2.4E-69 score: 234.8
None	No IPR available	GENE3D	2.40.50.40		coord: 1156..1212 e-value: 2.3E-5 score: 26.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..165
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 130..165
None	No IPR available	PANTHER	PTHR24559:SF324	TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEIN	coord: 550..921
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 550..921
None	No IPR available	CDD	cd01647	RT_LTR	coord: 539..704 e-value: 9.83768E-80 score: 257.524
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 797..912 e-value: 2.97177E-45 score: 157.269
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 548..703 e-value: 1.1E-29 score: 103.5
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 521..704 score: 13.11891
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 713..802 e-value: 1.7E-27 score: 97.3
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 569..704 e-value: 2.4E-69 score: 234.8
IPR041577	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	PFAM	PF17919	RT_RNaseH_2	coord: 766..860 e-value: 2.3E-27 score: 94.9
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 937..1055 e-value: 2.7E-14 score: 54.9
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 210..295 e-value: 1.8E-11 score: 44.2
IPR000953	Chromo/chromo shadow domain	PROSITE	PS50013	CHROMO_2	coord: 1164..1202 score: 8.629801
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 974..1014
IPR016197	Chromo-like domain superfamily	SUPERFAMILY	54160	Chromo domain-like	coord: 1129..1203
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 514..897

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO.jh102112.1.t1	MELO.jh102112.1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding