MELO.jh102038.1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh102038.1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Reverse transcriptase
Location	chr07: 13366783 .. 13368684 (-)
RNA-Seq Expression	MELO.jh102038.1
Synteny	MELO.jh102038.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGAACTTGATGAACAGAGTGTTTAGGGAGTTTCTAGATACTTTTGTGATCGTGTTTATTGATGATATCTTGATATACTCCAAGACGGAGGCCGAACATGAGGAGCATTTACGTATAGTTCTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCTTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCGTGTGAGGATAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGATTCTTACTGTACCTGATGGTTCTGGCAGTTTCGTGATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAACAGTGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAGTTGGCAGCGGTGGTTTTTGCTTTGAAAATATGGAGGCATTATTTATATGGTGAAAAGATACAAATATCCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGAGATCTTGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTCACTATGCAGTTAGCCCAGTTGACGGTACAGTCGACCCTGAGGCAAAGGATCATTGGTGCTCAGAGTAACGATCCTTATTTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCGGAGGGGTTCTCCATATCCTCTGATGGTGGACTTGCGTTTGAGAGACGCCTCTGTGTGCCGTCAGATAGTGTGATTAAGACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCGGGTAGTACAAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAGGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCATTCCGGAATGGAAGTGGGAAAACGTATCCATGGATTTCATTACAGGATTGCCGAGAACTCTGAGGGGTTTTACAGTGATTTGGGTTGTGGTGGACAGGCTTACCAAATCAACGCACTTCGTTCCGGGTAAATCCACCTGTACTGCTAGTAAGTGGGCACAGCTGTACATGTCGGAGATAGTGAGATTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGAAGGGTTTGCAGACTGCTATGGGAACGAGGTTAGACTTTAGTACAGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAAGTTTTAGAGGATATGTTGCGGGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCATTTGCATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCATTTGAGGCCTTGTACGGCAAATGTTGTAGATCCCCGGTTTGCTGGGGTGAGGTGGGTGAGCAGAGATTGATGGGTCCTGAGTTAGTTTAG

mRNA sequence

ATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGAACTTGATGAACAGAGTGTTTAGGGAGTTTCTAGATACTTTTGTGATCGTGTTTATTGATGATATCTTGATATACTCCAAGACGGAGGCCGAACATGAGGAGCATTTACGTATAGTTCTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCTTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCGTGTGAGGATAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGATTCTTACTGTACCTGATGGTTCTGGCAGTTTCGTGATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAACAGTGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAGTTGGCAGCGGTGGTTTTTGCTTTGAAAATATGGAGGCATTATTTATATGGTGAAAAGATACAAATATCCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGAGATCTTGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTCACTATGCAGTTAGCCCAGTTGACGGTACAGTCGACCCTGAGGCAAAGGATCATTGGTGCTCAGAGTAACGATCCTTATTTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCGGAGGGGTTCTCCATATCCTCTGATGGTGGACTTGCGTTTGAGAGACGCCTCTGTGTGCCGTCAGATAGTGTGATTAAGACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCGGGTAGTACAAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAGGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCATTCCGGAATGGAAGTGGGAAAACGTATCCATGGATTTCATTACAGGATTGCCGAGAACTCTGAGGGGTTTTACAGTGATTTGGGTTGTGGTGGACAGGCTTACCAAATCAACGCACTTCGTTCCGGGTAAATCCACCTGTACTGCTAGTAAGTGGGCACAGCTGTACATGTCGGAGATAGTGAGATTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGAAGGGTTTGCAGACTGCTATGGGAACGAGGTTAGACTTTAGTACAGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAAGTTTTAGAGGATATGTTGCGGGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCATTTGCATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCATTTGAGGCCTTGTACGGCAAATGTTGTAGATCCCCGGTTTGCTGGGGTGAGGTGGGTGAGCAGAGATTGATGGGTCCTGAGTTAGTTTAG

Coding sequence (CDS)

ATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGAACTTGATGAACAGAGTGTTTAGGGAGTTTCTAGATACTTTTGTGATCGTGTTTATTGATGATATCTTGATATACTCCAAGACGGAGGCCGAACATGAGGAGCATTTACGTATAGTTCTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCTTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCGTGTGAGGATAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGATTCTTACTGTACCTGATGGTTCTGGCAGTTTCGTGATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAACAGTGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAGTTGGCAGCGGTGGTTTTTGCTTTGAAAATATGGAGGCATTATTTATATGGTGAAAAGATACAAATATCCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGAGATCTTGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTCACTATGCAGTTAGCCCAGTTGACGGTACAGTCGACCCTGAGGCAAAGGATCATTGGTGCTCAGAGTAACGATCCTTATTTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCGGAGGGGTTCTCCATATCCTCTGATGGTGGACTTGCGTTTGAGAGACGCCTCTGTGTGCCGTCAGATAGTGTGATTAAGACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCGGGTAGTACAAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAGGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCATTCCGGAATGGAAGTGGGAAAACGTATCCATGGATTTCATTACAGGATTGCCGAGAACTCTGAGGGGTTTTACAGTGATTTGGGTTGTGGTGGACAGGCTTACCAAATCAACGCACTTCGTTCCGGGTAAATCCACCTGTACTGCTAGTAAGTGGGCACAGCTGTACATGTCGGAGATAGTGAGATTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGAAGGGTTTGCAGACTGCTATGGGAACGAGGTTAGACTTTAGTACAGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAAGTTTTAGAGGATATGTTGCGGGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCATTTGCATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCATTTGAGGCCTTGTACGGCAAATGTTGTAGATCCCCGGTTTGCTGGGGTGAGGTGGGTGAGCAGAGATTGATGGGTCCTGAGTTAGTTTAG

Protein sequence

MSFGLTNAPAVFMNLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPILTVPDGSGSFVIYSDASKKGLGCVLMQQCKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQISTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQSTLRQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLAFERRLCVPSDSVIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSTHFVPGKSTCTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELV

Homology

[Close]

BLAST of MELO.jh102038.1 vs. NCBI nr
Match: KAA0053368.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1281 bits (3314), Expect = 0.0
Identity = 633/633 (100.00%), Postives = 633/633 (100.00%), Query Frame = 0


Query: 1    MSFGLTNAPAVFMNLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 60
            MSFGLTNAPAVFMNLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK
Sbjct: 882  MSFGLTNAPAVFMNLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 941

Query: 61   LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 120
            LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR
Sbjct: 942  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 1001

Query: 121  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPILTVPDGSGSFVIYSD 180
            RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPILTVPDGSGSFVIYSD
Sbjct: 1002 RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPILTVPDGSGSFVIYSD 1061

Query: 181  ASKKGLGCVLMQQCKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIS 240
            ASKKGLGCVLMQQCKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIS
Sbjct: 1062 ASKKGLGCVLMQQCKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIS 1121

Query: 241  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 300
            TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Sbjct: 1122 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 1181

Query: 301  QAPLHRDLERAEIAVSVGAVTMQLAQLTVQSTLRQRIIGAQSNDPYLVEKRGLAEAGQAE 360
            QAPLHRDLERAEIAVSVGAVTMQLAQLTVQSTLRQRIIGAQSNDPYLVEKRGLAEAGQAE
Sbjct: 1182 QAPLHRDLERAEIAVSVGAVTMQLAQLTVQSTLRQRIIGAQSNDPYLVEKRGLAEAGQAE 1241

Query: 361  GFSISSDGGLAFERRLCVPSDSVIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK 420
            GFSISSDGGLAFERRLCVPSDSVIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK
Sbjct: 1242 GFSISSDGGLAFERRLCVPSDSVIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK 1301

Query: 421  REVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 480
            REVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV
Sbjct: 1302 REVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 1361

Query: 481  VVDRLTKSTHFVPGKSTCTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTA 540
            VVDRLTKSTHFVPGKSTCTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTA
Sbjct: 1362 VVDRLTKSTHFVPGKSTCTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTA 1421

Query: 541  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI 600
            MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI
Sbjct: 1422 MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI 1481

Query: 601  GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELV 633
            GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELV
Sbjct: 1482 GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELV 1514

[Close]

BLAST of MELO.jh102038.1 vs. NCBI nr
Match: KAA0048687.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1241 bits (3210), Expect = 0.0
Identity = 614/633 (97.00%), Postives = 621/633 (98.10%), Query Frame = 0


Query: 1    MSFGLTNAPAVFMNLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 60
            MSFGLTNAPAVFM+LMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNK
Sbjct: 694  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 753

Query: 61   LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 120
            LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR
Sbjct: 754  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 813

Query: 121  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPILTVPDGSGSFVIYSD 180
            RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAP+LTVPDGSGSFVIYSD
Sbjct: 814  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 873

Query: 181  ASKKGLGCVLMQQCKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIS 240
            ASKKGLGCVLMQQ KVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI 
Sbjct: 874  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 933

Query: 241  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 300
            TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Sbjct: 934  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 993

Query: 301  QAPLHRDLERAEIAVSVGAVTMQLAQLTVQSTLRQRIIGAQSNDPYLVEKRGLAEAGQAE 360
            QAPLHRDLERAEIAVSVGAVTMQLAQLTVQ TLRQRII AQSNDPYLVEKRGLAEAGQA 
Sbjct: 994  QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 1053

Query: 361  GFSISSDGGLAFERRLCVPSDSVIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK 420
             FS+SSDGGL FERRLCVPSDSV+KTELLSEAHSSPFSMHPGSTKMY+D+KRVYWWRNMK
Sbjct: 1054 EFSLSSDGGLLFERRLCVPSDSVVKTELLSEAHSSPFSMHPGSTKMYRDVKRVYWWRNMK 1113

Query: 421  REVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 480
            REVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV
Sbjct: 1114 REVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 1173

Query: 481  VVDRLTKSTHFVPGKSTCTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTA 540
            VVDRLTKS HFVPGKST TASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWK LQTA
Sbjct: 1174 VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKSLQTA 1233

Query: 541  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI 600
            MGTRLDFSTAFHPQTDGQTERLNQVLE MLRACALEFPGSWDSHLHLMEF YNNSYQATI
Sbjct: 1234 MGTRLDFSTAFHPQTDGQTERLNQVLEYMLRACALEFPGSWDSHLHLMEFVYNNSYQATI 1293

Query: 601  GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELV 633
            GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELV
Sbjct: 1294 GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELV 1326

[Close]

BLAST of MELO.jh102038.1 vs. NCBI nr
Match: KAA0051357.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1237 bits (3200), Expect = 0.0
Identity = 612/633 (96.68%), Postives = 619/633 (97.79%), Query Frame = 0


Query: 1    MSFGLTNAPAVFMNLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 60
            MSFGLTNAPAVFM+LMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNK
Sbjct: 684  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 743

Query: 61   LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 120
            LYAKFSKCEFWLKQVSFLGHVVSKA VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR
Sbjct: 744  LYAKFSKCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 803

Query: 121  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPILTVPDGSGSFVIYSD 180
            RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAP+LTVPDGSGSFVIYSD
Sbjct: 804  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 863

Query: 181  ASKKGLGCVLMQQCKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIS 240
            ASKKGLGCVLMQQ KVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI 
Sbjct: 864  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 923

Query: 241  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 300
            TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Sbjct: 924  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 983

Query: 301  QAPLHRDLERAEIAVSVGAVTMQLAQLTVQSTLRQRIIGAQSNDPYLVEKRGLAEAGQAE 360
            QAPLHRDLERAEIAVSVGAVTMQLAQLTVQ TLRQRII AQSNDPYLVEKRGLAEAGQA 
Sbjct: 984  QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 1043

Query: 361  GFSISSDGGLAFERRLCVPSDSVIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK 420
             FS+SSDGGL+FE RLCVPSDS +KTELL EAHSSPFSMHPGSTKMYQDLKRVYWWRNMK
Sbjct: 1044 EFSLSSDGGLSFEGRLCVPSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK 1103

Query: 421  REVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 480
            REVAEFVS+CLVCQQVK PRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV
Sbjct: 1104 REVAEFVSKCLVCQQVKEPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 1163

Query: 481  VVDRLTKSTHFVPGKSTCTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTA 540
            VVDRLTKS HFVPGKST TASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTA
Sbjct: 1164 VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTA 1223

Query: 541  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI 600
            MGTRLDFSTAFHPQ DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI
Sbjct: 1224 MGTRLDFSTAFHPQADGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI 1283

Query: 601  GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELV 633
            GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELV
Sbjct: 1284 GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELV 1316

[Close]

BLAST of MELO.jh102038.1 vs. NCBI nr
Match: KAA0057672.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1236 bits (3199), Expect = 0.0
Identity = 609/633 (96.21%), Postives = 619/633 (97.79%), Query Frame = 0


Query: 1   MSFGLTNAPAVFMNLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 60
           MSFGLTNAPAVFM+LMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNK
Sbjct: 212 MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 271

Query: 61  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 120
           LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR
Sbjct: 272 LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 331

Query: 121 RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPILTVPDGSGSFVIYSD 180
           RFVENFSR ATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAP+LTVPDGSGSFVIYSD
Sbjct: 332 RFVENFSRTATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 391

Query: 181 ASKKGLGCVLMQQCKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIS 240
           ASKKGLGCVLMQQ KVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI 
Sbjct: 392 ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 451

Query: 241 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 300
           TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Sbjct: 452 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 511

Query: 301 QAPLHRDLERAEIAVSVGAVTMQLAQLTVQSTLRQRIIGAQSNDPYLVEKRGLAEAGQAE 360
           QAPLHRDLERAEIAVSVGAVTMQLAQLTVQ TLRQRII AQSNDPYLVEKRGLAEAGQA 
Sbjct: 512 QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 571

Query: 361 GFSISSDGGLAFERRLCVPSDSVIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK 420
            FS+SSDGGL FERRLCVPSDS +KTELL+EAHSSPFSMHPGSTKMYQDLKR+YWWRNMK
Sbjct: 572 EFSLSSDGGLLFERRLCVPSDSAVKTELLAEAHSSPFSMHPGSTKMYQDLKRIYWWRNMK 631

Query: 421 REVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 480
           REVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFI GLPRTLRGFTVIWV
Sbjct: 632 REVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFIAGLPRTLRGFTVIWV 691

Query: 481 VVDRLTKSTHFVPGKSTCTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTA 540
           VVDRLTKS HFVPGKST T SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTA
Sbjct: 692 VVDRLTKSAHFVPGKSTYTTSKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTA 751

Query: 541 MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI 600
           MGTRLDFSTAFHPQTDGQTERLN+VLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI
Sbjct: 752 MGTRLDFSTAFHPQTDGQTERLNKVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI 811

Query: 601 GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELV 633
           GMAPFEALY KCCRSP+CWGEVGEQRLMGPELV
Sbjct: 812 GMAPFEALYDKCCRSPICWGEVGEQRLMGPELV 844

[Close]

BLAST of MELO.jh102038.1 vs. NCBI nr
Match: KAA0040188.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1235 bits (3195), Expect = 0.0
Identity = 612/633 (96.68%), Postives = 618/633 (97.63%), Query Frame = 0


Query: 1    MSFGLTNAPAVFMNLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 60
            MSFGLTNAPAVFM+LMNRVF+EFLDTFVIVFIDDILIYSK EAEHEEHLRIVLQTLRDNK
Sbjct: 819  MSFGLTNAPAVFMDLMNRVFKEFLDTFVIVFIDDILIYSKMEAEHEEHLRIVLQTLRDNK 878

Query: 61   LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 120
            LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR
Sbjct: 879  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 938

Query: 121  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPILTVPDGSGSFVIYSD 180
            RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAP+LTVPDGSGSFVIYSD
Sbjct: 939  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 998

Query: 181  ASKKGLGCVLMQQCKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIS 240
            ASKKGLG VLMQQ KVVAYASRQLKSHEQNYPTHDLELAAV+FALKIWRHYLYGEKIQI 
Sbjct: 999  ASKKGLGFVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVIFALKIWRHYLYGEKIQIF 1058

Query: 241  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 300
            TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Sbjct: 1059 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 1118

Query: 301  QAPLHRDLERAEIAVSVGAVTMQLAQLTVQSTLRQRIIGAQSNDPYLVEKRGLAEAGQAE 360
             APLHRDLERAEIAVSVGA+TMQLAQLTVQ TLRQRIIGAQSNDPYLVEKRGLAEAGQAE
Sbjct: 1119 HAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAE 1178

Query: 361  GFSISSDGGLAFERRLCVPSDSVIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK 420
            GFSISSDGGL FERRLCVPSDS IK ELLSEAHSSPF MHPGSTKMYQDLKRVYWWRNMK
Sbjct: 1179 GFSISSDGGLVFERRLCVPSDSAIKIELLSEAHSSPFFMHPGSTKMYQDLKRVYWWRNMK 1238

Query: 421  REVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 480
            REVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV
Sbjct: 1239 REVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 1298

Query: 481  VVDRLTKSTHFVPGKSTCTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTA 540
            VVDRLTKS HFVPGKST  ASKWAQLYMSEIVRLHGVPVSIVSDRDARFTS+FWKGLQTA
Sbjct: 1299 VVDRLTKSAHFVPGKSTYIASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSQFWKGLQTA 1358

Query: 541  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI 600
            MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI
Sbjct: 1359 MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI 1418

Query: 601  GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELV 633
            GMAPFEALY KCCRS VCWGEVGEQRLMGPELV
Sbjct: 1419 GMAPFEALYDKCCRSLVCWGEVGEQRLMGPELV 1451

[Close]

BLAST of MELO.jh102038.1 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 1.1e-97
Identity = 198/618 (32.04%), Postives = 328/618 (53.07%), Query Frame = 0


Query: 1    MSFGLTNAPAVFMNLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 60
            M +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  
Sbjct: 534  MPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNAN 593

Query: 61   LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 120
            L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R
Sbjct: 594  LIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLR 653

Query: 121  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPILTVPDGSGSFVIYSD 180
            +F+   S++  PL  L +K   + W+     + +N+KQ LV+ P+L   D S   ++ +D
Sbjct: 654  KFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETD 713

Query: 181  ASKKGLGCVLMQ-----QCKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG- 240
            AS   +G VL Q     +   V Y S ++   + NY   D E+ A++ +LK WRHYL   
Sbjct: 714  ASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLEST 773

Query: 241  -EKIQISTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV 300
             E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR  
Sbjct: 774  IEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-- 833

Query: 301  SHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQSTLRQRIIGAQSNDPYLVEKR 360
                 ++    P+ +D E   I          + Q+++    + +++   +ND  L+   
Sbjct: 834  -----IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNLL 893

Query: 361  GLAEAGQAEGFSISSDGGLAFERRLCVPSDSVIKTELLSEAHSSPFSMHPGSTKMYQDLK 420
               +    E   +     +  + ++ +P+D+ +   ++ + H     +HPG   +   + 
Sbjct: 894  NNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIIL 953

Query: 421  RVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRT 480
            R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +
Sbjct: 954  RRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES 1013

Query: 481  LRGFTVIWVVVDRLTKSTHFVPGKSTCTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTS 540
              G+  ++VVVDR +K    VP   + TA + A+++   ++   G P  I++D D  FTS
Sbjct: 1014 -SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTS 1073

Query: 541  KFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFA 600
            + WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +
Sbjct: 1074 QTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQS 1133

Query: 601  YNNSYQATIGMAPFEALY 610
            YNN+  +   M PFE ++
Sbjct: 1134 YNNAIHSATQMTPFEIVH 1135

[Close]

BLAST of MELO.jh102038.1 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 1.1e-97
Identity = 198/618 (32.04%), Postives = 328/618 (53.07%), Query Frame = 0


Query: 1    MSFGLTNAPAVFMNLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 60
            M +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  
Sbjct: 534  MPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNAN 593

Query: 61   LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 120
            L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R
Sbjct: 594  LIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLR 653

Query: 121  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPILTVPDGSGSFVIYSD 180
            +F+   S++  PL  L +K   + W+     + +N+KQ LV+ P+L   D S   ++ +D
Sbjct: 654  KFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETD 713

Query: 181  ASKKGLGCVLMQ-----QCKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG- 240
            AS   +G VL Q     +   V Y S ++   + NY   D E+ A++ +LK WRHYL   
Sbjct: 714  ASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLEST 773

Query: 241  -EKIQISTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV 300
             E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR  
Sbjct: 774  IEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-- 833

Query: 301  SHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQSTLRQRIIGAQSNDPYLVEKR 360
                 ++    P+ +D E   I          + Q+++    + +++   +ND  L+   
Sbjct: 834  -----IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNLL 893

Query: 361  GLAEAGQAEGFSISSDGGLAFERRLCVPSDSVIKTELLSEAHSSPFSMHPGSTKMYQDLK 420
               +    E   +     +  + ++ +P+D+ +   ++ + H     +HPG   +   + 
Sbjct: 894  NNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIIL 953

Query: 421  RVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRT 480
            R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +
Sbjct: 954  RRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES 1013

Query: 481  LRGFTVIWVVVDRLTKSTHFVPGKSTCTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTS 540
              G+  ++VVVDR +K    VP   + TA + A+++   ++   G P  I++D D  FTS
Sbjct: 1014 -SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTS 1073

Query: 541  KFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFA 600
            + WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +
Sbjct: 1074 QTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQS 1133

Query: 601  YNNSYQATIGMAPFEALY 610
            YNN+  +   M PFE ++
Sbjct: 1134 YNNAIHSATQMTPFEIVH 1135

[Close]

BLAST of MELO.jh102038.1 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 1.1e-97
Identity = 198/618 (32.04%), Postives = 328/618 (53.07%), Query Frame = 0


Query: 1    MSFGLTNAPAVFMNLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 60
            M +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  
Sbjct: 534  MPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNAN 593

Query: 61   LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 120
            L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R
Sbjct: 594  LIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLR 653

Query: 121  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPILTVPDGSGSFVIYSD 180
            +F+   S++  PL  L +K   + W+     + +N+KQ LV+ P+L   D S   ++ +D
Sbjct: 654  KFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETD 713

Query: 181  ASKKGLGCVLMQ-----QCKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG- 240
            AS   +G VL Q     +   V Y S ++   + NY   D E+ A++ +LK WRHYL   
Sbjct: 714  ASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLEST 773

Query: 241  -EKIQISTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV 300
             E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR  
Sbjct: 774  IEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-- 833

Query: 301  SHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQSTLRQRIIGAQSNDPYLVEKR 360
                 ++    P+ +D E   I          + Q+++    + +++   +ND  L+   
Sbjct: 834  -----IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNLL 893

Query: 361  GLAEAGQAEGFSISSDGGLAFERRLCVPSDSVIKTELLSEAHSSPFSMHPGSTKMYQDLK 420
               +    E   +     +  + ++ +P+D+ +   ++ + H     +HPG   +   + 
Sbjct: 894  NNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIIL 953

Query: 421  RVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRT 480
            R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +
Sbjct: 954  RRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES 1013

Query: 481  LRGFTVIWVVVDRLTKSTHFVPGKSTCTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTS 540
              G+  ++VVVDR +K    VP   + TA + A+++   ++   G P  I++D D  FTS
Sbjct: 1014 -SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTS 1073

Query: 541  KFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFA 600
            + WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +
Sbjct: 1074 QTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQS 1133

Query: 601  YNNSYQATIGMAPFEALY 610
            YNN+  +   M PFE ++
Sbjct: 1134 YNNAIHSATQMTPFEIVH 1135

[Close]

BLAST of MELO.jh102038.1 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 1.1e-97
Identity = 198/618 (32.04%), Postives = 328/618 (53.07%), Query Frame = 0


Query: 1    MSFGLTNAPAVFMNLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 60
            M +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  
Sbjct: 534  MPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNAN 593

Query: 61   LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 120
            L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R
Sbjct: 594  LIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLR 653

Query: 121  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPILTVPDGSGSFVIYSD 180
            +F+   S++  PL  L +K   + W+     + +N+KQ LV+ P+L   D S   ++ +D
Sbjct: 654  KFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETD 713

Query: 181  ASKKGLGCVLMQ-----QCKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG- 240
            AS   +G VL Q     +   V Y S ++   + NY   D E+ A++ +LK WRHYL   
Sbjct: 714  ASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLEST 773

Query: 241  -EKIQISTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV 300
             E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR  
Sbjct: 774  IEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-- 833

Query: 301  SHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQSTLRQRIIGAQSNDPYLVEKR 360
                 ++    P+ +D E   I          + Q+++    + +++   +ND  L+   
Sbjct: 834  -----IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNLL 893

Query: 361  GLAEAGQAEGFSISSDGGLAFERRLCVPSDSVIKTELLSEAHSSPFSMHPGSTKMYQDLK 420
               +    E   +     +  + ++ +P+D+ +   ++ + H     +HPG   +   + 
Sbjct: 894  NNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIIL 953

Query: 421  RVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRT 480
            R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +
Sbjct: 954  RRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES 1013

Query: 481  LRGFTVIWVVVDRLTKSTHFVPGKSTCTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTS 540
              G+  ++VVVDR +K    VP   + TA + A+++   ++   G P  I++D D  FTS
Sbjct: 1014 -SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTS 1073

Query: 541  KFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFA 600
            + WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +
Sbjct: 1074 QTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQS 1133

Query: 601  YNNSYQATIGMAPFEALY 610
            YNN+  +   M PFE ++
Sbjct: 1134 YNNAIHSATQMTPFEIVH 1135

[Close]

BLAST of MELO.jh102038.1 vs. ExPASy Swiss-Prot
Match: P0CT37 (Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-4 PE=3 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 1.1e-97
Identity = 198/618 (32.04%), Postives = 328/618 (53.07%), Query Frame = 0


Query: 1    MSFGLTNAPAVFMNLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 60
            M +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  
Sbjct: 534  MPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNAN 593

Query: 61   LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 120
            L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R
Sbjct: 594  LIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLR 653

Query: 121  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPILTVPDGSGSFVIYSD 180
            +F+   S++  PL  L +K   + W+     + +N+KQ LV+ P+L   D S   ++ +D
Sbjct: 654  KFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETD 713

Query: 181  ASKKGLGCVLMQ-----QCKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG- 240
            AS   +G VL Q     +   V Y S ++   + NY   D E+ A++ +LK WRHYL   
Sbjct: 714  ASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLEST 773

Query: 241  -EKIQISTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV 300
             E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR  
Sbjct: 774  IEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-- 833

Query: 301  SHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQSTLRQRIIGAQSNDPYLVEKR 360
                 ++    P+ +D E   I          + Q+++    + +++   +ND  L+   
Sbjct: 834  -----IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNLL 893

Query: 361  GLAEAGQAEGFSISSDGGLAFERRLCVPSDSVIKTELLSEAHSSPFSMHPGSTKMYQDLK 420
               +    E   +     +  + ++ +P+D+ +   ++ + H     +HPG   +   + 
Sbjct: 894  NNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIIL 953

Query: 421  RVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRT 480
            R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +
Sbjct: 954  RRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES 1013

Query: 481  LRGFTVIWVVVDRLTKSTHFVPGKSTCTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTS 540
              G+  ++VVVDR +K    VP   + TA + A+++   ++   G P  I++D D  FTS
Sbjct: 1014 -SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTS 1073

Query: 541  KFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFA 600
            + WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +
Sbjct: 1074 QTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQS 1133

Query: 601  YNNSYQATIGMAPFEALY 610
            YNN+  +   M PFE ++
Sbjct: 1134 YNNAIHSATQMTPFEIVH 1135

[Close]

BLAST of MELO.jh102038.1 vs. ExPASy TrEMBL
Match: A0A5A7UE75 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold428G00240 PE=4 SV=1)

HSP 1 Score: 1281 bits (3314), Expect = 0.0
Identity = 633/633 (100.00%), Postives = 633/633 (100.00%), Query Frame = 0


Query: 1    MSFGLTNAPAVFMNLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 60
            MSFGLTNAPAVFMNLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK
Sbjct: 882  MSFGLTNAPAVFMNLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 941

Query: 61   LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 120
            LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR
Sbjct: 942  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 1001

Query: 121  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPILTVPDGSGSFVIYSD 180
            RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPILTVPDGSGSFVIYSD
Sbjct: 1002 RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPILTVPDGSGSFVIYSD 1061

Query: 181  ASKKGLGCVLMQQCKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIS 240
            ASKKGLGCVLMQQCKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIS
Sbjct: 1062 ASKKGLGCVLMQQCKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIS 1121

Query: 241  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 300
            TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Sbjct: 1122 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 1181

Query: 301  QAPLHRDLERAEIAVSVGAVTMQLAQLTVQSTLRQRIIGAQSNDPYLVEKRGLAEAGQAE 360
            QAPLHRDLERAEIAVSVGAVTMQLAQLTVQSTLRQRIIGAQSNDPYLVEKRGLAEAGQAE
Sbjct: 1182 QAPLHRDLERAEIAVSVGAVTMQLAQLTVQSTLRQRIIGAQSNDPYLVEKRGLAEAGQAE 1241

Query: 361  GFSISSDGGLAFERRLCVPSDSVIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK 420
            GFSISSDGGLAFERRLCVPSDSVIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK
Sbjct: 1242 GFSISSDGGLAFERRLCVPSDSVIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK 1301

Query: 421  REVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 480
            REVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV
Sbjct: 1302 REVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 1361

Query: 481  VVDRLTKSTHFVPGKSTCTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTA 540
            VVDRLTKSTHFVPGKSTCTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTA
Sbjct: 1362 VVDRLTKSTHFVPGKSTCTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTA 1421

Query: 541  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI 600
            MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI
Sbjct: 1422 MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI 1481

Query: 601  GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELV 633
            GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELV
Sbjct: 1482 GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELV 1514

[Close]

BLAST of MELO.jh102038.1 vs. ExPASy TrEMBL
Match: A0A5A7U330 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G00040 PE=4 SV=1)

HSP 1 Score: 1241 bits (3210), Expect = 0.0
Identity = 614/633 (97.00%), Postives = 621/633 (98.10%), Query Frame = 0


Query: 1    MSFGLTNAPAVFMNLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 60
            MSFGLTNAPAVFM+LMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNK
Sbjct: 694  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 753

Query: 61   LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 120
            LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR
Sbjct: 754  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 813

Query: 121  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPILTVPDGSGSFVIYSD 180
            RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAP+LTVPDGSGSFVIYSD
Sbjct: 814  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 873

Query: 181  ASKKGLGCVLMQQCKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIS 240
            ASKKGLGCVLMQQ KVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI 
Sbjct: 874  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 933

Query: 241  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 300
            TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Sbjct: 934  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 993

Query: 301  QAPLHRDLERAEIAVSVGAVTMQLAQLTVQSTLRQRIIGAQSNDPYLVEKRGLAEAGQAE 360
            QAPLHRDLERAEIAVSVGAVTMQLAQLTVQ TLRQRII AQSNDPYLVEKRGLAEAGQA 
Sbjct: 994  QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 1053

Query: 361  GFSISSDGGLAFERRLCVPSDSVIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK 420
             FS+SSDGGL FERRLCVPSDSV+KTELLSEAHSSPFSMHPGSTKMY+D+KRVYWWRNMK
Sbjct: 1054 EFSLSSDGGLLFERRLCVPSDSVVKTELLSEAHSSPFSMHPGSTKMYRDVKRVYWWRNMK 1113

Query: 421  REVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 480
            REVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV
Sbjct: 1114 REVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 1173

Query: 481  VVDRLTKSTHFVPGKSTCTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTA 540
            VVDRLTKS HFVPGKST TASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWK LQTA
Sbjct: 1174 VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKSLQTA 1233

Query: 541  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI 600
            MGTRLDFSTAFHPQTDGQTERLNQVLE MLRACALEFPGSWDSHLHLMEF YNNSYQATI
Sbjct: 1234 MGTRLDFSTAFHPQTDGQTERLNQVLEYMLRACALEFPGSWDSHLHLMEFVYNNSYQATI 1293

Query: 601  GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELV 633
            GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELV
Sbjct: 1294 GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELV 1326

[Close]

BLAST of MELO.jh102038.1 vs. ExPASy TrEMBL
Match: A0A5A7UAA8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00800 PE=4 SV=1)

HSP 1 Score: 1237 bits (3200), Expect = 0.0
Identity = 612/633 (96.68%), Postives = 619/633 (97.79%), Query Frame = 0


Query: 1    MSFGLTNAPAVFMNLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 60
            MSFGLTNAPAVFM+LMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNK
Sbjct: 684  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 743

Query: 61   LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 120
            LYAKFSKCEFWLKQVSFLGHVVSKA VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR
Sbjct: 744  LYAKFSKCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 803

Query: 121  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPILTVPDGSGSFVIYSD 180
            RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAP+LTVPDGSGSFVIYSD
Sbjct: 804  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 863

Query: 181  ASKKGLGCVLMQQCKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIS 240
            ASKKGLGCVLMQQ KVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI 
Sbjct: 864  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 923

Query: 241  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 300
            TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Sbjct: 924  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 983

Query: 301  QAPLHRDLERAEIAVSVGAVTMQLAQLTVQSTLRQRIIGAQSNDPYLVEKRGLAEAGQAE 360
            QAPLHRDLERAEIAVSVGAVTMQLAQLTVQ TLRQRII AQSNDPYLVEKRGLAEAGQA 
Sbjct: 984  QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 1043

Query: 361  GFSISSDGGLAFERRLCVPSDSVIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK 420
             FS+SSDGGL+FE RLCVPSDS +KTELL EAHSSPFSMHPGSTKMYQDLKRVYWWRNMK
Sbjct: 1044 EFSLSSDGGLSFEGRLCVPSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK 1103

Query: 421  REVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 480
            REVAEFVS+CLVCQQVK PRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV
Sbjct: 1104 REVAEFVSKCLVCQQVKEPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 1163

Query: 481  VVDRLTKSTHFVPGKSTCTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTA 540
            VVDRLTKS HFVPGKST TASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTA
Sbjct: 1164 VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTA 1223

Query: 541  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI 600
            MGTRLDFSTAFHPQ DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI
Sbjct: 1224 MGTRLDFSTAFHPQADGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI 1283

Query: 601  GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELV 633
            GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELV
Sbjct: 1284 GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELV 1316

[Close]

BLAST of MELO.jh102038.1 vs. ExPASy TrEMBL
Match: A0A5A7UP94 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold126G00190 PE=4 SV=1)

HSP 1 Score: 1236 bits (3199), Expect = 0.0
Identity = 609/633 (96.21%), Postives = 619/633 (97.79%), Query Frame = 0


Query: 1   MSFGLTNAPAVFMNLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 60
           MSFGLTNAPAVFM+LMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNK
Sbjct: 212 MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 271

Query: 61  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 120
           LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR
Sbjct: 272 LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 331

Query: 121 RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPILTVPDGSGSFVIYSD 180
           RFVENFSR ATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAP+LTVPDGSGSFVIYSD
Sbjct: 332 RFVENFSRTATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 391

Query: 181 ASKKGLGCVLMQQCKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIS 240
           ASKKGLGCVLMQQ KVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI 
Sbjct: 392 ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 451

Query: 241 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 300
           TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Sbjct: 452 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 511

Query: 301 QAPLHRDLERAEIAVSVGAVTMQLAQLTVQSTLRQRIIGAQSNDPYLVEKRGLAEAGQAE 360
           QAPLHRDLERAEIAVSVGAVTMQLAQLTVQ TLRQRII AQSNDPYLVEKRGLAEAGQA 
Sbjct: 512 QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 571

Query: 361 GFSISSDGGLAFERRLCVPSDSVIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK 420
            FS+SSDGGL FERRLCVPSDS +KTELL+EAHSSPFSMHPGSTKMYQDLKR+YWWRNMK
Sbjct: 572 EFSLSSDGGLLFERRLCVPSDSAVKTELLAEAHSSPFSMHPGSTKMYQDLKRIYWWRNMK 631

Query: 421 REVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 480
           REVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFI GLPRTLRGFTVIWV
Sbjct: 632 REVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFIAGLPRTLRGFTVIWV 691

Query: 481 VVDRLTKSTHFVPGKSTCTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTA 540
           VVDRLTKS HFVPGKST T SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTA
Sbjct: 692 VVDRLTKSAHFVPGKSTYTTSKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTA 751

Query: 541 MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI 600
           MGTRLDFSTAFHPQTDGQTERLN+VLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI
Sbjct: 752 MGTRLDFSTAFHPQTDGQTERLNKVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI 811

Query: 601 GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELV 633
           GMAPFEALY KCCRSP+CWGEVGEQRLMGPELV
Sbjct: 812 GMAPFEALYDKCCRSPICWGEVGEQRLMGPELV 844

[Close]

BLAST of MELO.jh102038.1 vs. ExPASy TrEMBL
Match: A0A5A7TB42 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold118G00260 PE=4 SV=1)

HSP 1 Score: 1235 bits (3195), Expect = 0.0
Identity = 612/633 (96.68%), Postives = 618/633 (97.63%), Query Frame = 0


Query: 1    MSFGLTNAPAVFMNLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 60
            MSFGLTNAPAVFM+LMNRVF+EFLDTFVIVFIDDILIYSK EAEHEEHLRIVLQTLRDNK
Sbjct: 819  MSFGLTNAPAVFMDLMNRVFKEFLDTFVIVFIDDILIYSKMEAEHEEHLRIVLQTLRDNK 878

Query: 61   LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 120
            LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR
Sbjct: 879  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 938

Query: 121  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPILTVPDGSGSFVIYSD 180
            RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAP+LTVPDGSGSFVIYSD
Sbjct: 939  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 998

Query: 181  ASKKGLGCVLMQQCKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIS 240
            ASKKGLG VLMQQ KVVAYASRQLKSHEQNYPTHDLELAAV+FALKIWRHYLYGEKIQI 
Sbjct: 999  ASKKGLGFVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVIFALKIWRHYLYGEKIQIF 1058

Query: 241  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 300
            TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Sbjct: 1059 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 1118

Query: 301  QAPLHRDLERAEIAVSVGAVTMQLAQLTVQSTLRQRIIGAQSNDPYLVEKRGLAEAGQAE 360
             APLHRDLERAEIAVSVGA+TMQLAQLTVQ TLRQRIIGAQSNDPYLVEKRGLAEAGQAE
Sbjct: 1119 HAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAE 1178

Query: 361  GFSISSDGGLAFERRLCVPSDSVIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK 420
            GFSISSDGGL FERRLCVPSDS IK ELLSEAHSSPF MHPGSTKMYQDLKRVYWWRNMK
Sbjct: 1179 GFSISSDGGLVFERRLCVPSDSAIKIELLSEAHSSPFFMHPGSTKMYQDLKRVYWWRNMK 1238

Query: 421  REVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 480
            REVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV
Sbjct: 1239 REVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 1298

Query: 481  VVDRLTKSTHFVPGKSTCTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTA 540
            VVDRLTKS HFVPGKST  ASKWAQLYMSEIVRLHGVPVSIVSDRDARFTS+FWKGLQTA
Sbjct: 1299 VVDRLTKSAHFVPGKSTYIASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSQFWKGLQTA 1358

Query: 541  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI 600
            MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI
Sbjct: 1359 MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI 1418

Query: 601  GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELV 633
            GMAPFEALY KCCRS VCWGEVGEQRLMGPELV
Sbjct: 1419 GMAPFEALYDKCCRSLVCWGEVGEQRLMGPELV 1451

[Close]

BLAST of MELO.jh102038.1 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 120.6 bits (301), Expect = 4.7e-27
Identity = 58/131 (44.27%), Postives = 83/131 (63.36%), Query Frame = 0


Query: 48  HLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTGWTRPST 107
           HL +VLQ    ++ YA   KC F   Q+++LG  H++S  GVS DPAK+EA+ GW  P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 108 VSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPI 167
            +E+R FLGL GYYRRFV+N+ +I  PLT+L +K +   W++    +F+ LK  + T P+
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNS-LKWTEMAALAFKALKGAVTTLPV 122

Query: 168 LTVPDGSGSFV 177
           L +PD    FV
Sbjct: 123 LALPDLKLPFV 132

The following BLAST results are available for this feature:

BLAST of MELO.jh102038.1 vs. NCBI nr


Match Name	Identity	Description
KAA0053368.1	100.00	pol protein [Cucumis melo var. makuwa]	[more]
KAA0048687.1	97.00	pol protein [Cucumis melo var. makuwa]	[more]
KAA0051357.1	96.68	pol protein [Cucumis melo var. makuwa]	[more]
KAA0057672.1	96.21	pol protein [Cucumis melo var. makuwa]	[more]
KAA0040188.1	96.68	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of MELO.jh102038.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CT41	1.1e-97	32.04	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	1.1e-97	32.04	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	1.1e-97	32.04	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	1.1e-97	32.04	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT37	1.1e-97	32.04	Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of MELO.jh102038.1 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A5A7UE75	100.00	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold42...	[more]
A0A5A7U330	97.00	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43...	[more]
A0A5A7UAA8	96.68	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55...	[more]
A0A5A7UP94	96.21	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold126G00190 PE...	[more]
A0A5A7TB42	96.68	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold11...	[more]

BLAST of MELO.jh102038.1 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	4.7e-27	44.27	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 1..87 e-value: 5.9E-35 score: 122.1
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 92..182 e-value: 1.3E-30 score: 107.3
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 385..438 e-value: 5.6E-17 score: 61.5
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 1..81 e-value: 1.4E-16 score: 60.7
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 1..82 score: 9.900567
None	No IPR available	GENE3D	1.10.340.70		coord: 348..437 e-value: 4.7E-18 score: 67.2
None	No IPR available	PANTHER	PTHR45835	YALI0A06105P	coord: 374..606 coord: 102..308
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 176..291 e-value: 5.08092E-58 score: 188.856
None	No IPR available	CDD	cd01647	RT_LTR	coord: 1..82 e-value: 1.27468E-38 score: 138.497
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 173..269 e-value: 1.1E-33 score: 115.7
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 447..626 e-value: 2.6E-46 score: 159.4
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 449..612 score: 18.854795
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 450..609
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 1..275

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO.jh102038.1.t1	MELO.jh102038.1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding