MELO.jh101908.1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh101908.1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Integrase
Location	chr06: 27632604 .. 27635044 (-)
RNA-Seq Expression	MELO.jh101908.1
Synteny	MELO.jh101908.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTCTTTCTAGAACCCCTGGACGTAATGACTTTCCTGCTTGTTTCTTCCAGAAATTTTGGGATGTTACAATGGAGAAAGTGGTGCCACCATCTTTGGAAATCCATAATCGAAGGAAATCTGTGAGTGCTTTCAATCAAACTTCTATTGTGTTTATTTCGAAGAAAAATCCACTTGAGGCTTCTGATTTTTGCCTATTAGCTTATGTAATATGTGTTGAAGTTAAATTAATCTAAACTTAATACATGAATTTGCATTATTAAATATGCATGAATAGGTGAGATACATGGAATAGTTAATAATCACTAAATACATTGATATATGAATAGTCACATGTATTGATATTTATTGTTAATGACTTTTAATATACTTTTCTACTAGTATAAATATGTGTAAGGTTTCTCATTTGTAAATAAGAAAGAAAGTAAGAAATTCAAGTTTAAGAAATATTATTCAAGTTCTTTCTTCTCAATTGTGTGAATAAGAGAACAATCTTCTTCTCTTGTTTCTTGATTTGTATTGTAAGGGTCTATTACGTTTCCAACAAGTGGTATCAGAGCTCAAGTTAGATATGGCTTCAAATGGTAACATGTTGCAACCCCAACTTCCAAGGTTTAGCGGAAAGAATTTTAATCAATGGAGTATTCAAATGAAAGTGTTATATGGCTCTCAAGAATTGTGGGATATTGTTGAAAGAGGATACACTGAAGTTGAGAATCAGAGTGAGCTCACAAATCAACAACTTGTTGAGTTAAGAGAAAATCGTAAGAAAGACAAAAAGGCTTTATTCTTCATTTATCAAGCTGTTGATGAATTTATTTTCGAGAGAATTTCAACAGCTACTTCTGCAAAGGCTGCTTGGGATATTCTACGATCTACCTATCAAGGAGAAGATAAGGTAAAGATGAGAAGGTTACAAGCTCTCAGATCCGAATTTGATTGCATTAAAATGAAAGAAACTGAAACTATTGAAGAATTTTTCAATCGTATTCTTGTAATTGTCAATAGTTTAAGATCAAATGGTGAAGAAGTAGGCGATCAAAGAGTTGTTGAAAAGATTCTTAGAAGTATGCCAAGAAAATTTGAGCATATCGTCGTTGCAATTGAAGAATCGAAAGACTTATCTACGTTGTCTATAAATAGCTTGATGGGTTCTCTTCAATCCCATGAGCTAAGATTAAAACAATTTGATGTTAACCCCGAGGAAGTTTTTCAAATGCAAACTTCATTTAGAGGCGGTTCACGTGGAAGGCGTGGTGGTCATGGAAGACGAGGAGGTGGAAGAAACTATGATAATAGAAGCGGTGCAAATTCTGAAAATTCACAAGAAAGCTCTTCTTTATCTCGAGGAAGAGGAAGCGGAAGAGGAAGAGGCTTTGGCAGAAACCAAGGAGGTGGTCGTGGTAATTTCTCTCAAATTCAATGCTTTAATTGCGGAAAGTATGGTCATTTTCAAGCAAATTGTTGGGCACTAAAAAATGGAGTTGGAAATACCACCATGAATATGCATAAAGAACAAAAGAAAATTGATGAAGGCATTCTATTCCTCGCATGTAGTGTTCAAGACGATGTTGTAGAGCCTACATGGTATCTTGATAGTGGTTGTAGCAACCACATGACAGGAAATAGAAGTATATTTGTTACTTTGGATGAATCTTTCCAAAGTGAAGTGAAAACTGGTGATAATACCAGACTACAAGTCAAAGGCCAAGGTGATATTCTTGTGAAGACAAAGAAAGGGACAAAACGAGTTACAAATGTGTTCTATGTTCCAGGTCTAAAGCATAATCTTTTGAGTATTGGCCAACTGCTTCAACGAGGTTTAAAAGTTTCATTTGAAGGTGACATATGTGCAATCAAAGATCAGGCCGGTGTTCTTATTGCCAAGGTAAAAATGACTGCTAATAAGATGTTTCCTCTTAACTTTACATATGGTCAAATATCTTGCTTCAGCAGCATATTGAAGGATCCATCCTGGCTTTGGCATTTTAGATATGGTCACTTAAACTTCAAATCACTATCTTATTTGTGCAAAAATCATATGGTGAGAGGTATACAAAATATCAACCATGAGACAAATATTTGTGAAGTGTGTATTCTTGCAAAACATCATCGAGATTCATTTCCAACTGGGAAAGCTTGGAGAGCCTCTAAACCTCTCGAGTTGATTCATACAGATTTGTGTGGTCCTATGCGAACAACAACAAATGGAGGTAATCGATATTTCATAACCTTCATCGATGATTTCAGTAGAAAGTTGTGGATTTATTTTTTGAAAGAAAAGAGTGAAGCACTTGTATGTTTTAAATCCTTCAAAGCTTTTACTGAAAATCAAAGTGGTTACAAGATAAAAACATTGAGATCTGACCGTGGTGGAGAATATATAGCTTTTGGTAATTTTTTCAAGGAGCAAGGAATTCATCATCAAATGACAGCTTGA

mRNA sequence

ATGGGTCTTTCTAGAACCCCTGGACGTAATGACTTTCCTGCTTGTTTCTTCCAGAAATTTTGGGATGTTACAATGGAGAAAGTGGTGCCACCATCTTTGGAAATCCATAATCGAAGGAAATCTGTGAGTGCTTTCAATCAAACTTCTATTGTGTTTATTTCGAAGAAAAATCCACTTGAGGCTTCTGATTTTTGCCTATTAGCTTATGGTCTATTACGTTTCCAACAAGTGGTATCAGAGCTCAAGTTAGATATGGCTTCAAATGGTAACATGTTGCAACCCCAACTTCCAAGGTTTAGCGGAAAGAATTTTAATCAATGGAGTATTCAAATGAAAGTGTTATATGGCTCTCAAGAATTGTGGGATATTGTTGAAAGAGGATACACTGAAGTTGAGAATCAGAGTGAGCTCACAAATCAACAACTTGTTGAGTTAAGAGAAAATCGTAAGAAAGACAAAAAGGCTTTATTCTTCATTTATCAAGCTGTTGATGAATTTATTTTCGAGAGAATTTCAACAGCTACTTCTGCAAAGGCTGCTTGGGATATTCTACGATCTACCTATCAAGGAGAAGATAAGGTAAAGATGAGAAGGTTACAAGCTCTCAGATCCGAATTTGATTGCATTAAAATGAAAGAAACTGAAACTATTGAAGAATTTTTCAATCGTATTCTTGTAATTGTCAATAGTTTAAGATCAAATGGTGAAGAAGTAGGCGATCAAAGAGTTGTTGAAAAGATTCTTAGAAGTATGCCAAGAAAATTTGAGCATATCGTCGTTGCAATTGAAGAATCGAAAGACTTATCTACGTTGTCTATAAATAGCTTGATGGGTTCTCTTCAATCCCATGAGCTAAGATTAAAACAATTTGATGTTAACCCCGAGGAAGTTTTTCAAATGCAAACTTCATTTAGAGGCGGTTCACGTGGAAGGCGTGGTGGTCATGGAAGACGAGGAGGTGGAAGAAACTATGATAATAGAAGCGGTGCAAATTCTGAAAATTCACAAGAAAGCTCTTCTTTATCTCGAGGAAGAGGAAGCGGAAGAGGAAGAGGCTTTGGCAGAAACCAAGGAGGTGGTCGTGGTAATTTCTCTCAAATTCAATGCTTTAATTGCGGAAAGTATGGTCATTTTCAAGCAAATTGTTGGGCACTAAAAAATGGAGTTGGAAATACCACCATGAATATGCATAAAGAACAAAAGAAAATTGATGAAGGCATTCTATTCCTCGCATGTAGTGTTCAAGACGATGTTGTAGAGCCTACATGGTATCTTGATAGTGGTTGTAGCAACCACATGACAGGAAATAGAAGTATATTTGTTACTTTGGATGAATCTTTCCAAAGTGAAGTGAAAACTGGTGATAATACCAGACTACAAGTCAAAGGCCAAGGTGATATTCTTGTGAAGACAAAGAAAGGGACAAAACGAGTTACAAATGTGTTCTATGTTCCAGGTCTAAAGCATAATCTTTTGAGTATTGGCCAACTGCTTCAACGAGGTTTAAAAGTTTCATTTGAAGGTGACATATGTGCAATCAAAGATCAGGCCGGTGTTCTTATTGCCAAGGTAAAAATGACTGCTAATAAGATGTTTCCTCTTAACTTTACATATGGTCAAATATCTTGCTTCAGCAGCATATTGAAGGATCCATCCTGGCTTTGGCATTTTAGATATGGTCACTTAAACTTCAAATCACTATCTTATTTGTGCAAAAATCATATGGTGAGAGGTATACAAAATATCAACCATGAGACAAATATTTGTGAAGTGTGTATTCTTGCAAAACATCATCGAGATTCATTTCCAACTGGGAAAGCTTGGAGAGCCTCTAAACCTCTCGAGTTGATTCATACAGATTTGTGTGGTCCTATGCGAACAACAACAAATGGAGGTAATCGATATTTCATAACCTTCATCGATGATTTCAGTAGAAAGTTGTGGATTTATTTTTTGAAAGAAAAGAGTGAAGCACTTGTATGTTTTAAATCCTTCAAAGCTTTTACTGAAAATCAAAGTGGTTACAAGATAAAAACATTGAGATCTGACCGTGGTGGAGAATATATAGCTTTTGGTAATTTTTTCAAGGAGCAAGGAATTCATCATCAAATGACAGCTTGA

Coding sequence (CDS)

ATGGGTCTTTCTAGAACCCCTGGACGTAATGACTTTCCTGCTTGTTTCTTCCAGAAATTTTGGGATGTTACAATGGAGAAAGTGGTGCCACCATCTTTGGAAATCCATAATCGAAGGAAATCTGTGAGTGCTTTCAATCAAACTTCTATTGTGTTTATTTCGAAGAAAAATCCACTTGAGGCTTCTGATTTTTGCCTATTAGCTTATGGTCTATTACGTTTCCAACAAGTGGTATCAGAGCTCAAGTTAGATATGGCTTCAAATGGTAACATGTTGCAACCCCAACTTCCAAGGTTTAGCGGAAAGAATTTTAATCAATGGAGTATTCAAATGAAAGTGTTATATGGCTCTCAAGAATTGTGGGATATTGTTGAAAGAGGATACACTGAAGTTGAGAATCAGAGTGAGCTCACAAATCAACAACTTGTTGAGTTAAGAGAAAATCGTAAGAAAGACAAAAAGGCTTTATTCTTCATTTATCAAGCTGTTGATGAATTTATTTTCGAGAGAATTTCAACAGCTACTTCTGCAAAGGCTGCTTGGGATATTCTACGATCTACCTATCAAGGAGAAGATAAGGTAAAGATGAGAAGGTTACAAGCTCTCAGATCCGAATTTGATTGCATTAAAATGAAAGAAACTGAAACTATTGAAGAATTTTTCAATCGTATTCTTGTAATTGTCAATAGTTTAAGATCAAATGGTGAAGAAGTAGGCGATCAAAGAGTTGTTGAAAAGATTCTTAGAAGTATGCCAAGAAAATTTGAGCATATCGTCGTTGCAATTGAAGAATCGAAAGACTTATCTACGTTGTCTATAAATAGCTTGATGGGTTCTCTTCAATCCCATGAGCTAAGATTAAAACAATTTGATGTTAACCCCGAGGAAGTTTTTCAAATGCAAACTTCATTTAGAGGCGGTTCACGTGGAAGGCGTGGTGGTCATGGAAGACGAGGAGGTGGAAGAAACTATGATAATAGAAGCGGTGCAAATTCTGAAAATTCACAAGAAAGCTCTTCTTTATCTCGAGGAAGAGGAAGCGGAAGAGGAAGAGGCTTTGGCAGAAACCAAGGAGGTGGTCGTGGTAATTTCTCTCAAATTCAATGCTTTAATTGCGGAAAGTATGGTCATTTTCAAGCAAATTGTTGGGCACTAAAAAATGGAGTTGGAAATACCACCATGAATATGCATAAAGAACAAAAGAAAATTGATGAAGGCATTCTATTCCTCGCATGTAGTGTTCAAGACGATGTTGTAGAGCCTACATGGTATCTTGATAGTGGTTGTAGCAACCACATGACAGGAAATAGAAGTATATTTGTTACTTTGGATGAATCTTTCCAAAGTGAAGTGAAAACTGGTGATAATACCAGACTACAAGTCAAAGGCCAAGGTGATATTCTTGTGAAGACAAAGAAAGGGACAAAACGAGTTACAAATGTGTTCTATGTTCCAGGTCTAAAGCATAATCTTTTGAGTATTGGCCAACTGCTTCAACGAGGTTTAAAAGTTTCATTTGAAGGTGACATATGTGCAATCAAAGATCAGGCCGGTGTTCTTATTGCCAAGGTAAAAATGACTGCTAATAAGATGTTTCCTCTTAACTTTACATATGGTCAAATATCTTGCTTCAGCAGCATATTGAAGGATCCATCCTGGCTTTGGCATTTTAGATATGGTCACTTAAACTTCAAATCACTATCTTATTTGTGCAAAAATCATATGGTGAGAGGTATACAAAATATCAACCATGAGACAAATATTTGTGAAGTGTGTATTCTTGCAAAACATCATCGAGATTCATTTCCAACTGGGAAAGCTTGGAGAGCCTCTAAACCTCTCGAGTTGATTCATACAGATTTGTGTGGTCCTATGCGAACAACAACAAATGGAGGTAATCGATATTTCATAACCTTCATCGATGATTTCAGTAGAAAGTTGTGGATTTATTTTTTGAAAGAAAAGAGTGAAGCACTTGTATGTTTTAAATCCTTCAAAGCTTTTACTGAAAATCAAAGTGGTTACAAGATAAAAACATTGAGATCTGACCGTGGTGGAGAATATATAGCTTTTGGTAATTTTTTCAAGGAGCAAGGAATTCATCATCAAATGACAGCTTGA

Protein sequence

MGLSRTPGRNDFPACFFQKFWDVTMEKVVPPSLEIHNRRKSVSAFNQTSIVFISKKNPLEASDFCLLAYGLLRFQQVVSELKLDMASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVELRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDILRSTYQGEDKVKMRRLQALRSEFDCIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEESKDLSTLSINSLMGSLQSHELRLKQFDVNPEEVFQMQTSFRGGSRGRRGGHGRRGGGRNYDNRSGANSENSQESSSLSRGRGSGRGRGFGRNQGGGRGNFSQIQCFNCGKYGHFQANCWALKNGVGNTTMNMHKEQKKIDEGILFLACSVQDDVVEPTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAIKDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGPMRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGNFFKEQGIHHQMTA

Homology

[Close]

BLAST of MELO.jh101908.1 vs. NCBI nr
Match: KAA0060690.1 (integrase [Cucumis melo var. makuwa])

HSP 1 Score: 1328 bits (3438), Expect = 0.0
Identity = 672/706 (95.18%), Postives = 673/706 (95.33%), Query Frame = 0


Query: 1   MGLSRTPGRNDFPACFFQKFWDVTMEKVVPPSLEIHNRRKSVSAFNQTSIVFISKKNPLE 60
           MGLSRTPG  DFPACFFQKFWDVTMEKVVPPSLEIHNRRKS                   
Sbjct: 1   MGLSRTPGPYDFPACFFQKFWDVTMEKVVPPSLEIHNRRKS------------------- 60

Query: 61  ASDFCLLAYGLLRFQQVVSELKLDMASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQEL 120
                    GLLRFQQVVSELKLDMASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQEL
Sbjct: 61  ---------GLLRFQQVVSELKLDMASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQEL 120

Query: 121 WDIVERGYTEVENQSELTNQQLVELRENRKKDKKALFFIYQAVDEFIFERISTATSAKAA 180
           WDIVERGYTEVENQSELTNQQLVELRENRKKDKKALFFIYQAVDEFIFERISTATSAKAA
Sbjct: 121 WDIVERGYTEVENQSELTNQQLVELRENRKKDKKALFFIYQAVDEFIFERISTATSAKAA 180

Query: 181 WDILRSTYQGEDKVKMRRLQALRSEFDCIKMKETETIEEFFNRILVIVNSLRSNGEEVGD 240
           WDILRSTYQGEDKVKM RLQALRSEFDCIKMKETETIEEFFNRILVIVNSLRSNGEEVGD
Sbjct: 181 WDILRSTYQGEDKVKMIRLQALRSEFDCIKMKETETIEEFFNRILVIVNSLRSNGEEVGD 240

Query: 241 QRVVEKILRSMPRKFEHIVVAIEESKDLSTLSINSLMGSLQSHELRLKQFDVNPEEVFQM 300
           QRVVEKILRSMPRKFEHIVVAIEESKDLSTLSINSLMGSLQSHELRLKQFD NPEE FQM
Sbjct: 241 QRVVEKILRSMPRKFEHIVVAIEESKDLSTLSINSLMGSLQSHELRLKQFDDNPEEAFQM 300

Query: 301 QTSFRGGSRGRRGGHGRRGGGRNYDNRSGANSENSQESSSLSRGRGSGRGRGFGRNQGGG 360
           QTSFRGGSRGRRGGHGRRGGGRNYDNRSGANSENSQESSSLSRGRGSGRGRGFGRNQGGG
Sbjct: 301 QTSFRGGSRGRRGGHGRRGGGRNYDNRSGANSENSQESSSLSRGRGSGRGRGFGRNQGGG 360

Query: 361 RGNFSQIQCFNCGKYGHFQANCWALKNGVGNTTMNMHKEQKKIDEGILFLACSVQDDVVE 420
           RGNFSQIQCFNCGKYGHFQANCWALKNGVGNTTMNMHKEQKKIDEGILFLACSVQD+VVE
Sbjct: 361 RGNFSQIQCFNCGKYGHFQANCWALKNGVGNTTMNMHKEQKKIDEGILFLACSVQDNVVE 420

Query: 421 PTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTN 480
           PTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTN
Sbjct: 421 PTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTN 480

Query: 481 VFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAIKDQAGVLIAKVKMTANKMFPLNFTYGQ 540
           VFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAIKDQAGVLIAKVKMTANKMFPLNFTYGQ
Sbjct: 481 VFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAIKDQAGVLIAKVKMTANKMFPLNFTYGQ 540

Query: 541 ISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCILAKHHRD 600
           ISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCILAKHHRD
Sbjct: 541 ISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCILAKHHRD 600

Query: 601 SFPTGKAWRASKPLELIHTDLCGPMRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALV 660
           SFPTGKAWRASKPLELIHTDLCGPMRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALV
Sbjct: 601 SFPTGKAWRASKPLELIHTDLCGPMRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALV 660

Query: 661 CFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGNFFKEQGIHHQMTA 706
           CFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGNFFKEQGIHHQMTA
Sbjct: 661 CFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGNFFKEQGIHHQMTA 678

[Close]

BLAST of MELO.jh101908.1 vs. NCBI nr
Match: TYK16225.1 (integrase [Cucumis melo var. makuwa])

HSP 1 Score: 1263 bits (3269), Expect = 0.0
Identity = 636/647 (98.30%), Postives = 640/647 (98.92%), Query Frame = 0


Query: 60   EASDFCLLAYGLLRFQQVVSELKLDMASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQE 119
            E++  CL   GLLRFQQVVSEL+LDMASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQE
Sbjct: 443  ESAARCL--QGLLRFQQVVSELRLDMASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQE 502

Query: 120  LWDIVERGYTEVENQSELTNQQLVELRENRKKDKKALFFIYQAVDEFIFERISTATSAKA 179
            LWDIVERGYTEVENQSELTNQQLVELRENRKKDKKALFFIYQAVDEFIFERISTATSAKA
Sbjct: 503  LWDIVERGYTEVENQSELTNQQLVELRENRKKDKKALFFIYQAVDEFIFERISTATSAKA 562

Query: 180  AWDILRSTYQGEDKVKMRRLQALRSEFDCIKMKETETIEEFFNRILVIVNSLRSNGEEVG 239
            AWDILRSTYQGEDKVKM RLQALRSEFDCIKMKETETIEEFFNRILVIVNSLRSNGEEVG
Sbjct: 563  AWDILRSTYQGEDKVKMIRLQALRSEFDCIKMKETETIEEFFNRILVIVNSLRSNGEEVG 622

Query: 240  DQRVVEKILRSMPRKFEHIVVAIEESKDLSTLSINSLMGSLQSHELRLKQFDVNPEEVFQ 299
            DQRVVEKILRSMPRKFEHIVVAIEESKDLSTLSINSLMGSLQSHELRLKQFDVNPEE FQ
Sbjct: 623  DQRVVEKILRSMPRKFEHIVVAIEESKDLSTLSINSLMGSLQSHELRLKQFDVNPEEAFQ 682

Query: 300  MQTSFRGGSRGRRGGHGRRGGGRNYDNRSGANSENSQESSSLSRGRGSGRGRGFGRNQGG 359
            MQTSFRGGSRGRRGGHGRRGGGRNYDNRSGANSENSQESSSLSRGRGSGRGRGFGRNQGG
Sbjct: 683  MQTSFRGGSRGRRGGHGRRGGGRNYDNRSGANSENSQESSSLSRGRGSGRGRGFGRNQGG 742

Query: 360  GRGNFSQIQCFNCGKYGHFQANCWALKNGVGNTTMNMHKEQKKIDEGILFLACSVQDDVV 419
            GRGNFSQIQCFNCGKYGHFQANCWALKNGVGNTTMNMHKEQKKIDEGILFLACSVQD+VV
Sbjct: 743  GRGNFSQIQCFNCGKYGHFQANCWALKNGVGNTTMNMHKEQKKIDEGILFLACSVQDNVV 802

Query: 420  EPTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVT 479
            EPTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVT
Sbjct: 803  EPTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVT 862

Query: 480  NVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAIKDQAGVLIAKVKMTANKMFPLNFTYG 539
            NVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAIKDQAGVLIAKVKMTANKMFPLNFTYG
Sbjct: 863  NVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAIKDQAGVLIAKVKMTANKMFPLNFTYG 922

Query: 540  QISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCILAKHHR 599
            QISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCILAKHHR
Sbjct: 923  QISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCILAKHHR 982

Query: 600  DSFPTGKAWRASKPLELIHTDLCGPMRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEAL 659
            DSFPTGKAWRASKPLELIHTDLCGPMRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEAL
Sbjct: 983  DSFPTGKAWRASKPLELIHTDLCGPMRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEAL 1042

Query: 660  VCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGNFFKEQGIHHQMTA 706
            VCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGNFFKEQGIHHQMTA
Sbjct: 1043 VCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGNFFKEQGIHHQMTA 1087

[Close]

BLAST of MELO.jh101908.1 vs. NCBI nr
Match: KAA0051603.1 (integrase [Cucumis melo var. makuwa])

HSP 1 Score: 1247 bits (3226), Expect = 0.0
Identity = 623/629 (99.05%), Postives = 627/629 (99.68%), Query Frame = 0


Query: 78  VSELKLDMASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSEL 137
           ++EL+LDMASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSEL
Sbjct: 34  IAELRLDMASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSEL 93

Query: 138 TNQQLVELRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDILRSTYQGEDKVKMR 197
           TNQQLVELRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDILRSTYQGEDKVKM 
Sbjct: 94  TNQQLVELRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDILRSTYQGEDKVKMI 153

Query: 198 RLQALRSEFDCIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEH 257
           RLQALRSEFDCIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEH
Sbjct: 154 RLQALRSEFDCIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEH 213

Query: 258 IVVAIEESKDLSTLSINSLMGSLQSHELRLKQFDVNPEEVFQMQTSFRGGSRGRRGGHGR 317
           IVVAIEESKDLSTLSINSLMGSLQSHELRLKQFDVNPEE FQMQTSFRGGSRGRRGGHGR
Sbjct: 214 IVVAIEESKDLSTLSINSLMGSLQSHELRLKQFDVNPEEAFQMQTSFRGGSRGRRGGHGR 273

Query: 318 RGGGRNYDNRSGANSENSQESSSLSRGRGSGRGRGFGRNQGGGRGNFSQIQCFNCGKYGH 377
           RGGGRNYDNRSGANSENSQESSSLSRGRGSGRGRGFGRNQGGGRGNFSQIQCFNCGKYGH
Sbjct: 274 RGGGRNYDNRSGANSENSQESSSLSRGRGSGRGRGFGRNQGGGRGNFSQIQCFNCGKYGH 333

Query: 378 FQANCWALKNGVGNTTMNMHKEQKKIDEGILFLACSVQDDVVEPTWYLDSGCSNHMTGNR 437
           FQANCWALKNGVGNTTMNMHKEQKKIDEGILFLACSVQD+VVEPTWYLDSGCSNHMTGNR
Sbjct: 334 FQANCWALKNGVGNTTMNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNR 393

Query: 438 SIFVTLDESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQL 497
           SIFVTLDESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQL
Sbjct: 394 SIFVTLDESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQL 453

Query: 498 LQRGLKVSFEGDICAIKDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHF 557
           LQRGLKVSFEGDICAIKDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHF
Sbjct: 454 LQRGLKVSFEGDICAIKDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHF 513

Query: 558 RYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELI 617
           RYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELI
Sbjct: 514 RYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELI 573

Query: 618 HTDLCGPMRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKI 677
           HTDLCGPMRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKI
Sbjct: 574 HTDLCGPMRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKI 633

Query: 678 KTLRSDRGGEYIAFGNFFKEQGIHHQMTA 706
           KTLRSDRGGEYIAFGNFFKEQGIHHQMTA
Sbjct: 634 KTLRSDRGGEYIAFGNFFKEQGIHHQMTA 662

[Close]

BLAST of MELO.jh101908.1 vs. NCBI nr
Match: TYJ95504.1 (integrase [Cucumis melo var. makuwa] >TYK08522.1 integrase [Cucumis melo var. makuwa] >TYK12883.1 integrase [Cucumis melo var. makuwa] >TYK20599.1 integrase [Cucumis melo var. makuwa])

HSP 1 Score: 1237 bits (3200), Expect = 0.0
Identity = 619/622 (99.52%), Postives = 620/622 (99.68%), Query Frame = 0


Query: 85  MASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVE 144
           MASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVE
Sbjct: 1   MASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVE 60

Query: 145 LRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDILRSTYQGEDKVKMRRLQALRS 204
           LRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDILRSTYQGEDKVKM RLQALRS
Sbjct: 61  LRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDILRSTYQGEDKVKMIRLQALRS 120

Query: 205 EFDCIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEE 264
           EFDCIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEE
Sbjct: 121 EFDCIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEE 180

Query: 265 SKDLSTLSINSLMGSLQSHELRLKQFDVNPEEVFQMQTSFRGGSRGRRGGHGRRGGGRNY 324
           SKDLSTLSINSLMGSLQSHELRLKQFDVNPEE FQMQTSFRGGSRGRRGGHGRRGGGRNY
Sbjct: 181 SKDLSTLSINSLMGSLQSHELRLKQFDVNPEEAFQMQTSFRGGSRGRRGGHGRRGGGRNY 240

Query: 325 DNRSGANSENSQESSSLSRGRGSGRGRGFGRNQGGGRGNFSQIQCFNCGKYGHFQANCWA 384
           DNRSGANSENSQESSSLSRGRGSGRGRGFGRNQGGGRGNFSQIQCFNCGKYGHFQANCWA
Sbjct: 241 DNRSGANSENSQESSSLSRGRGSGRGRGFGRNQGGGRGNFSQIQCFNCGKYGHFQANCWA 300

Query: 385 LKNGVGNTTMNMHKEQKKIDEGILFLACSVQDDVVEPTWYLDSGCSNHMTGNRSIFVTLD 444
           LKNGVGNTTMNMHKEQKKIDEGILFLACSVQD+VVEPTWYLDSGCSNHMTGNRSIFVTLD
Sbjct: 301 LKNGVGNTTMNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLD 360

Query: 445 ESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKV 504
           ESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKV
Sbjct: 361 ESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKV 420

Query: 505 SFEGDICAIKDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNF 564
           SFEGDICAIKDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNF
Sbjct: 421 SFEGDICAIKDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNF 480

Query: 565 KSLSYLCKNHMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGP 624
           KSLSYLCKNHMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGP
Sbjct: 481 KSLSYLCKNHMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGP 540

Query: 625 MRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDR 684
           MRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDR
Sbjct: 541 MRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDR 600

Query: 685 GGEYIAFGNFFKEQGIHHQMTA 706
           GGEYIAFGNFFKEQGIHHQMTA
Sbjct: 601 GGEYIAFGNFFKEQGIHHQMTA 622

[Close]

BLAST of MELO.jh101908.1 vs. NCBI nr
Match: KAA0039947.1 (integrase [Cucumis melo var. makuwa])

HSP 1 Score: 1237 bits (3200), Expect = 0.0
Identity = 619/622 (99.52%), Postives = 620/622 (99.68%), Query Frame = 0


Query: 85  MASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVE 144
           MASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVE
Sbjct: 1   MASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVE 60

Query: 145 LRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDILRSTYQGEDKVKMRRLQALRS 204
           LRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDILRSTYQGEDKVKM RLQALRS
Sbjct: 61  LRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDILRSTYQGEDKVKMIRLQALRS 120

Query: 205 EFDCIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEE 264
           EFDCIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEE
Sbjct: 121 EFDCIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEE 180

Query: 265 SKDLSTLSINSLMGSLQSHELRLKQFDVNPEEVFQMQTSFRGGSRGRRGGHGRRGGGRNY 324
           SKDLSTLSINSLMGSLQSHELRLKQFDVNPEE FQMQTSFRGGSRGRRGGHGRRGGGRNY
Sbjct: 181 SKDLSTLSINSLMGSLQSHELRLKQFDVNPEEAFQMQTSFRGGSRGRRGGHGRRGGGRNY 240

Query: 325 DNRSGANSENSQESSSLSRGRGSGRGRGFGRNQGGGRGNFSQIQCFNCGKYGHFQANCWA 384
           DNRSGANSENSQESSSLSRGRGSGRGRGFGRNQGGGRGNFSQIQCFNCGKYGHFQANCWA
Sbjct: 241 DNRSGANSENSQESSSLSRGRGSGRGRGFGRNQGGGRGNFSQIQCFNCGKYGHFQANCWA 300

Query: 385 LKNGVGNTTMNMHKEQKKIDEGILFLACSVQDDVVEPTWYLDSGCSNHMTGNRSIFVTLD 444
           LKNGVGNTTMNMHKEQKKIDEGILFLACSVQD+VVEPTWYLDSGCSNHMTGNRSIFVTLD
Sbjct: 301 LKNGVGNTTMNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLD 360

Query: 445 ESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKV 504
           ESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKV
Sbjct: 361 ESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKV 420

Query: 505 SFEGDICAIKDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNF 564
           SFEGDICAIKDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNF
Sbjct: 421 SFEGDICAIKDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNF 480

Query: 565 KSLSYLCKNHMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGP 624
           KSLSYLCKNHMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGP
Sbjct: 481 KSLSYLCKNHMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGP 540

Query: 625 MRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDR 684
           MRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDR
Sbjct: 541 MRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDR 600

Query: 685 GGEYIAFGNFFKEQGIHHQMTA 706
           GGEYIAFGNFFKEQGIHHQMTA
Sbjct: 601 GGEYIAFGNFFKEQGIHHQMTA 622

[Close]

BLAST of MELO.jh101908.1 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 1.1e-45
Identity = 162/625 (25.92%), Postives = 279/625 (44.64%), Query Frame = 0


Query: 95  QLPRFSGKN-FNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVELRENRKKDK 154
           ++ +F+G N F+ W  +M+ L   Q L  +++    + +    +  +   +L      D+
Sbjct: 7   EVAKFNGDNGFSTWQRRMRDLLIQQGLHKVLD---VDSKKPDTMKAEDWADL------DE 66

Query: 155 KALFFIYQAVDEFIFERISTATSAKAAWDILRSTYQGEDKVKMRRLQALRSEFDCIKMKE 214
           +A   I   + + +   I    +A+  W  L S Y    K    +L  L+ +   + M E
Sbjct: 67  RAASAIRLHLSDDVVNNIIDEDTARGIWTRLESLYM--SKTLTNKLY-LKKQLYALHMSE 126

Query: 215 TETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEESKDLSTLSI 274
                   N    ++  L + G ++ ++     +L S+P  ++++   I   K  +T+ +
Sbjct: 127 GTNFLSHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGK--TTIEL 186

Query: 275 NSLMGSLQSHELRLKQFDVNPEEVFQMQTSFRGGSRGRRGGHGRRGGGRNYDNRSGANSE 334
             +  +L  +E   K+    PE   Q   +               G GR+Y         
Sbjct: 187 KDVTSALLLNEKMRKK----PENQGQALIT--------------EGRGRSY--------- 246

Query: 335 NSQESSSLSRGRGSGRGRGFGRNQGGGRGNFSQIQCFNCGKYGHFQANCWALKNGVGNTT 394
              + SS + GR   RG+   R++   R       C+NC + GHF+ +C   + G G T+
Sbjct: 247 ---QRSSNNYGRSGARGKSKNRSKSRVR------NCYNCNQPGHFKRDCPNPRKGKGETS 306

Query: 395 MNMHKEQ-----KKIDEGILFLACSVQDDVV-----EPTWYLDSGCSNHMTGNRSIFVTL 454
              + +      +  D  +LF+  + +++ +     E  W +D+  S+H T  R +F   
Sbjct: 307 GQKNDDNTAAMVQNNDNVVLFI--NEEEECMHLSGPESEWVVDTAASHHATPVRDLFCRY 366

Query: 455 DESFQSEVKTGDNTRLQVKGQGDILVKTKKG-TKRVTNVFYVPGLKHNLLSIGQLLQRGL 514
                  VK G+ +  ++ G GDI +KT  G T  + +V +VP L+ NL+S   L + G 
Sbjct: 367 VAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHVPDLRMNLISGIALDRDGY 426

Query: 515 KVSFEGDICAIKDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHL 574
           +  F      +    G L+    +    ++  N    Q    ++  +    LWH R GH+
Sbjct: 427 ESYFANQKWRL--TKGSLVIAKGVARGTLYRTNAEICQGELNAAQDEISVDLWHKRMGHM 486

Query: 575 NFKSLSYLCKNHMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLC 634
           + K L  L K  ++   +        C+ C+  K HR SF T    R    L+L+++D+C
Sbjct: 487 SEKGLQILAKKSLISYAKGTT--VKPCDYCLFGKQHRVSFQTSSE-RKLNILDLVYSDVC 546

Query: 635 GPMRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRS 694
           GPM   + GGN+YF+TFIDD SRKLW+Y LK K +    F+ F A  E ++G K+K LRS
Sbjct: 547 GPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGRKLKRLRS 574

Query: 695 DRGGEYIA--FGNFFKEQGIHHQMT 706
           D GGEY +  F  +    GI H+ T
Sbjct: 607 DNGGEYTSREFEEYCSSHGIRHEKT 574

[Close]

BLAST of MELO.jh101908.1 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 4.3e-34
Identity = 147/632 (23.26%), Postives = 280/632 (44.30%), Query Frame = 0


Query: 80  ELKLDMASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYT--EVENQSEL 139
           EL L+  S  N+    + + +  N+  WS Q+  L+   EL   ++   T       ++ 
Sbjct: 7   ELVLNNTSILNVNMSNVTKLTSTNYLMWSRQVHALFDGYELAGFLDGSTTMPPATIGTDA 66

Query: 140 TNQQLVELRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDILRSTYQGEDKVKMR 199
             +   +    +++DK     +  A+   +   +S AT+A   W+ LR  Y       + 
Sbjct: 67  APRVNPDYTRWKRQDKLIYSAVLGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVT 126

Query: 200 RLQALRSEFDCIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEH 259
           +L+    ++     K T+TI+++   ++   + L   G+ +     VE++L ++P +++ 
Sbjct: 127 QLRTQLKQW----TKGTKTIDDYMQGLVTRFDQLALLGKPMDHDEQVERVLENLPEEYKP 186

Query: 260 IVVAIEESKDLSTLS-INSLMGSLQSHELRLKQFDVNPEEVFQMQTSFRGGSRGRRGGHG 319
           ++  I       TL+ I+  + + +S  L +    V P  +     S R  +      +G
Sbjct: 187 VIDQIAAKDTPPTLTEIHERLLNHESKILAVSSATVIP--ITANAVSHRNTTTTNNNNNG 246

Query: 320 RRGGGRNYDNRSGANSENSQESSSLSRGRGSGRGRGFGRNQGGGRGNFSQIQCFNCGKYG 379
            R     YDNR+  N+    + SS +          F  N    +      +C  CG  G
Sbjct: 247 NR--NNRYDNRNNNNNSKPWQQSSTN----------FHPNNNQSKPYLG--KCQICGVQG 306

Query: 380 HFQANCWALKNGVGNTTMNMHKEQKKIDEGILFLACSVQDDVVEPTWYLDSGCSNHMTGN 439
           H    C  L++ +  +++N  +              ++        W LDSG ++H+T +
Sbjct: 307 HSAKRCSQLQHFL--SSVNSQQPPSPFTPWQPRANLALGSPYSSNNWLLDSGATHHITSD 366

Query: 440 -RSIFVTLDESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIG 499
             ++ +    +   +V   D + + +   G   + TK     + N+ YVP +  NL+S+ 
Sbjct: 367 FNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKSRPLNLHNILYVPNIHKNLISVY 426

Query: 500 QLLQ-RGLKVSFEGDICAIKD-QAGVLIAKVKMTANKMFPLNFTYGQ-ISCFSS-ILKDP 559
           +L    G+ V F      +KD   GV + + K T ++++       Q +S F+S   K  
Sbjct: 427 RLCNANGVSVEFFPASFQVKDLNTGVPLLQGK-TKDELYEWPIASSQPVSLFASPSSKAT 486

Query: 560 SWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRAS 619
              WH R GH     L+ +  N+ +  + N +H+   C  C++ K ++  F +     ++
Sbjct: 487 HSSWHARLGHPAPSILNSVISNYSL-SVLNPSHKFLSCSDCLINKSNKVPF-SQSTINST 546

Query: 620 KPLELIHTDL-CGPMRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTE 679
           +PLE I++D+   P+ +  N   RY++ F+D F+R  W+Y LK+KS+    F +FK   E
Sbjct: 547 RPLEYIYSDVWSSPILSHDN--YRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLE 606

Query: 680 NQSGYKIKTLRSDRGGEYIAFGNFFKEQGIHH 703
           N+   +I T  SD GGE++A   +F + GI H
Sbjct: 607 NRFQTRIGTFYSDNGGEFVALWEYFSQHGISH 611

[Close]

BLAST of MELO.jh101908.1 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 139.8 bits (351), Expect = 1.2e-31
Identity = 139/628 (22.13%), Postives = 264/628 (42.04%), Query Frame = 0


Query: 99  FSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVELRENRKKD--KKAL 158
           F G+ +  W  +++ L   Q++  +V+                   L  N   D  KKA 
Sbjct: 11  FDGEKYAIWKFRIRALLAEQDVLKVVD------------------GLMPNEVDDSWKKAE 70

Query: 159 FFIYQAVDEFIFER-ISTATSAKAAWDILRSTYQGEDKVKMRRLQALRSEFDCIKMKETE 218
                 + E++ +  ++ ATS   A  IL +     ++  +    ALR     +K+    
Sbjct: 71  RCAKSTIIEYLSDSFLNFATSDITARQILENLDAVYERKSLASQLALRKRLLSLKLSSEM 130

Query: 219 TIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEESKDLSTLSINS 278
           ++   F+    +++ L + G ++ +   +  +L ++P  ++ I+ AIE   +   L++  
Sbjct: 131 SLLSHFHIFDELISELLAAGAKIEEMDKISHLLITLPSCYDGIITAIETLSE-ENLTLAF 190

Query: 279 LMGSLQSHELRLKQFDVNPEEVFQMQTSFRGGSRGRRGGHGRRGGGRNYDNRSGANSENS 338
           +   L   E+++K  D N      M                              ++ N+
Sbjct: 191 VKNRLLDQEIKIKN-DHNDTSKKVMNAI--------------------------VHNNNN 250

Query: 339 QESSSLSRGRGSGRGRGFGRNQGGGRGNFS-QIQCFNCGKYGHFQANCWALKNGVGNTTM 398
              ++L + R +   + F       +GN   +++C +CG+ GH + +C+  K  + N   
Sbjct: 251 TYKNNLFKNRVTKPKKIF-------KGNSKYKVKCHHCGREGHIKKDCFHYKRILNNKNK 310

Query: 399 NMHKE-QKKIDEGILFLACSVQDDVVEPT--WYLDSGCSNHMTGNRSIFVTLDESFQSEV 458
              K+ Q     GI F+   V +  V     + LDSG S+H+  + S++          V
Sbjct: 311 ENEKQVQTATSHGIAFMVKEVNNTSVMDNCGFVLDSGASDHLINDESLYT-------DSV 370

Query: 459 KTGDNTRLQVKGQGDILVKTKKGTKRVTN--------VFYVPGLKHNLLSIGQLLQRGLK 518
           +     ++ V  QG+ +  TK+G  R+ N        V +      NL+S+ +L + G+ 
Sbjct: 371 EVVPPLKIAVAKQGEFIYATKRGIVRLRNDHEITLEDVLFCKEAAGNLMSVKRLQEAGMS 430

Query: 519 VSFEGDICAIKDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLN 578
           + F+     I  + G+++ K     N +  +NF   Q    ++  K+   LWH R+GH++
Sbjct: 431 IEFDKSGVTI-SKNGLMVVKNSGMLNNVPVINF---QAYSINAKHKNNFRLWHERFGHIS 490

Query: 579 FKSLSYLCKNHMVRG---IQNINHETNICEVCILAKHHRDSFPTGK-AWRASKPLELIHT 638
              L  + + +M      + N+     ICE C+  K  R  F   K      +PL ++H+
Sbjct: 491 DGKLLEIKRKNMFSDQSLLNNLELSCEICEPCLNGKQARLPFKQLKDKTHIKRPLFVVHS 550

Query: 639 DLCGPMRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKT 698
           D+CGP+   T     YF+ F+D F+     Y +K KS+    F+ F A +E     K+  
Sbjct: 551 DVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVY 574

Query: 699 LRSDRGGEYIA--FGNFFKEQGIHHQMT 706
           L  D G EY++     F  ++GI + +T
Sbjct: 611 LYIDNGREYLSNEMRQFCVKKGISYHLT 574

[Close]

BLAST of MELO.jh101908.1 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 2.1e-28
Identity = 151/624 (24.20%), Postives = 260/624 (41.67%), Query Frame = 0


Query: 90  NMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQ---SELTNQQLVELR 149
           N+    + + +  N+  WS Q+  L+   EL   ++ G T +      ++   +   +  
Sbjct: 17  NVNMSNVTKLTSTNYLMWSRQVHALFDGYELAGFLD-GSTPMPPATIGTDAVPRVNPDYT 76

Query: 150 ENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDILRSTYQGEDKVKMRRLQALRSEF 209
             R++DK     I  A+   +   +S AT+A   W+ LR  Y       + +L       
Sbjct: 77  RWRRQDKLIYSAILGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQL------- 136

Query: 210 DCIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEESK 269
                           R +   + L   G+ +     VE++L ++P  ++ ++  I  +K
Sbjct: 137 ----------------RFITRFDQLALLGKPMDHDEQVERVLENLPDDYKPVIDQI-AAK 196

Query: 270 DL--STLSINSLMGSLQSHELRLKQFDVNPEEVFQMQTSFRGGSRGRRGGHGRRGGGRNY 329
           D   S   I+  + + +S  L L   +V P  +     + R  +  R      RG  RNY
Sbjct: 197 DTPPSLTEIHERLINRESKLLALNSAEVVP--ITANVVTHRNTNTNR--NQNNRGDNRNY 256

Query: 330 DNRSGANSENSQESSSLSRGRGSGRGRGFGRNQGGGRGNFSQIQCFNCGKYGHFQANCWA 389
           +N +   S + Q SSS SR          GR             C  C   GH    C  
Sbjct: 257 NNNNN-RSNSWQPSSSGSRSDNRQPKPYLGR-------------CQICSVQGHSAKRCPQ 316

Query: 390 LKNGVGNTTMNMHKEQKKIDEGILFLACSVQDDVVEPTWYLDSGCSNHMTGN-RSIFVTL 449
           L      +T N  +              +V        W LDSG ++H+T +  ++    
Sbjct: 317 LHQ--FQSTTNQQQSTSPFTPWQPRANLAVNSPYNANNWLLDSGATHHITSDFNNLSFHQ 376

Query: 450 DESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRG-L 509
             +   +V   D + + +   G   + T   +  +  V YVP +  NL+S+ +L     +
Sbjct: 377 PYTGGDDVMIADGSTIPITHTGSASLPTSSRSLDLNKVLYVPNIHKNLISVYRLCNTNRV 436

Query: 510 KVSFEGDICAIKD-QAGVLIAKVKMTANKMFPLNFTYGQ-ISCFSS-ILKDPSWLWHFRY 569
            V F      +KD   GV + + K T ++++       Q +S F+S   K     WH R 
Sbjct: 437 SVEFFPASFQVKDLNTGVPLLQGK-TKDELYEWPIASSQAVSMFASPCSKATHSSWHSRL 496

Query: 570 GHLNFKSLSYLCKNHMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHT 629
           GH +   L+ +  NH +  + N +H+   C  C + K H+  F +     +SKPLE I++
Sbjct: 497 GHPSLAILNSVISNHSL-PVLNPSHKLLSCSDCFINKSHKVPF-SNSTITSSKPLEYIYS 556

Query: 630 DL-CGPMRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIK 689
           D+   P+ +  N   RY++ F+D F+R  W+Y LK+KS+    F  FK+  EN+   +I 
Sbjct: 557 DVWSSPILSIDN--YRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIG 590

Query: 690 TLRSDRGGEYIAFGNFFKEQGIHH 703
           TL SD GGE++   ++  + GI H
Sbjct: 617 TLYSDNGGEFVVLRDYLSQHGISH 590

[Close]

BLAST of MELO.jh101908.1 vs. ExPASy Swiss-Prot
Match: P25601 (Putative transposon Ty5-1 protein YCL075W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5B PE=5 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 4.7e-04
Identity = 24/72 (33.33%), Postives = 40/72 (55.56%), Query Frame = 0


Query: 423 WYLDSGCSNHMTGNRSIFVTLDESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVF 482
           W  D+GC++HM  +RSIF +   S + +   G    + + G G + +    GT ++ +V 
Sbjct: 79  WIFDTGCTSHMCHDRSIFSSFTRSSRKDFVRGVGGSIPIMGSGTVNI----GTVQLHDVS 138

Query: 483 YVPGLKHNLLSI 495
           YVP L  NL+S+
Sbjct: 139 YVPDLPVNLISV 146

[Close]

BLAST of MELO.jh101908.1 vs. ExPASy TrEMBL
Match: A0A5A7V047 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G005920 PE=4 SV=1)

HSP 1 Score: 1328 bits (3438), Expect = 0.0
Identity = 672/706 (95.18%), Postives = 673/706 (95.33%), Query Frame = 0


Query: 1   MGLSRTPGRNDFPACFFQKFWDVTMEKVVPPSLEIHNRRKSVSAFNQTSIVFISKKNPLE 60
           MGLSRTPG  DFPACFFQKFWDVTMEKVVPPSLEIHNRRKS                   
Sbjct: 1   MGLSRTPGPYDFPACFFQKFWDVTMEKVVPPSLEIHNRRKS------------------- 60

Query: 61  ASDFCLLAYGLLRFQQVVSELKLDMASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQEL 120
                    GLLRFQQVVSELKLDMASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQEL
Sbjct: 61  ---------GLLRFQQVVSELKLDMASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQEL 120

Query: 121 WDIVERGYTEVENQSELTNQQLVELRENRKKDKKALFFIYQAVDEFIFERISTATSAKAA 180
           WDIVERGYTEVENQSELTNQQLVELRENRKKDKKALFFIYQAVDEFIFERISTATSAKAA
Sbjct: 121 WDIVERGYTEVENQSELTNQQLVELRENRKKDKKALFFIYQAVDEFIFERISTATSAKAA 180

Query: 181 WDILRSTYQGEDKVKMRRLQALRSEFDCIKMKETETIEEFFNRILVIVNSLRSNGEEVGD 240
           WDILRSTYQGEDKVKM RLQALRSEFDCIKMKETETIEEFFNRILVIVNSLRSNGEEVGD
Sbjct: 181 WDILRSTYQGEDKVKMIRLQALRSEFDCIKMKETETIEEFFNRILVIVNSLRSNGEEVGD 240

Query: 241 QRVVEKILRSMPRKFEHIVVAIEESKDLSTLSINSLMGSLQSHELRLKQFDVNPEEVFQM 300
           QRVVEKILRSMPRKFEHIVVAIEESKDLSTLSINSLMGSLQSHELRLKQFD NPEE FQM
Sbjct: 241 QRVVEKILRSMPRKFEHIVVAIEESKDLSTLSINSLMGSLQSHELRLKQFDDNPEEAFQM 300

Query: 301 QTSFRGGSRGRRGGHGRRGGGRNYDNRSGANSENSQESSSLSRGRGSGRGRGFGRNQGGG 360
           QTSFRGGSRGRRGGHGRRGGGRNYDNRSGANSENSQESSSLSRGRGSGRGRGFGRNQGGG
Sbjct: 301 QTSFRGGSRGRRGGHGRRGGGRNYDNRSGANSENSQESSSLSRGRGSGRGRGFGRNQGGG 360

Query: 361 RGNFSQIQCFNCGKYGHFQANCWALKNGVGNTTMNMHKEQKKIDEGILFLACSVQDDVVE 420
           RGNFSQIQCFNCGKYGHFQANCWALKNGVGNTTMNMHKEQKKIDEGILFLACSVQD+VVE
Sbjct: 361 RGNFSQIQCFNCGKYGHFQANCWALKNGVGNTTMNMHKEQKKIDEGILFLACSVQDNVVE 420

Query: 421 PTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTN 480
           PTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTN
Sbjct: 421 PTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTN 480

Query: 481 VFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAIKDQAGVLIAKVKMTANKMFPLNFTYGQ 540
           VFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAIKDQAGVLIAKVKMTANKMFPLNFTYGQ
Sbjct: 481 VFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAIKDQAGVLIAKVKMTANKMFPLNFTYGQ 540

Query: 541 ISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCILAKHHRD 600
           ISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCILAKHHRD
Sbjct: 541 ISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCILAKHHRD 600

Query: 601 SFPTGKAWRASKPLELIHTDLCGPMRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALV 660
           SFPTGKAWRASKPLELIHTDLCGPMRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALV
Sbjct: 601 SFPTGKAWRASKPLELIHTDLCGPMRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALV 660

Query: 661 CFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGNFFKEQGIHHQMTA 706
           CFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGNFFKEQGIHHQMTA
Sbjct: 661 CFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGNFFKEQGIHHQMTA 678

[Close]

BLAST of MELO.jh101908.1 vs. ExPASy TrEMBL
Match: A0A5D3CXM6 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001540 PE=4 SV=1)

HSP 1 Score: 1263 bits (3269), Expect = 0.0
Identity = 636/647 (98.30%), Postives = 640/647 (98.92%), Query Frame = 0


Query: 60   EASDFCLLAYGLLRFQQVVSELKLDMASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQE 119
            E++  CL   GLLRFQQVVSEL+LDMASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQE
Sbjct: 443  ESAARCL--QGLLRFQQVVSELRLDMASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQE 502

Query: 120  LWDIVERGYTEVENQSELTNQQLVELRENRKKDKKALFFIYQAVDEFIFERISTATSAKA 179
            LWDIVERGYTEVENQSELTNQQLVELRENRKKDKKALFFIYQAVDEFIFERISTATSAKA
Sbjct: 503  LWDIVERGYTEVENQSELTNQQLVELRENRKKDKKALFFIYQAVDEFIFERISTATSAKA 562

Query: 180  AWDILRSTYQGEDKVKMRRLQALRSEFDCIKMKETETIEEFFNRILVIVNSLRSNGEEVG 239
            AWDILRSTYQGEDKVKM RLQALRSEFDCIKMKETETIEEFFNRILVIVNSLRSNGEEVG
Sbjct: 563  AWDILRSTYQGEDKVKMIRLQALRSEFDCIKMKETETIEEFFNRILVIVNSLRSNGEEVG 622

Query: 240  DQRVVEKILRSMPRKFEHIVVAIEESKDLSTLSINSLMGSLQSHELRLKQFDVNPEEVFQ 299
            DQRVVEKILRSMPRKFEHIVVAIEESKDLSTLSINSLMGSLQSHELRLKQFDVNPEE FQ
Sbjct: 623  DQRVVEKILRSMPRKFEHIVVAIEESKDLSTLSINSLMGSLQSHELRLKQFDVNPEEAFQ 682

Query: 300  MQTSFRGGSRGRRGGHGRRGGGRNYDNRSGANSENSQESSSLSRGRGSGRGRGFGRNQGG 359
            MQTSFRGGSRGRRGGHGRRGGGRNYDNRSGANSENSQESSSLSRGRGSGRGRGFGRNQGG
Sbjct: 683  MQTSFRGGSRGRRGGHGRRGGGRNYDNRSGANSENSQESSSLSRGRGSGRGRGFGRNQGG 742

Query: 360  GRGNFSQIQCFNCGKYGHFQANCWALKNGVGNTTMNMHKEQKKIDEGILFLACSVQDDVV 419
            GRGNFSQIQCFNCGKYGHFQANCWALKNGVGNTTMNMHKEQKKIDEGILFLACSVQD+VV
Sbjct: 743  GRGNFSQIQCFNCGKYGHFQANCWALKNGVGNTTMNMHKEQKKIDEGILFLACSVQDNVV 802

Query: 420  EPTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVT 479
            EPTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVT
Sbjct: 803  EPTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVT 862

Query: 480  NVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAIKDQAGVLIAKVKMTANKMFPLNFTYG 539
            NVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAIKDQAGVLIAKVKMTANKMFPLNFTYG
Sbjct: 863  NVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAIKDQAGVLIAKVKMTANKMFPLNFTYG 922

Query: 540  QISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCILAKHHR 599
            QISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCILAKHHR
Sbjct: 923  QISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCILAKHHR 982

Query: 600  DSFPTGKAWRASKPLELIHTDLCGPMRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEAL 659
            DSFPTGKAWRASKPLELIHTDLCGPMRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEAL
Sbjct: 983  DSFPTGKAWRASKPLELIHTDLCGPMRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEAL 1042

Query: 660  VCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGNFFKEQGIHHQMTA 706
            VCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGNFFKEQGIHHQMTA
Sbjct: 1043 VCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGNFFKEQGIHHQMTA 1087

[Close]

BLAST of MELO.jh101908.1 vs. ExPASy TrEMBL
Match: A0A5A7U6S3 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold174G001490 PE=4 SV=1)

HSP 1 Score: 1247 bits (3226), Expect = 0.0
Identity = 623/629 (99.05%), Postives = 627/629 (99.68%), Query Frame = 0


Query: 78  VSELKLDMASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSEL 137
           ++EL+LDMASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSEL
Sbjct: 34  IAELRLDMASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSEL 93

Query: 138 TNQQLVELRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDILRSTYQGEDKVKMR 197
           TNQQLVELRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDILRSTYQGEDKVKM 
Sbjct: 94  TNQQLVELRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDILRSTYQGEDKVKMI 153

Query: 198 RLQALRSEFDCIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEH 257
           RLQALRSEFDCIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEH
Sbjct: 154 RLQALRSEFDCIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEH 213

Query: 258 IVVAIEESKDLSTLSINSLMGSLQSHELRLKQFDVNPEEVFQMQTSFRGGSRGRRGGHGR 317
           IVVAIEESKDLSTLSINSLMGSLQSHELRLKQFDVNPEE FQMQTSFRGGSRGRRGGHGR
Sbjct: 214 IVVAIEESKDLSTLSINSLMGSLQSHELRLKQFDVNPEEAFQMQTSFRGGSRGRRGGHGR 273

Query: 318 RGGGRNYDNRSGANSENSQESSSLSRGRGSGRGRGFGRNQGGGRGNFSQIQCFNCGKYGH 377
           RGGGRNYDNRSGANSENSQESSSLSRGRGSGRGRGFGRNQGGGRGNFSQIQCFNCGKYGH
Sbjct: 274 RGGGRNYDNRSGANSENSQESSSLSRGRGSGRGRGFGRNQGGGRGNFSQIQCFNCGKYGH 333

Query: 378 FQANCWALKNGVGNTTMNMHKEQKKIDEGILFLACSVQDDVVEPTWYLDSGCSNHMTGNR 437
           FQANCWALKNGVGNTTMNMHKEQKKIDEGILFLACSVQD+VVEPTWYLDSGCSNHMTGNR
Sbjct: 334 FQANCWALKNGVGNTTMNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNR 393

Query: 438 SIFVTLDESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQL 497
           SIFVTLDESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQL
Sbjct: 394 SIFVTLDESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQL 453

Query: 498 LQRGLKVSFEGDICAIKDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHF 557
           LQRGLKVSFEGDICAIKDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHF
Sbjct: 454 LQRGLKVSFEGDICAIKDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHF 513

Query: 558 RYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELI 617
           RYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELI
Sbjct: 514 RYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELI 573

Query: 618 HTDLCGPMRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKI 677
           HTDLCGPMRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKI
Sbjct: 574 HTDLCGPMRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKI 633

Query: 678 KTLRSDRGGEYIAFGNFFKEQGIHHQMTA 706
           KTLRSDRGGEYIAFGNFFKEQGIHHQMTA
Sbjct: 634 KTLRSDRGGEYIAFGNFFKEQGIHHQMTA 662

[Close]

BLAST of MELO.jh101908.1 vs. ExPASy TrEMBL
Match: A0A5D3CLV1 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold132G00180 PE=4 SV=1)

HSP 1 Score: 1237 bits (3200), Expect = 0.0
Identity = 619/622 (99.52%), Postives = 620/622 (99.68%), Query Frame = 0


Query: 85  MASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVE 144
           MASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVE
Sbjct: 1   MASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVE 60

Query: 145 LRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDILRSTYQGEDKVKMRRLQALRS 204
           LRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDILRSTYQGEDKVKM RLQALRS
Sbjct: 61  LRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDILRSTYQGEDKVKMIRLQALRS 120

Query: 205 EFDCIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEE 264
           EFDCIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEE
Sbjct: 121 EFDCIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEE 180

Query: 265 SKDLSTLSINSLMGSLQSHELRLKQFDVNPEEVFQMQTSFRGGSRGRRGGHGRRGGGRNY 324
           SKDLSTLSINSLMGSLQSHELRLKQFDVNPEE FQMQTSFRGGSRGRRGGHGRRGGGRNY
Sbjct: 181 SKDLSTLSINSLMGSLQSHELRLKQFDVNPEEAFQMQTSFRGGSRGRRGGHGRRGGGRNY 240

Query: 325 DNRSGANSENSQESSSLSRGRGSGRGRGFGRNQGGGRGNFSQIQCFNCGKYGHFQANCWA 384
           DNRSGANSENSQESSSLSRGRGSGRGRGFGRNQGGGRGNFSQIQCFNCGKYGHFQANCWA
Sbjct: 241 DNRSGANSENSQESSSLSRGRGSGRGRGFGRNQGGGRGNFSQIQCFNCGKYGHFQANCWA 300

Query: 385 LKNGVGNTTMNMHKEQKKIDEGILFLACSVQDDVVEPTWYLDSGCSNHMTGNRSIFVTLD 444
           LKNGVGNTTMNMHKEQKKIDEGILFLACSVQD+VVEPTWYLDSGCSNHMTGNRSIFVTLD
Sbjct: 301 LKNGVGNTTMNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLD 360

Query: 445 ESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKV 504
           ESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKV
Sbjct: 361 ESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKV 420

Query: 505 SFEGDICAIKDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNF 564
           SFEGDICAIKDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNF
Sbjct: 421 SFEGDICAIKDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNF 480

Query: 565 KSLSYLCKNHMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGP 624
           KSLSYLCKNHMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGP
Sbjct: 481 KSLSYLCKNHMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGP 540

Query: 625 MRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDR 684
           MRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDR
Sbjct: 541 MRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDR 600

Query: 685 GGEYIAFGNFFKEQGIHHQMTA 706
           GGEYIAFGNFFKEQGIHHQMTA
Sbjct: 601 GGEYIAFGNFFKEQGIHHQMTA 622

[Close]

BLAST of MELO.jh101908.1 vs. ExPASy TrEMBL
Match: A0A5D3BQ81 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G00890 PE=4 SV=1)

HSP 1 Score: 1237 bits (3200), Expect = 0.0
Identity = 619/622 (99.52%), Postives = 620/622 (99.68%), Query Frame = 0


Query: 85  MASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVE 144
           MASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVE
Sbjct: 1   MASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVE 60

Query: 145 LRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDILRSTYQGEDKVKMRRLQALRS 204
           LRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDILRSTYQGEDKVKM RLQALRS
Sbjct: 61  LRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDILRSTYQGEDKVKMIRLQALRS 120

Query: 205 EFDCIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEE 264
           EFDCIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEE
Sbjct: 121 EFDCIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEE 180

Query: 265 SKDLSTLSINSLMGSLQSHELRLKQFDVNPEEVFQMQTSFRGGSRGRRGGHGRRGGGRNY 324
           SKDLSTLSINSLMGSLQSHELRLKQFDVNPEE FQMQTSFRGGSRGRRGGHGRRGGGRNY
Sbjct: 181 SKDLSTLSINSLMGSLQSHELRLKQFDVNPEEAFQMQTSFRGGSRGRRGGHGRRGGGRNY 240

Query: 325 DNRSGANSENSQESSSLSRGRGSGRGRGFGRNQGGGRGNFSQIQCFNCGKYGHFQANCWA 384
           DNRSGANSENSQESSSLSRGRGSGRGRGFGRNQGGGRGNFSQIQCFNCGKYGHFQANCWA
Sbjct: 241 DNRSGANSENSQESSSLSRGRGSGRGRGFGRNQGGGRGNFSQIQCFNCGKYGHFQANCWA 300

Query: 385 LKNGVGNTTMNMHKEQKKIDEGILFLACSVQDDVVEPTWYLDSGCSNHMTGNRSIFVTLD 444
           LKNGVGNTTMNMHKEQKKIDEGILFLACSVQD+VVEPTWYLDSGCSNHMTGNRSIFVTLD
Sbjct: 301 LKNGVGNTTMNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLD 360

Query: 445 ESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKV 504
           ESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKV
Sbjct: 361 ESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKV 420

Query: 505 SFEGDICAIKDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNF 564
           SFEGDICAIKDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNF
Sbjct: 421 SFEGDICAIKDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNF 480

Query: 565 KSLSYLCKNHMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGP 624
           KSLSYLCKNHMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGP
Sbjct: 481 KSLSYLCKNHMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGP 540

Query: 625 MRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDR 684
           MRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDR
Sbjct: 541 MRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDR 600

Query: 685 GGEYIAFGNFFKEQGIHHQMTA 706
           GGEYIAFGNFFKEQGIHHQMTA
Sbjct: 601 GGEYIAFGNFFKEQGIHHQMTA 622

[Close]

BLAST of MELO.jh101908.1 vs. TAIR 10
Match: AT3G21000.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 87.4 bits (215), Expect = 4.9e-17
Identity = 96/421 (22.80%), Postives = 176/421 (41.81%), Query Frame = 0


Query: 103 NFNQWSIQMKVLYGSQELWDIVERGYTE-----VENQSELTNQQLVELRENRKKDKKALF 162
           ++  W+   K     Q LWD+V  G  +      E  + +  ++L + R+   KD KAL 
Sbjct: 16  DYEIWAPITKSTLIEQGLWDVVVNGVPQDPSKNPELAATIQPEELSKWRDFVVKDAKALQ 75

Query: 163 FIYQAVDEFIFERISTATSAKAAWDILRSTYQGEDKVKMRRLQ-----ALRSEFDCIKMK 222
            +  ++ + +F +  +A+SAK  WD+LR   +G ++  +RRL+      L  + + +KM 
Sbjct: 76  ILQSSLTDSVFRKTLSASSAKDVWDLLR---KGNEQATIRRLEQVTIRRLEKQLEDLKMV 135

Query: 223 ETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEESKDLSTLS 282
           + E+   + ++ L I+  L     E  D  + + +  ++   F+ +   +EE  D+  ++
Sbjct: 136 DKESGSSYLDKALEILERLGRAKLEKSDYEICKNVFTTLSGSFDGLDSMLEELIDVHKMT 195

Query: 283 INSLMGSLQSHELRLKQFDVNPEEVFQMQTSFRGGSRGRRGGHGRRGGGRNYDNRSGANS 342
             SL+                  E F  +                               
Sbjct: 196 SKSLV------------------EYFYYRV-----------------------------H 255

Query: 343 ENSQESSSLSRGRGSGRGRGFGRNQGGGRGNFSQIQCFNCGKYGHFQANCWALKNGVGNT 402
           E+S E +             FG  +     + S+  C  C K  H Q +C          
Sbjct: 256 ESSTEEAI------------FGLLKDLRLKSKSEKWCGLCYKNNHNQEDC--------KF 315

Query: 403 TMNMHKEQKKID-------EGILFLACSVQDDVVEPTWYLDSGCSNHMTGNRSIFVTLDE 462
            ++  KE+K+ +       E +  L     DD +   W +      +MT     F TLD 
Sbjct: 316 RIHTDKEEKEDEIVVDYRLETVPNLGAKTYDDDI---WIIHKMAPINMTPYVKYFTTLDR 363

Query: 463 SFQSEVKTGDNTRLQVKGQGDILVKTKKGTKR-VTNVFYVPGLKHNLLSIGQLLQRGLKV 506
           +F++ V T D T L V+G+GD+ ++ K+G K+ + NV +VPGL  N+LS G+++ +   +
Sbjct: 376 TFKATVGTVDGTVLLVEGKGDVKIRMKEGKKKTIRNVIFVPGLNRNVLSFGKMVSKRYSI 363

[Close]

BLAST of MELO.jh101908.1 vs. TAIR 10
Match: AT1G48720.1 (unknown protein; Has 229 Blast hits to 229 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 228; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 86.3 bits (212), Expect = 1.1e-16
Identity = 43/94 (45.74%), Postives = 65/94 (69.15%), Query Frame = 0


Query: 85  MASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVE 144
           MASN   +  Q+P  +  N++ WS++MK + G+ ++W+IVE+G+ E EN+  L+  Q   
Sbjct: 1   MASNN--VPFQVPVLTKSNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDG 60

Query: 145 LRENRKKDKKALFFIYQAVDEFIFERISTATSAK 179
           LR++RK+DKKAL  IYQ +DE  FE++  ATSAK
Sbjct: 61  LRDSRKRDKKALCLIYQGLDEDTFEKVVEATSAK 92

[Close]

BLAST of MELO.jh101908.1 vs. TAIR 10
Match: AT3G20980.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 72.8 bits (177), Expect = 1.3e-12
Identity = 48/132 (36.36%), Postives = 67/132 (50.76%), Query Frame = 0


Query: 420 EPTWYLDSGCSNHMTGNRSIFVTLDESFQSEVK--TGD---NTRLQVKGQGDILVKTKKG 479
           E  W + S  SNHMT +   F TLD S + +VK  +GD    T   V+G GD+   T +G
Sbjct: 266 ENIWLISSTNSNHMTPHVKFFTTLDRSRKCKVKFISGDKSETTVAMVEGIGDVTFITNEG 325

Query: 480 TKRVTNVFYVPGLKHNLLSIGQLLQRGLKVSFEGDI-CAIKDQAGVLIAKVKMTANKMFP 539
            K + NV YVPG++ N LS+ QL + G +VS E    C + D+    +    M   + F 
Sbjct: 326 NKTIKNVLYVPGIEGNALSVSQLKRNGFEVSMERRTGCFVWDRTTGKMFGKNMWEKRGFC 385

Query: 540 LNFTY--GQISC 544
           L F+   G   C
Sbjct: 386 LRFSVIEGNFQC 397

The following BLAST results are available for this feature:

BLAST of MELO.jh101908.1 vs. NCBI nr


Match Name	Identity	Description
KAA0060690.1	95.18	integrase [Cucumis melo var. makuwa]	[more]
TYK16225.1	98.30	integrase [Cucumis melo var. makuwa]	[more]
KAA0051603.1	99.05	integrase [Cucumis melo var. makuwa]	[more]
TYJ95504.1	99.52	integrase [Cucumis melo var. makuwa] >TYK08522.1 integrase [Cucumis melo var. ma...	[more]
KAA0039947.1	99.52	integrase [Cucumis melo var. makuwa]	[more]

BLAST of MELO.jh101908.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	1.1e-45	25.92	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
Q94HW2	4.3e-34	23.26	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P04146	1.2e-31	22.13	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q9ZT94	2.1e-28	24.20	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P25601	4.7e-04	33.33	Putative transposon Ty5-1 protein YCL075W OS=Saccharomyces cerevisiae (strain AT...	[more]

BLAST of MELO.jh101908.1 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A5A7V047	95.18	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G005920 PE=4...	[more]
A0A5D3CXM6	98.30	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001540 PE=...	[more]
A0A5A7U6S3	99.05	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold174G001490 PE=...	[more]
A0A5D3CLV1	99.52	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold132G00180 PE=4...	[more]
A0A5D3BQ81	99.52	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G00890 PE=4...	[more]

BLAST of MELO.jh101908.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G21000.1	4.9e-17	22.80	Gag-Pol-related retrotransposon family protein	[more]
AT1G48720.1	1.1e-16	45.74	unknown protein; Has 229 Blast hits to 229 proteins in 10 species: Archae - 0; B...	[more]
AT3G20980.1	1.3e-12	36.36	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 128..148
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 149..289 e-value: 2.2E-27 score: 95.5
None	No IPR available	GENE3D	4.10.60.10		coord: 335..394 e-value: 9.7E-6 score: 27.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 301..359
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 325..345
None	No IPR available	PANTHER	PTHR34222	FAMILY NOT NAMED	coord: 110..464
None	No IPR available	PANTHER	PTHR34222:SF30	SUBFAMILY NOT NAMED	coord: 110..464
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 368..384 e-value: 0.0028 score: 26.9
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 369..382 score: 9.866995
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 611..705 e-value: 9.3E-15 score: 54.8
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 609..706 score: 15.565201
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 606..706 e-value: 6.3E-21 score: 76.6
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 542..597 e-value: 7.4E-14 score: 51.4
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 354..392
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 607..705

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO.jh101908.1.t1	MELO.jh101908.1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding