MELO.jh101893.1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh101893.1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Ty3/gypsy retrotransposon protein
Location	chr06: 25342833 .. 25344570 (+)
RNA-Seq Expression	MELO.jh101893.1
Synteny	MELO.jh101893.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGAGCATATATATCATTTAGAACTGGTGTTTGAAGTTTTACGTGAGCACAAGCTATATGCTAACAAAAAGAAATGTATTTTTGCTTTTCAGAAGGTGGAGTATCTTGGCCACATTGTTTCAGGTCAAGGTCTAGAAGTTGATCCAGAAAAAATCAGATCAATTAAACAGTGGCCAGTACCAACAAACATGAGGGAGTTGCGGGGATTTCTAGGACTTACTGGATACTGCAAGAGATTTGTGCAGAGCTCTATTGTGGCTTCTCTAACTCGGCTATTGAAATTGGGAGCTTTTAAATGGAATGAGGAAGCCCAGTTGGCATTTGACAAATTAAAGGAAGCTATGATGACCTTGCCAGTGTTGGCGTTACCAGACTTTAATTTGCCCTTTGAAGTGGAGACAGATGCATCAGGATATGGTGTAGGAGCGGTTTTAATACAGAACAAGAGACCAATTGCATTTTTCAGCCATAATTTAGCTTTAAGGGATCGTGCCAAGCCTGTATATGAGAGGGAACTTATGGCTGTAGTCTTGGTTGTTCAGCGTTGGCGACGACCATATTTGTTAGGAAGAAGATTTGTGGTGAAGACTGGCCAGAGATCCCTTAAATTTTTACTTGAACAACGGGTAATTCAACCGCAGTACCAGAAATGGTTTGCAAAATTGTTAGGATATTTCTTTGAGGTGATTTACAATTCCGGATTGGAAAACAAAGCAGTTGATGCTTTGTCCAGAGTGACTTCTATGGTGCATCTAAATCAATTGACAGCTCCAGCATTGATTGATTTAAAGGTCATCAAGGAAGAAGTGGAAAATGATGATCATCTTAAGGATATTATAAGAAGAATCAAAGGGGGAGAAGAGGTACAAAAGTATACATTACAGCAAGATATGCTACAGTATAAAGGGAGGTTGGTCATTGCAAAGAACTCAACTTTGATTCCAACTATCCTTTATACCTACCACGACTCTGTTTTTTGTGGTCATTTGGGTTACCTTCGAACATATAAAAGACTAACAGGAGAATTATTTTGGCAAGGAATGAAGGGAGATGTATAGAAACACTATGAAGAATGTGCAGTGTGTCAACGGAATAAGTCCATGTCTTTGTCACTAGCGGGCTTATTGACACCGTTACAGATTACAAGCAGAGTTTGGGATGACATCTCAATGGATTTCATTGAAGGATTACCCAAAGCAGCCAGATTTGAAGTAATTTTGGTAGTGGTGGATCGGTTTAGTAAGTATGGTCATTTTCTTACATTGAAACACCCTTTTGATGCCAAAATTGTGGCAGAATTGTTTGTCAAAAGGTGGGTAGACTGCATGGTTTCCCACAGTCAATTGTGCCTGATAGAGAGAATTTTCTTAAGCCATTTCGAAGGAGTTATTTCGTTTGGCTGGAATGAAATTAAACAGGAGCACAACTTATCATCCTCAAACAAATGGGCAAACAGAGGTGGTTAATCGTTCGGTAGAAGCTTATTTGCGATGTTTTTGTGGGGAGAGGTCAAAAGAATGGATCAAATGGATTCATTGGGCGGAATACTGGTATAACACAACATACCAGCAATCACTTGGAGTATCCCCTTTTCAGGTTGTGTATGGCAGAACCCCTCCACCATTGGTGTTTTATGGAGATCACAACAAAATTAACTCTACACTTGATGATCAACTAAAGCAAAGAGATATAGCTTTGGGAGCGCTGAAGGAACACTTGAGGAAGGTGATATGA

mRNA sequence

ATGGATGAGCATATATATCATTTAGAACTGGTGTTTGAAGTTTTACGTGAGCACAAGCTATATGCTAACAAAAAGAAATGTATTTTTGCTTTTCAGAAGGTGGAGTATCTTGGCCACATTGTTTCAGGTCAAGGTCTAGAAGTTGATCCAGAAAAAATCAGATCAATTAAACAGTGGCCAGTACCAACAAACATGAGGGAGTTGCGGGGATTTCTAGGACTTACTGGATACTGCAAGAGATTTGTGCAGAGCTCTATTGTGGCTTCTCTAACTCGGCTATTGAAATTGGGAGCTTTTAAATGGAATGAGGAAGCCCAGTTGGCATTTGACAAATTAAAGGAAGCTATGATGACCTTGCCAGTGTTGGCGTTACCAGACTTTAATTTGCCCTTTGAAGTGGAGACAGATGCATCAGGATATGGTGTAGGAGCGGTTTTAATACAGAACAAGAGACCAATTGCATTTTTCAGCCATAATTTAGCTTTAAGGGATCGTGCCAAGCCTGTATATGAGAGGGAACTTATGGCTGTAGTCTTGGTTGTTCAGCGTTGGCGACGACCATATTTGTTAGGAAGAAGATTTGTGGTGAAGACTGGCCAGAGATCCCTTAAATTTTTACTTGAACAACGGGTAATTCAACCGCAGTACCAGAAATGGTTTGCAAAATTGTTAGGATATTTCTTTGAGGTGATTTACAATTCCGGATTGGAAAACAAAGCAGTTGATGCTTTGTCCAGAGTGACTTCTATGGTGCATCTAAATCAATTGACAGCTCCAGCATTGATTGATTTAAAGGTCATCAAGGAAGAAGTGGAAAATGATGATCATCTTAAGGATATTATAAGAAGAATCAAAGGGGGAGAAGAGATTACAAGCAGAGTTTGGGATGACATCTCAATGGATTTCATTGAAGGATTACCCAAAGCAGCCAGATTTGAAGTAATTTTGGTAGTGGTGGATCGGTTTAGTAAGTATGGTCATTTTCTTACATTGAAACACCCTTTTGATGCCAAAATTGTGGCAGAATTGTTTGTCAAAAGGAGCACAACTTATCATCCTCAAACAAATGGGCAAACAGAGGTGGTTAATCGTTCGGTAGAAGCTTATTTGCGATGTTTTTGTGGGGAGAGGTCAAAAGAATGGATCAAATGGATTCATTGGGCGGAATACTGGTATAACACAACATACCAGCAATCACTTGGAGTATCCCCTTTTCAGGTTGTGTATGGCAGAACCCCTCCACCATTGGTGTTTTATGGAGATCACAACAAAATTAACTCTACACTTGATGATCAACTAAAGCAAAGAGATATAGCTTTGGGAGCGCTGAAGGAACACTTGAGGAAGGTGATATGA

Coding sequence (CDS)

ATGGATGAGCATATATATCATTTAGAACTGGTGTTTGAAGTTTTACGTGAGCACAAGCTATATGCTAACAAAAAGAAATGTATTTTTGCTTTTCAGAAGGTGGAGTATCTTGGCCACATTGTTTCAGGTCAAGGTCTAGAAGTTGATCCAGAAAAAATCAGATCAATTAAACAGTGGCCAGTACCAACAAACATGAGGGAGTTGCGGGGATTTCTAGGACTTACTGGATACTGCAAGAGATTTGTGCAGAGCTCTATTGTGGCTTCTCTAACTCGGCTATTGAAATTGGGAGCTTTTAAATGGAATGAGGAAGCCCAGTTGGCATTTGACAAATTAAAGGAAGCTATGATGACCTTGCCAGTGTTGGCGTTACCAGACTTTAATTTGCCCTTTGAAGTGGAGACAGATGCATCAGGATATGGTGTAGGAGCGGTTTTAATACAGAACAAGAGACCAATTGCATTTTTCAGCCATAATTTAGCTTTAAGGGATCGTGCCAAGCCTGTATATGAGAGGGAACTTATGGCTGTAGTCTTGGTTGTTCAGCGTTGGCGACGACCATATTTGTTAGGAAGAAGATTTGTGGTGAAGACTGGCCAGAGATCCCTTAAATTTTTACTTGAACAACGGGTAATTCAACCGCAGTACCAGAAATGGTTTGCAAAATTGTTAGGATATTTCTTTGAGGTGATTTACAATTCCGGATTGGAAAACAAAGCAGTTGATGCTTTGTCCAGAGTGACTTCTATGGTGCATCTAAATCAATTGACAGCTCCAGCATTGATTGATTTAAAGGTCATCAAGGAAGAAGTGGAAAATGATGATCATCTTAAGGATATTATAAGAAGAATCAAAGGGGGAGAAGAGATTACAAGCAGAGTTTGGGATGACATCTCAATGGATTTCATTGAAGGATTACCCAAAGCAGCCAGATTTGAAGTAATTTTGGTAGTGGTGGATCGGTTTAGTAAGTATGGTCATTTTCTTACATTGAAACACCCTTTTGATGCCAAAATTGTGGCAGAATTGTTTGTCAAAAGGAGCACAACTTATCATCCTCAAACAAATGGGCAAACAGAGGTGGTTAATCGTTCGGTAGAAGCTTATTTGCGATGTTTTTGTGGGGAGAGGTCAAAAGAATGGATCAAATGGATTCATTGGGCGGAATACTGGTATAACACAACATACCAGCAATCACTTGGAGTATCCCCTTTTCAGGTTGTGTATGGCAGAACCCCTCCACCATTGGTGTTTTATGGAGATCACAACAAAATTAACTCTACACTTGATGATCAACTAAAGCAAAGAGATATAGCTTTGGGAGCGCTGAAGGAACACTTGAGGAAGGTGATATGA

Protein sequence

MDEHIYHLELVFEVLREHKLYANKKKCIFAFQKVEYLGHIVSGQGLEVDPEKIRSIKQWPVPTNMRELRGFLGLTGYCKRFVQSSIVASLTRLLKLGAFKWNEEAQLAFDKLKEAMMTLPVLALPDFNLPFEVETDASGYGVGAVLIQNKRPIAFFSHNLALRDRAKPVYERELMAVVLVVQRWRRPYLLGRRFVVKTGQRSLKFLLEQRVIQPQYQKWFAKLLGYFFEVIYNSGLENKAVDALSRVTSMVHLNQLTAPALIDLKVIKEEVENDDHLKDIIRRIKGGEEITSRVWDDISMDFIEGLPKAARFEVILVVVDRFSKYGHFLTLKHPFDAKIVAELFVKRSTTYHPQTNGQTEVVNRSVEAYLRCFCGERSKEWIKWIHWAEYWYNTTYQQSLGVSPFQVVYGRTPPPLVFYGDHNKINSTLDDQLKQRDIALGALKEHLRKVI

Homology

[Close]

BLAST of MELO.jh101893.1 vs. NCBI nr
Match: KAA0059954.1 (retrotransposon polyprotein [Cucumis melo var. makuwa] >TYK07597.1 retrotransposon polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 690 bits (1780), Expect = 2.79e-243
Identity = 355/474 (74.89%), Postives = 381/474 (80.38%), Query Frame = 0


Query: 1   MDEHIYHLELVFEVLREHKLYANKKKCIFAFQKVEYLGHIVSGQGLEVDPEKIRSIKQWP 60
           M+EHIYHLELVFEVLREHKLYANKKKC FAFQ+VEYLGHIVS QG+E DPEKI+SIKQWP
Sbjct: 113 MEEHIYHLELVFEVLREHKLYANKKKCSFAFQRVEYLGHIVSDQGVEADPEKIKSIKQWP 172

Query: 61  VPTNMRELRGFLGLTGYCKRFVQSSIVASLTRLLKLGAFKWNEEAQLAFDKLKEAMMTLP 120
           VP+N                            LLKLGAF+W +++Q  FD+LKEAMMTLP
Sbjct: 173 VPSN----------------------------LLKLGAFRWTKDSQTTFDRLKEAMMTLP 232

Query: 121 VLALPDFNLPFEVETDASGYGVGAVLIQNKRPIAFFSHNLALRDRAKPVYERELMAVVLV 180
           VLALPDF+LPFE+ETDASGYGVGAVL+QNKRPIAFFSH LALRDRAKPVYERELM VVL 
Sbjct: 233 VLALPDFSLPFEMETDASGYGVGAVLMQNKRPIAFFSHTLALRDRAKPVYERELMVVVLA 292

Query: 181 VQRWRRPYLLGRRFVVKTGQRSLKFLLEQRVIQPQYQKWFAKLLGYFFEVIYNSGLENKA 240
           VQRW RPYLLGRRFVVKT QRSLKFLLEQ+VIQPQ QKW AKLLGY FEV+Y   LENKA
Sbjct: 293 VQRW-RPYLLGRRFVVKTDQRSLKFLLEQQVIQPQDQKWIAKLLGYSFEVLYKPELENKA 352

Query: 241 VDALSRVTSMVHLNQLTAPALIDLKVIKEEVENDDHLKDIIRRIKGGEE----------- 300
            DALSRV SMV LNQLT P LIDLK+I++EVE DD+LK II+RI  GEE           
Sbjct: 353 ADALSRVPSMVQLNQLTVPVLIDLKLIQKEVEKDDYLKQIIKRITEGEEVPKYTIHHGLL 412

Query: 301 ----ITSRVWDDISMDFIEGLPKAARFEVILVVVDRFSKYGHFLTLKHPFDAKIVAELFV 360
               I SR+WDDISMDFIEGLPKAA FEVILVVVDRFSKYGHFLTLKHPFDAK VAE  +
Sbjct: 413 TPLEIPSRIWDDISMDFIEGLPKAAGFEVILVVVDRFSKYGHFLTLKHPFDAKTVAEPLL 472

Query: 361 K-----------RSTTYHPQTNGQTEVVNRSVEAYLRCFCGERSKEWIKWIHWAEYWYNT 420
           +           RST YHPQT+GQTEVVNRSVEAYLRCFCGER KEWIKWIHW EYWYNT
Sbjct: 473 EGTIRLDGTKLNRSTAYHPQTDGQTEVVNRSVEAYLRCFCGERPKEWIKWIHWVEYWYNT 532

Query: 421 TYQQSLGVSPFQVVYGRTPPPLVFYGDHNKINSTLDDQLKQRDIALGALKEHLR 448
           TYQ+SLGVS FQ VYG TPPPLVFYGDH+  NSTLDDQLKQRDIALGALKEHLR
Sbjct: 533 TYQRSLGVSLFQAVYGSTPPPLVFYGDHSTTNSTLDDQLKQRDIALGALKEHLR 557

[Close]

BLAST of MELO.jh101893.1 vs. NCBI nr
Match: KAA0037388.1 (transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 701 bits (1808), Expect = 2.53e-235
Identity = 355/461 (77.01%), Postives = 385/461 (83.51%), Query Frame = 0


Query: 1    MDEHIYHLELVFEVLREHKLYANKKKCIFAFQKVEYLGHIVSGQGLEVDPEKIRSIKQWP 60
            M+EHIYHLELVFEVLREHKLYANKKKC FAFQ+VEYLGHIVSGQG+EVDPEKI+SIKQWP
Sbjct: 1067 MEEHIYHLELVFEVLREHKLYANKKKCSFAFQRVEYLGHIVSGQGVEVDPEKIKSIKQWP 1126

Query: 61   VPTNMRELRGFLGLTGYCKRFVQSSIVASLTRLLKLGAFKWNEEAQLAFDKLKEAMMTLP 120
                            Y       SI A LT+LLKLGAF+W E++Q  FD+LKEAMMTLP
Sbjct: 1127 ---------------NY------GSIAAPLTQLLKLGAFRWTEDSQTTFDRLKEAMMTLP 1186

Query: 121  VLALPDFNLPFEVETDASGYGVGAVLIQNKRPIAFFSHNLALRDRAKPVYERELMAVVLV 180
            VLALPDF+LPFE+ETDASGYGVGAVL+QNKRPIAFFSH LALRDRAKPVYER+LMAVVL 
Sbjct: 1187 VLALPDFSLPFEMETDASGYGVGAVLMQNKRPIAFFSHTLALRDRAKPVYERQLMAVVLA 1246

Query: 181  VQRWRRPYLLGRRFVVKTGQRSLKFLLEQRVIQPQYQKWFAKLLGYFFEVIYNSGLENKA 240
            VQRW RPYLLGRRFVVKT QRSLKFLLEQRVIQPQYQKW AKLLGY FE++Y  GLENKA
Sbjct: 1247 VQRW-RPYLLGRRFVVKTDQRSLKFLLEQRVIQPQYQKWIAKLLGYSFEILYKPGLENKA 1306

Query: 241  VDALSRVTSMVHLNQLTAPALIDLKVIKEEVENDDHLKDIIRRIKGGEEITSRVWDDISM 300
             DAL +V S+V LNQL  PALIDLK+I+EEV+ DD+LK II+RI  G     R+WDDISM
Sbjct: 1307 ADALFQVPSVVQLNQLIVPALIDLKLIREEVDKDDYLKQIIKRITEG----GRIWDDISM 1366

Query: 301  DFIEGLPKAARFEVILVVVDRFSKYGHFLTLKHPFDAKIVAELFVK-------------R 360
            DFIEGLPKAA F+VILVVVDRFSKYGHFLTLKHPFDAK VAE+FVK             R
Sbjct: 1367 DFIEGLPKAAGFDVILVVVDRFSKYGHFLTLKHPFDAKTVAEVFVKEVELFRLAGTKLNR 1426

Query: 361  STTYHPQTNGQTEVVNRSVEAYLRCFCGERSKEWIKWIHWAEYWYNTTYQQSLGVSPFQV 420
             T YHPQT+GQTEV NRSVEAYLRCFCGER KEWIKWIHWAEYWYNTTYQ+SLG SPFQ 
Sbjct: 1427 RTVYHPQTDGQTEVANRSVEAYLRCFCGERPKEWIKWIHWAEYWYNTTYQRSLGASPFQA 1486

Query: 421  VYGRTPPPLVFYGDHNKINSTLDDQLKQRDIALGALKEHLR 448
            VYGRTPPPLV YGDH+  NSTL++QLKQRDIALGALKEHLR
Sbjct: 1487 VYGRTPPPLVSYGDHSTTNSTLNEQLKQRDIALGALKEHLR 1501

[Close]

BLAST of MELO.jh101893.1 vs. NCBI nr
Match: TYJ97524.1 (transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 701 bits (1808), Expect = 2.53e-235
Identity = 355/461 (77.01%), Postives = 385/461 (83.51%), Query Frame = 0


Query: 1    MDEHIYHLELVFEVLREHKLYANKKKCIFAFQKVEYLGHIVSGQGLEVDPEKIRSIKQWP 60
            M+EHIYHLELVFEVLREHKLYANKKKC FAFQ+VEYLGHIVSGQG+EVDPEKI+SIKQWP
Sbjct: 1067 MEEHIYHLELVFEVLREHKLYANKKKCSFAFQRVEYLGHIVSGQGVEVDPEKIKSIKQWP 1126

Query: 61   VPTNMRELRGFLGLTGYCKRFVQSSIVASLTRLLKLGAFKWNEEAQLAFDKLKEAMMTLP 120
                            Y       SI A LT+LLKLGAF+W E++Q  FD+LKEAMMTLP
Sbjct: 1127 ---------------NY------GSIAAPLTQLLKLGAFRWTEDSQTTFDRLKEAMMTLP 1186

Query: 121  VLALPDFNLPFEVETDASGYGVGAVLIQNKRPIAFFSHNLALRDRAKPVYERELMAVVLV 180
            VLALPDF+LPFE+ETDASGYGVGAVL+QNKRPIAFFSH LALRDRAKPVYER+LMAVVL 
Sbjct: 1187 VLALPDFSLPFEMETDASGYGVGAVLMQNKRPIAFFSHTLALRDRAKPVYERQLMAVVLA 1246

Query: 181  VQRWRRPYLLGRRFVVKTGQRSLKFLLEQRVIQPQYQKWFAKLLGYFFEVIYNSGLENKA 240
            VQRW RPYLLGRRFVVKT QRSLKFLLEQRVIQPQYQKW AKLLGY FE++Y  GLENKA
Sbjct: 1247 VQRW-RPYLLGRRFVVKTDQRSLKFLLEQRVIQPQYQKWIAKLLGYSFEILYKPGLENKA 1306

Query: 241  VDALSRVTSMVHLNQLTAPALIDLKVIKEEVENDDHLKDIIRRIKGGEEITSRVWDDISM 300
             DAL +V S+V LNQL  PALIDLK+I+EEV+ DD+LK II+RI  G     R+WDDISM
Sbjct: 1307 ADALFQVPSVVQLNQLIVPALIDLKLIREEVDKDDYLKQIIKRITEG----GRIWDDISM 1366

Query: 301  DFIEGLPKAARFEVILVVVDRFSKYGHFLTLKHPFDAKIVAELFVK-------------R 360
            DFIEGLPKAA F+VILVVVDRFSKYGHFLTLKHPFDAK VAE+FVK             R
Sbjct: 1367 DFIEGLPKAAGFDVILVVVDRFSKYGHFLTLKHPFDAKTVAEVFVKEVELFRLAGTKLNR 1426

Query: 361  STTYHPQTNGQTEVVNRSVEAYLRCFCGERSKEWIKWIHWAEYWYNTTYQQSLGVSPFQV 420
             T YHPQT+GQTEV NRSVEAYLRCFCGER KEWIKWIHWAEYWYNTTYQ+SLG SPFQ 
Sbjct: 1427 RTAYHPQTDGQTEVANRSVEAYLRCFCGERPKEWIKWIHWAEYWYNTTYQRSLGASPFQA 1486

Query: 421  VYGRTPPPLVFYGDHNKINSTLDDQLKQRDIALGALKEHLR 448
            VYGRTPPPLV YGDH+  NSTL++QLKQRDIALGALKEHLR
Sbjct: 1487 VYGRTPPPLVSYGDHSTTNSTLNEQLKQRDIALGALKEHLR 1501

[Close]

BLAST of MELO.jh101893.1 vs. NCBI nr
Match: TYK15157.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 596 bits (1536), Expect = 1.89e-201
Identity = 315/580 (54.31%), Postives = 381/580 (65.69%), Query Frame = 0


Query: 1   MDEHIYHLELVFEVLREHKLYANKKKCIFAFQKVEYLGHIVSGQGLEVDPEKIRSIKQWP 60
           M+EH  HLE+V E+LRE +LYAN  KC FA  ++ YLGH +S +G+EVDPEKIR++K+WP
Sbjct: 336 MEEHGQHLEVVLEILRESELYANFDKCHFAKTRISYLGHYISKKGIEVDPEKIRAVKEWP 395

Query: 61  VPTNMRELRGFLGLTGYCKRFVQS--SIVASLTRLLKLGAFKWNEEAQLAFDKLKEAMMT 120
            P+N+RELRGFLGLTGY +RFVQ+  SI A LT+LLK GA+KW EE + AF+KLK+AMMT
Sbjct: 396 APSNVRELRGFLGLTGYYRRFVQNYGSISAPLTQLLKSGAYKWTEETEAAFEKLKKAMMT 455

Query: 121 LPVLALPDFNLPFEVETDASGYGVGAVLIQNKRPIAFFSHNLALRDRAKPVYERELMAVV 180
           LPVLA+PDFNLPFE+E+DASG+GVGAVL+Q+KRP+A+FS  L+ RDRA+PVYEREL+AVV
Sbjct: 456 LPVLAMPDFNLPFEIESDASGFGVGAVLVQDKRPVAYFSKVLSTRDRARPVYERELIAVV 515

Query: 181 LVVQRWRRPYLLGRRFVVKTGQRSLKFLLEQRVIQPQYQKWFAKLLGYFFEVIYNSGLEN 240
             VQRW RPYLLGR+F VKT QRSLKFLLEQRVIQPQYQ+W AKLLGY FEV+Y  GL+N
Sbjct: 516 WAVQRW-RPYLLGRKFTVKTDQRSLKFLLEQRVIQPQYQQWIAKLLGYSFEVLYKPGLKN 575

Query: 241 KAVDALSRVTSMVHLNQLTAPALIDLKVIKEEVENDDHLKDIIRRIK------------- 300
           KA DALSR+    HLNQLTAPAL+D++VI++EV+ D  L++II  I+             
Sbjct: 576 KAADALSRLGPTAHLNQLTAPALLDVEVIQKEVKKDPALREIISMIEEQGIAIPHYTCHQ 635

Query: 301 ------------------------------GGE--------------------------- 360
                                         GG                            
Sbjct: 636 GILKFKGRLVLSKASTLIPTIMHTYHDSVFGGHSGFLRTYKRMAGELYWKGMKKDVQKYC 695

Query: 361 -----------------------EITSRVWDDISMDFIEGLPKAARFEVILVVVDRFSKY 420
                                  EI   +W DISMDFIEGLPK+  +EVILVVVDR SKY
Sbjct: 696 DECMICQKNKSSALSPAGLLLPLEIPDAIWSDISMDFIEGLPKSYGWEVILVVVDRLSKY 755

Query: 421 GHFLTLKHPFDAKIVAELFVK-------------------------------------RS 448
            HFLTLKHP+ AK VAE+FVK                                     RS
Sbjct: 756 AHFLTLKHPYTAKTVAEVFVKEVVRLHGFPKSIVSDRDKIFLSHFWSEMFRLAGTKLNRS 815

[Close]

BLAST of MELO.jh101893.1 vs. NCBI nr
Match: KAA0032862.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 595 bits (1534), Expect = 2.39e-201
Identity = 300/495 (60.61%), Postives = 369/495 (74.55%), Query Frame = 0


Query: 1   MDEHIYHLELVFEVLREHKLYANKKKCIFAFQKVEYLGHIVSGQGL-EVDPEKIRSIKQW 60
           M+EH+ HLE+V  +L+E +LYAN +KC FA  ++ YLGH +S QG+ +VDPEKIR++ +W
Sbjct: 308 MEEHVQHLEVVLGLLKEKELYANLEKCSFAKPRIGYLGHFISKQGIIKVDPEKIRAVSEW 367

Query: 61  PVPTNMRELRGFLGLTGYCKRFVQS--SIVASLTRLLKLGAFKWNEEAQLAFDKLKEAMM 120
           P  TN++E+RGFLGLTGY +RFV+   ++ A LT+LLK G++KWN EA+ AFDKLK AMM
Sbjct: 368 PTSTNVQEVRGFLGLTGYYRRFVKDYGTLAAPLTQLLKTGSYKWNGEAEAAFDKLKRAMM 427

Query: 121 TLPVLALPDFNLPFEVETDASGYGVGAVLIQNKRPIAFFSHNLALRDRAKPVYERELMAV 180
           TLPVLA+PDFNLPFE+E+DASG+GVGAVL Q ++PIA+FS  L +RDRA+ VYEREL+AV
Sbjct: 428 TLPVLAMPDFNLPFEIESDASGFGVGAVLTQCRKPIAYFSKTLCMRDRARLVYERELIAV 487

Query: 181 VLVVQRWRRPYLLGRRFVVKTGQRSLKFLLEQRVIQPQYQKWFAKLLGYFFEVIYNSGLE 240
           V  VQRW +PYLLGR+F VKT QRSLKFLLEQRV QPQYQ+W AKLLGY FEV+Y SGLE
Sbjct: 488 VFAVQRW-QPYLLGRKFTVKTDQRSLKFLLEQRVTQPQYQRWIAKLLGYSFEVVYQSGLE 547

Query: 241 NKAVDALSRVTSMVHLNQLTAPALIDLKVIKEEVENDDHLKDIIRRIKG-GEEITSR--- 300
           NKAVDAL+R+   V LNQ+T P LID+++IKEE+     L++IIR I+  G EI      
Sbjct: 548 NKAVDALTRIPPTVQLNQITTPTLIDVEIIKEEIRKVPTLQEIIRLIEEQGMEIPHYTLQ 607

Query: 301 ----------VWDDISMDFIEGLPKAARFEVILVVVDRFSKYGHFLTLKHPFDAKIVAEL 360
                     +W DISMDFIEGLPK+  ++VILVVVDR SKYGHFL LKHPF AK+VAE 
Sbjct: 608 QGMLKFKGDVIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYGHFLMLKHPFTAKVVAET 667

Query: 361 FVK------------------------------RSTTYHPQTNGQTEVVNRSVEAYLRCF 420
           FVK                              RS++YHPQ++GQT+V N+SVE Y RCF
Sbjct: 668 FVKEVVKLHGYRDKVFLSHFWKELFRLASTKLNRSSSYHPQSDGQTKVANKSVETYFRCF 727

Query: 421 CGERSKEWIKWIHWAEYWYNTTYQQSLGVSPFQVVYGRTPPPLVFYGDHNKINSTLDDQL 448
           CGER  EW +WIH AEYWYN TY  S G++PFQ VYGR PPPL++YGD    NSTLD QL
Sbjct: 728 CGERPHEWSQWIHSAEYWYNITYHSSSGITPFQAVYGRLPPPLIYYGDMETPNSTLDQQL 787

[Close]

BLAST of MELO.jh101893.1 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 6.3e-39
Identity = 91/251 (36.25%), Postives = 143/251 (56.97%), Query Frame = 0


Query: 1   MDEHIYHLELVFEVLREHKLYANKKKCIFAFQKVEYLGHIVSGQGLEVDPEKIRSIKQWP 60
           +DEH+  L LVFE L +  L     KC F  Q+  +LGH+++  G++ +PEKI +I+++P
Sbjct: 375 LDEHLQSLGLVFEKLAKANLKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYP 434

Query: 61  VPTNMRELRGFLGLTGYCKRFVQ--SSIVASLTRLLK--LGAFKWNEEAQLAFDKLKEAM 120
           +PT  +E++ FLGLTGY ++F+   + I   +T+ LK  +     N E   AF KLK  +
Sbjct: 435 IPTKPKEIKAFLGLTGYYRKFIPNFADIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLI 494

Query: 121 MTLPVLALPDFNLPFEVETDASGYGVGAVLIQNKRPIAFFSHNLALRDRAKPVYERELMA 180
              P+L +PDF   F + TDAS   +GAVL Q+  P+++ S  L   +      E+EL+A
Sbjct: 495 SEDPILKVPDFTKKFTLTTDASDVALGAVLSQDGHPLSYISRTLNEHEINYSTIEKELLA 554

Query: 181 VVLVVQRWRRPYLLGRRFVVKTGQRSLKFLLEQRVIQPQYQKWFAKLLGYFFEVIYNSGL 240
           +V   + +R  YLLGR F + +  + L +L   +    +  +W  KL  + F++ Y  G 
Sbjct: 555 IVWATKTFRH-YLLGRHFEISSDHQPLSWLYRMKDPNSKLTRWRVKLSEFDFDIKYIKGK 614

Query: 241 ENKAVDALSRV 248
           EN   DALSR+
Sbjct: 615 ENCVADALSRI 624

[Close]

BLAST of MELO.jh101893.1 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 4.1e-38
Identity = 90/251 (35.86%), Postives = 145/251 (57.77%), Query Frame = 0


Query: 1   MDEHIYHLELVFEVLREHKLYANKKKCIFAFQKVEYLGHIVSGQGLEVDPEKIRSIKQWP 60
           + EH+  ++LVF  L +  L     KC F  ++  +LGHIV+  G++ +P K+++I  +P
Sbjct: 374 LTEHLNSIQLVFTKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYP 433

Query: 61  VPTNMRELRGFLGLTGYCKRFV--QSSIVASLTRLLKLGAFKWNEEAQL--AFDKLKEAM 120
           +PT  +E+R FLGLTGY ++F+   + I   +T  LK       ++ +   AF+KLK  +
Sbjct: 434 IPTKDKEIRAFLGLTGYYRKFIPNYADIAKPMTSCLKKRTKIDTQKLEYIEAFEKLKALI 493

Query: 121 MTLPVLALPDFNLPFEVETDASGYGVGAVLIQNKRPIAFFSHNLALRDRAKPVYERELMA 180
           +  P+L LPDF   F + TDAS   +GAVL QN  PI+F S  L   +      E+EL+A
Sbjct: 494 IRDPILQLPDFEKKFVLTTDASNLALGAVLSQNGHPISFISRTLNDHELNYSAIEKELLA 553

Query: 181 VVLVVQRWRRPYLLGRRFVVKTGQRSLKFLLEQRVIQPQYQKWFAKLLGYFFEVIYNSGL 240
           +V   + +R  YLLGR+F++ +  + L++L   +    + ++W  +L  Y F++ Y  G 
Sbjct: 554 IVWATKTFRH-YLLGRQFLIASDHQPLRWLHNLKEPGAKLERWRVRLSEYQFKIDYIKGK 613

Query: 241 ENKAVDALSRV 248
           EN   DALSR+
Sbjct: 614 ENSVADALSRI 623

[Close]

BLAST of MELO.jh101893.1 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.2e-37
Identity = 149/602 (24.75%), Postives = 235/602 (39.04%), Query Frame = 0


Query: 3    EHIYHLELVFEVLREHKLYANKKKCIFAFQKVEYLGHIVSGQGLEVDPEKIRSIKQWPVP 62
            EH+ H++ V + L+   L  N+ KC F   +V+++G+ +S +G     E I  + QW  P
Sbjct: 577  EHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQP 636

Query: 63   TNMRELRGFLGLTGYCKRFV--QSSIVASLTRLLKLGA-FKWNEEAQLAFDKLKEAMMTL 122
             N +ELR FLG   Y ++F+   S +   L  LLK    +KW      A + +K+ +++ 
Sbjct: 637  KNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSP 696

Query: 123  PVLALPDFNLPFEVETDASGYGVGAVLIQNK-----RPIAFFSHNLALRDRAKPVYEREL 182
            PVL   DF+    +ETDAS   VGAVL Q        P+ ++S  ++       V ++E+
Sbjct: 697  PVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEM 756

Query: 183  MAVVLVVQRWRRPYLLG--RRFVVKTGQRSL--KFLLEQRVIQPQYQKWFAKLLGYFFEV 242
            +A++  ++ WR  YL      F + T  R+L  +   E      +  +W   L  + FE+
Sbjct: 757  LAIIKSLKHWRH-YLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEI 816

Query: 243  IYNSGLENKAVDALSRV-------------TSMVHLNQLTAPALIDLKVIKE-------- 302
             Y  G  N   DALSR+              S+  +NQ++       +V+ E        
Sbjct: 817  NYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLL 876

Query: 303  --------EVENDDHLKD---------------------IIRR-------IKGGEEI--- 362
                     VE +  LKD                     II++       I  G E+   
Sbjct: 877  NLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTN 936

Query: 363  --------------------------------------------TSRVWDDISMDFIEGL 422
                                                        + R W+ +SMDFI  L
Sbjct: 937  IILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITAL 996

Query: 423  PKAARFEVILVVVDRFSKYGHFLTLKHPFDAKIVAELF---------------------- 448
            P+++ +  + VVVDRFSK    +       A+  A +F                      
Sbjct: 997  PESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIF 1056

[Close]

BLAST of MELO.jh101893.1 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.2e-37
Identity = 149/602 (24.75%), Postives = 235/602 (39.04%), Query Frame = 0


Query: 3    EHIYHLELVFEVLREHKLYANKKKCIFAFQKVEYLGHIVSGQGLEVDPEKIRSIKQWPVP 62
            EH+ H++ V + L+   L  N+ KC F   +V+++G+ +S +G     E I  + QW  P
Sbjct: 577  EHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQP 636

Query: 63   TNMRELRGFLGLTGYCKRFV--QSSIVASLTRLLKLGA-FKWNEEAQLAFDKLKEAMMTL 122
             N +ELR FLG   Y ++F+   S +   L  LLK    +KW      A + +K+ +++ 
Sbjct: 637  KNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSP 696

Query: 123  PVLALPDFNLPFEVETDASGYGVGAVLIQNK-----RPIAFFSHNLALRDRAKPVYEREL 182
            PVL   DF+    +ETDAS   VGAVL Q        P+ ++S  ++       V ++E+
Sbjct: 697  PVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEM 756

Query: 183  MAVVLVVQRWRRPYLLG--RRFVVKTGQRSL--KFLLEQRVIQPQYQKWFAKLLGYFFEV 242
            +A++  ++ WR  YL      F + T  R+L  +   E      +  +W   L  + FE+
Sbjct: 757  LAIIKSLKHWRH-YLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEI 816

Query: 243  IYNSGLENKAVDALSRV-------------TSMVHLNQLTAPALIDLKVIKE-------- 302
             Y  G  N   DALSR+              S+  +NQ++       +V+ E        
Sbjct: 817  NYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLL 876

Query: 303  --------EVENDDHLKD---------------------IIRR-------IKGGEEI--- 362
                     VE +  LKD                     II++       I  G E+   
Sbjct: 877  NLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTN 936

Query: 363  --------------------------------------------TSRVWDDISMDFIEGL 422
                                                        + R W+ +SMDFI  L
Sbjct: 937  IILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITAL 996

Query: 423  PKAARFEVILVVVDRFSKYGHFLTLKHPFDAKIVAELF---------------------- 448
            P+++ +  + VVVDRFSK    +       A+  A +F                      
Sbjct: 997  PESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIF 1056

[Close]

BLAST of MELO.jh101893.1 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.2e-37
Identity = 149/602 (24.75%), Postives = 235/602 (39.04%), Query Frame = 0


Query: 3    EHIYHLELVFEVLREHKLYANKKKCIFAFQKVEYLGHIVSGQGLEVDPEKIRSIKQWPVP 62
            EH+ H++ V + L+   L  N+ KC F   +V+++G+ +S +G     E I  + QW  P
Sbjct: 577  EHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQP 636

Query: 63   TNMRELRGFLGLTGYCKRFV--QSSIVASLTRLLKLGA-FKWNEEAQLAFDKLKEAMMTL 122
             N +ELR FLG   Y ++F+   S +   L  LLK    +KW      A + +K+ +++ 
Sbjct: 637  KNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSP 696

Query: 123  PVLALPDFNLPFEVETDASGYGVGAVLIQNK-----RPIAFFSHNLALRDRAKPVYEREL 182
            PVL   DF+    +ETDAS   VGAVL Q        P+ ++S  ++       V ++E+
Sbjct: 697  PVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEM 756

Query: 183  MAVVLVVQRWRRPYLLG--RRFVVKTGQRSL--KFLLEQRVIQPQYQKWFAKLLGYFFEV 242
            +A++  ++ WR  YL      F + T  R+L  +   E      +  +W   L  + FE+
Sbjct: 757  LAIIKSLKHWRH-YLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEI 816

Query: 243  IYNSGLENKAVDALSRV-------------TSMVHLNQLTAPALIDLKVIKE-------- 302
             Y  G  N   DALSR+              S+  +NQ++       +V+ E        
Sbjct: 817  NYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLL 876

Query: 303  --------EVENDDHLKD---------------------IIRR-------IKGGEEI--- 362
                     VE +  LKD                     II++       I  G E+   
Sbjct: 877  NLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTN 936

Query: 363  --------------------------------------------TSRVWDDISMDFIEGL 422
                                                        + R W+ +SMDFI  L
Sbjct: 937  IILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITAL 996

Query: 423  PKAARFEVILVVVDRFSKYGHFLTLKHPFDAKIVAELF---------------------- 448
            P+++ +  + VVVDRFSK    +       A+  A +F                      
Sbjct: 997  PESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIF 1056

[Close]

BLAST of MELO.jh101893.1 vs. ExPASy TrEMBL
Match: A0A5A7UY29 (Retrotransposon polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold852G00390 PE=4 SV=1)

HSP 1 Score: 690 bits (1780), Expect = 1.35e-243
Identity = 355/474 (74.89%), Postives = 381/474 (80.38%), Query Frame = 0


Query: 1   MDEHIYHLELVFEVLREHKLYANKKKCIFAFQKVEYLGHIVSGQGLEVDPEKIRSIKQWP 60
           M+EHIYHLELVFEVLREHKLYANKKKC FAFQ+VEYLGHIVS QG+E DPEKI+SIKQWP
Sbjct: 113 MEEHIYHLELVFEVLREHKLYANKKKCSFAFQRVEYLGHIVSDQGVEADPEKIKSIKQWP 172

Query: 61  VPTNMRELRGFLGLTGYCKRFVQSSIVASLTRLLKLGAFKWNEEAQLAFDKLKEAMMTLP 120
           VP+N                            LLKLGAF+W +++Q  FD+LKEAMMTLP
Sbjct: 173 VPSN----------------------------LLKLGAFRWTKDSQTTFDRLKEAMMTLP 232

Query: 121 VLALPDFNLPFEVETDASGYGVGAVLIQNKRPIAFFSHNLALRDRAKPVYERELMAVVLV 180
           VLALPDF+LPFE+ETDASGYGVGAVL+QNKRPIAFFSH LALRDRAKPVYERELM VVL 
Sbjct: 233 VLALPDFSLPFEMETDASGYGVGAVLMQNKRPIAFFSHTLALRDRAKPVYERELMVVVLA 292

Query: 181 VQRWRRPYLLGRRFVVKTGQRSLKFLLEQRVIQPQYQKWFAKLLGYFFEVIYNSGLENKA 240
           VQRW RPYLLGRRFVVKT QRSLKFLLEQ+VIQPQ QKW AKLLGY FEV+Y   LENKA
Sbjct: 293 VQRW-RPYLLGRRFVVKTDQRSLKFLLEQQVIQPQDQKWIAKLLGYSFEVLYKPELENKA 352

Query: 241 VDALSRVTSMVHLNQLTAPALIDLKVIKEEVENDDHLKDIIRRIKGGEE----------- 300
            DALSRV SMV LNQLT P LIDLK+I++EVE DD+LK II+RI  GEE           
Sbjct: 353 ADALSRVPSMVQLNQLTVPVLIDLKLIQKEVEKDDYLKQIIKRITEGEEVPKYTIHHGLL 412

Query: 301 ----ITSRVWDDISMDFIEGLPKAARFEVILVVVDRFSKYGHFLTLKHPFDAKIVAELFV 360
               I SR+WDDISMDFIEGLPKAA FEVILVVVDRFSKYGHFLTLKHPFDAK VAE  +
Sbjct: 413 TPLEIPSRIWDDISMDFIEGLPKAAGFEVILVVVDRFSKYGHFLTLKHPFDAKTVAEPLL 472

Query: 361 K-----------RSTTYHPQTNGQTEVVNRSVEAYLRCFCGERSKEWIKWIHWAEYWYNT 420
           +           RST YHPQT+GQTEVVNRSVEAYLRCFCGER KEWIKWIHW EYWYNT
Sbjct: 473 EGTIRLDGTKLNRSTAYHPQTDGQTEVVNRSVEAYLRCFCGERPKEWIKWIHWVEYWYNT 532

Query: 421 TYQQSLGVSPFQVVYGRTPPPLVFYGDHNKINSTLDDQLKQRDIALGALKEHLR 448
           TYQ+SLGVS FQ VYG TPPPLVFYGDH+  NSTLDDQLKQRDIALGALKEHLR
Sbjct: 533 TYQRSLGVSLFQAVYGSTPPPLVFYGDHSTTNSTLDDQLKQRDIALGALKEHLR 557

[Close]

BLAST of MELO.jh101893.1 vs. ExPASy TrEMBL
Match: A0A5D3BEN4 (Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold85G00350 PE=4 SV=1)

HSP 1 Score: 701 bits (1808), Expect = 1.23e-235
Identity = 355/461 (77.01%), Postives = 385/461 (83.51%), Query Frame = 0


Query: 1    MDEHIYHLELVFEVLREHKLYANKKKCIFAFQKVEYLGHIVSGQGLEVDPEKIRSIKQWP 60
            M+EHIYHLELVFEVLREHKLYANKKKC FAFQ+VEYLGHIVSGQG+EVDPEKI+SIKQWP
Sbjct: 1067 MEEHIYHLELVFEVLREHKLYANKKKCSFAFQRVEYLGHIVSGQGVEVDPEKIKSIKQWP 1126

Query: 61   VPTNMRELRGFLGLTGYCKRFVQSSIVASLTRLLKLGAFKWNEEAQLAFDKLKEAMMTLP 120
                            Y       SI A LT+LLKLGAF+W E++Q  FD+LKEAMMTLP
Sbjct: 1127 ---------------NY------GSIAAPLTQLLKLGAFRWTEDSQTTFDRLKEAMMTLP 1186

Query: 121  VLALPDFNLPFEVETDASGYGVGAVLIQNKRPIAFFSHNLALRDRAKPVYERELMAVVLV 180
            VLALPDF+LPFE+ETDASGYGVGAVL+QNKRPIAFFSH LALRDRAKPVYER+LMAVVL 
Sbjct: 1187 VLALPDFSLPFEMETDASGYGVGAVLMQNKRPIAFFSHTLALRDRAKPVYERQLMAVVLA 1246

Query: 181  VQRWRRPYLLGRRFVVKTGQRSLKFLLEQRVIQPQYQKWFAKLLGYFFEVIYNSGLENKA 240
            VQRW RPYLLGRRFVVKT QRSLKFLLEQRVIQPQYQKW AKLLGY FE++Y  GLENKA
Sbjct: 1247 VQRW-RPYLLGRRFVVKTDQRSLKFLLEQRVIQPQYQKWIAKLLGYSFEILYKPGLENKA 1306

Query: 241  VDALSRVTSMVHLNQLTAPALIDLKVIKEEVENDDHLKDIIRRIKGGEEITSRVWDDISM 300
             DAL +V S+V LNQL  PALIDLK+I+EEV+ DD+LK II+RI  G     R+WDDISM
Sbjct: 1307 ADALFQVPSVVQLNQLIVPALIDLKLIREEVDKDDYLKQIIKRITEG----GRIWDDISM 1366

Query: 301  DFIEGLPKAARFEVILVVVDRFSKYGHFLTLKHPFDAKIVAELFVK-------------R 360
            DFIEGLPKAA F+VILVVVDRFSKYGHFLTLKHPFDAK VAE+FVK             R
Sbjct: 1367 DFIEGLPKAAGFDVILVVVDRFSKYGHFLTLKHPFDAKTVAEVFVKEVELFRLAGTKLNR 1426

Query: 361  STTYHPQTNGQTEVVNRSVEAYLRCFCGERSKEWIKWIHWAEYWYNTTYQQSLGVSPFQV 420
             T YHPQT+GQTEV NRSVEAYLRCFCGER KEWIKWIHWAEYWYNTTYQ+SLG SPFQ 
Sbjct: 1427 RTAYHPQTDGQTEVANRSVEAYLRCFCGERPKEWIKWIHWAEYWYNTTYQRSLGASPFQA 1486

Query: 421  VYGRTPPPLVFYGDHNKINSTLDDQLKQRDIALGALKEHLR 448
            VYGRTPPPLV YGDH+  NSTL++QLKQRDIALGALKEHLR
Sbjct: 1487 VYGRTPPPLVSYGDHSTTNSTLNEQLKQRDIALGALKEHLR 1501

[Close]

BLAST of MELO.jh101893.1 vs. ExPASy TrEMBL
Match: A0A5A7T3M0 (Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold278G00950 PE=4 SV=1)

HSP 1 Score: 701 bits (1808), Expect = 1.23e-235
Identity = 355/461 (77.01%), Postives = 385/461 (83.51%), Query Frame = 0


Query: 1    MDEHIYHLELVFEVLREHKLYANKKKCIFAFQKVEYLGHIVSGQGLEVDPEKIRSIKQWP 60
            M+EHIYHLELVFEVLREHKLYANKKKC FAFQ+VEYLGHIVSGQG+EVDPEKI+SIKQWP
Sbjct: 1067 MEEHIYHLELVFEVLREHKLYANKKKCSFAFQRVEYLGHIVSGQGVEVDPEKIKSIKQWP 1126

Query: 61   VPTNMRELRGFLGLTGYCKRFVQSSIVASLTRLLKLGAFKWNEEAQLAFDKLKEAMMTLP 120
                            Y       SI A LT+LLKLGAF+W E++Q  FD+LKEAMMTLP
Sbjct: 1127 ---------------NY------GSIAAPLTQLLKLGAFRWTEDSQTTFDRLKEAMMTLP 1186

Query: 121  VLALPDFNLPFEVETDASGYGVGAVLIQNKRPIAFFSHNLALRDRAKPVYERELMAVVLV 180
            VLALPDF+LPFE+ETDASGYGVGAVL+QNKRPIAFFSH LALRDRAKPVYER+LMAVVL 
Sbjct: 1187 VLALPDFSLPFEMETDASGYGVGAVLMQNKRPIAFFSHTLALRDRAKPVYERQLMAVVLA 1246

Query: 181  VQRWRRPYLLGRRFVVKTGQRSLKFLLEQRVIQPQYQKWFAKLLGYFFEVIYNSGLENKA 240
            VQRW RPYLLGRRFVVKT QRSLKFLLEQRVIQPQYQKW AKLLGY FE++Y  GLENKA
Sbjct: 1247 VQRW-RPYLLGRRFVVKTDQRSLKFLLEQRVIQPQYQKWIAKLLGYSFEILYKPGLENKA 1306

Query: 241  VDALSRVTSMVHLNQLTAPALIDLKVIKEEVENDDHLKDIIRRIKGGEEITSRVWDDISM 300
             DAL +V S+V LNQL  PALIDLK+I+EEV+ DD+LK II+RI  G     R+WDDISM
Sbjct: 1307 ADALFQVPSVVQLNQLIVPALIDLKLIREEVDKDDYLKQIIKRITEG----GRIWDDISM 1366

Query: 301  DFIEGLPKAARFEVILVVVDRFSKYGHFLTLKHPFDAKIVAELFVK-------------R 360
            DFIEGLPKAA F+VILVVVDRFSKYGHFLTLKHPFDAK VAE+FVK             R
Sbjct: 1367 DFIEGLPKAAGFDVILVVVDRFSKYGHFLTLKHPFDAKTVAEVFVKEVELFRLAGTKLNR 1426

Query: 361  STTYHPQTNGQTEVVNRSVEAYLRCFCGERSKEWIKWIHWAEYWYNTTYQQSLGVSPFQV 420
             T YHPQT+GQTEV NRSVEAYLRCFCGER KEWIKWIHWAEYWYNTTYQ+SLG SPFQ 
Sbjct: 1427 RTVYHPQTDGQTEVANRSVEAYLRCFCGERPKEWIKWIHWAEYWYNTTYQRSLGASPFQA 1486

Query: 421  VYGRTPPPLVFYGDHNKINSTLDDQLKQRDIALGALKEHLR 448
            VYGRTPPPLV YGDH+  NSTL++QLKQRDIALGALKEHLR
Sbjct: 1487 VYGRTPPPLVSYGDHSTTNSTLNEQLKQRDIALGALKEHLR 1501

[Close]

BLAST of MELO.jh101893.1 vs. ExPASy TrEMBL
Match: A0A5D3CTA1 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold790G00220 PE=4 SV=1)

HSP 1 Score: 596 bits (1536), Expect = 9.14e-202
Identity = 315/580 (54.31%), Postives = 381/580 (65.69%), Query Frame = 0


Query: 1   MDEHIYHLELVFEVLREHKLYANKKKCIFAFQKVEYLGHIVSGQGLEVDPEKIRSIKQWP 60
           M+EH  HLE+V E+LRE +LYAN  KC FA  ++ YLGH +S +G+EVDPEKIR++K+WP
Sbjct: 336 MEEHGQHLEVVLEILRESELYANFDKCHFAKTRISYLGHYISKKGIEVDPEKIRAVKEWP 395

Query: 61  VPTNMRELRGFLGLTGYCKRFVQS--SIVASLTRLLKLGAFKWNEEAQLAFDKLKEAMMT 120
            P+N+RELRGFLGLTGY +RFVQ+  SI A LT+LLK GA+KW EE + AF+KLK+AMMT
Sbjct: 396 APSNVRELRGFLGLTGYYRRFVQNYGSISAPLTQLLKSGAYKWTEETEAAFEKLKKAMMT 455

Query: 121 LPVLALPDFNLPFEVETDASGYGVGAVLIQNKRPIAFFSHNLALRDRAKPVYERELMAVV 180
           LPVLA+PDFNLPFE+E+DASG+GVGAVL+Q+KRP+A+FS  L+ RDRA+PVYEREL+AVV
Sbjct: 456 LPVLAMPDFNLPFEIESDASGFGVGAVLVQDKRPVAYFSKVLSTRDRARPVYERELIAVV 515

Query: 181 LVVQRWRRPYLLGRRFVVKTGQRSLKFLLEQRVIQPQYQKWFAKLLGYFFEVIYNSGLEN 240
             VQRW RPYLLGR+F VKT QRSLKFLLEQRVIQPQYQ+W AKLLGY FEV+Y  GL+N
Sbjct: 516 WAVQRW-RPYLLGRKFTVKTDQRSLKFLLEQRVIQPQYQQWIAKLLGYSFEVLYKPGLKN 575

Query: 241 KAVDALSRVTSMVHLNQLTAPALIDLKVIKEEVENDDHLKDIIRRIK------------- 300
           KA DALSR+    HLNQLTAPAL+D++VI++EV+ D  L++II  I+             
Sbjct: 576 KAADALSRLGPTAHLNQLTAPALLDVEVIQKEVKKDPALREIISMIEEQGIAIPHYTCHQ 635

Query: 301 ------------------------------GGE--------------------------- 360
                                         GG                            
Sbjct: 636 GILKFKGRLVLSKASTLIPTIMHTYHDSVFGGHSGFLRTYKRMAGELYWKGMKKDVQKYC 695

Query: 361 -----------------------EITSRVWDDISMDFIEGLPKAARFEVILVVVDRFSKY 420
                                  EI   +W DISMDFIEGLPK+  +EVILVVVDR SKY
Sbjct: 696 DECMICQKNKSSALSPAGLLLPLEIPDAIWSDISMDFIEGLPKSYGWEVILVVVDRLSKY 755

Query: 421 GHFLTLKHPFDAKIVAELFVK-------------------------------------RS 448
            HFLTLKHP+ AK VAE+FVK                                     RS
Sbjct: 756 AHFLTLKHPYTAKTVAEVFVKEVVRLHGFPKSIVSDRDKIFLSHFWSEMFRLAGTKLNRS 815

[Close]

BLAST of MELO.jh101893.1 vs. ExPASy TrEMBL
Match: A0A5A7SP02 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold81G00250 PE=4 SV=1)

HSP 1 Score: 595 bits (1534), Expect = 1.16e-201
Identity = 300/495 (60.61%), Postives = 369/495 (74.55%), Query Frame = 0


Query: 1   MDEHIYHLELVFEVLREHKLYANKKKCIFAFQKVEYLGHIVSGQGL-EVDPEKIRSIKQW 60
           M+EH+ HLE+V  +L+E +LYAN +KC FA  ++ YLGH +S QG+ +VDPEKIR++ +W
Sbjct: 308 MEEHVQHLEVVLGLLKEKELYANLEKCSFAKPRIGYLGHFISKQGIIKVDPEKIRAVSEW 367

Query: 61  PVPTNMRELRGFLGLTGYCKRFVQS--SIVASLTRLLKLGAFKWNEEAQLAFDKLKEAMM 120
           P  TN++E+RGFLGLTGY +RFV+   ++ A LT+LLK G++KWN EA+ AFDKLK AMM
Sbjct: 368 PTSTNVQEVRGFLGLTGYYRRFVKDYGTLAAPLTQLLKTGSYKWNGEAEAAFDKLKRAMM 427

Query: 121 TLPVLALPDFNLPFEVETDASGYGVGAVLIQNKRPIAFFSHNLALRDRAKPVYERELMAV 180
           TLPVLA+PDFNLPFE+E+DASG+GVGAVL Q ++PIA+FS  L +RDRA+ VYEREL+AV
Sbjct: 428 TLPVLAMPDFNLPFEIESDASGFGVGAVLTQCRKPIAYFSKTLCMRDRARLVYERELIAV 487

Query: 181 VLVVQRWRRPYLLGRRFVVKTGQRSLKFLLEQRVIQPQYQKWFAKLLGYFFEVIYNSGLE 240
           V  VQRW +PYLLGR+F VKT QRSLKFLLEQRV QPQYQ+W AKLLGY FEV+Y SGLE
Sbjct: 488 VFAVQRW-QPYLLGRKFTVKTDQRSLKFLLEQRVTQPQYQRWIAKLLGYSFEVVYQSGLE 547

Query: 241 NKAVDALSRVTSMVHLNQLTAPALIDLKVIKEEVENDDHLKDIIRRIKG-GEEITSR--- 300
           NKAVDAL+R+   V LNQ+T P LID+++IKEE+     L++IIR I+  G EI      
Sbjct: 548 NKAVDALTRIPPTVQLNQITTPTLIDVEIIKEEIRKVPTLQEIIRLIEEQGMEIPHYTLQ 607

Query: 301 ----------VWDDISMDFIEGLPKAARFEVILVVVDRFSKYGHFLTLKHPFDAKIVAEL 360
                     +W DISMDFIEGLPK+  ++VILVVVDR SKYGHFL LKHPF AK+VAE 
Sbjct: 608 QGMLKFKGDVIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYGHFLMLKHPFTAKVVAET 667

Query: 361 FVK------------------------------RSTTYHPQTNGQTEVVNRSVEAYLRCF 420
           FVK                              RS++YHPQ++GQT+V N+SVE Y RCF
Sbjct: 668 FVKEVVKLHGYRDKVFLSHFWKELFRLASTKLNRSSSYHPQSDGQTKVANKSVETYFRCF 727

Query: 421 CGERSKEWIKWIHWAEYWYNTTYQQSLGVSPFQVVYGRTPPPLVFYGDHNKINSTLDDQL 448
           CGER  EW +WIH AEYWYN TY  S G++PFQ VYGR PPPL++YGD    NSTLD QL
Sbjct: 728 CGERPHEWSQWIHSAEYWYNITYHSSSGITPFQAVYGRLPPPLIYYGDMETPNSTLDQQL 787

[Close]

BLAST of MELO.jh101893.1 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 141.0 bits (354), Expect = 2.4e-33
Identity = 69/129 (53.49%), Postives = 88/129 (68.22%), Query Frame = 0


Query: 7   HLELVFEVLREHKLYANKKKCIFAFQKVEYLG--HIVSGQGLEVDPEKIRSIKQWPVPTN 66
           HL +V ++  +H+ YAN+KKC F   ++ YLG  HI+SG+G+  DP K+ ++  WP P N
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 67  MRELRGFLGLTGYCKRFVQS--SIVASLTRLLKLGAFKWNEEAQLAFDKLKEAMMTLPVL 126
             ELRGFLGLTGY +RFV++   IV  LT LLK  + KW E A LAF  LK A+ TLPVL
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNSLKWTEMAALAFKALKGAVTTLPVL 122

Query: 127 ALPDFNLPF 132
           ALPD  LPF
Sbjct: 123 ALPDLKLPF 131

The following BLAST results are available for this feature:

BLAST of MELO.jh101893.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0059954.1	2.79e-243	74.89	retrotransposon polyprotein [Cucumis melo var. makuwa] >TYK07597.1 retrotranspos...	[more]
KAA0037388.1	2.53e-235	77.01	transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]	[more]
TYJ97524.1	2.53e-235	77.01	transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]	[more]
TYK15157.1	1.89e-201	54.31	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0032862.1	2.39e-201	60.61	reverse transcriptase [Cucumis melo var. makuwa]	[more]

BLAST of MELO.jh101893.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P04323	6.3e-39	36.25	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P20825	4.1e-38	35.86	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
Q9UR07	1.2e-37	24.75	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	1.2e-37	24.75	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	1.2e-37	24.75	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of MELO.jh101893.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UY29	1.35e-243	74.89	Retrotransposon polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A5D3BEN4	1.23e-235	77.01	Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5A7T3M0	1.23e-235	77.01	Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3CTA1	9.14e-202	54.31	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7SP02	1.16e-201	60.61	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold81...	[more]

BLAST of MELO.jh101893.1 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	2.4e-33	53.49	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 1..48 e-value: 1.1E-12 score: 50.3
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 50..138 e-value: 9.5E-23 score: 82.0
IPR041577	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	PFAM	PF17919	RT_RNaseH_2	coord: 101..196 e-value: 9.3E-29 score: 99.4
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 346..444 e-value: 2.8E-22 score: 81.0 coord: 287..345 e-value: 2.3E-7 score: 32.3
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 1..235
None	No IPR available	PANTHER	PTHR24559:SF324	TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEIN	coord: 1..235
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 132..246 e-value: 1.109E-37 score: 131.461
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 210..412 score: 10.061149
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..232
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 290..406

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO.jh101893.1.t1	MELO.jh101893.1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding