MELO.jh101847.1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh101847.1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Gag/pol protein
Location	chr06: 17880119 .. 17888678 (+)
RNA-Seq Expression	MELO.jh101847.1
Synteny	MELO.jh101847.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGGCTTGGCTTGGCTTGTACGGATGGATCGGCTCGGTGCGTTTTGCTTACGGTCGGCTTCGATTGGCTCGGTTCGGCTCCAGTTCTTTGTTTGGCGCCAGTTTATGCTGGTTTTGGGCCGGTTCTTCATATTTTATGCTGGTTCAAGCATTTTTAGGCCTGTTTGGAGCGATTTTTGACTAGTTCAAGGTTCTGGCTCGATTTGAAGCTTTTTGAAGGTTTTGAGATCGGTTTTGGAGCTTTGGAAGCACTTTAGGGTATTTTAGGGTACTCCATCAAATTAATATTGTAATAATTTAGTTTTATCTTAATTTAGAGAGCCAAAACTAGTCTATTTTAGGGTGTTTTAATTGTTCTTGCATATGATGTATGTTTAATTATTTCTAAAAATTATATGTGCATATTATATGACATATAGTTTAAAATCCCACCATAGGTTAACATGTTCATGCATGTTGAGAAAATTAATATGGAAATTAATTAATATGATTAATTAATGGTTAAATTAATATGATTAGTTTAAAAATAATTGTACTAATTTTATTAAATATGATTTAATAAAATTAATCAATTATTGAAATACCATATTAATTTGTTGTTGTTCTAGATGAATGATTATAGGTTATCTTAAAGTTTTATCTTGTATTAGACATTAAAATCTATAATAAAGATAAGGAGTATGTTCACTTAGGTTAATACCATATCTTCCAAAATTAGATTTAGGTTTATATCTTGTAAAACTAGGTTACAAGAGGCTCACCTAATTCGATCTTGTCAAAAAGTCAGATAAGATGACTAAGGAGTGGAGGTTTTTAAATTGACGGTTTACGGAACACCTCCTACCTGGAGATCTTCATCGGTTCTTGAGCCTAGTTAACCTAGTTAACCTAATTTTATGAGCATGCGTGAGAGATGTAAGGTAATAAAATTGGTTTATCACCTAGACATCGTAGGTTAAATCCAGTATAAATGTTATGCTTGAATGTTTTACCTAGATTTAGGATTTGTTTAAGTTAGCCTAAATTAAATCCTAAATAATTTACCCAAAATTTAAAACACTTCGGTTGGAGAAAAGTATCGTACTTTTAACTCTAGCGTCCCCAAGAGTTCAAACCGTGAGGTTCATGCAGGGCTTTGGGCCGTGCATAGAAGTGGACTCCATTCAGAGAGTGTTTGCATGAGCTATGAACAAGGTGAATGAGGGAAGTAGTTCATAGTAAGTGGGTGAGGGATATATGACAATACATCCCACGGTCTCTTCCATTAAGTCGCACCGTGAGATTCCTATAATGCGCCTGCTTGTTTGCCCTGGAGCGACGTTCCATTCGAAGGGCTGTATTATAGGATTTGGAACACCGCGAACTCTATATTTTGGATAGGGTCTCTTAGATAAGTTTTCATATTGTCTTTCCACTTTCGGGAGCATAATGATTCTCATCTCTGAGAACCGAAAATGGAGGGTCACACTTACAAGAATTATTAAAATAGTTAGTATATTCTTGACCGAAGTAAACGATAACTAAATGCTAAGTAAATATAAGATATTTGTGAGTTAGCATTTGGTTAAGATTTTCTTGATTCAAAGGACGAGTAATCGACTACCCCTTGGTAGAGGTTATTCTGACCTTTGAATTATCGTTGCAAAACATAATAAAAGGGTATATTATTAAAAGTTTTGCTAAAAAGATTGGTTTATTTTGATTATAGTTTCTAAACAAAGTGTGTTTGTTTTTCAGCATGAATAGTTTGATAGTTCAATTATTAGCTTCCGAAAAACTTAACGGCGATAACTATGCGGCATGGAAATCAAATTTGAACGCAATACTAGTGGTTGATGATTTAAGATTTATCTTAACTGAGGAATGTCCTAAAACCTCTGCCTCAAATGCGTGCCGAGCTAGTCGGAAAGCATATGATCGATGGATAAAAGCAAATGAGAAAGCCCATGTCTACATTCTTGCTAGCATGTCAGATGTTTTAGCAAATGGTCCCTAAGACACGAGGCAATCAAATACATTTACACTAAGCGTATGAAGGAAGGGACCTCTGTTAGAGAACATGTCCTGGACATGATGATGCACTTCAATATTGCTGACGTAAATGGAGGTGTCATTGATGAGACTAATTAAGTTAGCTTTATTTTAGAGTCTCTTCTGAAGAGCTTCATACCATTTCAGACGAATGCATCCCTGAATAAGATAGAGTTTAACTTGACAACCCTTCTGAATGAATTTCAGCTGTTCCAAAATCTTACCAAAGGTAAAGGAAAAGAAGTAGAAGCAAATGTTGCTACTACAAAAGGAAAATTTGAAAGAGGATCGTCCTCTAAGTCTAAAGCTGGACCCTCAAAATCTAATAGAAAGATTGAGAAGAAGGGAAAGGGGAAGACTCCTAAGCAGAACAAGGGTAAGAAGACTGCAGAAAAAGGTAAATGTTACCACTGTGGTGAAAATGGGCACTGGCTGAGAAACTACCCAAAATACATTGCATAGAAAAAAGCAGAGAAAGAAGCACAAGGTAAATATGATTTACTTGTTCTTGAAACATGTTTAGTGGAAAATGAAAATTCTACCTTGATATTAGATTTAGGAGCCATTAATCATATTTGTTTCTCATTTCAGGAAACTAGTTCTTGGAAAAGGCTTTTTGAAGGCAAGATCACTCTCAAAGTTGGAACTGGAGAAATGGTCTCAGCTAAAGCAGTGGGAGATTTGAAGTTGTTTTTTAATGATAGATATATCTTACTCAAGAATGTCTTATATGCACCTTAAAAGAAGAGAAATTTGATATCTATCTCTTGTTTGTTAGAACATATGTATAGAATATCTTTTGAAATTAATGAAGCGTTCATTTTTCGAAAAGGTGTTCATATTTGTTCTGCTATATTTGAAAACAACTTATATAAGTTAAGACCAACACGAGCAAATTTTGCCTTAAATACTGAGATGTTTAAAACAGCTGAAACTCAGAATAAAGACAAAAAGTTTCTTCTATTGCCTTCTTATGGCACTTAAGACTCGATCACATTAATCTCAATAGGATTGGGAGATTGGTTAAGAGTGGACTTCTAAGTCAGTTAGAAGATAACTCTTTACCTCCTTGTGATTCTTGTCTTGAAGGAAAAATGACCAAAAGATCTTTTACTGCAAAAGGTCTTAGAGCCAAAACACCTTTGGAGCTCGTACATTCGGACCTTTGTGGACCAATGAATGCCAAGGCTCGGGGAGGATACGAATATTTCATTAGTTTCATTGATGATTATTCAAGGTATGGTCATGTTTACCTAATTCACAACAAGTCTGATTCTTTTGAAAAGTTCAAAGAATATAAGGCTCAAGTTGAAAATGAATCAGGTAAAACAATAAAGACATTTCAATCAGATCGAGGTGGAGAGTATATGGACTTGCGATTCCAAGACTATTTGATAGAACATGGAATCCAATCACAACTCTCTGTACCTAGTACGCCTCAGCAGAACGGTGTATTAGAAAGAAGAAACTGAACTTGTTAGACATGGGTCGCTCTATGATTAGTTTTGCTCAGTTGCCAGATTCTTTTTAGGGATATGCTTTAGAAACAGCTATCTATATTTTAAATAACGTTCCCTCTAAAACTGTTTCTGAAACACCTTATGAGCTATGGAAAGGGTGTAAAGGTAGTTTACGTCACTTTAGGATTTGGGGATGTCCAACACACGTGTTGGTGCAAAACCCTAAAAAATTGGAACGTCGTTCAAAATTATGCCTATTTGTAGGTTATCCAAAAGAATGAAAATGTGGTTTATTTTATGACCCTCAAGAAAATAAAGTATTTGTATCGAAAAATGCTACGTTCTTAGAGGAAGACCACATAAGAAATCATCAAACTCGCAGTAAACTAGTATTAGAAGAGATTTCCAAAAATTCTACAGATATACCTAGTTCATCTACTTAAGTAGTTGATAAAACTAGGAATATTGGTCAAACACATTCTACTCAAGAGTTAGGAGAGCCTCGTCGTAGTGGGAGGGTTGTAAGATAGCCTGATCGCTATTTAGGTTTAGGTGAAACTCAACTCATCATATATGATGATGGGATAGAGGATTCATTGACCTATAAACAGGCAATGAATGATGTGGACTGTGACCAATGGATCAAAGCCATGAACCTCGAAATGGAATCTATGTATTCCAATTCTGTCCGGACTTTAGTAGGTCAAACAAATGACGTAAAACCTATTGGTTGTAAATGGATCTACAAGAGAAAACGAGATCAAGCTGGTAAAGTACAAACTTTCAAAGCTCGACTAGTGGCAAAAGGTTATACACAAAAGGAGGGAATAGATTATGAAGAAACTTTCTCTCCTATTGCCATGATAAAGTCGATTAGAATACTCTTATCCGTTGCCACTTTTTATGATTATGAAATTTGGCAGATGGATGTCAAGACAACCTTTTTGAATGGAAATCTTGAGGAGAGTATCTATATGGTCCAACAATAGGGGTTTATTCAAAAGGATCAAGAACAAAAAGTTTGTAAACTTAAAAAATCCATATATGGATTAAAGCAAGCATCTAGATCCTGGAATATAAGATTTGATACTGTCATCAAATTTTATGGTTTTGAACAGAAAGTTGATGAACCTTGTGTTTACAAAAGGATCATCAAATTTACTGTAGCATTCTTAGTTTTGTATGTAGATGACATTCTACTCACTAGGAATGATGTAGGTCATCTAACTGATATTAAGGAATGACTAGCTATGCAATTCCAAATGAAAGATTTGGAAAATGCACAATATGTTCTTGGTATCCAAATAGTTCGGAACCGAAAGAACAAAACTCTAGCCATGTCTCAAACATCTTATATAGACAAAATCTTATCAAGATATAAGATGCAGAATTCCAAAAAGGGTTTGTTACCCTACAAATATGGAATTCATTTATTAAAAGAACAATGTCCAAAGATACCTCAAGAAGTTGAGGATATGAGTAACATTCCCTATGCTTCTGCTATTGGGAGCCTGATGTATGCAATGTTATGTACTAAACCTGACATTTGCTATTCAGTGGGGATAGTTAGTAGATATCAGTCCAATCTTGGACGTGATCATTGGACAACCGTTAAGAATATTCTAAAATATCCTAGAAGAACAAAAGACTACATGCTTGTGTATGGTTCTAAGGATCTGATCCTTACTGGATACACTGTCTCCGATTTTCAAACTGATAGAGATGCTAGAAAGTCTACATCAGGATCAGTTTTCACTCTGAACGAAGGAGCAGTAGTATGGAGAAGCATAAAACAATCCTGTATTGCTAACTGTGAAGCAGCGAAAGAAGCAATATGGCTTAAAAAGTTCTTAACAGATTTGGAAGTTGTTCCAAATATGTATTTGCCAATCACCTTATACTGTGACAACAGTGTGCAGTTGCAAATTCATGAGAACCTAGAAGTCATAAACGAGGAAAGCACATTAAACGAAAATACCATCTTATCAGGGAAATTTTACATTGAGGAGATGTTACAGTAACCAAAATCTCCTCCGAGCAAAACATGGCTGATTCGTTTACAAAAGCTCTCACGGCTAAAGTGTTTGAGAGCCACCTACATGGTTTAGGTCTACATGGTTTGTAAACTAGGACAAGTGGGAGAGTTATTGGGATTATGCTCTAGTTTATATATATGTTTATTGTACTCATGTATATATACCCTTCTCTCATTATAAAATTCTAACTTACTTGGAGTTTTAGTCCAAGTGGGAGTTTGTTGGAATTTGTGTCCTAAAACTCGTACTTTGTTATTTGATTCAATAAATTTTATTATTGAATGCTATAATCTTAAAACCAATATTTCCCCACTCATAATGCATCTCAAAATGATAAGGATGCATATGACTGCTGGACAATGGCCAATGACAAGGCCCGCCTCTACATCTTGGCTAGTATGTCTAACATACTAAGTAAGAAACATGAGATCATGGTAACTGCATGTCAGATCATGGACTCCCTTAGAGAGATGTTTGGGCAACCATTCATTCAAATCAAACAAGAGGCTATTAAATACAATTATAATGCACATATGAAAGAGGGCTAATATGTTAAAGAACATATTCTCGACATAATAGTCAACTTCAACGTAGCAGAAATGAACGGAGCGGTCTTTGATGAGAAGAGTCAAGTGTCCTATATCTTGAAATCTCTTTCGAAGAGCTTTCTTCAATTTTGCGTCAATGTGGAAATGAACAAGATAGAGTACAAAATGACTATCCTCTTAAAAGAGTTGCAAACTTTTTAGTCTCTTAAGGGACATAAAGAAAGAGAGACAAATGTTGCCCATTATAGGAGGTTTACACCTTCATCTTCTAGATCTAAGAAAATTTAGAAAAGGAAAAGAGGGAAAAGGAAAGGTCCTACTGTTGCTGCTGAGGGCAAAGGGAAGGCTAAGGTAGCCATCAAGGGAAAATGTTTCCACTACAATGTGGATGGACATTGGAAAAGAAACTGCCCCAAGTACCTTGCTAAGAAGAAAGAAAAGGAAGGTGAATATGATTTACTTGTCTTAGAAACATGCTTAGTGGAAAATGACCAAAAAGCCTGGATACTTGATTCAAGGGCCACTAACCATGTTTGTTATTCTTTACAGAAAACTATTTCCTTTAAGCAGCTTGAAGAAGGTGAGATGACACTCATGGTTGGAACGGGAGATGTCATTTCAACTCGTGTACTTCATCTCTTTTATAAATGATTCTTCAAGGTATGATTATTTATACTTAATGGAGCATAAGTCTGAAGCTCTTGAAAAGTTCAAGGAGTATAAGGCTGAAGTTGAAAATCTATTAAGTAAAAAGATTAAAATACTTCGATCTGATCGAGGTGGAGAGTACATGGATTTGAGATTCCAGGATTATATGATAGAACATGGAATCCAATCCCAACTCTCAGCACCTGGTACAGTTCAACAAAATGGTGTATTAGAAAGGAGAAACAGAACCTTGTTAGACATGGTTCATTCAATGATGATTTATGCTCAATTTCCTAGCTCGTTTTGGGGGTATGCAATAGTGACTGTAGTTCATATCTTGAACAATGTTCCCTCAAACAGTGTTTCTGAAACATCTTTTTAGTTATGGAGAGGATGTAAACCTAGTTTAAGTCACTTCAGAATCTGAGATTTTCCAGCACACGTGTTAGTGAAAAATTCCAAGAAGTTGGAACCTCGTTCAAGGTTATGCCAATTTGTTGGTTACCCTAAAGAGACTAGAGGTAGTTTATTCTTCGATCTATAAGAAAATAGAGCGTTTGTATCGACAAATGCTATTTTTTGCAAGAAGACCACATGAGAGATCATAAACCACAAAGCAAATTAGTATTAAATGAAGCTACTGATGAATTAACAAGGGTTGTTGATGAAGTTGATCCCTCATCAAGAGTTGATGAAACCACCACATTAGGTTAGTCTCATCCTTCTCAATTGTTGAGAATGCCTCGATGCAGTGGGAGGATTGTATCACAACCTAATCGTTACTTGGGTTTAACTGAAACTCAAGTTGTCATACCAGATTATGGTGTTGAAGATCCATTGTCCTATAAACAGGCAATGAATGATGTAGATAAGGACCAATGGGTCAAAGTCATGGACCTTGAAATGGAATCTAGGTACTTCAATTCAGTGTGGGAACTTGTAGATCTACCTAAAGGGGTAAAACCTATAGGGTGTAAATAGATCTATAAGAGAAAGAGAGATTCAGTTGGGAAGGTACAGACCTTCAAAGCTAGACTTGTAGCAAAAGGGTATACCCAAAGGGAAGGGGTTGACTATAAGGAAACTTTTTCCCCTGTTGCTATGTTAAAATCTATAAGGATTCTCTTGTCCATAGCCACATTTTATGATTATGAAATATGGCAAATGGATGTCAAGACTGCTTTTTTGAATGGCAATCTTGAAAAGAGTATCTTTATGTCTCAGCTCGAGGGGTTCATAAAACAAGGTTAAGAGCAAAAAGTTTGCAAGATGAATCGATCCATTTATGGGTTGAAACAAGCATCTAGATCATAGAACATTAGGTTTGATACTGCGATCAAATCCTATGGTTTTGACCAAAACGTTGATGAACCTTGTGTATATAAGAAAATCAACAAAGGTAAAGTAGCTTTCTTAGTACTTTATGTGGACGATATCCTCCTCATTAGGAATGATGTGGGATACCTTACTGACGTTAAAACTTGGCTAGCAGCCCATTTCCAAATGAAAGATTTGGAAGAGGCACAATATGTTCTTGGGATCTAAATCATAAGGGATCGTAAGAACAAAATGCTAGCACTGTCTCAAGCAACCTATATCGAACAAACATATATCGACAAAATGTTTGTTCGATATTTGATGCAAAACTCTAAGAAGGGTTTATTACCTTTCAGGCATGGGGTTCACTTGTCTAAGGAACAGTGTCCTAAGACACCTCAAGAAGTTGATGATATGATACATATTCCCTATGCCTCAACTGTGGACAGCTTAATGTATGCTATGCTCTGCACTAGGCCAGACATTTGTTATGCAGTGGGAATAGTTAGTAGGTATTAG

mRNA sequence

ATGCGGCTTGGCTTGGCTTGTACGGATGGATCGGCTCGGTGCGTTTTGCTTACGGTCGGCTTCGATTGGCTCGGTTCGGCTCCAGTTCTTTGTTTGGCGCCAGTTTATGCTGGTTTTGGGCCGGTTCTTCATATTTTATGCTGCATGAATAGTTTGATAGTTCAATTATTAGCTTCCGAAAAACTTAACGGCGATAACTATGCGGCATGGAAATCAAATTTGAACGCAATACTAGTGGTTGATGATTTAAGATTTATCTTAACTGAGGAATGTCCTAAAACCTCTGCCTCAAATGCGTGCCGAGCTAGTCGGAAAGCATATGATCGATGGATAAAAGCAAATGAGAAAGCCCATGTCTACATTCTTGCTAGCATGTCAGATGTTTTAGCAAATGAGTCTCTTCTGAAGAGCTTCATACCATTTCAGACGAATGCATCCCTGAATAAGATAGAGTTTAACTTGACAACCCTTCTGAATGAATTTCAGCTGTTCCAAAATCTTACCAAAGGTAAAGGAAAAGAAGTAGAAGCAAATGTTGCTACTACAAAAGGAAAATTTGAAAGAGGATCGTCCTCTAAGTCTAAAGCTGGACCCTCAAAATCTAATAGAAAGATTGAGAAGAAGGGAAAGGGGAAGACTCCTAAGCAGAACAAGGGTAAGAAGACTGCAGAAAAAGATTTAGGAGCCATTAATCATATTTGTTTCTCATTTCAGGAAACTAGTTCTTGGAAAAGGCTTTTTGAAGGCAAGATCACTCTCAAAGTTGGAACTGGAGAAATGGTCTCAGCTAAAGCAGTGGGAGATTTGAAGTTGATTGGGAGATTGGTTAAGAGTGGACTTCTAAGTCAGTTAGAAGATAACTCTTTACCTCCTTGTGATTCTTGTCTTGAAGGAAAAATGACCAAAAGATCTTTTACTGCAAAAGGTCTTAGAGCCAAAACACCTTTGGAGCTCGTACATTCGGACCTTTGTGGACCAATGAATGCCAAGGCTCGGGGAGGATACGAATATTTCATTAGTTTCATTGATGATTATTCAAGGTATGGTCATGTTTACCTAATTCACAACAAGTCTGATTCTTTTGAAAAGTTCAAAGAATATAAGGCTCAAGTTGAAAATGAATCAGGTAAAACAATAAAGACATTTCAATCAGATCGAGGTGGAGAGTATATGGACTTGCGATTCCAAGACTATTTGATAGAACATGGAATCCAATCACAACTCTCTGTACCTAGTACGCCTCAGCAGAACGGTGAAACTCAACTCATCATATATGATGATGGGATAGAGGATTCATTGACCTATAAACAGGCAATGAATGATGTGGACTGTGACCAATGGATCAAAGCCATGAACCTCGAAATGGAATCTATGTATTCCAATTCTGTCCGGACTTTAGTAGGTCAAACAAATGACGTAAAACCTATTGGTTGTAAATGGATCTACAAGAGAAAACGAGATCAAGCTGGTAAAGTACAAACTTTCAAAGCTCGACTAGTGGCAAAAGGTTATACACAAAAGGAGGGAATAGATTATGAAGAAACTTTCTCTCCTATTGCCATGATAAAGTCGATTAGAATACTCTTATCCGTTGCCACTTTTTATGATTATGAAATTTGGCAGATGGATGTCAAGACAACCTTTTTGAATGGAAATCTTGAGGAGAAACAATGTCCAAAGATACCTCAAGAAGTTGAGGATATGAGTAACATTCCCTATGCTTCTGCTATTGGGAGCCTGATGTATGCAATGTTATGTACTAAACCTGACATTTGCTATTCAGTGGGGATAGTTAGTAGATATCAGTCCAATCTTGGACGTGATCATTGGACAACCGTTAAGAATATTCTAAAATATCCTAGAAGAACAAAAGACTACATGCTTGTGTATGGTTCTAAGGATCTGATCCTTACTGGATACACTGTCTCCGATTTTCAAACTGATAGAGATGCTAGAAAGTCTACATCAGGATCAGTTTTCACTCTGAACGAAGGAGCAGTAGTATGGAGAAGCATAAAACAATCCTGTATTGCTAACTGTGAAGCAGCGAAAGAAGCAATATGGCTTAAAAAGTTCTTAACAGATTTGGAAGTTGTTCCAAATATGTATTTGCCAATCACCTTATACTGTGACAACAGTGTGCAGTTGCAAATTCATGAGAACCTAGAAGTCATAAACGAGGAAAGCACATTAAACGAAAATACCATCTTATCAGGGAAATTTTACATTGAGGAGATGTTACAGTATGATTATTTATACTTAATGGAGCATAAGTCTGAAGCTCTTGAAAAGTTCAAGGAGTATAAGGCTGAAGTTGAAAATCTATTAAGTAAAAAGATTAAAATACTTCGATCTGATCGAGGTGGAGAGTACATGGATTTGAGATTCCAGGATTATATGATAGAACATGGAATCCAATCCCAACTCTCAGCACCTGGTACAGTTCAACAAAATGGTGTATTAGAAAGGAGAAACAGAACCTTGTTAGACATGGTTCATTCAATGATGATTTATGCTCAATTTCCTAGCTCGTTTTGGGGTGGGAGGATTGTATCACAACCTAATCGTTACTTGGGTTTAACTGAAACTCAAGTTGTCATACCAGATTATGGTGTTGAAGATCCATTGTCCTATAAACAGGCAATGAATGATGTAGATAAGGACCAATGGGTCAAAGTCATGGACCTTGAAATGGAATCTAGGCATGGGGTTCACTTGTCTAAGGAACAGTGTCCTAAGACACCTCAAGAAGTTGATGATATGATACATATTCCCTATGCCTCAACTGTGGACAGCTTAATGTATGCTATGCTCTGCACTAGGCCAGACATTTGTTATGCAGTGGGAATAGTTAGTAGGTATTAG

Coding sequence (CDS)

ATGCGGCTTGGCTTGGCTTGTACGGATGGATCGGCTCGGTGCGTTTTGCTTACGGTCGGCTTCGATTGGCTCGGTTCGGCTCCAGTTCTTTGTTTGGCGCCAGTTTATGCTGGTTTTGGGCCGGTTCTTCATATTTTATGCTGCATGAATAGTTTGATAGTTCAATTATTAGCTTCCGAAAAACTTAACGGCGATAACTATGCGGCATGGAAATCAAATTTGAACGCAATACTAGTGGTTGATGATTTAAGATTTATCTTAACTGAGGAATGTCCTAAAACCTCTGCCTCAAATGCGTGCCGAGCTAGTCGGAAAGCATATGATCGATGGATAAAAGCAAATGAGAAAGCCCATGTCTACATTCTTGCTAGCATGTCAGATGTTTTAGCAAATGAGTCTCTTCTGAAGAGCTTCATACCATTTCAGACGAATGCATCCCTGAATAAGATAGAGTTTAACTTGACAACCCTTCTGAATGAATTTCAGCTGTTCCAAAATCTTACCAAAGGTAAAGGAAAAGAAGTAGAAGCAAATGTTGCTACTACAAAAGGAAAATTTGAAAGAGGATCGTCCTCTAAGTCTAAAGCTGGACCCTCAAAATCTAATAGAAAGATTGAGAAGAAGGGAAAGGGGAAGACTCCTAAGCAGAACAAGGGTAAGAAGACTGCAGAAAAAGATTTAGGAGCCATTAATCATATTTGTTTCTCATTTCAGGAAACTAGTTCTTGGAAAAGGCTTTTTGAAGGCAAGATCACTCTCAAAGTTGGAACTGGAGAAATGGTCTCAGCTAAAGCAGTGGGAGATTTGAAGTTGATTGGGAGATTGGTTAAGAGTGGACTTCTAAGTCAGTTAGAAGATAACTCTTTACCTCCTTGTGATTCTTGTCTTGAAGGAAAAATGACCAAAAGATCTTTTACTGCAAAAGGTCTTAGAGCCAAAACACCTTTGGAGCTCGTACATTCGGACCTTTGTGGACCAATGAATGCCAAGGCTCGGGGAGGATACGAATATTTCATTAGTTTCATTGATGATTATTCAAGGTATGGTCATGTTTACCTAATTCACAACAAGTCTGATTCTTTTGAAAAGTTCAAAGAATATAAGGCTCAAGTTGAAAATGAATCAGGTAAAACAATAAAGACATTTCAATCAGATCGAGGTGGAGAGTATATGGACTTGCGATTCCAAGACTATTTGATAGAACATGGAATCCAATCACAACTCTCTGTACCTAGTACGCCTCAGCAGAACGGTGAAACTCAACTCATCATATATGATGATGGGATAGAGGATTCATTGACCTATAAACAGGCAATGAATGATGTGGACTGTGACCAATGGATCAAAGCCATGAACCTCGAAATGGAATCTATGTATTCCAATTCTGTCCGGACTTTAGTAGGTCAAACAAATGACGTAAAACCTATTGGTTGTAAATGGATCTACAAGAGAAAACGAGATCAAGCTGGTAAAGTACAAACTTTCAAAGCTCGACTAGTGGCAAAAGGTTATACACAAAAGGAGGGAATAGATTATGAAGAAACTTTCTCTCCTATTGCCATGATAAAGTCGATTAGAATACTCTTATCCGTTGCCACTTTTTATGATTATGAAATTTGGCAGATGGATGTCAAGACAACCTTTTTGAATGGAAATCTTGAGGAGAAACAATGTCCAAAGATACCTCAAGAAGTTGAGGATATGAGTAACATTCCCTATGCTTCTGCTATTGGGAGCCTGATGTATGCAATGTTATGTACTAAACCTGACATTTGCTATTCAGTGGGGATAGTTAGTAGATATCAGTCCAATCTTGGACGTGATCATTGGACAACCGTTAAGAATATTCTAAAATATCCTAGAAGAACAAAAGACTACATGCTTGTGTATGGTTCTAAGGATCTGATCCTTACTGGATACACTGTCTCCGATTTTCAAACTGATAGAGATGCTAGAAAGTCTACATCAGGATCAGTTTTCACTCTGAACGAAGGAGCAGTAGTATGGAGAAGCATAAAACAATCCTGTATTGCTAACTGTGAAGCAGCGAAAGAAGCAATATGGCTTAAAAAGTTCTTAACAGATTTGGAAGTTGTTCCAAATATGTATTTGCCAATCACCTTATACTGTGACAACAGTGTGCAGTTGCAAATTCATGAGAACCTAGAAGTCATAAACGAGGAAAGCACATTAAACGAAAATACCATCTTATCAGGGAAATTTTACATTGAGGAGATGTTACAGTATGATTATTTATACTTAATGGAGCATAAGTCTGAAGCTCTTGAAAAGTTCAAGGAGTATAAGGCTGAAGTTGAAAATCTATTAAGTAAAAAGATTAAAATACTTCGATCTGATCGAGGTGGAGAGTACATGGATTTGAGATTCCAGGATTATATGATAGAACATGGAATCCAATCCCAACTCTCAGCACCTGGTACAGTTCAACAAAATGGTGTATTAGAAAGGAGAAACAGAACCTTGTTAGACATGGTTCATTCAATGATGATTTATGCTCAATTTCCTAGCTCGTTTTGGGGTGGGAGGATTGTATCACAACCTAATCGTTACTTGGGTTTAACTGAAACTCAAGTTGTCATACCAGATTATGGTGTTGAAGATCCATTGTCCTATAAACAGGCAATGAATGATGTAGATAAGGACCAATGGGTCAAAGTCATGGACCTTGAAATGGAATCTAGGCATGGGGTTCACTTGTCTAAGGAACAGTGTCCTAAGACACCTCAAGAAGTTGATGATATGATACATATTCCCTATGCCTCAACTGTGGACAGCTTAATGTATGCTATGCTCTGCACTAGGCCAGACATTTGTTATGCAGTGGGAATAGTTAGTAGGTATTAG

Protein sequence

MRLGLACTDGSARCVLLTVGFDWLGSAPVLCLAPVYAGFGPVLHILCCMNSLIVQLLASEKLNGDNYAAWKSNLNAILVVDDLRFILTEECPKTSASNACRASRKAYDRWIKANEKAHVYILASMSDVLANESLLKSFIPFQTNASLNKIEFNLTTLLNEFQLFQNLTKGKGKEVEANVATTKGKFERGSSSKSKAGPSKSNRKIEKKGKGKTPKQNKGKKTAEKDLGAINHICFSFQETSSWKRLFEGKITLKVGTGEMVSAKAVGDLKLIGRLVKSGLLSQLEDNSLPPCDSCLEGKMTKRSFTAKGLRAKTPLELVHSDLCGPMNAKARGGYEYFISFIDDYSRYGHVYLIHNKSDSFEKFKEYKAQVENESGKTIKTFQSDRGGEYMDLRFQDYLIEHGIQSQLSVPSTPQQNGETQLIIYDDGIEDSLTYKQAMNDVDCDQWIKAMNLEMESMYSNSVRTLVGQTNDVKPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQKEGIDYEETFSPIAMIKSIRILLSVATFYDYEIWQMDVKTTFLNGNLEEKQCPKIPQEVEDMSNIPYASAIGSLMYAMLCTKPDICYSVGIVSRYQSNLGRDHWTTVKNILKYPRRTKDYMLVYGSKDLILTGYTVSDFQTDRDARKSTSGSVFTLNEGAVVWRSIKQSCIANCEAAKEAIWLKKFLTDLEVVPNMYLPITLYCDNSVQLQIHENLEVINEESTLNENTILSGKFYIEEMLQYDYLYLMEHKSEALEKFKEYKAEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTVQQNGVLERRNRTLLDMVHSMMIYAQFPSSFWGGRIVSQPNRYLGLTETQVVIPDYGVEDPLSYKQAMNDVDKDQWVKVMDLEMESRHGVHLSKEQCPKTPQEVDDMIHIPYASTVDSLMYAMLCTRPDICYAVGIVSRY

Homology

[Close]

BLAST of MELO.jh101847.1 vs. NCBI nr
Match: KAA0056341.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 865 bits (2236), Expect = 3.78e-302
Identity = 505/856 (59.00%), Postives = 536/856 (62.62%), Query Frame = 0


Query: 48  CMNSLIVQLLASEKLNGDNYAAWKSNLNAILVVDDLRFILTEECPKTSASNACRASRKAY 107
           C+NSLIVQLLA EKLNGDNYAAWKSNLN ILVVDDLRFILTEECP+  ASN  +ASRKAY
Sbjct: 37  CINSLIVQLLAFEKLNGDNYAAWKSNLNTILVVDDLRFILTEECPQIPASNVNQASRKAY 96

Query: 108 DRWIKANEKAHVYILASMSDVLAN------------------------------------ 167
           DRWIKANEKA VYILASMSDVLA                                     
Sbjct: 97  DRWIKANEKARVYILASMSDVLAKKHESLATAKEIMDSLKGMFRQPEWYLRHEAIKYIYT 156

Query: 168 ----------------------------------------ESLLKSFIPFQTNASLNKIE 227
                                                   ESL KSFIPFQ NASLNKIE
Sbjct: 157 KRMKEGTSVREHVLDMMMHFNIAEVNGGAIDEANQVSFILESLPKSFIPFQMNASLNKIE 216

Query: 228 FNLTTLLNEFQLFQNLTKGKGKEVEANVATTKGKFERGSSSKSKAGPSKSNRKIEKKGKG 287
           FNLTTLLNE Q FQNLTKGKGKEVEANVATTKGKF+RGSSSKSK+ P K N+KIEKK K 
Sbjct: 217 FNLTTLLNELQCFQNLTKGKGKEVEANVATTKGKFKRGSSSKSKSRPLKPNQKIEKKEKW 276

Query: 288 KTPKQNKGKKTAEKDLGAINHICFSFQETSSWKRLFEGKITLKVGTGEMVSAKAVGDLKL 347
           KTPKQ KGKKT EK+  A     +   ETSSWKRL EGKITLKVGTGEMVSAK VGDLKL
Sbjct: 277 KTPKQTKGKKTTEKEKEAEGK--YDLLETSSWKRLSEGKITLKVGTGEMVSAKVVGDLKL 336

Query: 348 -----IGRLVKSGLLSQLEDNSLPPCDSCLEGKMTKRSFTAKGLRAKTPLELVHSDLCGP 407
                IGRLVK+ LL QLEDNSLPPCDSCL+GKMTKRSFT KGLRAK  LELVHSDL G 
Sbjct: 337 FFNDRIGRLVKTELLKQLEDNSLPPCDSCLDGKMTKRSFTRKGLRAKILLELVHSDLYGS 396

Query: 408 MNAKARGGYEYFISFIDDYSRYGHVYLIHNKSDSFEKFKEYKAQVENESGKTIKTFQSDR 467
           MN KARGGY+YFISFI+DY+                                        
Sbjct: 397 MNVKARGGYKYFISFINDYT---------------------------------------- 456

Query: 468 GGEYMDLRFQDYLIEHGIQSQLSVPSTPQQNGETQLIIYDDGIEDSLTYKQAMNDVDCDQ 527
                                           E Q+II DDGIED LTYKQAMNDVDCDQ
Sbjct: 457 -------------------------------SEAQIIIPDDGIEDPLTYKQAMNDVDCDQ 516

Query: 528 WIKAMNLEMESMYSNSVRTLVGQTNDVKPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQ 587
           WIK+M+LEMESMYSNSV TLV Q ++V+PIGCKWIYKRKRDQAGKVQTFKARLVAK YTQ
Sbjct: 517 WIKSMDLEMESMYSNSVWTLVDQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVAKDYTQ 576

Query: 588 KEGIDYEETFSPIAMIKSIRILLSVATFYDYEIWQMDVKTTFLNGNLEE----------- 647
           KEGIDYEETFSP+AMIKSI ILLS+ TFYDYEIWQMDVKT FLNGNLEE           
Sbjct: 577 KEGIDYEETFSPVAMIKSISILLSITTFYDYEIWQMDVKTAFLNGNLEESIYMVQPEGFI 636

Query: 648 ------------------------------------------------------------ 707
                                                                       
Sbjct: 637 QKGKKQKNVDEPCVYKRITNSTIAFLVLYVDDILLIGNEVGHLTDIKEWLATQFQMKDLE 696

Query: 708 ----------------------------KQCPKIPQEVEDMSNIPYASAIGSLMYAMLCT 713
                                       +QCPK PQEVEDMSNIPYASA+GSLMYAMLCT
Sbjct: 697 DAQYVLGIQIVRNRKNKTLAIYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYAMLCT 756

[Close]

BLAST of MELO.jh101847.1 vs. NCBI nr
Match: TYK03174.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 862 bits (2228), Expect = 2.46e-301
Identity = 504/855 (58.95%), Postives = 535/855 (62.57%), Query Frame = 0


Query: 49  MNSLIVQLLASEKLNGDNYAAWKSNLNAILVVDDLRFILTEECPKTSASNACRASRKAYD 108
           +NSLIVQLLA EKLNGDNYAAWKSNLN ILVVDDLRFILTEECP+  ASN  +ASRKAYD
Sbjct: 12  INSLIVQLLAFEKLNGDNYAAWKSNLNTILVVDDLRFILTEECPQIPASNVNQASRKAYD 71

Query: 109 RWIKANEKAHVYILASMSDVLAN------------------------------------- 168
           RWIKANEKA VYILASMSDVLA                                      
Sbjct: 72  RWIKANEKARVYILASMSDVLAKKHESLATAKEIMDSLKGMFRQPEWYLRHEAIKYIYTK 131

Query: 169 ---------------------------------------ESLLKSFIPFQTNASLNKIEF 228
                                                  ESL KSFIPFQ NASLNKIEF
Sbjct: 132 RMKEGTSVREHVLDMMMHFNIAEVNGGAIDEANQVSFILESLPKSFIPFQMNASLNKIEF 191

Query: 229 NLTTLLNEFQLFQNLTKGKGKEVEANVATTKGKFERGSSSKSKAGPSKSNRKIEKKGKGK 288
           NLTTLLNE Q FQNLTKGKGKEVEANVATTKGKF+RGSSSKSK+ P K N+KIEKK K K
Sbjct: 192 NLTTLLNELQCFQNLTKGKGKEVEANVATTKGKFKRGSSSKSKSRPLKPNQKIEKKEKWK 251

Query: 289 TPKQNKGKKTAEKDLGAINHICFSFQETSSWKRLFEGKITLKVGTGEMVSAKAVGDLKL- 348
           TPKQ KGKKT EK+  A     +   ETSSWKRL EGKITLKVGTGEMVSAK VGDLKL 
Sbjct: 252 TPKQTKGKKTTEKEKEAEGK--YDLLETSSWKRLSEGKITLKVGTGEMVSAKVVGDLKLF 311

Query: 349 ----IGRLVKSGLLSQLEDNSLPPCDSCLEGKMTKRSFTAKGLRAKTPLELVHSDLCGPM 408
               IGRLVK+ LL QLEDNSLPPCDSCL+GKMTKRSFT KGLRAK  LELVHSDL G M
Sbjct: 312 FNDRIGRLVKTELLKQLEDNSLPPCDSCLDGKMTKRSFTRKGLRAKILLELVHSDLYGSM 371

Query: 409 NAKARGGYEYFISFIDDYSRYGHVYLIHNKSDSFEKFKEYKAQVENESGKTIKTFQSDRG 468
           N KARGGY+YFISFI+DY+                                         
Sbjct: 372 NVKARGGYKYFISFINDYT----------------------------------------- 431

Query: 469 GEYMDLRFQDYLIEHGIQSQLSVPSTPQQNGETQLIIYDDGIEDSLTYKQAMNDVDCDQW 528
                                          E Q+II DDGIED LTYKQAMNDVDCDQW
Sbjct: 432 ------------------------------SEAQIIIPDDGIEDPLTYKQAMNDVDCDQW 491

Query: 529 IKAMNLEMESMYSNSVRTLVGQTNDVKPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQK 588
           IK+M+LEMESMYSNSV TLV Q ++V+PIGCKWIYKRKRDQAGKVQTFKARLVAK YTQK
Sbjct: 492 IKSMDLEMESMYSNSVWTLVDQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVAKDYTQK 551

Query: 589 EGIDYEETFSPIAMIKSIRILLSVATFYDYEIWQMDVKTTFLNGNLEE------------ 648
           EGIDYEETFSP+AMIKSI ILLS+ TFYDYEIWQMDVKT FLNGNLEE            
Sbjct: 552 EGIDYEETFSPVAMIKSISILLSITTFYDYEIWQMDVKTAFLNGNLEESIYMVQPEGFIQ 611

Query: 649 ------------------------------------------------------------ 708
                                                                       
Sbjct: 612 KGKKQKNVDEPCVYKRITNSTIAFLVLYVDDILLIGNEVGHLTDIKEWLATQFQMKDLED 671

Query: 709 ---------------------------KQCPKIPQEVEDMSNIPYASAIGSLMYAMLCTK 713
                                      +QCPK PQEVEDMSNIPYASA+GSLMYAMLCT+
Sbjct: 672 AQYVLGIQIVRNRKNKTLAIYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYAMLCTR 731

[Close]

BLAST of MELO.jh101847.1 vs. NCBI nr
Match: ADJ18449.1 (gag/pol protein, partial [Bryonia dioica])

HSP 1 Score: 864 bits (2232), Expect = 7.28e-295
Identity = 556/1256 (44.27%), Postives = 609/1256 (48.49%), Query Frame = 0


Query: 49   MNSLIVQLLASEKLNGDNYAAWKSNLNAILVVDDLRFILTEECPKTSASNACRASRKAYD 108
            MN+ IVQLLASEKLNGDNY+AWKSNLN ILVVDDLRF+LTEECP+  A NA R  R+AYD
Sbjct: 1    MNTSIVQLLASEKLNGDNYSAWKSNLNTILVVDDLRFVLTEECPQAPALNANRTVREAYD 60

Query: 109  RWIKANEKAHVYILASMSDVLAN------------------------------------- 168
            RW+KAN+KA VYILASM+DVLA                                      
Sbjct: 61   RWVKANDKARVYILASMTDVLAKKHDSIATAKGIMDSLREMFGQPSWSLRHEAIKHIYTK 120

Query: 169  ---------------------------------------ESLLKSFIPFQTNASLNKIEF 228
                                                   +SL KSF+PFQTNASLNKIEF
Sbjct: 121  RMKEGTSVREHVLDMMMHFNIAEVNGGPIDEANQVSFILQSLPKSFVPFQTNASLNKIEF 180

Query: 229  NLTTLLNEFQLFQNLTKGKGKEVEANVATTKGKFERGSSSKSKAGPSKSNRKIEKKGKGK 288
            NLTTLLNE Q FQNLT  KGKEVEANVA TK KF RGSSSK+K GPSK+   ++KKGKGK
Sbjct: 181  NLTTLLNELQRFQNLTLSKGKEVEANVAVTKRKFIRGSSSKNKVGPSKAQ--MKKKGKGK 240

Query: 289  TPKQNKGKKTAEK----------------------------------------------- 348
             P  +K KK A+K                                               
Sbjct: 241  APNTSKVKKNADKGKCFHCNQDGHWKRNCPKYLAEKKAEKATQGKYDLLVVETCLVECDA 300

Query: 349  -----DLGAINHICFSFQETSSWKRLFEGKITLKVGTGEMVSAKAVGDLKL--------- 408
                 D GA NHICFSFQETSSWK+L EG+ITLKVGTGE+VSA+AVGDL L         
Sbjct: 301  STWILDSGATNHICFSFQETSSWKKLKEGEITLKVGTGEVVSAEAVGDLTLFFQDRYLIL 360

Query: 409  ------------------------------------------------------------ 468
                                                                        
Sbjct: 361  KDVLYVPLMKRNLISIACILEHIYTISFEVNEVFILCKGIQICSAIRENNLYKLRPTRAN 420

Query: 469  --------------------------------------IGRLVKSGLLSQLEDNSLPPCD 528
                                                  I RLVKSG+L+QLEDNSLPPC+
Sbjct: 421  VVLNTEMFRTLETQNKKQKVSSNAYLWHLRLGHINLNRIERLVKSGILNQLEDNSLPPCE 480

Query: 529  SCLEGKMTKRSFTAKGLRAKTPLELVHSDLCGPMNAKARGGYEYFISFIDDYSRYGHVYL 588
            SCLEGKMTKRSFT KGLRAK PLELVHSDLCGPMN KARGGYEYFISFIDD+SRYGHVYL
Sbjct: 481  SCLEGKMTKRSFTGKGLRAKVPLELVHSDLCGPMNVKARGGYEYFISFIDDFSRYGHVYL 540

Query: 589  IHNKSDSFEKFKEYKAQVENESGKTIKTFQSDRGGEYMDLRFQDYLIEHGIQSQLSVPST 648
            +H+KS+SFEKFKEYKA+VENE GKTIKT +SDRGGEYMD +FQDYLIE GIQSQLS PST
Sbjct: 541  LHHKSESFEKFKEYKAEVENEIGKTIKTLRSDRGGEYMDSKFQDYLIEFGIQSQLSAPST 600

Query: 649  PQQNG------------------------------------------------------- 708
            PQQNG                                                       
Sbjct: 601  PQQNGVSERRNRTLLDMVRSMMSYAQLPDSFWGYALETAIHILNNVPSKSVLETPYELWK 660

Query: 709  ------------------------------------------------------------ 713
                                                                        
Sbjct: 661  GRKSSLRYFRIWGCPAHVLVQNPKKLEPRSKLCLFVGYPKESRGGLFYHPQENKVFVSTN 720

[Close]

BLAST of MELO.jh101847.1 vs. NCBI nr
Match: KAA0054839.1 (gag/pol protein [Cucumis melo var. makuwa] >TYK27769.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 795 bits (2054), Expect = 6.73e-277
Identity = 443/636 (69.65%), Postives = 473/636 (74.37%), Query Frame = 0


Query: 132 ESLLKSFIPFQTNASLNKIEFNLTTLLNEFQLFQNLTKGKGKEVEANVATTKGKFERGSS 191
           ESL KSFIPFQTNASLNKIEFNLT LLNE Q FQNLTKGKGKEVEANVATTK KF+RGSS
Sbjct: 16  ESLSKSFIPFQTNASLNKIEFNLTILLNELQRFQNLTKGKGKEVEANVATTKRKFKRGSS 75

Query: 192 SKSKAGPSKSNRKIEKKGKGKTPKQNKGKKTAE--------------------------- 251
           SKSK GPSKSNRKIEKKGKGKTPKQNKGKKTAE                           
Sbjct: 76  SKSKVGPSKSNRKIEKKGKGKTPKQNKGKKTAEEGKCYHCGKNGHWLRNCPKYLARKKAE 135

Query: 252 -KDLGAINHICFSFQETSSWKRLFEGKITLKVGTGEMVSAKAVGDLKL------------ 311
            K+ G  + +   F ETSSWK L EG+ITLKVGTGEMVSAKAVGDLKL            
Sbjct: 136 KKEQGKCDLL---FLETSSWKMLSEGEITLKVGTGEMVSAKAVGDLKLFFNDRYIILKNV 195

Query: 312 -IGRLVKSGLLSQLEDNSLPPCDSCLEGKMTKRSFTAKGLRAKTPLELVHSDLCGPMNAK 371
            IGRLVKSGLLSQLEDNSLP CDSCLEGKMTKRSF  KGLRAK PL LVHSDLCGPMN K
Sbjct: 196 LIGRLVKSGLLSQLEDNSLPLCDSCLEGKMTKRSFIGKGLRAKMPLGLVHSDLCGPMNVK 255

Query: 372 ARGGYEYFISFIDDYSRYGHVYLIHNKSDSFEKFKEYKAQVENESGKTIKTFQSDRGGEY 431
           A GGYEYFI+FIDDYSRYGHVYLI NK DSFEKFKEYKA+VENES   +           
Sbjct: 256 AWGGYEYFITFIDDYSRYGHVYLIQNKFDSFEKFKEYKAEVENESETAV----------- 315

Query: 432 MDLRFQDYLIEHGIQSQLS-VPSTPQQNGETQLIIYDDGIEDSLTYKQAMNDVDCDQWIK 491
                  Y++ +    ++S  P    +  + Q+II DDGIED LTY+QAMNDVDCDQWIK
Sbjct: 316 -------YILNNIPSKRVSETPYELWKGRKAQIIIPDDGIEDPLTYEQAMNDVDCDQWIK 375

Query: 492 AMNLEMESMYSNSVRTLVGQTNDVKPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQKEG 551
           +M+LEMESMYSNSV TLV Q NDVKPIGCKWIYKRKRDQAGK QTFKARLVA GYTQKEG
Sbjct: 376 SMDLEMESMYSNSVWTLVEQPNDVKPIGCKWIYKRKRDQAGKTQTFKARLVANGYTQKEG 435

Query: 552 IDYEETFSPIAMIKSIRILLSVATFYDYEIWQMDVKTTFLNG------------NLEEKQ 611
           IDYEETFSP+AMIKSIRILLS+ATFYDYEIWQMDVKT FLN             +L ++Q
Sbjct: 436 IDYEETFSPVAMIKSIRILLSIATFYDYEIWQMDVKTAFLNEFQKGSVAVKYGIHLSKEQ 495

Query: 612 CPKIPQEVEDMSNIPYASAIGSLMYAMLCTKPDICYSVGIVSRYQSNLGRDHWTTVKNIL 671
           CP  PQ+V+DMSNI YAS +GSLMYAMLCT+PDICYSVGIVSRYQS+  RDHW  VKNIL
Sbjct: 496 CPTTPQKVKDMSNISYASTVGSLMYAMLCTRPDICYSVGIVSRYQSSPRRDHWKVVKNIL 555

Query: 672 KYPRRTKDYMLVYGSKDLILTGYTVSDFQTDRDARKSTSGSVFTLNEGAVVWRSIKQSCI 713
           KY RR KDYMLVYGSKDLILTGYT SDFQTD+D RK T GSVFTLN GAV          
Sbjct: 556 KYLRRRKDYMLVYGSKDLILTGYTDSDFQTDKDVRKFTLGSVFTLNGGAV---------- 606

[Close]

BLAST of MELO.jh101847.1 vs. NCBI nr
Match: KAA0032972.1 (gag/pol protein [Cucumis melo var. makuwa] >TYK21997.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 742 bits (1916), Expect = 1.23e-253
Identity = 445/791 (56.26%), Postives = 514/791 (64.98%), Query Frame = 0


Query: 49  MNSLIVQLLASEKLNGDNYAAWKSNLNAILVVDDLRFILTEECPKTSASNACRASRKAYD 108
           MNS IVQLLAS+KLNGDNYAAWKSNLN ILVVD L F+LTEECP+T +SNA RASRKAYD
Sbjct: 1   MNSSIVQLLASKKLNGDNYAAWKSNLNTILVVDGLSFVLTEECPQTPSSNANRASRKAYD 60

Query: 109 RWIKANEKAHVYILASMSDVLA--NESLLKS------------------------FIPFQ 168
           RWIK NEKAHVYILASM DVLA  +ESL  +                        +I  +
Sbjct: 61  RWIKVNEKAHVYILASMLDVLAKKHESLATAKEIMDSLKGMFGQPKWSLRHEAIKYIYTK 120

Query: 169 TNASLNKIEFNLTTLLNEFQLF-----------QNLTKGKGKEVEANVATTKGKFERGSS 228
                  +  ++  ++  F +            QNLTK KGKEVEANVATTKGKF+RGSS
Sbjct: 121 RMKEGTSVREHVMDMMMHFNIAEVNRGAIDEANQNLTKSKGKEVEANVATTKGKFKRGSS 180

Query: 229 SKSKAGPSKSNRKIEKKGKGKTPKQNKGKKTAEKDLGAINHICFSFQETSSWKRLFEGKI 288
           S+SK GP K NRKIEKK KGKT K+NK                    ETSS KRL +G I
Sbjct: 181 SRSKTGPLKPNRKIEKKEKGKTSKRNK--------------------ETSSSKRLSKGGI 240

Query: 289 TLKVGTGEMVSAKAVGDLKL-------------IGRLVKSGLLSQLEDNSLPPCDSCLEG 348
           TLKVGTGEMVSAKAVGDLKL             I RLVK  LL+QLEDNSLPPCD CL+G
Sbjct: 241 TLKVGTGEMVSAKAVGDLKLFCNDRYILLKNVLIERLVKIRLLNQLEDNSLPPCDFCLKG 300

Query: 349 KMTKRSFTAKGLRAKTPLELVHSDLCGPMNAKARGGYEYFISFIDDYSRYGHVYLIHNKS 408
           KMTK SF  KGLRAKTPLELVHS+LCGPMN KA+GGYEYFISFIDDYSRYGHVYLIHNKS
Sbjct: 301 KMTKISFAGKGLRAKTPLELVHSNLCGPMNVKAQGGYEYFISFIDDYSRYGHVYLIHNKS 360

Query: 409 DSFEKFKEYKAQVENESGKTIKTFQSDRGGEYMD--------LRFQDYLIEHGIQS---- 468
           DSFEKFK+YKA+VENESG +    +  RGG + D        L    +L E  I++    
Sbjct: 361 DSFEKFKKYKAEVENESGYS----KESRGGLFYDPQENKVFVLTNATFLEEDHIRNDPTR 420

Query: 469 ------QLSVPST---------------------------PQQNG-------------ET 528
                 ++S  ST                           P+++G             E 
Sbjct: 421 SKLILEEISKNSTDRPSSSTKVVDKTRNIGQTHASQELEEPRRSGRVIRQPDRYLGLSEA 480

Query: 529 QLIIYDDGIEDSLTYKQAMNDVDCDQWIKAMNLEMESMYSNSVRTLVGQTNDVKPIGCKW 588
           Q+II DDGIED L +K+ MNDVD DQWIK+M+L+MESMYSN V TLV Q NDV+ IGCKW
Sbjct: 481 QIIIPDDGIEDPLAFKKVMNDVDSDQWIKSMDLKMESMYSNFVWTLVDQPNDVRSIGCKW 540

Query: 589 IYKRKRDQAGKVQTFKARLVAKGYTQKEG-IDYEETFSPIAMIKSIRILLSVATFYDYEI 648
           IYKRK+DQAG +   K  L  +   +  G   Y      +   K+  + +S  ++ D  +
Sbjct: 541 IYKRKQDQAGYLIDIKEWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLAMSYTSYIDKML 600

Query: 649 WQMDVKTTFLNG-------NLEEKQCPKIPQEVEDMSNIPYASAIGSLMYAMLCTKPDIC 708
            +  ++ + +         +L ++QCPK PQEVEDMSNIPYAS + SLMY MLCT+PDI 
Sbjct: 601 SRYKMQNSKMGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASVVESLMYVMLCTRPDIF 660

Query: 709 YSVGIVSRYQSNLGRDHWTTVKNILKYPRRTKDYMLVYGSKDLILTGYTVSDFQTDRDAR 713
           YSVGIVS+YQSNLGRDHWTTVKNILKY RR KDYMLVY SKDLILTGYT SDFQ D+DAR
Sbjct: 661 YSVGIVSKYQSNLGRDHWTTVKNILKYFRRKKDYMLVYCSKDLILTGYTDSDFQIDKDAR 720

[Close]

BLAST of MELO.jh101847.1 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 4.3e-61
Identity = 201/830 (24.22%), Postives = 294/830 (35.42%), Query Frame = 0


Query: 275  LVKSGLLSQLEDNSLPPCDSCLEGKMTKRSFTAKGLRAKTPLELVHSDLCGPMNAKARGG 334
            L K  L+S  +  ++ PCD CL GK  + SF     R    L+LV+SD+CGPM  ++ GG
Sbjct: 440  LAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSSERKLNILDLVYSDVCGPMEIESMGG 499

Query: 335  YEYFISFIDDYSRYGHVYLIHNKSDSFEKFKEYKAQVENESGKTIKTFQSDRGGEYMDLR 394
             +YF++FIDD SR   VY++  K   F+ F+++ A VE E+G+ +K  +SD GGEY    
Sbjct: 500  NKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGRKLKRLRSDNGGEYTSRE 559

Query: 395  FQDYLIEHGIQSQLSVPSTPQQNG------------------------------------ 454
            F++Y   HGI+ + +VP TPQ NG                                    
Sbjct: 560  FEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACY 619

Query: 455  --------------------------------------------ETQL------------ 514
                                                         T+L            
Sbjct: 620  LINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGY 679

Query: 515  ----------------------IIY----------------------------------- 574
                                  +++                                   
Sbjct: 680  GDEEFGYRLWDPVKKKVIRSRDVVFRESEVRTAADMSEKVKNGIIPNFVTIPSTSNNPTS 739

Query: 575  -------------------------DDGIED----------------------------S 634
                                     D+G+E+                            S
Sbjct: 740  AESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEHPTQGEEQHQPLRRSERPRVESRRYPS 799

Query: 635  LTY------------KQAMNDVDCDQWIKAMNLEMESMYSNSVRTLVGQTNDVKPIGCKW 694
              Y            K+ ++  + +Q +KAM  EMES+  N    LV      +P+ CKW
Sbjct: 800  TEYVLISDDREPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKW 859

Query: 695  IYKRKRDQAGKVQTFKARLVAKGYTQKEGIDYEETFSPIAMIKSIRILLSVATFYDYEIW 722
            ++K K+D   K+  +KARLV KG+ QK+GID++E FSP+  + SIR +LS+A   D E+ 
Sbjct: 860  VFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVE 919

[Close]

BLAST of MELO.jh101847.1 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 129.4 bits (324), Expect = 2.1e-28
Identity = 109/443 (24.60%), Postives = 169/443 (38.15%), Query Frame = 0


Query: 443  DCDQWIKAMNLEMESMYSNSVRTLVGQTNDVKPIGCKWIYKRKRDQAGKVQTFKARLVAK 502
            D   W +A+N E+ +   N+  T+  +  +   +  +W++  K ++ G    +KARLVA+
Sbjct: 902  DKSSWEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVAR 961

Query: 503  GYTQKEGIDYEETFSPIAMIKSIRILLSVATFYDYEIWQMDVKTTFLNGNLEEKQCPKIP 562
            G+TQK  IDYEETF+P+A I S R +LS+   Y+ ++ QMDVKT FLNG L+E+   ++P
Sbjct: 962  GFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLP 1021

Query: 563  QEVE-------------------------------------------------------- 622
            Q +                                                         
Sbjct: 1022 QGISCNSDNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINEN 1081

Query: 623  ---------------DMS------------------------------------------ 682
                           DM+                                          
Sbjct: 1082 IYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSA 1141

Query: 683  ------------------------------------NIPYASAIGSLMYAMLCTKPDICY 722
                                                N P  S IG LMY MLCT+PD+  
Sbjct: 1142 YVKKILSKFNMENCNAVSTPLPSKINYELLNSDEDCNTPCRSLIGCLMYIMLCTRPDLTT 1201

HSP 2 Score: 91.3 bits (225), Expect = 6.5e-17
Identity = 54/149 (36.24%), Postives = 79/149 (53.02%), Query Frame = 0


Query: 280 LLSQLEDNSLPPCDSCLEGKMTKRSFTAKGLRAKT----PLELVHSDLCGPMNAKARGGY 339
           LL+ LE  S   C+ CL GK  +  F  K L+ KT    PL +VHSD+CGP+        
Sbjct: 444 LLNNLE-LSCEICEPCLNGKQARLPF--KQLKDKTHIKRPLFVVHSDVCGPITPVTLDDK 503

Query: 340 EYFISFIDDYSRYGHVYLIHNKSDSFEKFKEYKAQVENESGKTIKTFQSDRGGEYMDLRF 399
            YF+ F+D ++ Y   YLI  KSD F  F+++ A+ E      +     D G EY+    
Sbjct: 504 NYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEM 563

Query: 400 QDYLIEHGIQSQLSVPSTPQQNGETQLII 425
           + + ++ GI   L+VP TPQ NG ++ +I
Sbjct: 564 RQFCVKKGISYHLTVPHTPQLNGVSERMI 589

[Close]

BLAST of MELO.jh101847.1 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 4.8e-20
Identity = 110/484 (22.73%), Postives = 165/484 (34.09%), Query Frame = 0


Query: 437  QAMNDVDCDQWIKAMNLEMESMYSNSVRTLV-GQTNDVKPIGCKWIYKRKRDQAGKVQTF 496
            QAM D   D+W +AM  E+ +   N    LV      V  +GC+WI+ +K +  G +  +
Sbjct: 944  QAMKD---DRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSLNRY 1003

Query: 497  KARLVAKGYTQKEGIDYEETFSPIAMIKSIRILLSVATFYDYEIWQMDVKTTFLNGNLEE 556
            KARLVAKGY Q+ G+DY ETFSP+    SIRI+L VA    + I Q+DV   FL G L +
Sbjct: 1004 KARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTD 1063

Query: 557  -----------------------------KQCP--------------------------- 616
                                         KQ P                           
Sbjct: 1064 EVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLFV 1123

Query: 617  -------------------------------------------------------KIPQE 676
                                                                   ++PQ 
Sbjct: 1124 LQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQG 1183

Query: 677  VE------------------------DMSNIP---------------YASAIGSLMYAML 736
            +                          M+  P               Y   +GSL Y + 
Sbjct: 1184 LHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQY-LA 1243

Query: 737  CTKPDICYSVGIVSRYQSNLGRDHWTTVKNILKYPRRTKDY-MLVYGSKDLILTGYTVSD 753
             T+PD+ Y+V  +S+Y      DHW  +K +L+Y   T D+ + +     L L  Y+ +D
Sbjct: 1244 FTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDAD 1303

HSP 2 Score: 79.3 bits (194), Expect = 2.5e-13
Identity = 46/132 (34.85%), Postives = 68/132 (51.52%), Query Frame = 0


Query: 287 NSLPPCDSCLEGKMTKRSFTAKGLRAKTPLELVHSDLCGPMNAKARGGYEYFISFIDDYS 346
           + L  C  C   K  K  F+   + +  PLE ++SD+       +   Y Y++ F+D ++
Sbjct: 474 HKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVWS-SPILSIDNYRYYVIFVDHFT 533

Query: 347 RYGHVYLIHNKSDSFEKFKEYKAQVENESGKTIKTFQSDRGGEYMDLRFQDYLIEHGIQS 406
           RY  +Y +  KS   + F  +K+ VEN     I T  SD GGE++ LR  DYL +HGI  
Sbjct: 534 RYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFVVLR--DYLSQHGISH 593

Query: 407 QLSVPSTPQQNG 419
             S P TP+ NG
Sbjct: 594 FTSPPHTPEHNG 602

[Close]

BLAST of MELO.jh101847.1 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 8.2e-20
Identity = 52/133 (39.10%), Postives = 81/133 (60.90%), Query Frame = 0


Query: 568 MSNIPYASAIGSLMYAMLCTKPDICYSVGIVSRYQSNLGRDHWTTVKNILKYPRRTKDYM 627
           M N+PY SA+G++MY M+ T+PD+  +VG++S++ S+    HW  +K +L+Y + T+ Y 
Sbjct: 1   MKNVPYLSAVGAIMYLMVVTRPDLAAAVGVLSQFASDPCPTHWQALKRVLRYLQSTQTYG 60

Query: 628 LVYGSKDLI-LTGYTVSDFQTDRDARKSTSGSVFTLNEGAVVWRSIKQSCI--------- 687
           L +       L GY+ +D+  D ++R+STSG +F LN G V WRS KQ  +         
Sbjct: 61  LEFTRAGTAKLVGYSDADWAGDVESRRSTSGYLFKLNGGCVSWRSKKQRTVALSSTEDEY 120

Query: 688 -ANCEAAKEAIWL 690
            A  EA +EA+WL
Sbjct: 121 MALSEATQEAVWL 133

[Close]

BLAST of MELO.jh101847.1 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 9.0e-19
Identity = 68/205 (33.17%), Postives = 101/205 (49.27%), Query Frame = 0


Query: 437  QAMNDVDCDQWIKAMNLEMESMYSNSVRTLV-GQTNDVKPIGCKWIYKRKRDQAGKVQTF 496
            QA+ D   ++W  AM  E+ +   N    LV    + V  +GC+WI+ +K +  G +  +
Sbjct: 961  QALKD---ERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRY 1020

Query: 497  KARLVAKGYTQKEGIDYEETFSPIAMIKSIRILLSVATFYDYEIWQMDVKTTFLNGNLEE 556
            KARLVAKGY Q+ G+DY ETFSP+    SIRI+L VA    + I Q+DV   FL G L +
Sbjct: 1021 KARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTD 1080

Query: 557  KQCPKIPQEVEDMSNIPYASAIGSLMYAMLCTKPDICYSVGIVSRYQSNLGRDHWTTVKN 616
                  P    D     Y   +   +Y  L   P   Y    +  Y   +G  +  +  +
Sbjct: 1081 DVYMSQPPGFIDKDRPNYVCKLRKALYG-LKQAPRAWYVE--LRNYLLTIGFVNSVSDTS 1140

Query: 617  ILKYPR-RTKDYMLVYGSKDLILTG 640
            +    R ++  YMLVY   D+++TG
Sbjct: 1141 LFVLQRGKSIVYMLVY-VDDILITG 1158

HSP 2 Score: 79.3 bits (194), Expect = 2.5e-13
Identity = 44/127 (34.65%), Postives = 65/127 (51.18%), Query Frame = 0


Query: 292 CDSCLEGKMTKRSFTAKGLRAKTPLELVHSDLCGPMNAKARGGYEYFISFIDDYSRYGHV 351
           C  CL  K  K  F+   + +  PLE ++SD+       +   Y Y++ F+D ++RY  +
Sbjct: 500 CSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWS-SPILSHDNYRYYVIFVDHFTRYTWL 559

Query: 352 YLIHNKSDSFEKFKEYKAQVENESGKTIKTFQSDRGGEYMDLRFQDYLIEHGIQSQLSVP 411
           Y +  KS   E F  +K  +EN     I TF SD GGE++ L   +Y  +HGI    S P
Sbjct: 560 YPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEFVAL--WEYFSQHGISHLTSPP 619

Query: 412 STPQQNG 419
            TP+ NG
Sbjct: 620 HTPEHNG 623

[Close]

BLAST of MELO.jh101847.1 vs. ExPASy TrEMBL
Match: A0A5A7US12 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold186G00330 PE=4 SV=1)

HSP 1 Score: 865 bits (2236), Expect = 1.83e-302
Identity = 505/856 (59.00%), Postives = 536/856 (62.62%), Query Frame = 0


Query: 48  CMNSLIVQLLASEKLNGDNYAAWKSNLNAILVVDDLRFILTEECPKTSASNACRASRKAY 107
           C+NSLIVQLLA EKLNGDNYAAWKSNLN ILVVDDLRFILTEECP+  ASN  +ASRKAY
Sbjct: 37  CINSLIVQLLAFEKLNGDNYAAWKSNLNTILVVDDLRFILTEECPQIPASNVNQASRKAY 96

Query: 108 DRWIKANEKAHVYILASMSDVLAN------------------------------------ 167
           DRWIKANEKA VYILASMSDVLA                                     
Sbjct: 97  DRWIKANEKARVYILASMSDVLAKKHESLATAKEIMDSLKGMFRQPEWYLRHEAIKYIYT 156

Query: 168 ----------------------------------------ESLLKSFIPFQTNASLNKIE 227
                                                   ESL KSFIPFQ NASLNKIE
Sbjct: 157 KRMKEGTSVREHVLDMMMHFNIAEVNGGAIDEANQVSFILESLPKSFIPFQMNASLNKIE 216

Query: 228 FNLTTLLNEFQLFQNLTKGKGKEVEANVATTKGKFERGSSSKSKAGPSKSNRKIEKKGKG 287
           FNLTTLLNE Q FQNLTKGKGKEVEANVATTKGKF+RGSSSKSK+ P K N+KIEKK K 
Sbjct: 217 FNLTTLLNELQCFQNLTKGKGKEVEANVATTKGKFKRGSSSKSKSRPLKPNQKIEKKEKW 276

Query: 288 KTPKQNKGKKTAEKDLGAINHICFSFQETSSWKRLFEGKITLKVGTGEMVSAKAVGDLKL 347
           KTPKQ KGKKT EK+  A     +   ETSSWKRL EGKITLKVGTGEMVSAK VGDLKL
Sbjct: 277 KTPKQTKGKKTTEKEKEAEGK--YDLLETSSWKRLSEGKITLKVGTGEMVSAKVVGDLKL 336

Query: 348 -----IGRLVKSGLLSQLEDNSLPPCDSCLEGKMTKRSFTAKGLRAKTPLELVHSDLCGP 407
                IGRLVK+ LL QLEDNSLPPCDSCL+GKMTKRSFT KGLRAK  LELVHSDL G 
Sbjct: 337 FFNDRIGRLVKTELLKQLEDNSLPPCDSCLDGKMTKRSFTRKGLRAKILLELVHSDLYGS 396

Query: 408 MNAKARGGYEYFISFIDDYSRYGHVYLIHNKSDSFEKFKEYKAQVENESGKTIKTFQSDR 467
           MN KARGGY+YFISFI+DY+                                        
Sbjct: 397 MNVKARGGYKYFISFINDYT---------------------------------------- 456

Query: 468 GGEYMDLRFQDYLIEHGIQSQLSVPSTPQQNGETQLIIYDDGIEDSLTYKQAMNDVDCDQ 527
                                           E Q+II DDGIED LTYKQAMNDVDCDQ
Sbjct: 457 -------------------------------SEAQIIIPDDGIEDPLTYKQAMNDVDCDQ 516

Query: 528 WIKAMNLEMESMYSNSVRTLVGQTNDVKPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQ 587
           WIK+M+LEMESMYSNSV TLV Q ++V+PIGCKWIYKRKRDQAGKVQTFKARLVAK YTQ
Sbjct: 517 WIKSMDLEMESMYSNSVWTLVDQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVAKDYTQ 576

Query: 588 KEGIDYEETFSPIAMIKSIRILLSVATFYDYEIWQMDVKTTFLNGNLEE----------- 647
           KEGIDYEETFSP+AMIKSI ILLS+ TFYDYEIWQMDVKT FLNGNLEE           
Sbjct: 577 KEGIDYEETFSPVAMIKSISILLSITTFYDYEIWQMDVKTAFLNGNLEESIYMVQPEGFI 636

Query: 648 ------------------------------------------------------------ 707
                                                                       
Sbjct: 637 QKGKKQKNVDEPCVYKRITNSTIAFLVLYVDDILLIGNEVGHLTDIKEWLATQFQMKDLE 696

Query: 708 ----------------------------KQCPKIPQEVEDMSNIPYASAIGSLMYAMLCT 713
                                       +QCPK PQEVEDMSNIPYASA+GSLMYAMLCT
Sbjct: 697 DAQYVLGIQIVRNRKNKTLAIYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYAMLCT 756

[Close]

BLAST of MELO.jh101847.1 vs. ExPASy TrEMBL
Match: A0A5D3BVG4 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11G00790 PE=4 SV=1)

HSP 1 Score: 862 bits (2228), Expect = 1.19e-301
Identity = 504/855 (58.95%), Postives = 535/855 (62.57%), Query Frame = 0


Query: 49  MNSLIVQLLASEKLNGDNYAAWKSNLNAILVVDDLRFILTEECPKTSASNACRASRKAYD 108
           +NSLIVQLLA EKLNGDNYAAWKSNLN ILVVDDLRFILTEECP+  ASN  +ASRKAYD
Sbjct: 12  INSLIVQLLAFEKLNGDNYAAWKSNLNTILVVDDLRFILTEECPQIPASNVNQASRKAYD 71

Query: 109 RWIKANEKAHVYILASMSDVLAN------------------------------------- 168
           RWIKANEKA VYILASMSDVLA                                      
Sbjct: 72  RWIKANEKARVYILASMSDVLAKKHESLATAKEIMDSLKGMFRQPEWYLRHEAIKYIYTK 131

Query: 169 ---------------------------------------ESLLKSFIPFQTNASLNKIEF 228
                                                  ESL KSFIPFQ NASLNKIEF
Sbjct: 132 RMKEGTSVREHVLDMMMHFNIAEVNGGAIDEANQVSFILESLPKSFIPFQMNASLNKIEF 191

Query: 229 NLTTLLNEFQLFQNLTKGKGKEVEANVATTKGKFERGSSSKSKAGPSKSNRKIEKKGKGK 288
           NLTTLLNE Q FQNLTKGKGKEVEANVATTKGKF+RGSSSKSK+ P K N+KIEKK K K
Sbjct: 192 NLTTLLNELQCFQNLTKGKGKEVEANVATTKGKFKRGSSSKSKSRPLKPNQKIEKKEKWK 251

Query: 289 TPKQNKGKKTAEKDLGAINHICFSFQETSSWKRLFEGKITLKVGTGEMVSAKAVGDLKL- 348
           TPKQ KGKKT EK+  A     +   ETSSWKRL EGKITLKVGTGEMVSAK VGDLKL 
Sbjct: 252 TPKQTKGKKTTEKEKEAEGK--YDLLETSSWKRLSEGKITLKVGTGEMVSAKVVGDLKLF 311

Query: 349 ----IGRLVKSGLLSQLEDNSLPPCDSCLEGKMTKRSFTAKGLRAKTPLELVHSDLCGPM 408
               IGRLVK+ LL QLEDNSLPPCDSCL+GKMTKRSFT KGLRAK  LELVHSDL G M
Sbjct: 312 FNDRIGRLVKTELLKQLEDNSLPPCDSCLDGKMTKRSFTRKGLRAKILLELVHSDLYGSM 371

Query: 409 NAKARGGYEYFISFIDDYSRYGHVYLIHNKSDSFEKFKEYKAQVENESGKTIKTFQSDRG 468
           N KARGGY+YFISFI+DY+                                         
Sbjct: 372 NVKARGGYKYFISFINDYT----------------------------------------- 431

Query: 469 GEYMDLRFQDYLIEHGIQSQLSVPSTPQQNGETQLIIYDDGIEDSLTYKQAMNDVDCDQW 528
                                          E Q+II DDGIED LTYKQAMNDVDCDQW
Sbjct: 432 ------------------------------SEAQIIIPDDGIEDPLTYKQAMNDVDCDQW 491

Query: 529 IKAMNLEMESMYSNSVRTLVGQTNDVKPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQK 588
           IK+M+LEMESMYSNSV TLV Q ++V+PIGCKWIYKRKRDQAGKVQTFKARLVAK YTQK
Sbjct: 492 IKSMDLEMESMYSNSVWTLVDQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVAKDYTQK 551

Query: 589 EGIDYEETFSPIAMIKSIRILLSVATFYDYEIWQMDVKTTFLNGNLEE------------ 648
           EGIDYEETFSP+AMIKSI ILLS+ TFYDYEIWQMDVKT FLNGNLEE            
Sbjct: 552 EGIDYEETFSPVAMIKSISILLSITTFYDYEIWQMDVKTAFLNGNLEESIYMVQPEGFIQ 611

Query: 649 ------------------------------------------------------------ 708
                                                                       
Sbjct: 612 KGKKQKNVDEPCVYKRITNSTIAFLVLYVDDILLIGNEVGHLTDIKEWLATQFQMKDLED 671

Query: 709 ---------------------------KQCPKIPQEVEDMSNIPYASAIGSLMYAMLCTK 713
                                      +QCPK PQEVEDMSNIPYASA+GSLMYAMLCT+
Sbjct: 672 AQYVLGIQIVRNRKNKTLAIYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYAMLCTR 731

[Close]

BLAST of MELO.jh101847.1 vs. ExPASy TrEMBL
Match: E2GK51 (Gag/pol protein (Fragment) OS=Bryonia dioica OX=3652 PE=4 SV=1)

HSP 1 Score: 864 bits (2232), Expect = 3.53e-295
Identity = 556/1256 (44.27%), Postives = 609/1256 (48.49%), Query Frame = 0


Query: 49   MNSLIVQLLASEKLNGDNYAAWKSNLNAILVVDDLRFILTEECPKTSASNACRASRKAYD 108
            MN+ IVQLLASEKLNGDNY+AWKSNLN ILVVDDLRF+LTEECP+  A NA R  R+AYD
Sbjct: 1    MNTSIVQLLASEKLNGDNYSAWKSNLNTILVVDDLRFVLTEECPQAPALNANRTVREAYD 60

Query: 109  RWIKANEKAHVYILASMSDVLAN------------------------------------- 168
            RW+KAN+KA VYILASM+DVLA                                      
Sbjct: 61   RWVKANDKARVYILASMTDVLAKKHDSIATAKGIMDSLREMFGQPSWSLRHEAIKHIYTK 120

Query: 169  ---------------------------------------ESLLKSFIPFQTNASLNKIEF 228
                                                   +SL KSF+PFQTNASLNKIEF
Sbjct: 121  RMKEGTSVREHVLDMMMHFNIAEVNGGPIDEANQVSFILQSLPKSFVPFQTNASLNKIEF 180

Query: 229  NLTTLLNEFQLFQNLTKGKGKEVEANVATTKGKFERGSSSKSKAGPSKSNRKIEKKGKGK 288
            NLTTLLNE Q FQNLT  KGKEVEANVA TK KF RGSSSK+K GPSK+   ++KKGKGK
Sbjct: 181  NLTTLLNELQRFQNLTLSKGKEVEANVAVTKRKFIRGSSSKNKVGPSKAQ--MKKKGKGK 240

Query: 289  TPKQNKGKKTAEK----------------------------------------------- 348
             P  +K KK A+K                                               
Sbjct: 241  APNTSKVKKNADKGKCFHCNQDGHWKRNCPKYLAEKKAEKATQGKYDLLVVETCLVECDA 300

Query: 349  -----DLGAINHICFSFQETSSWKRLFEGKITLKVGTGEMVSAKAVGDLKL--------- 408
                 D GA NHICFSFQETSSWK+L EG+ITLKVGTGE+VSA+AVGDL L         
Sbjct: 301  STWILDSGATNHICFSFQETSSWKKLKEGEITLKVGTGEVVSAEAVGDLTLFFQDRYLIL 360

Query: 409  ------------------------------------------------------------ 468
                                                                        
Sbjct: 361  KDVLYVPLMKRNLISIACILEHIYTISFEVNEVFILCKGIQICSAIRENNLYKLRPTRAN 420

Query: 469  --------------------------------------IGRLVKSGLLSQLEDNSLPPCD 528
                                                  I RLVKSG+L+QLEDNSLPPC+
Sbjct: 421  VVLNTEMFRTLETQNKKQKVSSNAYLWHLRLGHINLNRIERLVKSGILNQLEDNSLPPCE 480

Query: 529  SCLEGKMTKRSFTAKGLRAKTPLELVHSDLCGPMNAKARGGYEYFISFIDDYSRYGHVYL 588
            SCLEGKMTKRSFT KGLRAK PLELVHSDLCGPMN KARGGYEYFISFIDD+SRYGHVYL
Sbjct: 481  SCLEGKMTKRSFTGKGLRAKVPLELVHSDLCGPMNVKARGGYEYFISFIDDFSRYGHVYL 540

Query: 589  IHNKSDSFEKFKEYKAQVENESGKTIKTFQSDRGGEYMDLRFQDYLIEHGIQSQLSVPST 648
            +H+KS+SFEKFKEYKA+VENE GKTIKT +SDRGGEYMD +FQDYLIE GIQSQLS PST
Sbjct: 541  LHHKSESFEKFKEYKAEVENEIGKTIKTLRSDRGGEYMDSKFQDYLIEFGIQSQLSAPST 600

Query: 649  PQQNG------------------------------------------------------- 708
            PQQNG                                                       
Sbjct: 601  PQQNGVSERRNRTLLDMVRSMMSYAQLPDSFWGYALETAIHILNNVPSKSVLETPYELWK 660

Query: 709  ------------------------------------------------------------ 713
                                                                        
Sbjct: 661  GRKSSLRYFRIWGCPAHVLVQNPKKLEPRSKLCLFVGYPKESRGGLFYHPQENKVFVSTN 720

[Close]

BLAST of MELO.jh101847.1 vs. ExPASy TrEMBL
Match: A0A5D3DWF1 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1142G00340 PE=4 SV=1)

HSP 1 Score: 795 bits (2054), Expect = 3.26e-277
Identity = 443/636 (69.65%), Postives = 473/636 (74.37%), Query Frame = 0


Query: 132 ESLLKSFIPFQTNASLNKIEFNLTTLLNEFQLFQNLTKGKGKEVEANVATTKGKFERGSS 191
           ESL KSFIPFQTNASLNKIEFNLT LLNE Q FQNLTKGKGKEVEANVATTK KF+RGSS
Sbjct: 16  ESLSKSFIPFQTNASLNKIEFNLTILLNELQRFQNLTKGKGKEVEANVATTKRKFKRGSS 75

Query: 192 SKSKAGPSKSNRKIEKKGKGKTPKQNKGKKTAE--------------------------- 251
           SKSK GPSKSNRKIEKKGKGKTPKQNKGKKTAE                           
Sbjct: 76  SKSKVGPSKSNRKIEKKGKGKTPKQNKGKKTAEEGKCYHCGKNGHWLRNCPKYLARKKAE 135

Query: 252 -KDLGAINHICFSFQETSSWKRLFEGKITLKVGTGEMVSAKAVGDLKL------------ 311
            K+ G  + +   F ETSSWK L EG+ITLKVGTGEMVSAKAVGDLKL            
Sbjct: 136 KKEQGKCDLL---FLETSSWKMLSEGEITLKVGTGEMVSAKAVGDLKLFFNDRYIILKNV 195

Query: 312 -IGRLVKSGLLSQLEDNSLPPCDSCLEGKMTKRSFTAKGLRAKTPLELVHSDLCGPMNAK 371
            IGRLVKSGLLSQLEDNSLP CDSCLEGKMTKRSF  KGLRAK PL LVHSDLCGPMN K
Sbjct: 196 LIGRLVKSGLLSQLEDNSLPLCDSCLEGKMTKRSFIGKGLRAKMPLGLVHSDLCGPMNVK 255

Query: 372 ARGGYEYFISFIDDYSRYGHVYLIHNKSDSFEKFKEYKAQVENESGKTIKTFQSDRGGEY 431
           A GGYEYFI+FIDDYSRYGHVYLI NK DSFEKFKEYKA+VENES   +           
Sbjct: 256 AWGGYEYFITFIDDYSRYGHVYLIQNKFDSFEKFKEYKAEVENESETAV----------- 315

Query: 432 MDLRFQDYLIEHGIQSQLS-VPSTPQQNGETQLIIYDDGIEDSLTYKQAMNDVDCDQWIK 491
                  Y++ +    ++S  P    +  + Q+II DDGIED LTY+QAMNDVDCDQWIK
Sbjct: 316 -------YILNNIPSKRVSETPYELWKGRKAQIIIPDDGIEDPLTYEQAMNDVDCDQWIK 375

Query: 492 AMNLEMESMYSNSVRTLVGQTNDVKPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQKEG 551
           +M+LEMESMYSNSV TLV Q NDVKPIGCKWIYKRKRDQAGK QTFKARLVA GYTQKEG
Sbjct: 376 SMDLEMESMYSNSVWTLVEQPNDVKPIGCKWIYKRKRDQAGKTQTFKARLVANGYTQKEG 435

Query: 552 IDYEETFSPIAMIKSIRILLSVATFYDYEIWQMDVKTTFLNG------------NLEEKQ 611
           IDYEETFSP+AMIKSIRILLS+ATFYDYEIWQMDVKT FLN             +L ++Q
Sbjct: 436 IDYEETFSPVAMIKSIRILLSIATFYDYEIWQMDVKTAFLNEFQKGSVAVKYGIHLSKEQ 495

Query: 612 CPKIPQEVEDMSNIPYASAIGSLMYAMLCTKPDICYSVGIVSRYQSNLGRDHWTTVKNIL 671
           CP  PQ+V+DMSNI YAS +GSLMYAMLCT+PDICYSVGIVSRYQS+  RDHW  VKNIL
Sbjct: 496 CPTTPQKVKDMSNISYASTVGSLMYAMLCTRPDICYSVGIVSRYQSSPRRDHWKVVKNIL 555

Query: 672 KYPRRTKDYMLVYGSKDLILTGYTVSDFQTDRDARKSTSGSVFTLNEGAVVWRSIKQSCI 713
           KY RR KDYMLVYGSKDLILTGYT SDFQTD+D RK T GSVFTLN GAV          
Sbjct: 556 KYLRRRKDYMLVYGSKDLILTGYTDSDFQTDKDVRKFTLGSVFTLNGGAV---------- 606

[Close]

BLAST of MELO.jh101847.1 vs. ExPASy TrEMBL
Match: A0A5D3DE90 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold482G00310 PE=4 SV=1)

HSP 1 Score: 742 bits (1916), Expect = 5.95e-254
Identity = 445/791 (56.26%), Postives = 514/791 (64.98%), Query Frame = 0


Query: 49  MNSLIVQLLASEKLNGDNYAAWKSNLNAILVVDDLRFILTEECPKTSASNACRASRKAYD 108
           MNS IVQLLAS+KLNGDNYAAWKSNLN ILVVD L F+LTEECP+T +SNA RASRKAYD
Sbjct: 1   MNSSIVQLLASKKLNGDNYAAWKSNLNTILVVDGLSFVLTEECPQTPSSNANRASRKAYD 60

Query: 109 RWIKANEKAHVYILASMSDVLA--NESLLKS------------------------FIPFQ 168
           RWIK NEKAHVYILASM DVLA  +ESL  +                        +I  +
Sbjct: 61  RWIKVNEKAHVYILASMLDVLAKKHESLATAKEIMDSLKGMFGQPKWSLRHEAIKYIYTK 120

Query: 169 TNASLNKIEFNLTTLLNEFQLF-----------QNLTKGKGKEVEANVATTKGKFERGSS 228
                  +  ++  ++  F +            QNLTK KGKEVEANVATTKGKF+RGSS
Sbjct: 121 RMKEGTSVREHVMDMMMHFNIAEVNRGAIDEANQNLTKSKGKEVEANVATTKGKFKRGSS 180

Query: 229 SKSKAGPSKSNRKIEKKGKGKTPKQNKGKKTAEKDLGAINHICFSFQETSSWKRLFEGKI 288
           S+SK GP K NRKIEKK KGKT K+NK                    ETSS KRL +G I
Sbjct: 181 SRSKTGPLKPNRKIEKKEKGKTSKRNK--------------------ETSSSKRLSKGGI 240

Query: 289 TLKVGTGEMVSAKAVGDLKL-------------IGRLVKSGLLSQLEDNSLPPCDSCLEG 348
           TLKVGTGEMVSAKAVGDLKL             I RLVK  LL+QLEDNSLPPCD CL+G
Sbjct: 241 TLKVGTGEMVSAKAVGDLKLFCNDRYILLKNVLIERLVKIRLLNQLEDNSLPPCDFCLKG 300

Query: 349 KMTKRSFTAKGLRAKTPLELVHSDLCGPMNAKARGGYEYFISFIDDYSRYGHVYLIHNKS 408
           KMTK SF  KGLRAKTPLELVHS+LCGPMN KA+GGYEYFISFIDDYSRYGHVYLIHNKS
Sbjct: 301 KMTKISFAGKGLRAKTPLELVHSNLCGPMNVKAQGGYEYFISFIDDYSRYGHVYLIHNKS 360

Query: 409 DSFEKFKEYKAQVENESGKTIKTFQSDRGGEYMD--------LRFQDYLIEHGIQS---- 468
           DSFEKFK+YKA+VENESG +    +  RGG + D        L    +L E  I++    
Sbjct: 361 DSFEKFKKYKAEVENESGYS----KESRGGLFYDPQENKVFVLTNATFLEEDHIRNDPTR 420

Query: 469 ------QLSVPST---------------------------PQQNG-------------ET 528
                 ++S  ST                           P+++G             E 
Sbjct: 421 SKLILEEISKNSTDRPSSSTKVVDKTRNIGQTHASQELEEPRRSGRVIRQPDRYLGLSEA 480

Query: 529 QLIIYDDGIEDSLTYKQAMNDVDCDQWIKAMNLEMESMYSNSVRTLVGQTNDVKPIGCKW 588
           Q+II DDGIED L +K+ MNDVD DQWIK+M+L+MESMYSN V TLV Q NDV+ IGCKW
Sbjct: 481 QIIIPDDGIEDPLAFKKVMNDVDSDQWIKSMDLKMESMYSNFVWTLVDQPNDVRSIGCKW 540

Query: 589 IYKRKRDQAGKVQTFKARLVAKGYTQKEG-IDYEETFSPIAMIKSIRILLSVATFYDYEI 648
           IYKRK+DQAG +   K  L  +   +  G   Y      +   K+  + +S  ++ D  +
Sbjct: 541 IYKRKQDQAGYLIDIKEWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLAMSYTSYIDKML 600

Query: 649 WQMDVKTTFLNG-------NLEEKQCPKIPQEVEDMSNIPYASAIGSLMYAMLCTKPDIC 708
            +  ++ + +         +L ++QCPK PQEVEDMSNIPYAS + SLMY MLCT+PDI 
Sbjct: 601 SRYKMQNSKMGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASVVESLMYVMLCTRPDIF 660

Query: 709 YSVGIVSRYQSNLGRDHWTTVKNILKYPRRTKDYMLVYGSKDLILTGYTVSDFQTDRDAR 713
           YSVGIVS+YQSNLGRDHWTTVKNILKY RR KDYMLVY SKDLILTGYT SDFQ D+DAR
Sbjct: 661 YSVGIVSKYQSNLGRDHWTTVKNILKYFRRKKDYMLVYCSKDLILTGYTDSDFQIDKDAR 720

[Close]

BLAST of MELO.jh101847.1 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 113.6 bits (283), Expect = 8.7e-25
Identity = 49/116 (42.24%), Postives = 80/116 (68.97%), Query Frame = 0


Query: 447 WIKAMNLEMESMYSNSVRTLVGQTNDVKPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQ 506
           W  AM+ E+ +M +     +     + KPIGCKW+YK K +  G ++ +KARLVAKGYTQ
Sbjct: 98  WCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQ 157

Query: 507 KEGIDYEETFSPIAMIKSIRILLSVATFYDYEIWQMDVKTTFLNGNLEEKQCPKIP 563
           +EGID+ ETFSP+  + S++++L+++  Y++ + Q+D+   FLNG+L+E+   K+P
Sbjct: 158 QEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLP 213

[Close]

BLAST of MELO.jh101847.1 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 73.9 bits (180), Expect = 7.6e-13
Identity = 35/86 (40.70%), Postives = 53/86 (61.63%), Query Frame = 0


Query: 447 WIKAMNLEMESMYSNSVRTLVGQTNDVKPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQ 506
           W +AM  E++++  N    LV    +   +GCKW++K K    G +   KARLVAKG+ Q
Sbjct: 40  WCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQ 99

Query: 507 KEGIDYEETFSPIAMIKSIRILLSVA 533
           +EGI + ET+SP+    +IR +L+VA
Sbjct: 100 EEGIYFVETYSPVVRTATIRTILNVA 125

The following BLAST results are available for this feature:

BLAST of MELO.jh101847.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0056341.1	3.78e-302	59.00	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYK03174.1	2.46e-301	58.95	gag/pol protein [Cucumis melo var. makuwa]	[more]
ADJ18449.1	7.28e-295	44.27	gag/pol protein, partial [Bryonia dioica]	[more]
KAA0054839.1	6.73e-277	69.65	gag/pol protein [Cucumis melo var. makuwa] >TYK27769.1 gag/pol protein [Cucumis ...	[more]
KAA0032972.1	1.23e-253	56.26	gag/pol protein [Cucumis melo var. makuwa] >TYK21997.1 gag/pol protein [Cucumis ...	[more]

BLAST of MELO.jh101847.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	4.3e-61	24.22	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	2.1e-28	24.60	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q9ZT94	4.8e-20	22.73	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P0CV72	8.2e-20	39.10	Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P...	[more]
Q94HW2	9.0e-19	33.17	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]

BLAST of MELO.jh101847.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7US12	1.83e-302	59.00	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold186G0033...	[more]
A0A5D3BVG4	1.19e-301	58.95	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11G00790...	[more]
E2GK51	3.53e-295	44.27	Gag/pol protein (Fragment) OS=Bryonia dioica OX=3652 PE=4 SV=1	[more]
A0A5D3DWF1	3.26e-277	69.65	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1142G003...	[more]
A0A5D3DE90	5.95e-254	56.26	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold482G0031...	[more]

BLAST of MELO.jh101847.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	8.7e-25	42.24	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00820.1	7.6e-13	40.70	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 758..778
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 180..223
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 184..198
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 432..566 coord: 292..420
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 638..712 e-value: 1.88603E-24 score: 97.9241
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 461..557 e-value: 6.3E-27 score: 94.7
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 748..853 e-value: 1.5E-16 score: 62.4
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 308..469 e-value: 2.9E-21 score: 77.7
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 314..414 e-value: 1.9E-9 score: 37.7
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 701..883 score: 11.970717
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 311..421 score: 16.945225
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 751..847
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 311..418

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO.jh101847.1.t1	MELO.jh101847.1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding