MELO.jh101783.1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh101783.1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Integrase catalytic domain-containing protein
Location	chr06: 7173941 .. 7178813 (-)
RNA-Seq Expression	MELO.jh101783.1
Synteny	MELO.jh101783.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTATCAACCAATATTTCACCAAGGTAAAATCTCTATGCCGTGAAATCTCTAAATTAGATCCTACTTCAGCCATTTCAGAATCAAGAATGAGAAGAATTATTATTCATGGTCTTAAATCAGAATATAGAAGTTTTATTGCTACTATTCAAGGTTGTGCGGTCCAACCTTCTTTGATTGACCTAGAAAGTATGCTTGCCAGTCAAGAAGCATTGGCTAAGCAAATGTCGGAGGTCACAATAAAGAGTAATAATGAAGAAGCGCTCTTTAGTGGCCAAAGGAGAGGTCATTCAAAGCTTCAAAAGAAAGTAGGGTCAAAAGGAGTTAAAGAGACTCCAAAGGGCTCTCAATTAGGGGGAGCTAGTAAAAATGATTGTCTACACTGCCATAGAAAGAAGGGTGAATGTTTTAACTGCGGAAAGATAGGCCACTATGTGAGAAAATATCGCCGCAAGAAGAAGATAACATAAAACAATGCAATCACCTCCCAGGCCCAGAGCATTAGTGAAGAAGAATGGGATGCAGAAGCATATTGTGCAACCACAGATCCCAACCCCCCAGTCAACATCCAATGTGGTGGAGAATAAAGCATTAGCTCTCCATGCAGAAGAGGTAAATTATGAAAATGATTGGATTATTGGTTCGGGATGTTATAACCATATGATTGAGATAAGAGGAAGCTACAAAGCACAATAGAGTACAAAGGAAATCGAGTTTTTGTAACTGCAAACAACTCGAAGTTGCTAATAGCTCACGTTGGCAAAACTATGATAGTGCCTCGTTCTAATTCCAATCAAGTGGAATTAGATAATGTATTTTATGTGCTTGAAATGAAGAAGAATTTGGTGTCAGTATCTCAATTGACTTCAGCTAGCAACTTCATCGTGTTTGGATCTAACAATGTCAAGGTGTATCATAATCTTAAAGTAAGTGGTACACCGCTGATGGAAGGACGAAGGATGGACTCCATCTACGTTATGTCAGCGGAGACTACCTACATAAACAAGATGCAGAAGAATGAAACAGCAGATTTGTGGCATGCAAGACTTGGTCATGTTAGCTACAGCAAATTAAAGACAATAATAAACAAGTTCATGCTGAAGGGGTTGCCACAACTTGATATCAGAGAAGACATGGTATGTGTTGGTTGCCAGTATGGGAAAGCACATCAACGGCCATTTAAGGAGTTCAAATTTAGAGCAAAGCAACCATTGGAGTTGGTACATTCAGATGTATTTGGTCTTGTCAAGCAATCTTCAATTAGTGGAATGCGCTACATGGTGACCTTTATTGATGACTTCTCCAAGTATGTTTGAGTGTTTTTTATGAAACAAAAGTTCGAAAAAATTATAAAACTTAAAAAATTCAAAGAACAAGTTAAAAATGAGTTAGGAAAGAGAATTCAATGTTTACGTTCAGATAACACGGGAGAATATATCTCTAATGAATTCTCTCAATACTTGCAAAAGTATAAGATATGTCATCAGTTAACGTGTCCAAACACTTCACAACAAAATGGAGTGGCAGAAAGGAAAAATAGACATCTTGCAGATATATGTTGTAGCATGTCACATGCAAGTAATGTTCCAGGAAGATTCTAGGCTGAGTGTATGAGAACAACGGCCCATGTGGTTAACAGGCTTCCTCAGCAAAGGCTTAAATTTAAATCACCTTATGAAAAGTTGTTGAATATCAAGCCAACAGTTGGACACTTCTGAGTCTTTGGTTCTGTATGCTATGTATTCATACCAGATCATTTGAGAAGCAAGTTTAACAAGAAAGCGATCAGATGCATCTTTGTTGGATATGACAACCAAAGAAAAGGATAGAGGTGCGTTGATCCTATTAGTGGACGATGCTACACATCAAGAAATGTTATATTTGATGAAGCATCATCAAGGTGGACACCTGAATCAGAAAAGTCGACCAAGGATGAGAAGTCTTTCAAAGAAGGATCAAAAGAAGAGATAAGTCAGGTACAACAGGCTTCAATAAAAGCTGAAGAAGAAAACGACGAAGATGAAGAAGAACAGTTAAGAACACAAAGTCCTTGGAAAAGTGGAATACATAATCAAGAACCACAATTACGGAGGTCAACAGAATAAGAAAACCAAATTCCAGGTATGTAGAAGCGTCAAAAAGCATCCAATGGAGAAAAGACTGAAGGAATGAAATTCCGAAAGTGGAAGCGTATGAACGCCGTGCAAGTGAAATTCAATTTGTAAAACCAACAAATTCAAAGAAAAAACAAAAAGTTTAAGCATGCTTCTATGGAGGAAAAGGTGTAAAGAAACTAACATTTGTAGAACCTTAAAGAACTCTTCTTCCAAGCTTTCAAGAGCACCACAAGTCCTTCCTCGTTATTCTCCAGGTAAAGAATCACAGAGAGTTGTAGGCTTCTGTAATTTTTGTGAAGAAAATTTGAGAGAATTCACTATCTTTCTGAAACGCAGAGAGATCAATTAATTAAAAAAAGTCTTTTTAATGAATCTTCGTTTTGTTTAAGAAAAAATCTTAACCATTGATATAGAGAGATAACTTCCCCCCTCTTTTCCACGTATAATAACTCCCTTGGGAGTTATTCTATTTATTTAAAAAACTATATTAATTAAAATAAAATAAATATAAATTTAATCTATATTATATCTCATATAATATAAACTTTATATTATATCATACATAATATAACCAATGGTTTAGATCTCTCATATGATCTATAGTTCTAATATGAATCGAATCCATATTAATTTTAACATATAGTTTATTTATGAATCTTATTCATATTATTATTATTATTATTTGAATCATATTCAAATATTAACTTCTGTCATAAAAACTTTATATTATAATGTATAAAATACATCATATTAAATTGTATCATATACAATTTATTTCCTATAATCAATTTGAACAATTCAAATTAAACCAAAATAAATTTGATTCTCATTTATCCTTATTGAGCTAACAAGGGGACCTTTTGGACCTACAGATTGAAACTCCAATGAAATGAGATTAATTAATTAAACTCTTTAATTAAATTAATCTCTATGCACCCTTCTTACTATAGATATATTTTTATTTTTATGTCCATTAGATATAACCAATCAATAATGCAATGACCCTTCGCAAATTGCTCGTAAGTACAACTAGGCCAAAAATTACCATTTTGCCCCTATAATTACATCTAACTCCTTAAGTACCACTGATTCCTCTAATGAGCAATAATTATAGTCCTACTATAACTGAGTCTCAGGCCAAGAGAGGGTGTGGTGCCACGTTGTTCAAGCCCTAAAATCAGCTCTTAAGAGAGCAATTTCTCCACTTATTCCATCTATAAAGAATGAGTGAATTCCTTCTTGTGTAGCTGTGTTCCCAACTCCCCAATCAGACGAATCCTCAAAATGGTAGGCGTATTGAGTCAGCGACATAGGCCACTCTCACCCATGCAAATCAAATGACCGCCTTCATAGGCAGGAGTTCACAGCTCACTCAGGATTCAGGTCAAGTCACCTGGGTCATCTTGGTCAAATATAGTCTCAACTAATAATGGTGTTAATAAGAGAGACTATTTGTTTCATGGTCCAGTCTTATACACACCGGCAGATTTAGCATAGGCCCAGGGGAGGCGAGCCTCCCTCAACTTTATTGTCTTTATATAATATATATAAATAAAACTACTTAATTTTTAATACTTATAGTTAGCTTAGTGGTTACTCTGACTGCTAGTCCCTTTTTCAACTCAGTTTCAAATCTTACCATATATTTTCTAGATCCGCCACTGCTTATACAAACTCTTTGCATAGAATACCCCGGCTCTAATGTCTCGGCATGAATGATTAGGATCAAATCGTTTGTAGCACTTTAGAACAATTATAACAACTACAAAGCAGGTCGTATTGTCACCAAGATAAGGTCTCCACATACATGTTTGGTTATAGAAGATAAGCTTGGATGTTAGTTTATTGGTTTTGTGGGTTAATGCAACTAAATGTCAAATAAAATACAAATTACAAGACCACGAGATTTAGGACATCAACCCTAACAAAGTCATGGAAGAAGAAGTTAACGCATTAAAAAAGAACCATACTTGGGATTTGGTGCCGAAGCCTAAGGATGTTAAACCTATATCATGTAAATGGGTTTACAAAGTTAAAACATGAGCAAATGGAACAATCGAGAGATATAAAGCTCGATTGGTGGCTCGATGCTTTTCTCAACAGTATGGTTTGGACTATGATGAGACGTTTAATCCAATAGCAAAGCTCACCACTGTTCGAGTCTTATTGGTACTGGCTGCTAGTAAGGACTTGAAGCTATGGCAAATGGATGTTAAGAATGTCTTTTTAAATGGAGAGTTGGATCGAGATATAAATAGAGCAACCAAAAGGATTTGAGAATAAAATTCATCATGACTATGTTTGCAAGCTAAGAAAGGCTTTATATGGCTTGAAGCAAGTGCCAAGAGCATGGTATGGAAATATTGCAGAATTTCTTATTGAAAGTGGCTTTGTAGTAGCTTCAGTAGATTCCAGTTTATTTGTCAAAGCCCAAAACTCAAAGGTCGCAATCATATTAGTCTATGTGGATGATCTAATCATAACAGGAGACCACATAGAAGAAGTTCGACAAATAAAGCAGAATCTACTAATCCGATTTGAAATGAAGGAACTTGGAGAACTAAAGAACTTTCTTGGATTAGAGATTGAGTACTCAGAAAAAGGATTGTTTCTTGGACAACAAAAATATGTGAAGGATCTTCTACAAAAGTATGGTATGAGTGAATGCAAGTCAATATCCACACCAATGGAGGTTAACAAAAAGTTCCGCATGCATGAAGGCAAAGATCTTGCAGATCCAACAATGTATCGTTAG

mRNA sequence

ATGACTATCAACCAATATTTCACCAAGGTAAAATCTCTATGCCGTGAAATCTCTAAATTAGATCCTACTTCAGCCATTTCAGAATCAAGAATGAGAAGAATTATTATTCATGGTCTTAAATCAGAATATAGAAGTTTTATTGCTACTATTCAAGGTTGTGCGGTCCAACCTTCTTTGATTGACCTAGAAAGTATGCTTGCCAGTCAAGAAGCATTGGCTAAGCAAATGTCGGAGGTCACAATAAAGAGTAATAATGAAGAAGCGCTCTTTAGTGGCCAAAGGAGAGGTCATTCAAAGCTTCAAAAGAAAGTAGGGCCCAGAGCATTAGTGAAGAAGAATGGGATGCAGAAGCATATTGTGCAACCACAGATCCCAACCCCCCAGTCAACATCCAATGTGGTGGAGAATAAAGCATTAGCTCTCCATGCAGAAGAGCTACAAAGCACAATAGAGTACAAAGGAAATCGAGTTTTTGTAACTGCAAACAACTCGAAGTTGCTAATAGCTCACGTTGGCAAAACTATGATAGTGCCTCGTTCTAATTCCAATCAAGTGGAATTAGATAATGTATTTTATGTGCTTGAAATGAAGAAGAATTTGGTGTCAGTATCTCAATTGACTTCAGCTAGCAACTTCATCGTGTTTGGATCTAACAATGTCAAGGTGTATCATAATCTTAAAGTAAGTGGTACACCGCTGATGGAAGGACGAAGGATGGACTCCATCTACGTTATGTCAGCGGAGACTACCTACATAAACAAGATGCAGAAGAATGAAACAGCAGATTTGTGGCATGCAAGACTTGGTCATGTTAGCTACAGCAAATTAAAGACAATAATAAACAAGTTCATGCTGAAGGGGTTGCCACAACTTGATATCAGAGAAGACATGGTATGTGTTGGTTGCCAGTATGGGAAAGCACATCAACGGCCATTTAAGGAGTTCAAATTTAGAGCAAAGCAACCATTGGAGTTGGTACATTCAGATGTATTTGGTCTTGTCAAGCAATCTTCAATTAGTGGAATGCGCTACATGGTGACCTTTATTGATGACTTCTCCAAGTGGACACCTGAATCAGAAAAGTCGACCAAGGATGAGAAGTCTTTCAAAGAAGGATCAAAAGAAGAGATAAGTCAGGTACAACAGGCTTCAATAAAAGCTGAAGAAGAAAACGACGAAGATGAAGAAGAACAGTTAAGAACACAAAGTCCTTGGAAAAGTGGAATACATAATCAAGAACCACAATTACGGAGAAAGGCTTTATATGGCTTGAAGCAAGTGCCAAGAGCATGGTATGGAAATATTGCAGAATTTCTTATTGAAAGTGGCTTTGTAGTAGCTTCAGTAGATTCCAGTTTATTTGTCAAAGCCCAAAACTCAAAGGTCGCAATCATATTAGTCTATGTGGATGATCTAATCATAACAGGAGACCACATAGAAGAAGTTCGACAAATAAAGCAGAATCTACTAATCCGATTTGAAATGAAGGAACTTGGAGAACTAAAGAACTTTCTTGGATTAGAGATTGAGTACTCAGAAAAAGGATTGTTTCTTGGACAACAAAAATATGTGAAGGATCTTCTACAAAAGTATGGTATGAGTGAATGCAAGTCAATATCCACACCAATGGAGGTTAACAAAAAGTTCCGCATGCATGAAGGCAAAGATCTTGCAGATCCAACAATGTATCGTTAG

Coding sequence (CDS)

ATGACTATCAACCAATATTTCACCAAGGTAAAATCTCTATGCCGTGAAATCTCTAAATTAGATCCTACTTCAGCCATTTCAGAATCAAGAATGAGAAGAATTATTATTCATGGTCTTAAATCAGAATATAGAAGTTTTATTGCTACTATTCAAGGTTGTGCGGTCCAACCTTCTTTGATTGACCTAGAAAGTATGCTTGCCAGTCAAGAAGCATTGGCTAAGCAAATGTCGGAGGTCACAATAAAGAGTAATAATGAAGAAGCGCTCTTTAGTGGCCAAAGGAGAGGTCATTCAAAGCTTCAAAAGAAAGTAGGGCCCAGAGCATTAGTGAAGAAGAATGGGATGCAGAAGCATATTGTGCAACCACAGATCCCAACCCCCCAGTCAACATCCAATGTGGTGGAGAATAAAGCATTAGCTCTCCATGCAGAAGAGCTACAAAGCACAATAGAGTACAAAGGAAATCGAGTTTTTGTAACTGCAAACAACTCGAAGTTGCTAATAGCTCACGTTGGCAAAACTATGATAGTGCCTCGTTCTAATTCCAATCAAGTGGAATTAGATAATGTATTTTATGTGCTTGAAATGAAGAAGAATTTGGTGTCAGTATCTCAATTGACTTCAGCTAGCAACTTCATCGTGTTTGGATCTAACAATGTCAAGGTGTATCATAATCTTAAAGTAAGTGGTACACCGCTGATGGAAGGACGAAGGATGGACTCCATCTACGTTATGTCAGCGGAGACTACCTACATAAACAAGATGCAGAAGAATGAAACAGCAGATTTGTGGCATGCAAGACTTGGTCATGTTAGCTACAGCAAATTAAAGACAATAATAAACAAGTTCATGCTGAAGGGGTTGCCACAACTTGATATCAGAGAAGACATGGTATGTGTTGGTTGCCAGTATGGGAAAGCACATCAACGGCCATTTAAGGAGTTCAAATTTAGAGCAAAGCAACCATTGGAGTTGGTACATTCAGATGTATTTGGTCTTGTCAAGCAATCTTCAATTAGTGGAATGCGCTACATGGTGACCTTTATTGATGACTTCTCCAAGTGGACACCTGAATCAGAAAAGTCGACCAAGGATGAGAAGTCTTTCAAAGAAGGATCAAAAGAAGAGATAAGTCAGGTACAACAGGCTTCAATAAAAGCTGAAGAAGAAAACGACGAAGATGAAGAAGAACAGTTAAGAACACAAAGTCCTTGGAAAAGTGGAATACATAATCAAGAACCACAATTACGGAGAAAGGCTTTATATGGCTTGAAGCAAGTGCCAAGAGCATGGTATGGAAATATTGCAGAATTTCTTATTGAAAGTGGCTTTGTAGTAGCTTCAGTAGATTCCAGTTTATTTGTCAAAGCCCAAAACTCAAAGGTCGCAATCATATTAGTCTATGTGGATGATCTAATCATAACAGGAGACCACATAGAAGAAGTTCGACAAATAAAGCAGAATCTACTAATCCGATTTGAAATGAAGGAACTTGGAGAACTAAAGAACTTTCTTGGATTAGAGATTGAGTACTCAGAAAAAGGATTGTTTCTTGGACAACAAAAATATGTGAAGGATCTTCTACAAAAGTATGGTATGAGTGAATGCAAGTCAATATCCACACCAATGGAGGTTAACAAAAAGTTCCGCATGCATGAAGGCAAAGATCTTGCAGATCCAACAATGTATCGTTAG

Protein sequence

MTINQYFTKVKSLCREISKLDPTSAISESRMRRIIIHGLKSEYRSFIATIQGCAVQPSLIDLESMLASQEALAKQMSEVTIKSNNEEALFSGQRRGHSKLQKKVGPRALVKKNGMQKHIVQPQIPTPQSTSNVVENKALALHAEELQSTIEYKGNRVFVTANNSKLLIAHVGKTMIVPRSNSNQVELDNVFYVLEMKKNLVSVSQLTSASNFIVFGSNNVKVYHNLKVSGTPLMEGRRMDSIYVMSAETTYINKMQKNETADLWHARLGHVSYSKLKTIINKFMLKGLPQLDIREDMVCVGCQYGKAHQRPFKEFKFRAKQPLELVHSDVFGLVKQSSISGMRYMVTFIDDFSKWTPESEKSTKDEKSFKEGSKEEISQVQQASIKAEEENDEDEEEQLRTQSPWKSGIHNQEPQLRRKALYGLKQVPRAWYGNIAEFLIESGFVVASVDSSLFVKAQNSKVAIILVYVDDLIITGDHIEEVRQIKQNLLIRFEMKELGELKNFLGLEIEYSEKGLFLGQQKYVKDLLQKYGMSECKSISTPMEVNKKFRMHEGKDLADPTMYR

Homology

[Close]

BLAST of MELO.jh101783.1 vs. NCBI nr
Match: KAA0046986.1 (Integrase, catalytic core [Cucumis melo var. makuwa] >TYK04797.1 Integrase, catalytic core [Cucumis melo var. makuwa])

HSP 1 Score: 665 bits (1715), Expect = 7.74e-227
Identity = 423/833 (50.78%), Postives = 453/833 (54.38%), Query Frame = 0


Query: 65  MLASQEALAKQMSEVTIKSNNEEALFSGQRRGHSKLQKKVGPRAL--------------- 124
           MLASQEALAKQMSEV IKSNNEEALFSGQRRGHSK QKKVG +                 
Sbjct: 1   MLASQEALAKQMSEVIIKSNNEEALFSGQRRGHSKFQKKVGSKGAEETPKGSQVGGASKN 60

Query: 125 --------------------------VKKNGMQKHIVQPQI------------------P 184
                                      KK   + + V  Q                   P
Sbjct: 61  DRLHGHRKKGECYNCGKIGHYAREFRCKKKIAESNAVTSQAESISEEEWDAEACCATTDP 120

Query: 185 TPQSTSNVVENKALALHAEE-----------------------LQSTIEYKGNRVFVTAN 244
            PQSTSNV+EN+ LALHAEE                       LQ+TIEYKG+RV VTAN
Sbjct: 121 NPQSTSNVLENEVLALHAEEVNYENDWIVDSGCSNHMTGDKRKLQNTIEYKGSRVVVTAN 180

Query: 245 NSKLLIAHVGKTMIVPRSNSNQVELDNVFYVLEMKKNLVSVSQLTSASNFIVFGSNNVKV 304
           NSKL IAHVGKTMIVPRSNSNQVELDNVFYV  MKKNLVSVSQLTSA NF+VFG ++VKV
Sbjct: 181 NSKLPIAHVGKTMIVPRSNSNQVELDNVFYVSGMKKNLVSVSQLTSAGNFVVFGPDDVKV 240

Query: 305 YHNLKVSGTPLMEGRRMDSIYVMSAETTYINKMQKNETADLWHARLGHVSYSKLKTIINK 364
           YHNLKVSGTPLMEGRRMDSIYVMSAET Y+NK +KN+TADLWHARLGHVS SKLKTIINK
Sbjct: 241 YHNLKVSGTPLMEGRRMDSIYVMSAETAYVNKTRKNDTADLWHARLGHVSCSKLKTIINK 300

Query: 365 FMLKGLPQLDIREDMVCVGCQYGKAHQRPFKEFKFRAKQPLELVHSDVFGLVKQSSISGM 424
            MLKGLPQLDIREDMVC GCQYGKAHQ PFK+ KFRAKQPLELVHSDVF  VKQSS+SGM
Sbjct: 301 TMLKGLPQLDIREDMVCAGCQYGKAHQLPFKDSKFRAKQPLELVHSDVFDPVKQSSVSGM 360

Query: 425 RYMVTFIDDF-------------------------------------------------- 484
           RYMVTFIDDF                                                  
Sbjct: 361 RYMVTFIDDFFRLPQQRLEFKSPYEKLLNIKPTVGHFRVFGCVCYVFVPDHLRSKFNKKA 420

Query: 485 -------------------------------------SKWTPESEKSTKDEKSFKEGSKE 544
                                                S W PESEKSTK+EKSFKEGSKE
Sbjct: 421 IRCIFVGYDNQRKGWRCVDPTSGRCYTSRNVIFDEASSWWIPESEKSTKNEKSFKEGSKE 480

Query: 545 EISQVQQASIKAEEENDEDEEEQLRTQSPWKSGIHNQEPQLRR----------------- 563
           EISQVQQA  +AEE NDEDEEEQ+RTQSPW+SGI+NQEPQLRR                 
Sbjct: 481 EISQVQQAPTEAEEGNDEDEEEQVRTQSPWQSGIYNQEPQLRRSTRIRKPNSRYVNAALA 540

[Close]

BLAST of MELO.jh101783.1 vs. NCBI nr
Match: TYK22269.1 (Integrase, catalytic core [Cucumis melo var. makuwa])

HSP 1 Score: 556 bits (1433), Expect = 4.57e-192
Identity = 309/405 (76.30%), Postives = 323/405 (79.75%), Query Frame = 0


Query: 1   MTINQYFTKVKSLCREISKLDPTSAISESRMRRIIIHGLKSEYRSFIATIQGCAVQPSLI 60
           MTINQYFTKV SLCREISKLD TSAISESRMRRIIIHGLKSEYRSFIATIQGC VQPSLI
Sbjct: 45  MTINQYFTKVNSLCREISKLDHTSAISESRMRRIIIHGLKSEYRSFIATIQGCVVQPSLI 104

Query: 61  DLESMLASQEALAKQMSEVTIKSNNEEALFSGQRRGHSKLQKKVGPRALVKK------NG 120
           DLESMLASQEALAKQMSEVTIKSNNEEALFSGQRRGHSKLQKKVG + + +        G
Sbjct: 105 DLESMLASQEALAKQMSEVTIKSNNEEALFSGQRRGHSKLQKKVGSKGVKETPKGSQLGG 164

Query: 121 MQK--------------------HIVQPQIPTPQST-SNVVENKALALHAEE-------- 180
             K                    H V+      + T +N + ++A ++  EE        
Sbjct: 165 ASKSDCLHCHRKKGECYNCGKIGHYVREYRRKKKITENNAITSQAQSISEEEWDAEACCA 224

Query: 181 ----------------LQSTIEYKGNRVFVTANNSKLLIAHVGKTMIVPRSNSNQVELDN 240
                           LQSTIEYKG+RVFVTANNSKL IAHVGKTM VPR NSNQVELDN
Sbjct: 225 TTDPKPPVNIQCDKRKLQSTIEYKGSRVFVTANNSKLPIAHVGKTMTVPRFNSNQVELDN 284

Query: 241 VFYVLEMKKNLVSVSQLTSASNFIVFGSNNVKVYHNLKVSGTPLMEGRRMDSIYVMSAET 300
           VFYVLEMKKNLVSVSQLTSASNFIVFGSNNVKVYHNLKVSGTPLMEGRRMDSIYVMSAET
Sbjct: 285 VFYVLEMKKNLVSVSQLTSASNFIVFGSNNVKVYHNLKVSGTPLMEGRRMDSIYVMSAET 344

Query: 301 TYINKMQKNETADLWHARLGHVSYSKLKTIINKFMLKGLPQLDIREDMVCVGCQYGKAHQ 354
           TYINK QKNETA LWHARLGHVSYSKLKTIINKFMLKGLPQLDIREDMVCVG QYGKAHQ
Sbjct: 345 TYINKTQKNETAYLWHARLGHVSYSKLKTIINKFMLKGLPQLDIREDMVCVGFQYGKAHQ 404

[Close]

BLAST of MELO.jh101783.1 vs. NCBI nr
Match: KAA0033603.1 (Integrase, catalytic core [Cucumis melo var. makuwa])

HSP 1 Score: 489 bits (1259), Expect = 6.86e-169
Identity = 249/252 (98.81%), Postives = 250/252 (99.21%), Query Frame = 0


Query: 106 PRALVKKNGMQKHIVQPQIPTPQSTSNVVENKALALHAEE--LQSTIEYKGNRVFVTANN 165
           PRALVKKNGMQKHIVQPQIPTPQSTSNVVENKALALHAEE  LQSTIEYKGNRVFVTANN
Sbjct: 7   PRALVKKNGMQKHIVQPQIPTPQSTSNVVENKALALHAEERKLQSTIEYKGNRVFVTANN 66

Query: 166 SKLLIAHVGKTMIVPRSNSNQVELDNVFYVLEMKKNLVSVSQLTSASNFIVFGSNNVKVY 225
           SKLLIAHVGKTMIVPRSNSNQVELDNVFYVLEMKKNLVSVSQLTSASNFIVFGSNNVKVY
Sbjct: 67  SKLLIAHVGKTMIVPRSNSNQVELDNVFYVLEMKKNLVSVSQLTSASNFIVFGSNNVKVY 126

Query: 226 HNLKVSGTPLMEGRRMDSIYVMSAETTYINKMQKNETADLWHARLGHVSYSKLKTIINKF 285
           HNLKVSGTPLMEGRRMDSIYVMSAETTYINKMQKNETADLWHARLGHVSYSKLKTIINKF
Sbjct: 127 HNLKVSGTPLMEGRRMDSIYVMSAETTYINKMQKNETADLWHARLGHVSYSKLKTIINKF 186

Query: 286 MLKGLPQLDIREDMVCVGCQYGKAHQRPFKEFKFRAKQPLELVHSDVFGLVKQSSISGMR 345
           MLKGLPQLDIREDMVCVGCQYGKAHQRPFKEFKFRAKQPLELVHSDVFGLVKQSSISGMR
Sbjct: 187 MLKGLPQLDIREDMVCVGCQYGKAHQRPFKEFKFRAKQPLELVHSDVFGLVKQSSISGMR 246

Query: 346 YMVTFIDDFSKW 355
           YMVTFIDDFSK+
Sbjct: 247 YMVTFIDDFSKY 258

[Close]

BLAST of MELO.jh101783.1 vs. NCBI nr
Match: KAA0035381.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 475 bits (1223), Expect = 3.61e-160
Identity = 289/501 (57.68%), Postives = 318/501 (63.47%), Query Frame = 0


Query: 125 PTPQSTSNVVENKALALHAEE-----------------------LQSTIEYKGNRVFVTA 184
           P PQSTSNVVEN+ LALHAEE                       LQ+TIEYKG+RV V+A
Sbjct: 12  PNPQSTSNVVENEVLALHAEEVNYENDWIVDSGCSNHMTRDKRKLQNTIEYKGSRVVVSA 71

Query: 185 NNSKLLIAHVGKTMIVPRSNSNQVELDNVFYVLEMKKNLVSVSQLTSASNFIVFGSNNVK 244
           NNSKL IAHVGKTMIVPRSNSNQVELDNVFYV  MKKNLVS+SQLTSA NF+VFG     
Sbjct: 72  NNSKLPIAHVGKTMIVPRSNSNQVELDNVFYVPGMKKNLVSISQLTSAINFVVFGPEKS- 131

Query: 245 VYHNLKVSGTPLMEGRRMDSIYVMSAETTYINKMQKNETADLWHARLGHVSYSKLKTIIN 304
                                                               SKLKTIIN
Sbjct: 132 ----------------------------------------------------SKLKTIIN 191

Query: 305 KFMLKGLPQLDIREDMVCVGCQYGKAHQRPFKEFKFRAKQPLELVHSDVFGLVKQSSISG 364
           KF+LKGLPQLDIREDMVC  CQYGKAHQ  FKE KFRAKQPLELVHS+VFG VKQSS+ G
Sbjct: 192 KFVLKGLPQLDIREDMVCASCQYGKAHQLQFKESKFRAKQPLELVHSNVFGPVKQSSLGG 251

Query: 365 MRYMVTFIDDFSK-----------------WTPESEKSTKDEKSFKEGSKEEISQ----- 424
           MRYMVT IDDFS                  WTPESEKSTKDEKSFKEGSKEEISQ     
Sbjct: 252 MRYMVTLIDDFSSGRCYASRNVIFDEASSWWTPESEKSTKDEKSFKEGSKEEISQYGLDY 311

Query: 425 -------------------------------VQQASIKAEEENDEDEEEQLRTQSP--WK 484
                                          V+ A +  E + D      +  + P  +K
Sbjct: 312 DETLGPVAKLTTIRVLLALATCKDWKLWKMDVKNAFLNGELDRD------IYMEQPKGFK 371

Query: 485 SGIHNQEPQLRRKALYGLKQVPRAWYGNIAEFLIESGFVVASVDSSLFVKAQNSKVAIIL 544
             IH+    + +  +YGLKQVPRAWYG IA+FL+ES F V S DSSLFVKAQ+SKVAIIL
Sbjct: 372 DKIHHD--YVCKLRIYGLKQVPRAWYGKIAKFLVESSFTVVSADSSLFVKAQDSKVAIIL 431

Query: 545 VYVDDLIITGDHIEEVRQIKQNLLIRFEMKELGELKNFLGLEIEYSEKGLFLGQQKYVKD 547
           VY+D+LIITGDHI+E RQIKQNLL+RFEMKELGELK+FLGLE+EYSEKGLFLGQQKYVKD
Sbjct: 432 VYMDNLIITGDHIDEARQIKQNLLVRFEMKELGELKHFLGLEMEYSEKGLFLGQQKYVKD 451

[Close]

BLAST of MELO.jh101783.1 vs. NCBI nr
Match: TYK03493.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 445 bits (1144), Expect = 8.38e-148
Identity = 273/481 (56.76%), Postives = 306/481 (63.62%), Query Frame = 0


Query: 125 PTPQSTSNVVENKALALHAEE-----------------------LQSTIEYKGNRVFVTA 184
           P PQSTSNVVEN+ LALHAEE                       LQ+ IEYKG+RV VTA
Sbjct: 77  PNPQSTSNVVENEVLALHAEEVNYENDWIVDSGCSNHMTRDKRKLQNIIEYKGSRVVVTA 136

Query: 185 NNSKLLIAHVGKTMIVPRSNSNQVELDNVFYVLEMKKNLVSVSQLTSASNFIVFGSNNVK 244
           NNSKL IAHVGKTMIVPRSNSNQVELDNVFYV  MKKNLVS+ QLTSA NF+VFG     
Sbjct: 137 NNSKLPIAHVGKTMIVPRSNSNQVELDNVFYVPGMKKNLVSIPQLTSAINFVVFGPEKS- 196

Query: 245 VYHNLKVSGTPLMEGRRMDSIYVMSAETTYINKMQKNETADLWHARLGHVSYSKLKTIIN 304
                                                             SYSKLKTIIN
Sbjct: 197 --------------------------------------------------SYSKLKTIIN 256

Query: 305 KFMLKGLPQLDIREDMVCVGCQYGKAHQRPFKEFKFRAKQPLELVHSDVFGLVKQSSISG 364
           KFMLKGLPQLDIREDMVCV CQYGKAHQ  FKE KFRAKQPLELVHS+VFG VKQSS+ G
Sbjct: 257 KFMLKGLPQLDIREDMVCVSCQYGKAHQLQFKESKFRAKQPLELVHSNVFGPVKQSSLGG 316

Query: 365 MRYMVTFIDDFSKWT-----------------------PESEKST----------KDEKS 424
           MRYMVT IDDFS+ T                       P ++ +T          KD K 
Sbjct: 317 MRYMVTLIDDFSRTTIVEINQNKKTKFQYGLDYDETLGPVAKFTTIRVLLALATCKDSKL 376

Query: 425 FKEGSKEEISQVQQASIKAEEENDEDEEEQLRTQSP--WKSGIHNQEPQLRRKALYGLKQ 484
           +K         V+ A +  E + D      +  + P  +K  IH+    + +  +YGLKQ
Sbjct: 377 WK-------MDVKNAFLNEEFDRD------ICIEQPKGFKDKIHHD--YVCKLRIYGLKQ 436

Query: 485 VPRAWYGNIAEFLIESGFVVASVDSSLFVKAQNSKVAIILVYVDDLIITGDHIEEVRQIK 544
           VPRAWYG IA+FL+ES F V S DSSLFVKAQ+SKVAIILVY+D+LIITGDHI++ RQIK
Sbjct: 437 VPRAWYGKIAKFLVESSFTVVSADSSLFVKAQDSKVAIILVYMDNLIITGDHIDKARQIK 491

Query: 545 QNLLIRFEMKELGELKNFLGLEIEYSEKGLFLGQQKYVKDLLQKYGMSECKSISTPMEVN 547
           QNLL+RFEMKELGELK+FLGLE+EYSEKGLFLGQQKYVKDLLQKY MS+CK ISTPMEVN
Sbjct: 497 QNLLVRFEMKELGELKHFLGLEMEYSEKGLFLGQQKYVKDLLQKYDMSDCKKISTPMEVN 491

[Close]

BLAST of MELO.jh101783.1 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 3.5e-26
Identity = 64/147 (43.54%), Postives = 89/147 (60.54%), Query Frame = 0


Query: 418  RKALYGLKQVPRAWYGNIAEFLIESGFVVASVDSSLFVKAQNSKVAIILVYVDDLIITGD 477
            RKALYGLKQ PRAWY  +  +L+  GFV +  D+SLFV  +   +  +LVYVDD++ITG+
Sbjct: 1100 RKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGN 1159

Query: 478  HIEEVRQIKQNLLIRFEMKELGELKNFLGLEIEYSEKGLFLGQQKYVKDLLQKYGMSECK 537
                +     NL  RF +K+  EL  FLG+E +    GL L Q++Y+ DLL +  M   K
Sbjct: 1160 DPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKRVPTGLHLSQRRYILDLLARTNMITAK 1219

Query: 538  SISTPMEVNKKFRMHEGKDLADPTMYR 565
             ++TPM  + K  ++ G  L DPT YR
Sbjct: 1220 PVTTPMAPSPKLSLYSGTKLTDPTEYR 1246

[Close]

BLAST of MELO.jh101783.1 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 1.0e-25
Identity = 63/147 (42.86%), Postives = 89/147 (60.54%), Query Frame = 0


Query: 418  RKALYGLKQVPRAWYGNIAEFLIESGFVVASVDSSLFVKAQNSKVAIILVYVDDLIITGD 477
            RKA+YGLKQ PRAWY  +  +L+  GFV +  D+SLFV  +   +  +LVYVDD++ITG+
Sbjct: 1083 RKAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGN 1142

Query: 478  HIEEVRQIKQNLLIRFEMKELGELKNFLGLEIEYSEKGLFLGQQKYVKDLLQKYGMSECK 537
                ++     L  RF +KE  +L  FLG+E +   +GL L Q++Y  DLL +  M   K
Sbjct: 1143 DTVLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAK 1202

Query: 538  SISTPMEVNKKFRMHEGKDLADPTMYR 565
             ++TPM  + K  +H G  L DPT YR
Sbjct: 1203 PVATPMATSPKLTLHSGTKLPDPTEYR 1229

[Close]

BLAST of MELO.jh101783.1 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 95.5 bits (236), Expect = 2.0e-18
Identity = 47/127 (37.01%), Postives = 77/127 (60.63%), Query Frame = 0


Query: 419  KALYGLKQVPRAWYGNIAEFLIESGFVVASVDSSLFV--KAQNSKVAIILVYVDDLIITG 478
            KA+YGLKQ  R W+    + L E  FV +SVD  +++  K   ++   +L+YVDD++I  
Sbjct: 1036 KAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIAT 1095

Query: 479  DHIEEVRQIKQNLLIRFEMKELGELKNFLGLEIEYSEKGLFLGQQKYVKDLLQKYGMSEC 538
              +  +   K+ L+ +F M +L E+K+F+G+ IE  E  ++L Q  YVK +L K+ M  C
Sbjct: 1096 GDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENC 1155

Query: 539  KSISTPM 544
             ++STP+
Sbjct: 1156 NAVSTPL 1162

[Close]

BLAST of MELO.jh101783.1 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 4.4e-13
Identity = 51/170 (30.00%), Postives = 95/170 (55.88%), Query Frame = 0


Query: 379  QVQQASIKAEEENDEDEEEQLRTQSPWKSGIHNQEPQLRR--KALYGLKQVPRAWYGNIA 438
            +V+Q  +K    +  D EE++  + P    +  ++  + +  K+LYGLKQ PR WY    
Sbjct: 917  EVEQLDVKTAFLHG-DLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFD 976

Query: 439  EFLIESGFVVASVDSSLFVKA-QNSKVAIILVYVDDLIITGDHIEEVRQIKQNLLIRFEM 498
             F+    ++    D  ++ K    +   I+L+YVDD++I G     + ++K +L   F+M
Sbjct: 977  SFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDM 1036

Query: 499  KELGELKNFLGLEI--EYSEKGLFLGQQKYVKDLLQKYGMSECKSISTPM 544
            K+LG  +  LG++I  E + + L+L Q+KY++ +L+++ M   K +STP+
Sbjct: 1037 KDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPL 1085

HSP 2 Score: 70.1 bits (170), Expect = 9.1e-11
Identity = 59/207 (28.50%), Postives = 94/207 (45.41%), Query Frame = 0


Query: 162 NNSKLLIAHVGKTMIVPRSNSNQVELDNVFYVLEMKKNLVSVSQLTSASNFIVFGSNNVK 221
           N S   IA +G   I        V L +V +V +++ NL+S   L        F +   +
Sbjct: 326 NTSYSKIAGIGDICIKTNVGCTLV-LKDVRHVPDLRMNLISGIALDRDGYESYFANQKWR 385

Query: 222 VYHNLKVSGTPLMEGRRMDSIYVMSAETTY--INKMQKNETADLWHARLGHVSYSKLKTI 281
               L      + +G    ++Y  +AE     +N  Q   + DLWH R+GH+S   L+ +
Sbjct: 386 ----LTKGSLVIAKGVARGTLYRTNAEICQGELNAAQDEISVDLWHKRMGHMSEKGLQIL 445

Query: 282 INKFMLKGLPQLDIREDMVCVGCQYGKAHQRPFKEFKFRAKQPLELVHSDVFGLVKQSSI 341
             K ++       ++    C  C +GK H+  F+    R    L+LV+SDV G ++  S+
Sbjct: 446 AKKSLISYAKGTTVKP---CDYCLFGKQHRVSFQTSSERKLNILDLVYSDVCGPMEIESM 505

Query: 342 SGMRYMVTFIDDFSKWTPESEKSTKDE 367
            G +Y VTFIDD S+        TKD+
Sbjct: 506 GGNKYFVTFIDDASRKLWVYILKTKDQ 524

[Close]

BLAST of MELO.jh101783.1 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 1.0e-09
Identity = 36/100 (36.00%), Postives = 57/100 (57.00%), Query Frame = 0


Query: 465 ILVYVDDLIITGDHIEEVRQIKQNLLIRFEMKELGELKNFLGLEIEYSEKGLFLGQQKYV 524
           +L+YVDD+++TG     +  +   L   F MK+LG +  FLG++I+    GLFL Q KY 
Sbjct: 3   LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62

Query: 525 KDLLQKYGMSECKSISTPMEVNKKFRMHEGKDLADPTMYR 565
           + +L   GM +CK +STP+ +     +   K   DP+ +R
Sbjct: 63  EQILNNAGMLDCKPMSTPLPLKLNSSVSTAK-YPDPSDFR 101

[Close]

BLAST of MELO.jh101783.1 vs. ExPASy TrEMBL
Match: A0A5A7TYD2 (Integrase, catalytic core OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold68G001190 PE=4 SV=1)

HSP 1 Score: 665 bits (1715), Expect = 3.75e-227
Identity = 423/833 (50.78%), Postives = 453/833 (54.38%), Query Frame = 0


Query: 65  MLASQEALAKQMSEVTIKSNNEEALFSGQRRGHSKLQKKVGPRAL--------------- 124
           MLASQEALAKQMSEV IKSNNEEALFSGQRRGHSK QKKVG +                 
Sbjct: 1   MLASQEALAKQMSEVIIKSNNEEALFSGQRRGHSKFQKKVGSKGAEETPKGSQVGGASKN 60

Query: 125 --------------------------VKKNGMQKHIVQPQI------------------P 184
                                      KK   + + V  Q                   P
Sbjct: 61  DRLHGHRKKGECYNCGKIGHYAREFRCKKKIAESNAVTSQAESISEEEWDAEACCATTDP 120

Query: 185 TPQSTSNVVENKALALHAEE-----------------------LQSTIEYKGNRVFVTAN 244
            PQSTSNV+EN+ LALHAEE                       LQ+TIEYKG+RV VTAN
Sbjct: 121 NPQSTSNVLENEVLALHAEEVNYENDWIVDSGCSNHMTGDKRKLQNTIEYKGSRVVVTAN 180

Query: 245 NSKLLIAHVGKTMIVPRSNSNQVELDNVFYVLEMKKNLVSVSQLTSASNFIVFGSNNVKV 304
           NSKL IAHVGKTMIVPRSNSNQVELDNVFYV  MKKNLVSVSQLTSA NF+VFG ++VKV
Sbjct: 181 NSKLPIAHVGKTMIVPRSNSNQVELDNVFYVSGMKKNLVSVSQLTSAGNFVVFGPDDVKV 240

Query: 305 YHNLKVSGTPLMEGRRMDSIYVMSAETTYINKMQKNETADLWHARLGHVSYSKLKTIINK 364
           YHNLKVSGTPLMEGRRMDSIYVMSAET Y+NK +KN+TADLWHARLGHVS SKLKTIINK
Sbjct: 241 YHNLKVSGTPLMEGRRMDSIYVMSAETAYVNKTRKNDTADLWHARLGHVSCSKLKTIINK 300

Query: 365 FMLKGLPQLDIREDMVCVGCQYGKAHQRPFKEFKFRAKQPLELVHSDVFGLVKQSSISGM 424
            MLKGLPQLDIREDMVC GCQYGKAHQ PFK+ KFRAKQPLELVHSDVF  VKQSS+SGM
Sbjct: 301 TMLKGLPQLDIREDMVCAGCQYGKAHQLPFKDSKFRAKQPLELVHSDVFDPVKQSSVSGM 360

Query: 425 RYMVTFIDDF-------------------------------------------------- 484
           RYMVTFIDDF                                                  
Sbjct: 361 RYMVTFIDDFFRLPQQRLEFKSPYEKLLNIKPTVGHFRVFGCVCYVFVPDHLRSKFNKKA 420

Query: 485 -------------------------------------SKWTPESEKSTKDEKSFKEGSKE 544
                                                S W PESEKSTK+EKSFKEGSKE
Sbjct: 421 IRCIFVGYDNQRKGWRCVDPTSGRCYTSRNVIFDEASSWWIPESEKSTKNEKSFKEGSKE 480

Query: 545 EISQVQQASIKAEEENDEDEEEQLRTQSPWKSGIHNQEPQLRR----------------- 563
           EISQVQQA  +AEE NDEDEEEQ+RTQSPW+SGI+NQEPQLRR                 
Sbjct: 481 EISQVQQAPTEAEEGNDEDEEEQVRTQSPWQSGIYNQEPQLRRSTRIRKPNSRYVNAALA 540

[Close]

BLAST of MELO.jh101783.1 vs. ExPASy TrEMBL
Match: A0A5D3DG87 (Integrase, catalytic core OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold440G00230 PE=4 SV=1)

HSP 1 Score: 556 bits (1433), Expect = 2.21e-192
Identity = 309/405 (76.30%), Postives = 323/405 (79.75%), Query Frame = 0


Query: 1   MTINQYFTKVKSLCREISKLDPTSAISESRMRRIIIHGLKSEYRSFIATIQGCAVQPSLI 60
           MTINQYFTKV SLCREISKLD TSAISESRMRRIIIHGLKSEYRSFIATIQGC VQPSLI
Sbjct: 45  MTINQYFTKVNSLCREISKLDHTSAISESRMRRIIIHGLKSEYRSFIATIQGCVVQPSLI 104

Query: 61  DLESMLASQEALAKQMSEVTIKSNNEEALFSGQRRGHSKLQKKVGPRALVKK------NG 120
           DLESMLASQEALAKQMSEVTIKSNNEEALFSGQRRGHSKLQKKVG + + +        G
Sbjct: 105 DLESMLASQEALAKQMSEVTIKSNNEEALFSGQRRGHSKLQKKVGSKGVKETPKGSQLGG 164

Query: 121 MQK--------------------HIVQPQIPTPQST-SNVVENKALALHAEE-------- 180
             K                    H V+      + T +N + ++A ++  EE        
Sbjct: 165 ASKSDCLHCHRKKGECYNCGKIGHYVREYRRKKKITENNAITSQAQSISEEEWDAEACCA 224

Query: 181 ----------------LQSTIEYKGNRVFVTANNSKLLIAHVGKTMIVPRSNSNQVELDN 240
                           LQSTIEYKG+RVFVTANNSKL IAHVGKTM VPR NSNQVELDN
Sbjct: 225 TTDPKPPVNIQCDKRKLQSTIEYKGSRVFVTANNSKLPIAHVGKTMTVPRFNSNQVELDN 284

Query: 241 VFYVLEMKKNLVSVSQLTSASNFIVFGSNNVKVYHNLKVSGTPLMEGRRMDSIYVMSAET 300
           VFYVLEMKKNLVSVSQLTSASNFIVFGSNNVKVYHNLKVSGTPLMEGRRMDSIYVMSAET
Sbjct: 285 VFYVLEMKKNLVSVSQLTSASNFIVFGSNNVKVYHNLKVSGTPLMEGRRMDSIYVMSAET 344

Query: 301 TYINKMQKNETADLWHARLGHVSYSKLKTIINKFMLKGLPQLDIREDMVCVGCQYGKAHQ 354
           TYINK QKNETA LWHARLGHVSYSKLKTIINKFMLKGLPQLDIREDMVCVG QYGKAHQ
Sbjct: 345 TYINKTQKNETAYLWHARLGHVSYSKLKTIINKFMLKGLPQLDIREDMVCVGFQYGKAHQ 404

[Close]

BLAST of MELO.jh101783.1 vs. ExPASy TrEMBL
Match: A0A5A7ST06 (Integrase, catalytic core OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold239G00370 PE=4 SV=1)

HSP 1 Score: 489 bits (1259), Expect = 3.32e-169
Identity = 249/252 (98.81%), Postives = 250/252 (99.21%), Query Frame = 0


Query: 106 PRALVKKNGMQKHIVQPQIPTPQSTSNVVENKALALHAEE--LQSTIEYKGNRVFVTANN 165
           PRALVKKNGMQKHIVQPQIPTPQSTSNVVENKALALHAEE  LQSTIEYKGNRVFVTANN
Sbjct: 7   PRALVKKNGMQKHIVQPQIPTPQSTSNVVENKALALHAEERKLQSTIEYKGNRVFVTANN 66

Query: 166 SKLLIAHVGKTMIVPRSNSNQVELDNVFYVLEMKKNLVSVSQLTSASNFIVFGSNNVKVY 225
           SKLLIAHVGKTMIVPRSNSNQVELDNVFYVLEMKKNLVSVSQLTSASNFIVFGSNNVKVY
Sbjct: 67  SKLLIAHVGKTMIVPRSNSNQVELDNVFYVLEMKKNLVSVSQLTSASNFIVFGSNNVKVY 126

Query: 226 HNLKVSGTPLMEGRRMDSIYVMSAETTYINKMQKNETADLWHARLGHVSYSKLKTIINKF 285
           HNLKVSGTPLMEGRRMDSIYVMSAETTYINKMQKNETADLWHARLGHVSYSKLKTIINKF
Sbjct: 127 HNLKVSGTPLMEGRRMDSIYVMSAETTYINKMQKNETADLWHARLGHVSYSKLKTIINKF 186

Query: 286 MLKGLPQLDIREDMVCVGCQYGKAHQRPFKEFKFRAKQPLELVHSDVFGLVKQSSISGMR 345
           MLKGLPQLDIREDMVCVGCQYGKAHQRPFKEFKFRAKQPLELVHSDVFGLVKQSSISGMR
Sbjct: 187 MLKGLPQLDIREDMVCVGCQYGKAHQRPFKEFKFRAKQPLELVHSDVFGLVKQSSISGMR 246

Query: 346 YMVTFIDDFSKW 355
           YMVTFIDDFSK+
Sbjct: 247 YMVTFIDDFSKY 258

[Close]

BLAST of MELO.jh101783.1 vs. ExPASy TrEMBL
Match: A0A5A7T1C6 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold597G00190 PE=4 SV=1)

HSP 1 Score: 475 bits (1223), Expect = 1.75e-160
Identity = 289/501 (57.68%), Postives = 318/501 (63.47%), Query Frame = 0


Query: 125 PTPQSTSNVVENKALALHAEE-----------------------LQSTIEYKGNRVFVTA 184
           P PQSTSNVVEN+ LALHAEE                       LQ+TIEYKG+RV V+A
Sbjct: 12  PNPQSTSNVVENEVLALHAEEVNYENDWIVDSGCSNHMTRDKRKLQNTIEYKGSRVVVSA 71

Query: 185 NNSKLLIAHVGKTMIVPRSNSNQVELDNVFYVLEMKKNLVSVSQLTSASNFIVFGSNNVK 244
           NNSKL IAHVGKTMIVPRSNSNQVELDNVFYV  MKKNLVS+SQLTSA NF+VFG     
Sbjct: 72  NNSKLPIAHVGKTMIVPRSNSNQVELDNVFYVPGMKKNLVSISQLTSAINFVVFGPEKS- 131

Query: 245 VYHNLKVSGTPLMEGRRMDSIYVMSAETTYINKMQKNETADLWHARLGHVSYSKLKTIIN 304
                                                               SKLKTIIN
Sbjct: 132 ----------------------------------------------------SKLKTIIN 191

Query: 305 KFMLKGLPQLDIREDMVCVGCQYGKAHQRPFKEFKFRAKQPLELVHSDVFGLVKQSSISG 364
           KF+LKGLPQLDIREDMVC  CQYGKAHQ  FKE KFRAKQPLELVHS+VFG VKQSS+ G
Sbjct: 192 KFVLKGLPQLDIREDMVCASCQYGKAHQLQFKESKFRAKQPLELVHSNVFGPVKQSSLGG 251

Query: 365 MRYMVTFIDDFSK-----------------WTPESEKSTKDEKSFKEGSKEEISQ----- 424
           MRYMVT IDDFS                  WTPESEKSTKDEKSFKEGSKEEISQ     
Sbjct: 252 MRYMVTLIDDFSSGRCYASRNVIFDEASSWWTPESEKSTKDEKSFKEGSKEEISQYGLDY 311

Query: 425 -------------------------------VQQASIKAEEENDEDEEEQLRTQSP--WK 484
                                          V+ A +  E + D      +  + P  +K
Sbjct: 312 DETLGPVAKLTTIRVLLALATCKDWKLWKMDVKNAFLNGELDRD------IYMEQPKGFK 371

Query: 485 SGIHNQEPQLRRKALYGLKQVPRAWYGNIAEFLIESGFVVASVDSSLFVKAQNSKVAIIL 544
             IH+    + +  +YGLKQVPRAWYG IA+FL+ES F V S DSSLFVKAQ+SKVAIIL
Sbjct: 372 DKIHHD--YVCKLRIYGLKQVPRAWYGKIAKFLVESSFTVVSADSSLFVKAQDSKVAIIL 431

Query: 545 VYVDDLIITGDHIEEVRQIKQNLLIRFEMKELGELKNFLGLEIEYSEKGLFLGQQKYVKD 547
           VY+D+LIITGDHI+E RQIKQNLL+RFEMKELGELK+FLGLE+EYSEKGLFLGQQKYVKD
Sbjct: 432 VYMDNLIITGDHIDEARQIKQNLLVRFEMKELGELKHFLGLEMEYSEKGLFLGQQKYVKD 451

[Close]

BLAST of MELO.jh101783.1 vs. ExPASy TrEMBL
Match: A0A5D3BUX0 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold121G001130 PE=4 SV=1)

HSP 1 Score: 445 bits (1144), Expect = 4.06e-148
Identity = 273/481 (56.76%), Postives = 306/481 (63.62%), Query Frame = 0


Query: 125 PTPQSTSNVVENKALALHAEE-----------------------LQSTIEYKGNRVFVTA 184
           P PQSTSNVVEN+ LALHAEE                       LQ+ IEYKG+RV VTA
Sbjct: 77  PNPQSTSNVVENEVLALHAEEVNYENDWIVDSGCSNHMTRDKRKLQNIIEYKGSRVVVTA 136

Query: 185 NNSKLLIAHVGKTMIVPRSNSNQVELDNVFYVLEMKKNLVSVSQLTSASNFIVFGSNNVK 244
           NNSKL IAHVGKTMIVPRSNSNQVELDNVFYV  MKKNLVS+ QLTSA NF+VFG     
Sbjct: 137 NNSKLPIAHVGKTMIVPRSNSNQVELDNVFYVPGMKKNLVSIPQLTSAINFVVFGPEKS- 196

Query: 245 VYHNLKVSGTPLMEGRRMDSIYVMSAETTYINKMQKNETADLWHARLGHVSYSKLKTIIN 304
                                                             SYSKLKTIIN
Sbjct: 197 --------------------------------------------------SYSKLKTIIN 256

Query: 305 KFMLKGLPQLDIREDMVCVGCQYGKAHQRPFKEFKFRAKQPLELVHSDVFGLVKQSSISG 364
           KFMLKGLPQLDIREDMVCV CQYGKAHQ  FKE KFRAKQPLELVHS+VFG VKQSS+ G
Sbjct: 257 KFMLKGLPQLDIREDMVCVSCQYGKAHQLQFKESKFRAKQPLELVHSNVFGPVKQSSLGG 316

Query: 365 MRYMVTFIDDFSKWT-----------------------PESEKST----------KDEKS 424
           MRYMVT IDDFS+ T                       P ++ +T          KD K 
Sbjct: 317 MRYMVTLIDDFSRTTIVEINQNKKTKFQYGLDYDETLGPVAKFTTIRVLLALATCKDSKL 376

Query: 425 FKEGSKEEISQVQQASIKAEEENDEDEEEQLRTQSP--WKSGIHNQEPQLRRKALYGLKQ 484
           +K         V+ A +  E + D      +  + P  +K  IH+    + +  +YGLKQ
Sbjct: 377 WK-------MDVKNAFLNEEFDRD------ICIEQPKGFKDKIHHD--YVCKLRIYGLKQ 436

Query: 485 VPRAWYGNIAEFLIESGFVVASVDSSLFVKAQNSKVAIILVYVDDLIITGDHIEEVRQIK 544
           VPRAWYG IA+FL+ES F V S DSSLFVKAQ+SKVAIILVY+D+LIITGDHI++ RQIK
Sbjct: 437 VPRAWYGKIAKFLVESSFTVVSADSSLFVKAQDSKVAIILVYMDNLIITGDHIDKARQIK 491

Query: 545 QNLLIRFEMKELGELKNFLGLEIEYSEKGLFLGQQKYVKDLLQKYGMSECKSISTPMEVN 547
           QNLL+RFEMKELGELK+FLGLE+EYSEKGLFLGQQKYVKDLLQKY MS+CK ISTPMEVN
Sbjct: 497 QNLLVRFEMKELGELKHFLGLEMEYSEKGLFLGQQKYVKDLLQKYDMSDCKKISTPMEVN 491

[Close]

BLAST of MELO.jh101783.1 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 107.5 bits (267), Expect = 3.7e-23
Identity = 59/147 (40.14%), Postives = 85/147 (57.82%), Query Frame = 0


Query: 418 RKALYGLKQVPRAWYGNIAEFLIESGFVVASVDSSLFVKAQNSKVAIILVYVDDLIITGD 477
           +K++YGLKQ  R W+   +  LI  GFV +  D + F+K   +    +LVYVDD+II  +
Sbjct: 233 KKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSN 292

Query: 478 HIEEVRQIKQNLLIRFEMKELGELKNFLGLEIEYSEKGLFLGQQKYVKDLLQKYGMSECK 537
           +   V ++K  L   F++++LG LK FLGLEI  S  G+ + Q+KY  DLL + G+  CK
Sbjct: 293 NDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCK 352

Query: 538 SISTPMEVNKKFRMHEGKDLADPTMYR 565
             S PM+ +  F  H G D  D   YR
Sbjct: 353 PSSVPMDPSVTFSAHSGGDFVDAKAYR 379

[Close]

BLAST of MELO.jh101783.1 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 66.6 bits (161), Expect = 7.2e-11
Identity = 36/100 (36.00%), Postives = 57/100 (57.00%), Query Frame = 0


Query: 465 ILVYVDDLIITGDHIEEVRQIKQNLLIRFEMKELGELKNFLGLEIEYSEKGLFLGQQKYV 524
           +L+YVDD+++TG     +  +   L   F MK+LG +  FLG++I+    GLFL Q KY 
Sbjct: 3   LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62

Query: 525 KDLLQKYGMSECKSISTPMEVNKKFRMHEGKDLADPTMYR 565
           + +L   GM +CK +STP+ +     +   K   DP+ +R
Sbjct: 63  EQILNNAGMLDCKPMSTPLPLKLNSSVSTAK-YPDPSDFR 101

[Close]

BLAST of MELO.jh101783.1 vs. TAIR 10
Match: ATMG00300.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 62.4 bits (150), Expect = 1.4e-09
Identity = 36/104 (34.62%), Postives = 57/104 (54.81%), Query Frame = 0


Query: 233 LMEGRRMDSIYVM--SAETTYIN--KMQKNETADLWHARLGHVSYSKLKTIINKFMLKGL 292
           +++G R DS+Y++  S ET   N  +  K+ET  LWH+RL H+S   ++ ++ K  L   
Sbjct: 38  ILKGNRHDSLYILQGSVETGESNLAETAKDETR-LWHSRLAHMSQRGMELLVKKGFLDSS 97

Query: 293 PQLDIREDMVCVGCQYGKAHQRPFKEFKFRAKQPLELVHSDVFG 333
               ++    C  C YGK H+  F   +   K PL+ VHSD++G
Sbjct: 98  KVSSLK---FCEDCIYGKTHRVNFSTGQHTTKNPLDYVHSDLWG 137

The following BLAST results are available for this feature:

BLAST of MELO.jh101783.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0046986.1	7.74e-227	50.78	Integrase, catalytic core [Cucumis melo var. makuwa] >TYK04797.1 Integrase, cata...	[more]
TYK22269.1	4.57e-192	76.30	Integrase, catalytic core [Cucumis melo var. makuwa]	[more]
KAA0033603.1	6.86e-169	98.81	Integrase, catalytic core [Cucumis melo var. makuwa]	[more]
KAA0035381.1	3.61e-160	57.68	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
TYK03493.1	8.38e-148	56.76	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]

BLAST of MELO.jh101783.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	3.5e-26	43.54	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	1.0e-25	42.86	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P04146	2.0e-18	37.01	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P10978	4.4e-13	30.00	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P92519	1.0e-09	36.00	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of MELO.jh101783.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TYD2	3.75e-227	50.78	Integrase, catalytic core OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A5D3DG87	2.21e-192	76.30	Integrase, catalytic core OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A5A7ST06	3.32e-169	98.81	Integrase, catalytic core OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A5A7T1C6	1.75e-160	57.68	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A5D3BUX0	4.06e-148	56.76	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]

BLAST of MELO.jh101783.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	3.7e-23	40.14	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	7.2e-11	36.00	DNA/RNA polymerases superfamily protein	[more]
ATMG00300.1	1.4e-09	34.62	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 370..397
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 358..377
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 358..374
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 382..409
None	No IPR available	PANTHER	PTHR11439:SF351	CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 8	coord: 416..552
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 416..552
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 399..544 e-value: 4.0E-31 score: 108.5
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 256..307 e-value: 5.7E-14 score: 51.7
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 315..382 e-value: 2.0E-5 score: 26.2
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 418..523

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO.jh101783.1.t1	MELO.jh101783.1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding