MELO.jh101629.1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh101629.1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Reverse transcriptase
Location	chr05: 12302365 .. 12304252 (+)
RNA-Seq Expression	MELO.jh101629.1
Synteny	MELO.jh101629.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGTCCCGCTTTGCTCCCGATATGGTAAGGGATGAGGCTGCCAGGACGGAGAAATTCGTTAGAGGACTCAGGCTAGACCTTCAGGGCATTGTCAGAGCCCTCCGCCCAGCCACGCATGCTGATGCACTACGTATAGCACTGGATTTGAGCCTGCCTGAGAGAGCCGATGCGTCTAAGGCTGCCGGCAGAGGGTCAGCCTTGGGACAGAAGAGAAAGGTTGAGACGCAGCCTGACGTAGCACCGCAGCGAACACTGAGGTCAGGAGGTGTCTTCCAGAGACACCGACGGGAGCTTGCAGCAGCCGGGAGGACTCTGAGAGAGCTACCCGCTTGTACTACCTGCGGGAGAGTCCACGGAGGTCGTTGCTTGGCTGGAAGTGGAGTCTGCTTCAGGTGCAGACAGCCGGGGCACACTGCTGATATGTGTCCTCGGAAACCTTTTGAGACGACACCGCCCAGCGTCGCTGAGGGGAGAGTTTTCGCCACTACCCGGCAGGAGGCCGAGCGAGCTGGCACTGTGGTGACAGGTACGCTCCCAATTTTGGGGCATTATGCTTTTGTGCTATTTGACTCTGGGTCATCCCACTCGTTTATATCCTCCGTTTTCGTTCAGCATGTGGGTTTGGAGGTAGAGCCTTTGGGTAGTGTTTTGTCGGTTTCTACTCCATCTGGGGAGGTCCTGTTGTCCAAAGAACAAATAAAGGCATGTCGGGTAGAGATAGCGAATCGTATGTTAGACGTGACCTTACTAGTGTTAGACATGCAGGACTTTGACGTGATACTAGGCATGGATTGGCTGTCAGCCAACCATGCAAATATAGACTGTTTTGGCAAGGAAGTTGTCTTTAACCCTCCCTCCGAGGCTAGCTTCAAATTCAGGGGGGCAGGCATGGTATGTATACCCAAGGTCATCTCAGCCATGAAGGCTAGTAAACTACTTAGCCAGGGAACTTGGGGCATCTTGGCAAGCGTGGTGGATGTGAGAGAGCCAGAAGTTTCCCTATCTTCCGAACCAGTGGTAGAGAGAGTCGCGTTTTCCCAGACGAACTTCCAGGGACTTCCGCCTCCCCCAGAAAGATGCTATCGTGATCGAGTTAGAGCCGGGCACTGCCCCAATCTCGAGGGCCCCTTACAGAATGGCTCCAGCCGAGCTAAAGGAGTTGAAGGTCCAGTTACAGGAGTTGCTGGACAAAGGCTTCATCCGGCCCAGTGTGTCGCCTTGGGGAGCCCCAGTATTGTTCGTGAAGAAGAAGGATGGGTCGATGCGCCTTTGTATTGACTACCGAGAGCTGAACAAGGTGACAGTCAAAAACCGCTACCCCTTGCCCAGGATTGATGACCTGTTCGATCAGTTGCAGGAAGCCACCGTCTTCTCCAAGATCGACCTGCGATCAGGCTATCACCAGTTGAGGATTAGGGACGGTGACATCCCCAAGACGGCCTTTCGATCGAGGTACGGACATTACGAATTCGTTGTGATGTCTTTCGGCTTGACTAACGCTCCTGCAGTATTCATGGATCTGATGAACAGGGTGTTTAAGGAGTTTCTAGACTCGTTCGTCATAGTCTTCATTGACGACATCCTCATTTACTCAAAAACTGAGGCGGAGCACGAGGAGCACCTACACCAGGTTTTGGAGACCCTTAGAGCCAACAAGTTGTATGCCAAGTTCTCCAAGTGTGAATTCTGGTTAAGGAAGGTGACGTTTCTTGGCCACGTGGTTTCCAGTGAGGGAGTTTCAGTAGATCCCGCAAAGATTGAAGCAGTGACTAACTGGACCCGGCCGTCCACGGTTAGTGAAATTCGAAGTTTTCTGGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCATTACGCCGACCAGTTGA

mRNA sequence

ATGCTGTCCCGCTTTGCTCCCGATATGGTAAGGGATGAGGCTGCCAGGACGGAGAAATTCGTTAGAGGACTCAGGCTAGACCTTCAGGGCATTGTCAGAGCCCTCCGCCCAGCCACGCATGCTGATGCACTACGTATAGCACTGGATTTGAGCCTGCCTGAGAGAGCCGATGCGTCTAAGGCTGCCGGCAGAGGGTCAGCCTTGGGACAGAAGAGAAAGGTTGAGACGCAGCCTGACGTAGCACCGCAGCGAACACTGAGGTCAGGAGGTGTCTTCCAGAGACACCGACGGGAGCTTGCAGCAGCCGGGAGGACTCTGAGAGAGCTACCCGCTTGTACTACCTGCGGGAGAGTCCACGGAGGTCGTTGCTTGGCTGGAAGTGGAGTCTGCTTCAGGTGCAGACAGCCGGGGCACACTGCTGATATGTGTCCTCGGAAACCTTTTGAGACGACACCGCCCAGCGTCGCTGAGGGGAGAGTTTTCGCCACTACCCGGCAGGAGGCCGAGCGAGCTGGCACTGTGGTGACAGGTACGCTCCCAATTTTGGGGCATTATGCTTTTGTGCTATTTGACTCTGGGTCATCCCACTCGTTTATATCCTCCGTTTTCGTTCAGCATGTGGGTTTGGAGGTAGAGCCTTTGGGTAGTGTTTTGTCGGTTTCTACTCCATCTGGGGAGGTCCTGTTGTCCAAAGAACAAATAAAGGCATGTCGGGTAGAGATAGCGAATCGTATGTTAGACGTGACCTTACTAGTGTTAGACATGCAGGACTTTGACGTGATACTAGGCATGGATTGGCTGTCAGCCAACCATGCAAATATAGACTGTTTTGGCAAGGAAGTTGTCTTTAACCCTCCCTCCGAGGCTAGCTTCAAATTCAGGGGGGCAGGCATGGTATGTATACCCAAGGTCATCTCAGCCATGAAGGCTAGTAAACTACTTAGCCAGGGAACTTGGGGCATCTTGGCAAGCGTGGTGGATGTGAGAGAGCCAGAAGTTTCCCTATCTTCCGAACCAGTGGTAGAGAGAGTCGCGTTTTCCCAGACGAACTTCCAGGGACTTCCGCCTCCCCCAGAAAGATGCTATCGTGATCGAGTTAGAGCCGGGCACTGCCCCAATCTCGAGGGCCCCTTACAGAATGGCTCCAGCCGAGCTAAAGGAGTTGAAGGTCCAGTTACAGGAGTTGCTGGACAAAGGCTTCATCCGGCCCAGTGTGTCGCCTTGGGGAGCCCCAGTATTGTTCGTGAAGAAGAAGGATGGGTCGATGCGCCTTTGATTGATGACCTGTTCGATCAGTTGCAGGAAGCCACCGTCTTCTCCAAGATCGACCTGCGATCAGGCTATCACCAGTTGAGGATTAGGGACGGTGACATCCCCAAGACGGCCTTTCGATCGAGGTACGGACATTACGAATTCGTTGTGATGTCTTTCGGCTTGACTAACGCTCCTGCAGTATTCATGGATCTGATGAACAGGGTGTTTAAGGAGTTTCTAGACTCGTTCGTCATAGTCTTCATTGACGACATCCTCATTTACTCAAAAACTGAGGCGGAGCACGAGGAGCACCTACACCAGGTTTTGGAGACCCTTAGAGCCAACAAGTTGTATGCCAAGTTCTCCAAGTGTGAATTCTGGTTAAGGAAGGTGACGTTTCTTGGCCACGTGGTTTCCAGTGAGGGAGTTTCAGTAGATCCCGCAAAGATTGAAGCAGTGACTAACTGGACCCGGCCGTCCACGGTTAGTGAAATTCGAAGTTTTCTGGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCATTACGCCGACCAGTTGA

Coding sequence (CDS)

ATGCTGTCCCGCTTTGCTCCCGATATGGTAAGGGATGAGGCTGCCAGGACGGAGAAATTCGTTAGAGGACTCAGGCTAGACCTTCAGGGCATTGTCAGAGCCCTCCGCCCAGCCACGCATGCTGATGCACTACGTATAGCACTGGATTTGAGCCTGCCTGAGAGAGCCGATGCGTCTAAGGCTGCCGGCAGAGGGTCAGCCTTGGGACAGAAGAGAAAGGTTGAGACGCAGCCTGACGTAGCACCGCAGCGAACACTGAGGTCAGGAGGTGTCTTCCAGAGACACCGACGGGAGCTTGCAGCAGCCGGGAGGACTCTGAGAGAGCTACCCGCTTGTACTACCTGCGGGAGAGTCCACGGAGGTCGTTGCTTGGCTGGAAGTGGAGTCTGCTTCAGGTGCAGACAGCCGGGGCACACTGCTGATATGTGTCCTCGGAAACCTTTTGAGACGACACCGCCCAGCGTCGCTGAGGGGAGAGTTTTCGCCACTACCCGGCAGGAGGCCGAGCGAGCTGGCACTGTGGTGACAGGTACGCTCCCAATTTTGGGGCATTATGCTTTTGTGCTATTTGACTCTGGGTCATCCCACTCGTTTATATCCTCCGTTTTCGTTCAGCATGTGGGTTTGGAGGTAGAGCCTTTGGGTAGTGTTTTGTCGGTTTCTACTCCATCTGGGGAGGTCCTGTTGTCCAAAGAACAAATAAAGGCATGTCGGGTAGAGATAGCGAATCGTATGTTAGACGTGACCTTACTAGTGTTAGACATGCAGGACTTTGACGTGATACTAGGCATGGATTGGCTGTCAGCCAACCATGCAAATATAGACTGTTTTGGCAAGGAAGTTGTCTTTAACCCTCCCTCCGAGGCTAGCTTCAAATTCAGGGGGGCAGGCATGGTATGTATACCCAAGGTCATCTCAGCCATGAAGGCTAGTAAACTACTTAGCCAGGGAACTTGGGGCATCTTGGCAAGCGTGGTGGATGTGAGAGAGCCAGAAGTTTCCCTATCTTCCGAACCAGTGGTAGAGAGAGTCGCGTTTTCCCAGACGAACTTCCAGGGACTTCCGCCTCCCCCAGAAAGATGCTATCGTGATCGAGTTAGAGCCGGGCACTGCCCCAATCTCGAGGGCCCCTTACAGAATGGCTCCAGCCGAGCTAAAGGAGTTGAAGGTCCAGTTACAGGAGTTGCTGGACAAAGGCTTCATCCGGCCCAGTGTGTCGCCTTGGGGAGCCCCAGTATTGTTCGTGAAGAAGAAGGATGGGTCGATGCGCCTTTGATTGATGACCTGTTCGATCAGTTGCAGGAAGCCACCGTCTTCTCCAAGATCGACCTGCGATCAGGCTATCACCAGTTGAGGATTAGGGACGGTGACATCCCCAAGACGGCCTTTCGATCGAGGTACGGACATTACGAATTCGTTGTGATGTCTTTCGGCTTGACTAACGCTCCTGCAGTATTCATGGATCTGATGAACAGGGTGTTTAAGGAGTTTCTAGACTCGTTCGTCATAGTCTTCATTGACGACATCCTCATTTACTCAAAAACTGAGGCGGAGCACGAGGAGCACCTACACCAGGTTTTGGAGACCCTTAGAGCCAACAAGTTGTATGCCAAGTTCTCCAAGTGTGAATTCTGGTTAAGGAAGGTGACGTTTCTTGGCCACGTGGTTTCCAGTGAGGGAGTTTCAGTAGATCCCGCAAAGATTGAAGCAGTGACTAACTGGACCCGGCCGTCCACGGTTAGTGAAATTCGAAGTTTTCTGGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCATTACGCCGACCAGTTGA

Protein sequence

MLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKPFETTPPSVAEGRVFATTRQEAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVERVAFSQTNFQGLPPPPERCYRDRVRAGHCPNLEGPLQNGSSRAKGVEGPVTGVAGQRLHPAQCVALGSPSIVREEEGWVDAPLIDDLFDQLQEATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIAITPTS

Homology

[Close]

BLAST of MELO.jh101629.1 vs. NCBI nr
Match: KAA0031437.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1001 bits (2589), Expect = 0.0
Identity = 530/627 (84.53%), Postives = 549/627 (87.56%), Query Frame = 0


Query: 1   MLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASK 60
           MLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASK
Sbjct: 171 MLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASK 230

Query: 61  AAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHG 120
           AAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHG
Sbjct: 231 AAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHG 290

Query: 121 GRCLAGSGVCFRCRQPGHTADMCPRKPFETTPP---SVAEGRVFATTRQEAERAGTVVTG 180
           GRCLAGSGVCFRCRQPGHTADMCPRKPFETTPP   +  +GRVFATTRQEAERAGTVVTG
Sbjct: 291 GRCLAGSGVCFRCRQPGHTADMCPRKPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTG 350

Query: 181 TLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKAC 240
           TLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKAC
Sbjct: 351 TLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKAC 410

Query: 241 RVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSEASFKFRGAG 300
           RVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDC+GKEVVFNPPSEASFKFRGAG
Sbjct: 411 RVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAG 470

Query: 301 MVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVV-ERVAFSQTNFQGLPP 360
           MVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVV E          GLPP
Sbjct: 471 MVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPP 530

Query: 361 PPERCYRDRVRAGHCPNLEGPLQNGSSRAKGVEGPVTGVAGQRLHPAQCVALGSPSI-VR 420
           P E  +   +  G  P    P +   +  K ++  +  +  +          G+P + V+
Sbjct: 531 PREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVK 590

Query: 421 EEEGWV------------------DAPLIDDLFDQLQEATVFSKIDLRSGYHQLRIRDGD 480
           +++G +                    P IDDLFDQLQ ATVFSKIDLRSGYHQLRIRDGD
Sbjct: 591 KKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGD 650

Query: 481 IPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEA 540
           IPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEA
Sbjct: 651 IPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEA 710

Query: 541 EHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRP 600
           EHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRP
Sbjct: 711 EHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRP 770

Query: 601 STVSEIRSFLGLAGYYRRFVEDFSRIA 604
           STVSEIRSFLGLAGYYRRFVEDFSRIA
Sbjct: 771 STVSEIRSFLGLAGYYRRFVEDFSRIA 797

[Close]

BLAST of MELO.jh101629.1 vs. NCBI nr
Match: KAA0033825.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1001 bits (2589), Expect = 0.0
Identity = 530/627 (84.53%), Postives = 549/627 (87.56%), Query Frame = 0


Query: 1    MLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASK 60
            MLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASK
Sbjct: 835  MLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASK 894

Query: 61   AAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHG 120
            AAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHG
Sbjct: 895  AAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHG 954

Query: 121  GRCLAGSGVCFRCRQPGHTADMCPRKPFETTPP---SVAEGRVFATTRQEAERAGTVVTG 180
            GRCLAGSGVCFRCRQPGHTADMCPRKPFETTPP   +  +GRVFATTRQEAERAGTVVTG
Sbjct: 955  GRCLAGSGVCFRCRQPGHTADMCPRKPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTG 1014

Query: 181  TLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKAC 240
            TLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKAC
Sbjct: 1015 TLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKAC 1074

Query: 241  RVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSEASFKFRGAG 300
            RVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDC+GKEVVFNPPSEASFKFRGAG
Sbjct: 1075 RVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAG 1134

Query: 301  MVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVV-ERVAFSQTNFQGLPP 360
            MVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVV E          GLPP
Sbjct: 1135 MVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPP 1194

Query: 361  PPERCYRDRVRAGHCPNLEGPLQNGSSRAKGVEGPVTGVAGQRLHPAQCVALGSPSI-VR 420
            P E  +   +  G  P    P +   +  K ++  +  +  +          G+P + V+
Sbjct: 1195 PREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVK 1254

Query: 421  EEEGWV------------------DAPLIDDLFDQLQEATVFSKIDLRSGYHQLRIRDGD 480
            +++G +                    P IDDLFDQLQ ATVFSKIDLRSGYHQLRIRDGD
Sbjct: 1255 KKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGD 1314

Query: 481  IPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEA 540
            IPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEA
Sbjct: 1315 IPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEA 1374

Query: 541  EHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRP 600
            EHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRP
Sbjct: 1375 EHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRP 1434

Query: 601  STVSEIRSFLGLAGYYRRFVEDFSRIA 604
            STVSEIRSFLGLAGYYRRFVEDFSRIA
Sbjct: 1435 STVSEIRSFLGLAGYYRRFVEDFSRIA 1461

[Close]

BLAST of MELO.jh101629.1 vs. NCBI nr
Match: KAA0032535.1 (pol protein [Cucumis melo var. makuwa] >KAA0033280.1 pol protein [Cucumis melo var. makuwa] >KAA0035195.1 pol protein [Cucumis melo var. makuwa] >KAA0040656.1 pol protein [Cucumis melo var. makuwa] >KAA0046921.1 pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1001 bits (2589), Expect = 0.0
Identity = 530/627 (84.53%), Postives = 549/627 (87.56%), Query Frame = 0


Query: 1   MLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASK 60
           MLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASK
Sbjct: 230 MLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASK 289

Query: 61  AAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHG 120
           AAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHG
Sbjct: 290 AAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHG 349

Query: 121 GRCLAGSGVCFRCRQPGHTADMCPRKPFETTPP---SVAEGRVFATTRQEAERAGTVVTG 180
           GRCLAGSGVCFRCRQPGHTADMCPRKPFETTPP   +  +GRVFATTRQEAERAGTVVTG
Sbjct: 350 GRCLAGSGVCFRCRQPGHTADMCPRKPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTG 409

Query: 181 TLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKAC 240
           TLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKAC
Sbjct: 410 TLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKAC 469

Query: 241 RVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSEASFKFRGAG 300
           RVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDC+GKEVVFNPPSEASFKFRGAG
Sbjct: 470 RVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAG 529

Query: 301 MVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVV-ERVAFSQTNFQGLPP 360
           MVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVV E          GLPP
Sbjct: 530 MVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPP 589

Query: 361 PPERCYRDRVRAGHCPNLEGPLQNGSSRAKGVEGPVTGVAGQRLHPAQCVALGSPSI-VR 420
           P E  +   +  G  P    P +   +  K ++  +  +  +          G+P + V+
Sbjct: 590 PREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVK 649

Query: 421 EEEGWV------------------DAPLIDDLFDQLQEATVFSKIDLRSGYHQLRIRDGD 480
           +++G +                    P IDDLFDQLQ ATVFSKIDLRSGYHQLRIRDGD
Sbjct: 650 KKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGD 709

Query: 481 IPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEA 540
           IPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEA
Sbjct: 710 IPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEA 769

Query: 541 EHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRP 600
           EHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRP
Sbjct: 770 EHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRP 829

Query: 601 STVSEIRSFLGLAGYYRRFVEDFSRIA 604
           STVSEIRSFLGLAGYYRRFVEDFSRIA
Sbjct: 830 STVSEIRSFLGLAGYYRRFVEDFSRIA 856

[Close]

BLAST of MELO.jh101629.1 vs. NCBI nr
Match: KAA0025242.1 (pol protein [Cucumis melo var. makuwa] >KAA0036610.1 pol protein [Cucumis melo var. makuwa] >KAA0036783.1 pol protein [Cucumis melo var. makuwa] >KAA0041437.1 pol protein [Cucumis melo var. makuwa] >KAA0042939.1 pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1001 bits (2589), Expect = 0.0
Identity = 530/627 (84.53%), Postives = 549/627 (87.56%), Query Frame = 0


Query: 1   MLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASK 60
           MLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASK
Sbjct: 230 MLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASK 289

Query: 61  AAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHG 120
           AAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHG
Sbjct: 290 AAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHG 349

Query: 121 GRCLAGSGVCFRCRQPGHTADMCPRKPFETTPP---SVAEGRVFATTRQEAERAGTVVTG 180
           GRCLAGSGVCFRCRQPGHTADMCPRKPFETTPP   +  +GRVFATTRQEAERAGTVVTG
Sbjct: 350 GRCLAGSGVCFRCRQPGHTADMCPRKPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTG 409

Query: 181 TLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKAC 240
           TLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKAC
Sbjct: 410 TLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKAC 469

Query: 241 RVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSEASFKFRGAG 300
           RVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDC+GKEVVFNPPSEASFKFRGAG
Sbjct: 470 RVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAG 529

Query: 301 MVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVV-ERVAFSQTNFQGLPP 360
           MVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVV E          GLPP
Sbjct: 530 MVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPP 589

Query: 361 PPERCYRDRVRAGHCPNLEGPLQNGSSRAKGVEGPVTGVAGQRLHPAQCVALGSPSI-VR 420
           P E  +   +  G  P    P +   +  K ++  +  +  +          G+P + V+
Sbjct: 590 PREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVK 649

Query: 421 EEEGWV------------------DAPLIDDLFDQLQEATVFSKIDLRSGYHQLRIRDGD 480
           +++G +                    P IDDLFDQLQ ATVFSKIDLRSGYHQLRIRDGD
Sbjct: 650 KKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGD 709

Query: 481 IPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEA 540
           IPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEA
Sbjct: 710 IPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEA 769

Query: 541 EHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRP 600
           EHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRP
Sbjct: 770 EHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRP 829

Query: 601 STVSEIRSFLGLAGYYRRFVEDFSRIA 604
           STVSEIRSFLGLAGYYRRFVEDFSRIA
Sbjct: 830 STVSEIRSFLGLAGYYRRFVEDFSRIA 856

[Close]

BLAST of MELO.jh101629.1 vs. NCBI nr
Match: KAA0048546.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1001 bits (2589), Expect = 0.0
Identity = 530/627 (84.53%), Postives = 549/627 (87.56%), Query Frame = 0


Query: 1    MLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASK 60
            MLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASK
Sbjct: 552  MLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASK 611

Query: 61   AAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHG 120
            AAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHG
Sbjct: 612  AAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHG 671

Query: 121  GRCLAGSGVCFRCRQPGHTADMCPRKPFETTPP---SVAEGRVFATTRQEAERAGTVVTG 180
            GRCLAGSGVCFRCRQPGHTADMCPRKPFETTPP   +  +GRVFATTRQEAERAGTVVTG
Sbjct: 672  GRCLAGSGVCFRCRQPGHTADMCPRKPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTG 731

Query: 181  TLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKAC 240
            TLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKAC
Sbjct: 732  TLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKAC 791

Query: 241  RVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSEASFKFRGAG 300
            RVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDC+GKEVVFNPPSEASFKFRGAG
Sbjct: 792  RVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAG 851

Query: 301  MVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVV-ERVAFSQTNFQGLPP 360
            MVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVV E          GLPP
Sbjct: 852  MVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPP 911

Query: 361  PPERCYRDRVRAGHCPNLEGPLQNGSSRAKGVEGPVTGVAGQRLHPAQCVALGSPSI-VR 420
            P E  +   +  G  P    P +   +  K ++  +  +  +          G+P + V+
Sbjct: 912  PREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVK 971

Query: 421  EEEGWV------------------DAPLIDDLFDQLQEATVFSKIDLRSGYHQLRIRDGD 480
            +++G +                    P IDDLFDQLQ ATVFSKIDLRSGYHQLRIRDGD
Sbjct: 972  KKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGD 1031

Query: 481  IPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEA 540
            IPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEA
Sbjct: 1032 IPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEA 1091

Query: 541  EHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRP 600
            EHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRP
Sbjct: 1092 EHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRP 1151

Query: 601  STVSEIRSFLGLAGYYRRFVEDFSRIA 604
            STVSEIRSFLGLAGYYRRFVEDFSRIA
Sbjct: 1152 STVSEIRSFLGLAGYYRRFVEDFSRIA 1178

[Close]

BLAST of MELO.jh101629.1 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 2.1e-37
Identity = 73/181 (40.33%), Postives = 115/181 (63.54%), Query Frame = 0


Query: 424 PLIDDLFDQLQEATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAP 483
           P +D++  +L     F+ IDL  G+HQ+ +    + KTAF +++GHYE++ M FGL NAP
Sbjct: 283 PNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKNAP 342

Query: 484 AVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCE 543
           A F   MN + +  L+   +V++DDI+++S +  EH + L  V E L    L  +  KCE
Sbjct: 343 ATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLDKCE 402

Query: 544 FWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRI 603
           F  ++ TFLGHV++ +G+  +P KIEA+  +  P+   EI++FLGL GYYR+F+ +F+ I
Sbjct: 403 FLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPNFADI 462

Query: 604 A 605
           A
Sbjct: 463 A 463

[Close]

BLAST of MELO.jh101629.1 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 1.0e-36
Identity = 72/186 (38.71%), Postives = 116/186 (62.37%), Query Frame = 0


Query: 424 PLIDDLFDQLQEATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAP 483
           P +D++  +L +   F+ IDL  G+HQ+ + +  I KTAF ++ GHYE++ M FGL NAP
Sbjct: 282 PNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKSGHYEYLRMPFGLRNAP 341

Query: 484 AVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCE 543
           A F   MN + +  L+   +V++DDI+I+S +  EH   +  V   L    L  +  KCE
Sbjct: 342 ATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVFTKLADANLKLQLDKCE 401

Query: 544 FWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRI 603
           F  ++  FLGH+V+ +G+  +P K++A+ ++  P+   EIR+FLGL GYYR+F+ +++ I
Sbjct: 402 FLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFLGLTGYYRKFIPNYADI 461

Query: 604 AITPTS 610
           A   TS
Sbjct: 462 AKPMTS 467

[Close]

BLAST of MELO.jh101629.1 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 7.5e-35
Identity = 67/181 (37.02%), Postives = 115/181 (63.54%), Query Frame = 0


Query: 424 PLIDDLFDQLQEATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAP 483
           P I+     L  A  F+ +DL SG+HQ+ +++ DIPKTAF +  G YEF+ + FGL NAP
Sbjct: 199 PDINATLASLGNAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGLKNAP 258

Query: 484 AVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCE 543
           A+F  +++ + +E +     V+IDDI+++S+    H ++L  VL +L    L     K  
Sbjct: 259 AIFQRMIDDILREHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKANLQVNLEKSH 318

Query: 544 FWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRI 603
           F   +V FLG++V+++G+  DP K+ A++    P++V E++ FLG+  YYR+F++D++++
Sbjct: 319 FLDTQVEFLGYIVTADGIKADPKKVRAISEMPPPTSVKELKRFLGMTSYYRKFIQDYAKV 378

Query: 604 A 605
           A
Sbjct: 379 A 379

[Close]

BLAST of MELO.jh101629.1 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 1.3e-34
Identity = 71/180 (39.44%), Postives = 114/180 (63.33%), Query Frame = 0


Query: 424 PLIDDLFDQLQEATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAP 483
           PLI+ L  ++Q +T+F+K+DL+S YH +R+R GD  K AFR   G +E++VM +G++ AP
Sbjct: 483 PLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAP 542

Query: 484 AVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCE 543
           A F   +N +  E  +S V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCE
Sbjct: 543 AHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCE 602

Query: 544 FWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRI 603
           F   +V F+G+ +S +G +     I+ V  W +P    E+R FLG   Y R+F+   S++
Sbjct: 603 FHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQL 662

[Close]

BLAST of MELO.jh101629.1 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 1.3e-34
Identity = 71/180 (39.44%), Postives = 114/180 (63.33%), Query Frame = 0


Query: 424 PLIDDLFDQLQEATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAP 483
           PLI+ L  ++Q +T+F+K+DL+S YH +R+R GD  K AFR   G +E++VM +G++ AP
Sbjct: 483 PLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAP 542

Query: 484 AVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCE 543
           A F   +N +  E  +S V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCE
Sbjct: 543 AHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCE 602

Query: 544 FWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRI 603
           F   +V F+G+ +S +G +     I+ V  W +P    E+R FLG   Y R+F+   S++
Sbjct: 603 FHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQL 662

[Close]

BLAST of MELO.jh101629.1 vs. ExPASy TrEMBL
Match: A0A5A7UBS1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13G00110 PE=4 SV=1)

HSP 1 Score: 1001 bits (2589), Expect = 0.0
Identity = 530/627 (84.53%), Postives = 549/627 (87.56%), Query Frame = 0


Query: 1   MLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASK 60
           MLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASK
Sbjct: 230 MLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASK 289

Query: 61  AAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHG 120
           AAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHG
Sbjct: 290 AAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHG 349

Query: 121 GRCLAGSGVCFRCRQPGHTADMCPRKPFETTPP---SVAEGRVFATTRQEAERAGTVVTG 180
           GRCLAGSGVCFRCRQPGHTADMCPRKPFETTPP   +  +GRVFATTRQEAERAGTVVTG
Sbjct: 350 GRCLAGSGVCFRCRQPGHTADMCPRKPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTG 409

Query: 181 TLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKAC 240
           TLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKAC
Sbjct: 410 TLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKAC 469

Query: 241 RVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSEASFKFRGAG 300
           RVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDC+GKEVVFNPPSEASFKFRGAG
Sbjct: 470 RVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAG 529

Query: 301 MVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVV-ERVAFSQTNFQGLPP 360
           MVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVV E          GLPP
Sbjct: 530 MVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPP 589

Query: 361 PPERCYRDRVRAGHCPNLEGPLQNGSSRAKGVEGPVTGVAGQRLHPAQCVALGSPSI-VR 420
           P E  +   +  G  P    P +   +  K ++  +  +  +          G+P + V+
Sbjct: 590 PREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVK 649

Query: 421 EEEGWV------------------DAPLIDDLFDQLQEATVFSKIDLRSGYHQLRIRDGD 480
           +++G +                    P IDDLFDQLQ ATVFSKIDLRSGYHQLRIRDGD
Sbjct: 650 KKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGD 709

Query: 481 IPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEA 540
           IPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEA
Sbjct: 710 IPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEA 769

Query: 541 EHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRP 600
           EHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRP
Sbjct: 770 EHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRP 829

Query: 601 STVSEIRSFLGLAGYYRRFVEDFSRIA 604
           STVSEIRSFLGLAGYYRRFVEDFSRIA
Sbjct: 830 STVSEIRSFLGLAGYYRRFVEDFSRIA 856

[Close]

BLAST of MELO.jh101629.1 vs. ExPASy TrEMBL
Match: A0A5A7TSL0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold191G001340 PE=4 SV=1)

HSP 1 Score: 1001 bits (2589), Expect = 0.0
Identity = 530/627 (84.53%), Postives = 549/627 (87.56%), Query Frame = 0


Query: 1   MLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASK 60
           MLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASK
Sbjct: 230 MLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASK 289

Query: 61  AAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHG 120
           AAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHG
Sbjct: 290 AAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHG 349

Query: 121 GRCLAGSGVCFRCRQPGHTADMCPRKPFETTPP---SVAEGRVFATTRQEAERAGTVVTG 180
           GRCLAGSGVCFRCRQPGHTADMCPRKPFETTPP   +  +GRVFATTRQEAERAGTVVTG
Sbjct: 350 GRCLAGSGVCFRCRQPGHTADMCPRKPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTG 409

Query: 181 TLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKAC 240
           TLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKAC
Sbjct: 410 TLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKAC 469

Query: 241 RVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSEASFKFRGAG 300
           RVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDC+GKEVVFNPPSEASFKFRGAG
Sbjct: 470 RVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAG 529

Query: 301 MVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVV-ERVAFSQTNFQGLPP 360
           MVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVV E          GLPP
Sbjct: 530 MVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPP 589

Query: 361 PPERCYRDRVRAGHCPNLEGPLQNGSSRAKGVEGPVTGVAGQRLHPAQCVALGSPSI-VR 420
           P E  +   +  G  P    P +   +  K ++  +  +  +          G+P + V+
Sbjct: 590 PREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVK 649

Query: 421 EEEGWV------------------DAPLIDDLFDQLQEATVFSKIDLRSGYHQLRIRDGD 480
           +++G +                    P IDDLFDQLQ ATVFSKIDLRSGYHQLRIRDGD
Sbjct: 650 KKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGD 709

Query: 481 IPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEA 540
           IPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEA
Sbjct: 710 IPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEA 769

Query: 541 EHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRP 600
           EHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRP
Sbjct: 770 EHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRP 829

Query: 601 STVSEIRSFLGLAGYYRRFVEDFSRIA 604
           STVSEIRSFLGLAGYYRRFVEDFSRIA
Sbjct: 830 STVSEIRSFLGLAGYYRRFVEDFSRIA 856

[Close]

BLAST of MELO.jh101629.1 vs. ExPASy TrEMBL
Match: A0A5A7UBH7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G001510 PE=4 SV=1)

HSP 1 Score: 1001 bits (2589), Expect = 0.0
Identity = 530/627 (84.53%), Postives = 549/627 (87.56%), Query Frame = 0


Query: 1    MLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASK 60
            MLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASK
Sbjct: 718  MLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASK 777

Query: 61   AAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHG 120
            AAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHG
Sbjct: 778  AAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHG 837

Query: 121  GRCLAGSGVCFRCRQPGHTADMCPRKPFETTPP---SVAEGRVFATTRQEAERAGTVVTG 180
            GRCLAGSGVCFRCRQPGHTADMCPRKPFETTPP   +  +GRVFATTRQEAERAGTVVTG
Sbjct: 838  GRCLAGSGVCFRCRQPGHTADMCPRKPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTG 897

Query: 181  TLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKAC 240
            TLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKAC
Sbjct: 898  TLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKAC 957

Query: 241  RVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSEASFKFRGAG 300
            RVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDC+GKEVVFNPPSEASFKFRGAG
Sbjct: 958  RVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAG 1017

Query: 301  MVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVV-ERVAFSQTNFQGLPP 360
            MVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVV E          GLPP
Sbjct: 1018 MVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPP 1077

Query: 361  PPERCYRDRVRAGHCPNLEGPLQNGSSRAKGVEGPVTGVAGQRLHPAQCVALGSPSI-VR 420
            P E  +   +  G  P    P +   +  K ++  +  +  +          G+P + V+
Sbjct: 1078 PREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVK 1137

Query: 421  EEEGWV------------------DAPLIDDLFDQLQEATVFSKIDLRSGYHQLRIRDGD 480
            +++G +                    P IDDLFDQLQ ATVFSKIDLRSGYHQLRIRDGD
Sbjct: 1138 KKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGD 1197

Query: 481  IPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEA 540
            IPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEA
Sbjct: 1198 IPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEA 1257

Query: 541  EHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRP 600
            EHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRP
Sbjct: 1258 EHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRP 1317

Query: 601  STVSEIRSFLGLAGYYRRFVEDFSRIA 604
            STVSEIRSFLGLAGYYRRFVEDFSRIA
Sbjct: 1318 STVSEIRSFLGLAGYYRRFVEDFSRIA 1344

[Close]

BLAST of MELO.jh101629.1 vs. ExPASy TrEMBL
Match: A0A5A7SPM4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G001940 PE=4 SV=1)

HSP 1 Score: 1001 bits (2589), Expect = 0.0
Identity = 530/627 (84.53%), Postives = 549/627 (87.56%), Query Frame = 0


Query: 1   MLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASK 60
           MLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASK
Sbjct: 171 MLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASK 230

Query: 61  AAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHG 120
           AAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHG
Sbjct: 231 AAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHG 290

Query: 121 GRCLAGSGVCFRCRQPGHTADMCPRKPFETTPP---SVAEGRVFATTRQEAERAGTVVTG 180
           GRCLAGSGVCFRCRQPGHTADMCPRKPFETTPP   +  +GRVFATTRQEAERAGTVVTG
Sbjct: 291 GRCLAGSGVCFRCRQPGHTADMCPRKPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTG 350

Query: 181 TLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKAC 240
           TLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKAC
Sbjct: 351 TLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKAC 410

Query: 241 RVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSEASFKFRGAG 300
           RVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDC+GKEVVFNPPSEASFKFRGAG
Sbjct: 411 RVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAG 470

Query: 301 MVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVV-ERVAFSQTNFQGLPP 360
           MVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVV E          GLPP
Sbjct: 471 MVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPP 530

Query: 361 PPERCYRDRVRAGHCPNLEGPLQNGSSRAKGVEGPVTGVAGQRLHPAQCVALGSPSI-VR 420
           P E  +   +  G  P    P +   +  K ++  +  +  +          G+P + V+
Sbjct: 531 PREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVK 590

Query: 421 EEEGWV------------------DAPLIDDLFDQLQEATVFSKIDLRSGYHQLRIRDGD 480
           +++G +                    P IDDLFDQLQ ATVFSKIDLRSGYHQLRIRDGD
Sbjct: 591 KKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGD 650

Query: 481 IPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEA 540
           IPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEA
Sbjct: 651 IPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEA 710

Query: 541 EHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRP 600
           EHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRP
Sbjct: 711 EHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRP 770

Query: 601 STVSEIRSFLGLAGYYRRFVEDFSRIA 604
           STVSEIRSFLGLAGYYRRFVEDFSRIA
Sbjct: 771 STVSEIRSFLGLAGYYRRFVEDFSRIA 797

[Close]

BLAST of MELO.jh101629.1 vs. ExPASy TrEMBL
Match: A0A5A7SXB5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1735G00220 PE=4 SV=1)

HSP 1 Score: 1001 bits (2589), Expect = 0.0
Identity = 530/627 (84.53%), Postives = 549/627 (87.56%), Query Frame = 0


Query: 1    MLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASK 60
            MLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASK
Sbjct: 835  MLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASK 894

Query: 61   AAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHG 120
            AAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHG
Sbjct: 895  AAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHG 954

Query: 121  GRCLAGSGVCFRCRQPGHTADMCPRKPFETTPP---SVAEGRVFATTRQEAERAGTVVTG 180
            GRCLAGSGVCFRCRQPGHTADMCPRKPFETTPP   +  +GRVFATTRQEAERAGTVVTG
Sbjct: 955  GRCLAGSGVCFRCRQPGHTADMCPRKPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTG 1014

Query: 181  TLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKAC 240
            TLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKAC
Sbjct: 1015 TLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKAC 1074

Query: 241  RVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSEASFKFRGAG 300
            RVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDC+GKEVVFNPPSEASFKFRGAG
Sbjct: 1075 RVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAG 1134

Query: 301  MVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVV-ERVAFSQTNFQGLPP 360
            MVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVV E          GLPP
Sbjct: 1135 MVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPP 1194

Query: 361  PPERCYRDRVRAGHCPNLEGPLQNGSSRAKGVEGPVTGVAGQRLHPAQCVALGSPSI-VR 420
            P E  +   +  G  P    P +   +  K ++  +  +  +          G+P + V+
Sbjct: 1195 PREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVK 1254

Query: 421  EEEGWV------------------DAPLIDDLFDQLQEATVFSKIDLRSGYHQLRIRDGD 480
            +++G +                    P IDDLFDQLQ ATVFSKIDLRSGYHQLRIRDGD
Sbjct: 1255 KKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGD 1314

Query: 481  IPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEA 540
            IPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEA
Sbjct: 1315 IPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEA 1374

Query: 541  EHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRP 600
            EHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRP
Sbjct: 1375 EHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRP 1434

Query: 601  STVSEIRSFLGLAGYYRRFVEDFSRIA 604
            STVSEIRSFLGLAGYYRRFVEDFSRIA
Sbjct: 1435 STVSEIRSFLGLAGYYRRFVEDFSRIA 1461

[Close]

BLAST of MELO.jh101629.1 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 88.2 bits (217), Expect = 2.5e-17
Identity = 39/84 (46.43%), Postives = 55/84 (65.48%), Query Frame = 0


Query: 522 HLHQVLETLRANKLYAKFSKCEFWLRKVTFLG--HVVSSEGVSVDPAKIEAVTNWTRPST 581
           HL  VL+    ++ YA   KC F   ++ +LG  H++S EGVS DPAK+EA+  W  P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 582 VSEIRSFLGLAGYYRRFVEDFSRI 604
            +E+R FLGL GYYRRFV+++ +I
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKI 86

The following BLAST results are available for this feature:

BLAST of MELO.jh101629.1 vs. NCBI nr


Match Name	Identity	Description
KAA0031437.1	84.53	pol protein [Cucumis melo var. makuwa]	[more]
KAA0033825.1	84.53	pol protein [Cucumis melo var. makuwa]	[more]
KAA0032535.1	84.53	pol protein [Cucumis melo var. makuwa] >KAA0033280.1 pol protein [Cucumis melo v...	[more]
KAA0025242.1	84.53	pol protein [Cucumis melo var. makuwa] >KAA0036610.1 pol protein [Cucumis melo v...	[more]
KAA0048546.1	84.53	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of MELO.jh101629.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P04323	2.1e-37	40.33	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P20825	1.0e-36	38.71	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
Q8I7P9	7.5e-35	37.02	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]
P0CT41	1.3e-34	39.44	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	1.3e-34	39.44	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of MELO.jh101629.1 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A5A7UBS1	84.53	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13...	[more]
A0A5A7TSL0	84.53	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19...	[more]
A0A5A7UBH7	84.53	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60...	[more]
A0A5A7SPM4	84.53	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13...	[more]
A0A5A7SXB5	84.53	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17...	[more]

BLAST of MELO.jh101629.1 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	2.5e-17	46.43	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 129..145 e-value: 0.0083 score: 24.1
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 130..145 score: 9.207683
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 566..608 e-value: 2.7E-13 score: 51.7
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 423..556 e-value: 8.1E-54 score: 184.1
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 430..555 e-value: 4.8E-22 score: 78.6
None	No IPR available	PFAM	PF08284	RVP_2	coord: 155..286 e-value: 2.5E-41 score: 140.7
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 449..481 e-value: 8.1E-54 score: 184.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..85
None	No IPR available	PANTHER	PTHR24559:SF324	TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEIN	coord: 424..603
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 424..603
None	No IPR available	CDD	cd00303	retropepsin_like	coord: 203..267 e-value: 5.06021E-11 score: 57.3464
None	No IPR available	CDD	cd01647	RT_LTR	coord: 424..556 e-value: 2.59251E-67 score: 215.152
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 178..293 e-value: 4.2E-21 score: 77.1
IPR021109	Aspartic peptidase domain superfamily	SUPERFAMILY	50630	Acid proteases	coord: 178..275
IPR001969	Aspartic peptidase, active site	PROSITE	PS00141	ASP_PROTEASE	coord: 188..199
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 422..604

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO.jh101629.1.t1	MELO.jh101629.1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding