MELO.jh101617.1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh101617.1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	chr05: 10534475 .. 10536262 (-)
RNA-Seq Expression	MELO.jh101617.1
Synteny	MELO.jh101617.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAATAATCAAGACTGTGAGATTATTGGTATAGGCTCAGTGTTGTTGAAGTTATCTAACAACAGGGAGGTTCTCCTTAAAGGGGTAAGACATGTTCCAAAACTAAAGAGAAACCTTATCTCTTTAGGTATGCTTGATGACCTAGGTTGCTTCATTTATATTGAAAGAGGCTTCATGAAGGTGGAAAGACAAGGAAAAGTAATTCTTAATTCAAGAAAGGTGGAAGGCTTGTATACTGTGAAAAATGTGATCAAACCCAAGTATGCTTTAATTTCAGAAACTGAGAAAGGAAATAAATTAGAACTATGGCATCGAAGACTTTCACATATCAGTGAAAAAGGGCTTACTGAACTACAAAAACAAGGGCTGATTCAAGCTAGAGGAGTAAAAAACCTTGGCTTTTGTGAAGACTACAGCTTTAGCAAGTCTAAGAGGCTGAAATTCTCTAAAGGAGAACATCACTCAAAAGTCACCTTAGACTATGTACATGGTGATCTTTGTGGACCAGCTAGAACTAATTCTTGGGGAGGATCAAGGTACTTTTTATCTCTTATAGATGATTTTTCAAGAAAAGTATGGACTTATCCTCTAAAATCTAAAGATCAAGCTTTTGAATGCTTTAAAAATTGGAAAGTTAAAGTAGAAAATCAAATTGAAAGGAAAATTAAATACTTAAGAACTGATAATGGCCTAGAATTTCTTAGTAATAATTTTAACTTTCTTTGTAATGAGTTTGATATATCAAGGCACAGAACAGTTGCTTACACCCCTCAACAGAATGGAGTTGCCGAGAGGATGAATAGAACATTGATGGAAAGAGTGAGATGTATGATTTCAGAGGCAAGAATCTCATAAAATTTTTGGGCTGAAGCTTTAGCTACTGCCACCTAAACAGTGAGTAGAAGCCCATGTGTTTCTATAGACATGAAGACTCCTGAAAAAAGATGGACTGAAGCTACCCTTAAGCTCTCTAATCTAAAACCTTTTGGGTGTACAACATATGTCTACATCAAACAAAGCAAGATTGAACCAAGAGCTCTTAAATATATGTTTATTGGCTACCCTGATGGTGTCAAAAGCTACAAGCTCTAGGATTTCTCTAAAGAAACAGGCCTAATAAGCAGAGATGTTATTTTCAAGGAGAATGAAATCTATATGGATTCTATCAAAGTAATACCTTCTGCTGAACATAATTTGAATGAACCTTCTACCAGCCACCAAGTAGAGATTCATTCAAATTTGAAAGACTCAGACCCTAGCAGCAGTGATCAACTTCCAACAAAAGCTTTTCCTAGCTTTCATCCTCAAGAAGAAGAGGAAGAAGAAAATGCAGAAGACTTGACAAATTATAGTTTAACAAGAGATAGAGGGAGAAAAACCATTAGGCCTCCTTCTAGATTTGCAAGAGCAGATTGCATAGCTAACTCCTCTATAGAGACTATAGAAGATGAGCCTTACAGTTATAAAGATGCTCTATGCAGTAGACACAACAATCAGTGGAAAGAAGCCATGAATGATGAACTTAATTCACTCTACAAGAATGATACTTGGGAACTAGTAGAAACGCCACATGGAAAAAGTATCATTCCTTGTAAATGGGTCTTCAAAAAGAAGATGATTGGTTATTTGAATGACAAAGTAAAATTTAAGGCAAGACTAGTAGCTAAAGGCTTCGAGCAAAAGGAGGGTGTAGACTATAATGAGATTTTTTCCCCTGTTGTGAAGCACACTTCTATAAGAATCCTACTGACTATTGTAGCATGTGAAAATCTTGAGCTGGAATAG

mRNA sequence

ATGGGAAATAATCAAGACTGTGAGATTATTGGTATAGGCTCAGTGTTGTTGAAGTTATCTAACAACAGGGAGGTTCTCCTTAAAGGGGTAAGACATGTTCCAAAACTAAAGAGAAACCTTATCTCTTTAGGTATGCTTGATGACCTAGGTTGCTTCATTTATATTGAAAGAGGCTTCATGAAGGTGGAAAGACAAGGAAAAGTAATTCTTAATTCAAGAAAGGTGGAAGGCTTGTATACTGTGAAAAATGTGATCAAACCCAAGTATGCTTTAATTTCAGAAACTGAGAAAGGAAATAAATTAGAACTATGGCATCGAAGACTTTCACATATCAGTGAAAAAGGGCTTACTGAACTACAAAAACAAGGGCTGATTCAAGCTAGAGGAGTAAAAAACCTTGGCTTTTGTGAAGACTACAGCTTTAGCAAGTCTAAGAGGCTGAAATTCTCTAAAGGAGAACATCACTCAAAAGTCACCTTAGACTATGTACATGGTGATCTTTGTGGACCAGCTAGAACTAATTCTTGGGGAGGATCAAGCCACCAAGTAGAGATTCATTCAAATTTGAAAGACTCAGACCCTAGCAGCAGTGATCAACTTCCAACAAAAGCTTTTCCTAGCTTTCATCCTCAAGAAGAAGAGGAAGAAGAAAATGCAGAAGACTTGACAAATTATAGTTTAACAAGAGATAGAGGGAGAAAAACCATTAGGCCTCCTTCTAGATTTGCAAGAGCAGATTGCATAGCTAACTCCTCTATAGAGACTATAGAAGATGAGCCTTACAGTTATAAAGATGCTCTATGCAGTAGACACAACAATCAGTGGAAAGAAGCCATGAATGATGAACTTAATTCACTCTACAAGAATGATACTTGGGAACTAGTAGAAACGCCACATGGAAAAAGTATCATTCCTTGTAAATGGGTCTTCAAAAAGAAGATGATTGGTTATTTGAATGACAAAGTAAAATTTAAGGCAAGACTAGTAGCTAAAGGCTTCGAGCAAAAGGAGGGTGTAGACTATAATGAGATTTTTTCCCCTGTTGTGAAGCACACTTCTATAAGAATCCTACTGACTATTGTAGCATGTGAAAATCTTGAGCTGGAATAG

Coding sequence (CDS)

ATGGGAAATAATCAAGACTGTGAGATTATTGGTATAGGCTCAGTGTTGTTGAAGTTATCTAACAACAGGGAGGTTCTCCTTAAAGGGGTAAGACATGTTCCAAAACTAAAGAGAAACCTTATCTCTTTAGGTATGCTTGATGACCTAGGTTGCTTCATTTATATTGAAAGAGGCTTCATGAAGGTGGAAAGACAAGGAAAAGTAATTCTTAATTCAAGAAAGGTGGAAGGCTTGTATACTGTGAAAAATGTGATCAAACCCAAGTATGCTTTAATTTCAGAAACTGAGAAAGGAAATAAATTAGAACTATGGCATCGAAGACTTTCACATATCAGTGAAAAAGGGCTTACTGAACTACAAAAACAAGGGCTGATTCAAGCTAGAGGAGTAAAAAACCTTGGCTTTTGTGAAGACTACAGCTTTAGCAAGTCTAAGAGGCTGAAATTCTCTAAAGGAGAACATCACTCAAAAGTCACCTTAGACTATGTACATGGTGATCTTTGTGGACCAGCTAGAACTAATTCTTGGGGAGGATCAAGCCACCAAGTAGAGATTCATTCAAATTTGAAAGACTCAGACCCTAGCAGCAGTGATCAACTTCCAACAAAAGCTTTTCCTAGCTTTCATCCTCAAGAAGAAGAGGAAGAAGAAAATGCAGAAGACTTGACAAATTATAGTTTAACAAGAGATAGAGGGAGAAAAACCATTAGGCCTCCTTCTAGATTTGCAAGAGCAGATTGCATAGCTAACTCCTCTATAGAGACTATAGAAGATGAGCCTTACAGTTATAAAGATGCTCTATGCAGTAGACACAACAATCAGTGGAAAGAAGCCATGAATGATGAACTTAATTCACTCTACAAGAATGATACTTGGGAACTAGTAGAAACGCCACATGGAAAAAGTATCATTCCTTGTAAATGGGTCTTCAAAAAGAAGATGATTGGTTATTTGAATGACAAAGTAAAATTTAAGGCAAGACTAGTAGCTAAAGGCTTCGAGCAAAAGGAGGGTGTAGACTATAATGAGATTTTTTCCCCTGTTGTGAAGCACACTTCTATAAGAATCCTACTGACTATTGTAGCATGTGAAAATCTTGAGCTGGAATAG

Protein sequence

MGNNQDCEIIGIGSVLLKLSNNREVLLKGVRHVPKLKRNLISLGMLDDLGCFIYIERGFMKVERQGKVILNSRKVEGLYTVKNVIKPKYALISETEKGNKLELWHRRLSHISEKGLTELQKQGLIQARGVKNLGFCEDYSFSKSKRLKFSKGEHHSKVTLDYVHGDLCGPARTNSWGGSSHQVEIHSNLKDSDPSSSDQLPTKAFPSFHPQEEEEEENAEDLTNYSLTRDRGRKTIRPPSRFARADCIANSSIETIEDEPYSYKDALCSRHNNQWKEAMNDELNSLYKNDTWELVETPHGKSIIPCKWVFKKKMIGYLNDKVKFKARLVAKGFEQKEGVDYNEIFSPVVKHTSIRILLTIVACENLELE

Homology

[Close]

BLAST of MELO.jh101617.1 vs. NCBI nr
Match: KAA0039651.1 (retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa] >TYJ95535.1 retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa])

HSP 1 Score: 646 bits (1667), Expect = 3.28e-226
Identity = 335/404 (82.92%), Postives = 336/404 (83.17%), Query Frame = 0


Query: 1   MGNNQDCEIIGIGSVLLKLSNNREVLLKGVRHVPKLKRNLISLGMLDDLGCFIYIERGFM 60
           MGNNQDCEIIGIGSVLLKLSNNREVLLKGVRHVPKLKRNLISLGMLDDLGCFIYIERGFM
Sbjct: 64  MGNNQDCEIIGIGSVLLKLSNNREVLLKGVRHVPKLKRNLISLGMLDDLGCFIYIERGFM 123

Query: 61  KVERQGKVILNSRKVEGLYTVKNVIKPKYALISETEKGNKLELWHRRLSHISEKGLTELQ 120
           KVERQGKVILNSRKVEGLYTVKNVIKPKYALISETEKGNKLELWHRRLSHISEKGLTELQ
Sbjct: 124 KVERQGKVILNSRKVEGLYTVKNVIKPKYALISETEKGNKLELWHRRLSHISEKGLTELQ 183

Query: 121 KQGLIQARGVKNLGFCEDYSFSKSKRLKFSKGEHHSKVTLDYVHGDLCGPARTNSWGGS- 180
           KQGLIQARGVKNLGFCED  FSKSKRLKFSKGEHHSKVTLDYVHGDLCGPARTNSWGGS 
Sbjct: 184 KQGLIQARGVKNLGFCEDCIFSKSKRLKFSKGEHHSKVTLDYVHGDLCGPARTNSWGGSR 243

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 244 HRTVAYTPQQNGVAEMMNRTLMERDFSKERGLISRDVIFKENEIYMDSIKVIPSAEHNLN 303

Query: 241 ----SHQVEIHSNLKDSDPSSSDQLPTKAFPSFHPQEEEEEENAEDLTNYSLTRDRGRKT 300
               SHQVEIHSNLKDS+PSSSDQLPTKAFPSFHPQEEEEEENAEDLTNYSLTRDRGRKT
Sbjct: 304 EPSTSHQVEIHSNLKDSNPSSSDQLPTKAFPSFHPQEEEEEENAEDLTNYSLTRDRGRKT 363

Query: 301 IRPPSRFARADCIANSSIETIEDEPYSYKDALCSRHNNQWKEAMNDELNSLYKNDTWELV 339
           IRPPSRFARADCIANSSIETIEDEPYSYKDALCSRHNNQWKEAMNDELNSLYKNDTWELV
Sbjct: 364 IRPPSRFARADCIANSSIETIEDEPYSYKDALCSRHNNQWKEAMNDELNSLYKNDTWELV 423

[Close]

BLAST of MELO.jh101617.1 vs. NCBI nr
Match: KAA0033501.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK26828.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 524 bits (1350), Expect = 2.16e-179
Identity = 303/525 (57.71%), Postives = 317/525 (60.38%), Query Frame = 0


Query: 1   MGNNQDCEIIGIGSVLLKLSNNREVLLKGVRHVPKLKRNLISLGMLDDLGCFIYIERGFM 60
           MGNNQD EIIG+GSVLLKLSNN+EVL KGVRHVPKLKRNLISLGMLDDL CFIYIERGFM
Sbjct: 1   MGNNQDYEIIGVGSVLLKLSNNKEVLFKGVRHVPKLKRNLISLGMLDDLRCFIYIERGFM 60

Query: 61  KVERQGKVILNSRKVEGLYTVKNVIKPKYALISETEKGNKLELWHRRLSHISEKGLTELQ 120
           KVERQG+VILNSRKVE LYTVKNVIKPKY+LISETEKGN+LELWH+RLSHISEKGLTELQ
Sbjct: 61  KVERQGRVILNSRKVEDLYTVKNVIKPKYSLISETEKGNELELWHQRLSHISEKGLTELQ 120

Query: 121 KQGLIQARGVKNLGFCEDYSFSKSKRLKFSKGEHHSKVTLDYVHGDLCGPARTNSWGGS- 180
           KQG IQARGVK LGFCE   F KSKRLKFSKG+H SK TLDYVHGDL GPART+SWGGS 
Sbjct: 121 KQGPIQARGVKRLGFCEHCIFDKSKRLKFSKGKHQSKATLDYVHGDLWGPARTHSWGGSR 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 HRTVAYTPQQNGVAERMNRTLRERVRCMISKAKILENFWVEALATATYTVNRSPCVFIDM 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 KTPEERWTEDTPKLSNLKPFGCTTYVYIKQSKIEPKALKCMFIGHPDGVKGYKLWDFSKE 300

Query: 301 -----------------------------------SHQVEIHSNLKDSDPSSSDQLPTKA 360
                                              SHQVEIHSNLKD +PSSSDQLPT+A
Sbjct: 301 RSLISRDVVFKENEIYMESIKVIPSTEQNLNEASTSHQVEIHSNLKDLNPSSSDQLPTEA 360

Query: 361 FPSFHPQEEEEEENAEDLTNYSLTRDRGRKTIRPPSRFARADCIANSSIETIEDEPYSYK 369
            PSFHPQEEEEEENAEDLTNYSLTRDRGR+TIRPPSRFARADCIANSS ETI+DEPYSY+
Sbjct: 361 LPSFHPQEEEEEENAEDLTNYSLTRDRGRRTIRPPSRFARADCIANSSTETIKDEPYSYE 420

[Close]

BLAST of MELO.jh101617.1 vs. NCBI nr
Match: KAA0051442.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK22211.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 459 bits (1182), Expect = 1.00e-150
Identity = 277/505 (54.85%), Postives = 292/505 (57.82%), Query Frame = 0


Query: 1   MGNNQDCEIIGIGSVLLKLSNNREVLLKGVRHVPKLKRNLISLGMLDDLGCFIYIERGFM 60
           MGNNQDCEIIG+GSVLLKLS+NREVLLKGV                              
Sbjct: 299 MGNNQDCEIIGVGSVLLKLSSNREVLLKGV------------------------------ 358

Query: 61  KVERQGKVILNSRKVEGLYTVKNVIKPKYALISETEKGNKLELWHRRLSHISEKGLTELQ 120
             ERQG+VILNSRKVEGLYTVKNVIKPKYALISETEKGN+LELWHRRLSHISEKGLTELQ
Sbjct: 359 --ERQGRVILNSRKVEGLYTVKNVIKPKYALISETEKGNELELWHRRLSHISEKGLTELQ 418

Query: 121 KQGLIQARGVKNLGFCEDYSFSKSKRLKFSKGEHHSKVTLDYVHGDLCGPARTNSWGGS- 180
           KQGLIQ RGVK LGFCE   F KSKR+KFSKGEHHSK TLDYVHGDL GPART+SWGGS 
Sbjct: 419 KQGLIQTRGVKRLGFCEHCIFGKSKRMKFSKGEHHSKATLDYVHGDLWGPARTHSWGGSR 478

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 479 TSMERVRCMISEAKISKTFWAEALTTATYTVNRSPCVSIDMKTPEERWIGATPKLSNLKP 538

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 539 FGCTTYVYIKQSKIEPRALKCMFIGYPDGVKDYKLWDFFKERSLISRDVVFKENEIYMES 598

Query: 301 ---------------SHQVEIHSNLKDSDPSSSDQLPTKAFPSFHPQEEEEEENAEDLTN 360
                          SHQVEIHSNLK+ +PSSSDQLPT+A PSF+ QEEEEEENAEDLTN
Sbjct: 599 IKVIPAEKNLNEPSTSHQVEIHSNLKNLNPSSSDQLPTEALPSFYSQEEEEEENAEDLTN 658

Query: 361 YSLTRDRGRKTIRPPSRFARADCIANSSIETIEDEPYSYKDALCSRHNNQWKEAMNDELN 369
           YSLTRDRGR+TI+PPSRFARADCI NSSIETIED+P SY+DAL                 
Sbjct: 659 YSLTRDRGRRTIKPPSRFARADCIVNSSIETIEDKPDSYEDAL----------------- 718

[Close]

BLAST of MELO.jh101617.1 vs. NCBI nr
Match: KAA0054988.1 (hypothetical protein E6C27_scaffold43052G001360 [Cucumis melo var. makuwa])

HSP 1 Score: 461 bits (1185), Expect = 1.20e-150
Identity = 255/374 (68.18%), Postives = 274/374 (73.26%), Query Frame = 0


Query: 31  RHVPKLKRNLISLGMLDDLGCFIYIERGFMKVERQGKVILNSRKVEGLYTVKNVIKPKYA 90
           RHVPKLKRNLISLGMLDDLGCFIYIERGFMKVERQG+VILNSRKVE LYTVKNVIKPKYA
Sbjct: 294 RHVPKLKRNLISLGMLDDLGCFIYIERGFMKVERQGRVILNSRKVEDLYTVKNVIKPKYA 353

Query: 91  LISETEKGNKLELWHRRLSHISEKGLTELQKQGLIQARGVKNLGFCEDYSFSKSKRLKFS 150
           LISETEK N+LELWH+RLSHISEKGLTELQK GLIQ RGVK LGFCE   F KSKRLKFS
Sbjct: 354 LISETEKENELELWHQRLSHISEKGLTELQKHGLIQTRGVKRLGFCEHCIFGKSKRLKFS 413

Query: 151 KGEHHSKVTLDYVHGDLCGPARTNSWGGSSHQVEIH-----------------------S 210
           KGEHH+K TLDYVHGDL GPART+SWGGS H+   +                       S
Sbjct: 414 KGEHHTKATLDYVHGDLWGPARTHSWGGSRHRTVAYTPQQNGVAERMNRTLMERVRCMIS 473

Query: 211 NLKDSDPSSSDQLPTKAFP-------SFHPQEEEEE-----ENAEDLTNYSLTRDRGRKT 270
             K S+   ++ L T  +        S   +  EE          +L  +  T     K 
Sbjct: 474 EAKISENFWAEALATATYTVTRSLCVSIDMKTPEERWTGATPKLSNLKPFGCTTYVYIKQ 533

Query: 271 IRPPSRFARADCIANSSIETIEDEPYSYKDALCSRHNNQWKEAMNDELNSLYKNDTWELV 330
            +   R A   C ANSS ETIEDEP SY+DAL S+H NQWKEAMNDELNSLYKNDTWELV
Sbjct: 534 SKIEPR-ALKYCRANSSTETIEDEPDSYEDALYSKHRNQWKEAMNDELNSLYKNDTWELV 593

Query: 331 ETPHGKSIIPCKWVFKKKMIGYLNDKVKFKARLVAKGFEQKEGVDYNEIFSPVVKHTSIR 369
           E PH KSIIPCKWVFKKKMI  LNDKVK KARLVAKGF+QKEGVDYNEIFSPVVKHT IR
Sbjct: 594 EKPHKKSIIPCKWVFKKKMIDDLNDKVKIKARLVAKGFKQKEGVDYNEIFSPVVKHTCIR 653

[Close]

BLAST of MELO.jh101617.1 vs. NCBI nr
Match: KAA0062924.1 (retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa] >TYK16419.1 retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa])

HSP 1 Score: 314 bits (805), Expect = 1.73e-102
Identity = 155/183 (84.70%), Postives = 165/183 (90.16%), Query Frame = 0


Query: 1   MGNNQDCEIIGIGSVLLKLSNNREVLLKGVRHVPKLKRNLISLGMLDDLGCFIYIERGFM 60
           MGNN+ CEIIG+ SVLLKLSNNREVLLKGVRHVPKLKR+LISLGM+DDLGCFIYIE+G M
Sbjct: 1   MGNNRYCEIIGVSSVLLKLSNNREVLLKGVRHVPKLKRHLISLGMIDDLGCFIYIEKGSM 60

Query: 61  KVERQGKVILNSRKVEGLYTVKNVIKPKYALISETEKGNKLELWHRRLSHISEKGLTELQ 120
           KVERQG+VILNSRKVEGLY VKNVIKPKYALISETEKGN+LELWHRRLSHISEKGLTELQ
Sbjct: 61  KVERQGRVILNSRKVEGLYIVKNVIKPKYALISETEKGNELELWHRRLSHISEKGLTELQ 120

Query: 121 KQGLIQARGVKNLGFCEDYSFSKSKRLKFSKGEHHSKVTLDYVHGDLCGPARTNSWGGSS 180
           KQ LIQAR VK  GFCE   F KSKRLKFSKG+HHSK TL YVHGDL GPART+SW GS 
Sbjct: 121 KQRLIQAREVKRFGFCEHCIFGKSKRLKFSKGQHHSKATLGYVHGDLWGPARTHSWRGSR 180

Query: 181 HQV 183
           H+ 
Sbjct: 181 HRT 183

[Close]

BLAST of MELO.jh101617.1 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 2.8e-24
Identity = 60/111 (54.05%), Postives = 78/111 (70.27%), Query Frame = 0


Query: 259 EPYSYKDALCSRHNNQWKEAMNDELNSLYKNDTWELVETPHGKSIIPCKWVFKKKMIGYL 318
           EP S K+ L     NQ  +AM +E+ SL KN T++LVE P GK  + CKWVFK K  G  
Sbjct: 810 EPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDC 869

Query: 319 NDKVKFKARLVAKGFEQKEGVDYNEIFSPVVKHTSIRILLTIVACENLELE 370
              V++KARLV KGFEQK+G+D++EIFSPVVK TSIR +L++ A  +LE+E
Sbjct: 870 K-LVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVE 919

HSP 2 Score: 89.4 bits (220), Expect = 9.5e-17
Identity = 59/183 (32.24%), Postives = 85/183 (46.45%), Query Frame = 0


Query: 1   MGNNQDCEIIGIGSVLLKLSNNREVLLKGVRHVPKLKRNLISLGMLDDLGCFIYIERGFM 60
           MGN    +I GIG + +K +    ++LK VRHVP L+ NLIS   LD  G   Y      
Sbjct: 324 MGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHVPDLRMNLISGIALDRDGYESYFANQKW 383

Query: 61  KVERQGKVILNSRKVEGLYTVKNVIKPKYALISETEKGNKLELWHRRLSHISEKGLTELQ 120
           ++ +   VI        LY     I      ++  +    ++LWH+R+ H+SEKGL  L 
Sbjct: 384 RLTKGSLVIAKGVARGTLYRTNAEI--CQGELNAAQDEISVDLWHKRMGHMSEKGLQILA 443

Query: 121 KQGLIQARGVKNLGFCEDYSFSKSKRLKFSKGEHHSKVTLDYVHGDLCGPARTNSWGGSS 180
           K+ LI       +  C+   F K  R+ F          LD V+ D+CGP    S GG+ 
Sbjct: 444 KKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSSERKLNILDLVYSDVCGPMEIESMGGNK 503

Query: 181 HQV 184
           + V
Sbjct: 504 YFV 504

[Close]

BLAST of MELO.jh101617.1 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 2.5e-17
Identity = 64/186 (34.41%), Postives = 101/186 (54.30%), Query Frame = 0


Query: 179  SSHQVEIHSNLKDSDPSSSDQLPTKAFPSFHPQEEEEEENAEDLTNYSLTRDRGRKTIRP 238
            S H     +++ + +  SS    T   P   P     + NA+   N      R +  IR 
Sbjct: 863  SPHIPTPSTSISEPNSPSSSSTSTPPLPPVLPAPPIIQVNAQAPVNTHSMATRAKDGIRK 922

Query: 239  PS-RFARADCIANSSIETIEDEPYSYKDALCSRHNNQWKEAMNDELNSLYKNDTWELV-E 298
            P+ +++ A  +A +S      EP   + A+ +  +++W++AM  E+N+   N TW+LV  
Sbjct: 923  PNQKYSYATSLAANS------EP---RTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPP 982

Query: 299  TPHGKSIIPCKWVFKKKM--IGYLNDKVKFKARLVAKGFEQKEGVDYNEIFSPVVKHTSI 358
             P   +I+ C+W+F KK    G LN   ++KARLVAKG+ Q+ G+DY E FSPV+K TSI
Sbjct: 983  PPPSVTIVGCRWIFTKKFNSDGSLN---RYKARLVAKGYNQRPGLDYAETFSPVIKSTSI 1036

Query: 359  RILLTI 361
            RI+L +
Sbjct: 1043 RIVLGV 1036

[Close]

BLAST of MELO.jh101617.1 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 88.6 bits (218), Expect = 1.6e-16
Identity = 60/196 (30.61%), Postives = 96/196 (48.98%), Query Frame = 0


Query: 189 LKDSDPSSSDQLPTKAFPSFHPQEEEEEENAEDLTNYSL---TRDRG---------RKTI 248
           L +S     D    ++  S +P E  E E AE L    +   T++ G         R   
Sbjct: 804 LNESKKRKRDDHLNESKGSGNPNESRESETAEHLKEIGIDNPTKNDGIEIINRRSERLKT 863

Query: 249 RPPSRFARADCIANSSI----ETIEDEPYSYKDALCSRHNNQWKEAMNDELNSLYKNDTW 308
           +P   +   D   N  +        D P S+ +       + W+EA+N ELN+   N+TW
Sbjct: 864 KPQISYNEEDNSLNKVVLNAHTIFNDVPNSFDEIQYRDDKSSWEEAINTELNAHKINNTW 923

Query: 309 ELVETPHGKSIIPCKWVFKKKMIGYLNDKVKFKARLVAKGFEQKEGVDYNEIFSPVVKHT 368
            + + P  K+I+  +WVF  K    L + +++KARLVA+GF QK  +DY E F+PV + +
Sbjct: 924 TITKRPENKNIVDSRWVFSVK-YNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARIS 983

[Close]

BLAST of MELO.jh101617.1 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.8e-16
Identity = 62/173 (35.84%), Postives = 91/173 (52.60%), Query Frame = 0


Query: 195  SSSDQLPTKAFPSFHP----QEEEEEENAEDLTNYSLTRDRGRKTIRPPSRFARADCIAN 254
            SSS   PT      HP     +     N   L  +S+        I+P  +++ A  +A 
Sbjct: 893  SSSSTSPTPPSILIHPPPPLAQIVNNNNQAPLNTHSMGTRAKAGIIKPNPKYSLAVSLA- 952

Query: 255  SSIETIEDEPYSYKDALCSRHNNQWKEAMNDELNSLYKNDTWELVETPHGK-SIIPCKWV 314
                  E EP   + A+ +  + +W+ AM  E+N+   N TW+LV  P    +I+ C+W+
Sbjct: 953  -----AESEP---RTAIQALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWI 1012

Query: 315  FKKK--MIGYLNDKVKFKARLVAKGFEQKEGVDYNEIFSPVVKHTSIRILLTI 361
            F KK    G LN   ++KARLVAKG+ Q+ G+DY E FSPV+K TSIRI+L +
Sbjct: 1013 FTKKYNSDGSLN---RYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGV 1053

[Close]

BLAST of MELO.jh101617.1 vs. ExPASy Swiss-Prot
Match: P93293 (Uncharacterized mitochondrial protein AtMg00300 OS=Arabidopsis thaliana OX=3702 GN=AtMg00300 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 8.1e-16
Identity = 42/112 (37.50%), Postives = 70/112 (62.50%), Query Frame = 0


Query: 58  GFMKVERQGKVILNSRKVEGLYTVKNVIKPKYALISETEKGNKLELWHRRLSHISEKGLT 117
           G +KV +  + IL   + + LY ++  ++   + ++ET K ++  LWH RL+H+S++G+ 
Sbjct: 27  GVLKVLKGCRTILKGNRHDSLYILQGSVETGESNLAETAK-DETRLWHSRLAHMSQRGME 86

Query: 118 ELQKQGLIQARGVKNLGFCEDYSFSKSKRLKFSKGEHHSKVTLDYVHGDLCG 170
            L K+G + +  V +L FCED  + K+ R+ FS G+H +K  LDYVH DL G
Sbjct: 87  LLVKKGFLDSSKVSSLKFCEDCIYGKTHRVNFSTGQHTTKNPLDYVHSDLWG 137

[Close]

BLAST of MELO.jh101617.1 vs. ExPASy TrEMBL
Match: A0A5D3BAM8 (Retrotransposon protein, putative, Ty1-copia subclass OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold767G00260 PE=4 SV=1)

HSP 1 Score: 646 bits (1667), Expect = 1.59e-226
Identity = 335/404 (82.92%), Postives = 336/404 (83.17%), Query Frame = 0


Query: 1   MGNNQDCEIIGIGSVLLKLSNNREVLLKGVRHVPKLKRNLISLGMLDDLGCFIYIERGFM 60
           MGNNQDCEIIGIGSVLLKLSNNREVLLKGVRHVPKLKRNLISLGMLDDLGCFIYIERGFM
Sbjct: 64  MGNNQDCEIIGIGSVLLKLSNNREVLLKGVRHVPKLKRNLISLGMLDDLGCFIYIERGFM 123

Query: 61  KVERQGKVILNSRKVEGLYTVKNVIKPKYALISETEKGNKLELWHRRLSHISEKGLTELQ 120
           KVERQGKVILNSRKVEGLYTVKNVIKPKYALISETEKGNKLELWHRRLSHISEKGLTELQ
Sbjct: 124 KVERQGKVILNSRKVEGLYTVKNVIKPKYALISETEKGNKLELWHRRLSHISEKGLTELQ 183

Query: 121 KQGLIQARGVKNLGFCEDYSFSKSKRLKFSKGEHHSKVTLDYVHGDLCGPARTNSWGGS- 180
           KQGLIQARGVKNLGFCED  FSKSKRLKFSKGEHHSKVTLDYVHGDLCGPARTNSWGGS 
Sbjct: 184 KQGLIQARGVKNLGFCEDCIFSKSKRLKFSKGEHHSKVTLDYVHGDLCGPARTNSWGGSR 243

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 244 HRTVAYTPQQNGVAEMMNRTLMERDFSKERGLISRDVIFKENEIYMDSIKVIPSAEHNLN 303

Query: 241 ----SHQVEIHSNLKDSDPSSSDQLPTKAFPSFHPQEEEEEENAEDLTNYSLTRDRGRKT 300
               SHQVEIHSNLKDS+PSSSDQLPTKAFPSFHPQEEEEEENAEDLTNYSLTRDRGRKT
Sbjct: 304 EPSTSHQVEIHSNLKDSNPSSSDQLPTKAFPSFHPQEEEEEENAEDLTNYSLTRDRGRKT 363

Query: 301 IRPPSRFARADCIANSSIETIEDEPYSYKDALCSRHNNQWKEAMNDELNSLYKNDTWELV 339
           IRPPSRFARADCIANSSIETIEDEPYSYKDALCSRHNNQWKEAMNDELNSLYKNDTWELV
Sbjct: 364 IRPPSRFARADCIANSSIETIEDEPYSYKDALCSRHNNQWKEAMNDELNSLYKNDTWELV 423

[Close]

BLAST of MELO.jh101617.1 vs. ExPASy TrEMBL
Match: A0A5A7SVP7 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold260G00170 PE=4 SV=1)

HSP 1 Score: 524 bits (1350), Expect = 1.04e-179
Identity = 303/525 (57.71%), Postives = 317/525 (60.38%), Query Frame = 0


Query: 1   MGNNQDCEIIGIGSVLLKLSNNREVLLKGVRHVPKLKRNLISLGMLDDLGCFIYIERGFM 60
           MGNNQD EIIG+GSVLLKLSNN+EVL KGVRHVPKLKRNLISLGMLDDL CFIYIERGFM
Sbjct: 1   MGNNQDYEIIGVGSVLLKLSNNKEVLFKGVRHVPKLKRNLISLGMLDDLRCFIYIERGFM 60

Query: 61  KVERQGKVILNSRKVEGLYTVKNVIKPKYALISETEKGNKLELWHRRLSHISEKGLTELQ 120
           KVERQG+VILNSRKVE LYTVKNVIKPKY+LISETEKGN+LELWH+RLSHISEKGLTELQ
Sbjct: 61  KVERQGRVILNSRKVEDLYTVKNVIKPKYSLISETEKGNELELWHQRLSHISEKGLTELQ 120

Query: 121 KQGLIQARGVKNLGFCEDYSFSKSKRLKFSKGEHHSKVTLDYVHGDLCGPARTNSWGGS- 180
           KQG IQARGVK LGFCE   F KSKRLKFSKG+H SK TLDYVHGDL GPART+SWGGS 
Sbjct: 121 KQGPIQARGVKRLGFCEHCIFDKSKRLKFSKGKHQSKATLDYVHGDLWGPARTHSWGGSR 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 HRTVAYTPQQNGVAERMNRTLRERVRCMISKAKILENFWVEALATATYTVNRSPCVFIDM 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 KTPEERWTEDTPKLSNLKPFGCTTYVYIKQSKIEPKALKCMFIGHPDGVKGYKLWDFSKE 300

Query: 301 -----------------------------------SHQVEIHSNLKDSDPSSSDQLPTKA 360
                                              SHQVEIHSNLKD +PSSSDQLPT+A
Sbjct: 301 RSLISRDVVFKENEIYMESIKVIPSTEQNLNEASTSHQVEIHSNLKDLNPSSSDQLPTEA 360

Query: 361 FPSFHPQEEEEEENAEDLTNYSLTRDRGRKTIRPPSRFARADCIANSSIETIEDEPYSYK 369
            PSFHPQEEEEEENAEDLTNYSLTRDRGR+TIRPPSRFARADCIANSS ETI+DEPYSY+
Sbjct: 361 LPSFHPQEEEEEENAEDLTNYSLTRDRGRRTIRPPSRFARADCIANSSTETIKDEPYSYE 420

[Close]

BLAST of MELO.jh101617.1 vs. ExPASy TrEMBL
Match: A0A5A7U6R2 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold333G00930 PE=4 SV=1)

HSP 1 Score: 459 bits (1182), Expect = 4.86e-151
Identity = 277/505 (54.85%), Postives = 292/505 (57.82%), Query Frame = 0


Query: 1   MGNNQDCEIIGIGSVLLKLSNNREVLLKGVRHVPKLKRNLISLGMLDDLGCFIYIERGFM 60
           MGNNQDCEIIG+GSVLLKLS+NREVLLKGV                              
Sbjct: 299 MGNNQDCEIIGVGSVLLKLSSNREVLLKGV------------------------------ 358

Query: 61  KVERQGKVILNSRKVEGLYTVKNVIKPKYALISETEKGNKLELWHRRLSHISEKGLTELQ 120
             ERQG+VILNSRKVEGLYTVKNVIKPKYALISETEKGN+LELWHRRLSHISEKGLTELQ
Sbjct: 359 --ERQGRVILNSRKVEGLYTVKNVIKPKYALISETEKGNELELWHRRLSHISEKGLTELQ 418

Query: 121 KQGLIQARGVKNLGFCEDYSFSKSKRLKFSKGEHHSKVTLDYVHGDLCGPARTNSWGGS- 180
           KQGLIQ RGVK LGFCE   F KSKR+KFSKGEHHSK TLDYVHGDL GPART+SWGGS 
Sbjct: 419 KQGLIQTRGVKRLGFCEHCIFGKSKRMKFSKGEHHSKATLDYVHGDLWGPARTHSWGGSR 478

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 479 TSMERVRCMISEAKISKTFWAEALTTATYTVNRSPCVSIDMKTPEERWIGATPKLSNLKP 538

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 539 FGCTTYVYIKQSKIEPRALKCMFIGYPDGVKDYKLWDFFKERSLISRDVVFKENEIYMES 598

Query: 301 ---------------SHQVEIHSNLKDSDPSSSDQLPTKAFPSFHPQEEEEEENAEDLTN 360
                          SHQVEIHSNLK+ +PSSSDQLPT+A PSF+ QEEEEEENAEDLTN
Sbjct: 599 IKVIPAEKNLNEPSTSHQVEIHSNLKNLNPSSSDQLPTEALPSFYSQEEEEEENAEDLTN 658

Query: 361 YSLTRDRGRKTIRPPSRFARADCIANSSIETIEDEPYSYKDALCSRHNNQWKEAMNDELN 369
           YSLTRDRGR+TI+PPSRFARADCI NSSIETIED+P SY+DAL                 
Sbjct: 659 YSLTRDRGRRTIKPPSRFARADCIVNSSIETIEDKPDSYEDAL----------------- 718

[Close]

BLAST of MELO.jh101617.1 vs. ExPASy TrEMBL
Match: A0A5A7UJ23 (Integrase catalytic domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43052G001360 PE=4 SV=1)

HSP 1 Score: 461 bits (1185), Expect = 5.83e-151
Identity = 255/374 (68.18%), Postives = 274/374 (73.26%), Query Frame = 0


Query: 31  RHVPKLKRNLISLGMLDDLGCFIYIERGFMKVERQGKVILNSRKVEGLYTVKNVIKPKYA 90
           RHVPKLKRNLISLGMLDDLGCFIYIERGFMKVERQG+VILNSRKVE LYTVKNVIKPKYA
Sbjct: 294 RHVPKLKRNLISLGMLDDLGCFIYIERGFMKVERQGRVILNSRKVEDLYTVKNVIKPKYA 353

Query: 91  LISETEKGNKLELWHRRLSHISEKGLTELQKQGLIQARGVKNLGFCEDYSFSKSKRLKFS 150
           LISETEK N+LELWH+RLSHISEKGLTELQK GLIQ RGVK LGFCE   F KSKRLKFS
Sbjct: 354 LISETEKENELELWHQRLSHISEKGLTELQKHGLIQTRGVKRLGFCEHCIFGKSKRLKFS 413

Query: 151 KGEHHSKVTLDYVHGDLCGPARTNSWGGSSHQVEIH-----------------------S 210
           KGEHH+K TLDYVHGDL GPART+SWGGS H+   +                       S
Sbjct: 414 KGEHHTKATLDYVHGDLWGPARTHSWGGSRHRTVAYTPQQNGVAERMNRTLMERVRCMIS 473

Query: 211 NLKDSDPSSSDQLPTKAFP-------SFHPQEEEEE-----ENAEDLTNYSLTRDRGRKT 270
             K S+   ++ L T  +        S   +  EE          +L  +  T     K 
Sbjct: 474 EAKISENFWAEALATATYTVTRSLCVSIDMKTPEERWTGATPKLSNLKPFGCTTYVYIKQ 533

Query: 271 IRPPSRFARADCIANSSIETIEDEPYSYKDALCSRHNNQWKEAMNDELNSLYKNDTWELV 330
            +   R A   C ANSS ETIEDEP SY+DAL S+H NQWKEAMNDELNSLYKNDTWELV
Sbjct: 534 SKIEPR-ALKYCRANSSTETIEDEPDSYEDALYSKHRNQWKEAMNDELNSLYKNDTWELV 593

Query: 331 ETPHGKSIIPCKWVFKKKMIGYLNDKVKFKARLVAKGFEQKEGVDYNEIFSPVVKHTSIR 369
           E PH KSIIPCKWVFKKKMI  LNDKVK KARLVAKGF+QKEGVDYNEIFSPVVKHT IR
Sbjct: 594 EKPHKKSIIPCKWVFKKKMIDDLNDKVKIKARLVAKGFKQKEGVDYNEIFSPVVKHTCIR 653

[Close]

BLAST of MELO.jh101617.1 vs. ExPASy TrEMBL
Match: A0A5D3D1S7 (Retrotransposon protein, putative, Ty1-copia subclass OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G002150 PE=4 SV=1)

HSP 1 Score: 314 bits (805), Expect = 8.38e-103
Identity = 155/183 (84.70%), Postives = 165/183 (90.16%), Query Frame = 0


Query: 1   MGNNQDCEIIGIGSVLLKLSNNREVLLKGVRHVPKLKRNLISLGMLDDLGCFIYIERGFM 60
           MGNN+ CEIIG+ SVLLKLSNNREVLLKGVRHVPKLKR+LISLGM+DDLGCFIYIE+G M
Sbjct: 1   MGNNRYCEIIGVSSVLLKLSNNREVLLKGVRHVPKLKRHLISLGMIDDLGCFIYIEKGSM 60

Query: 61  KVERQGKVILNSRKVEGLYTVKNVIKPKYALISETEKGNKLELWHRRLSHISEKGLTELQ 120
           KVERQG+VILNSRKVEGLY VKNVIKPKYALISETEKGN+LELWHRRLSHISEKGLTELQ
Sbjct: 61  KVERQGRVILNSRKVEGLYIVKNVIKPKYALISETEKGNELELWHRRLSHISEKGLTELQ 120

Query: 121 KQGLIQARGVKNLGFCEDYSFSKSKRLKFSKGEHHSKVTLDYVHGDLCGPARTNSWGGSS 180
           KQ LIQAR VK  GFCE   F KSKRLKFSKG+HHSK TL YVHGDL GPART+SW GS 
Sbjct: 121 KQRLIQAREVKRFGFCEHCIFGKSKRLKFSKGQHHSKATLGYVHGDLWGPARTHSWRGSR 180

Query: 181 HQV 183
           H+ 
Sbjct: 181 HRT 183

[Close]

BLAST of MELO.jh101617.1 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 86.3 bits (212), Expect = 5.7e-17
Identity = 51/124 (41.13%), Postives = 72/124 (58.06%), Query Frame = 0


Query: 247 CIANSSIETIEDEPYSYKDALCSRHNNQWKEAMNDELNSLYKNDTWELVETPHGKSIIPC 306
           CIA +       EP +Y +A   +    W  AM+DE+ ++    TWE+   P  K  I C
Sbjct: 79  CIAKAK------EPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGC 138

Query: 307 KWVFKKKMIGYLNDKV--KFKARLVAKGFEQKEGVDYNEIFSPVVKHTSIRILLTIVACE 366
           KWV+K   I Y +D    ++KARLVAKG+ Q+EG+D+ E FSPV K TS++++L I A  
Sbjct: 139 KWVYK---IKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIY 190

Query: 367 NLEL 369
           N  L
Sbjct: 199 NFTL 190

[Close]

BLAST of MELO.jh101617.1 vs. TAIR 10
Match: ATMG00300.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 86.3 bits (212), Expect = 5.7e-17
Identity = 42/112 (37.50%), Postives = 70/112 (62.50%), Query Frame = 0


Query: 58  GFMKVERQGKVILNSRKVEGLYTVKNVIKPKYALISETEKGNKLELWHRRLSHISEKGLT 117
           G +KV +  + IL   + + LY ++  ++   + ++ET K ++  LWH RL+H+S++G+ 
Sbjct: 27  GVLKVLKGCRTILKGNRHDSLYILQGSVETGESNLAETAK-DETRLWHSRLAHMSQRGME 86

Query: 118 ELQKQGLIQARGVKNLGFCEDYSFSKSKRLKFSKGEHHSKVTLDYVHGDLCG 170
            L K+G + +  V +L FCED  + K+ R+ FS G+H +K  LDYVH DL G
Sbjct: 87  LLVKKGFLDSSKVSSLKFCEDCIYGKTHRVNFSTGQHTTKNPLDYVHSDLWG 137

[Close]

BLAST of MELO.jh101617.1 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 84.0 bits (206), Expect = 2.8e-16
Identity = 47/108 (43.52%), Postives = 70/108 (64.81%), Query Frame = 0


Query: 255 TIEDEPYSYKDALCSRHNNQWKEAMNDELNSLYKNDTWELVETPHGKSIIPCKWVFKKKM 314
           TI+ EP   K  + +  +  W +AM +EL++L +N TW LV  P  ++I+ CKWVFK K+
Sbjct: 23  TIKKEP---KSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKL 82

Query: 315 --IGYLNDKVKFKARLVAKGFEQKEGVDYNEIFSPVVKHTSIRILLTI 361
              G L+   + KARLVAKGF Q+EG+ + E +SPVV+  +IR +L +
Sbjct: 83  HSDGTLD---RLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNV 124

The following BLAST results are available for this feature:

BLAST of MELO.jh101617.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0039651.1	3.28e-226	82.92	retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa]...	[more]
KAA0033501.1	2.16e-179	57.71	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0051442.1	1.00e-150	54.85	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0054988.1	1.20e-150	68.18	hypothetical protein E6C27_scaffold43052G001360 [Cucumis melo var. makuwa]	[more]
KAA0062924.1	1.73e-102	84.70	retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa]...	[more]

BLAST of MELO.jh101617.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	2.8e-24	54.05	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
Q9ZT94	2.5e-17	34.41	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P04146	1.6e-16	30.61	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q94HW2	2.8e-16	35.84	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P93293	8.1e-16	37.50	Uncharacterized mitochondrial protein AtMg00300 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of MELO.jh101617.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BAM8	1.59e-226	82.92	Retrotransposon protein, putative, Ty1-copia subclass OS=Cucumis melo var. makuw...	[more]
A0A5A7SVP7	1.04e-179	57.71	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7U6R2	4.86e-151	54.85	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7UJ23	5.83e-151	68.18	Integrase catalytic domain-containing protein OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5D3D1S7	8.38e-103	84.70	Retrotransposon protein, putative, Ty1-copia subclass OS=Cucumis melo var. makuw...	[more]

BLAST of MELO.jh101617.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	5.7e-17	41.13	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00300.1	5.7e-17	37.50	Gag-Pol-related retrotransposon family protein	[more]
ATMG00820.1	2.8e-16	43.52	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 289..365 e-value: 1.9E-20 score: 73.5
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 78..144 e-value: 2.6E-9 score: 36.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 177..234
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 177..204
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 209..365

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO.jh101617.1.t1	MELO.jh101617.1.t1	mRNA