MELO.jh101530.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh101530.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Descriptioncyclic nucleotide-gated ion channel 1-like isoform X1
Locationchr04: 26916337 .. 26919388 (+)
RNA-Seq ExpressionMELO.jh101530.1
SyntenyMELO.jh101530.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGACCGTTCCTGAGAATTCCATCCCTGGGTTGTCTGATTCTGTTGTTAAGGTAGTTTACGTGGTGTGATTATGGATGTTTTGGTATATTTTTTTCTTAATTTGTGTGGTGAAATGATATTTTCCTGTAATATGAAAAATTAATTTGGTCTTATGTTGAATCATCTCACAGATTAGAGAAGATGTAAAATCTGGTGTAGAAAATTTAACAGAGGAGTGTGTATCCACAATGGCAGCCGTTACTCGGCTTCTAATGAAGGTTTTTATCTTCCTCGTGCTAATATGCGCACCTGAGTGCACCCCTATCCCTGCAACCGTGTACTAAAAAAAAGTTGCAGTTGTCCAAAATGTCTATATATAATTTGTATGCCATCCTTTATATTTTTAATTTTGTAATTTCGTAGATTGGTTGAACTGACTTCAGTATGCGGTTGAAATCATAAACTCAAGATTAATCATCAAGTTTTGGACCTTGTTAAGTGAAATTAGTTCTATTACTAAAGCATGAAAAAAGATAAACTTTAATAAAGATTAGAAAATGTTCGACACTTTATAGTCTTGATTTGTGTCAAAGACTACTTAAAGCATGAAGTCTCTCATCATGATATTGTGAAAAATTGCATGCCTTTAGTAGTTCATGGTCTCCACTGTTCTTCCTTTTCATGGTTAACCTTTTAAAATGAATTGAATACAATTTTAAACACCATCTTTATAATCTCAGAATAATTATGCAGGGTTTATCAGAATAATATGTTTGTTTCTTCAGATATACTTAATATTTCATTGATTGCTCATTCATTTTGGTTTCCATTTTTAGTCGATTATGGTGGCTCACTTTGGAAACTTGTTACATAGCTACTGCCAAAAGCTTTAAATTGCCTTCCGGATGCACCTCAAAATCAGCTTCATTCTTTGTGTTTTCTAATTTCTAGCTCACTCAATTCAGCCATGGAAGTACGGAGGTAAGTAAAGTTCCCTTTTGGAATTCAAGTTCTTCTGTACTTCTTGTTGGAGTTTGAGAGGCATTTTTGTTGTTGTTCTTCTTCTTGCATAACTGTGGTTGTGGAATTTGGGTTTTAGGTAGTGAAAGAACTTGTATTATAGTTTTCTGTGGTAAAAGGAATTGGACCCACTTGCCATATGTTCACTCAATTTGATTTTTTACTGTAAGTTGAGTCAGTTGTGGTCATTTTGAAGGGGTTCAACTGCATCTGGGAAGTTGGGAAGGAGTCAAAAGGGATTTTTTAAGCCAAAACTGACTTCTCTCACTTTGCCAGAATTGACTTCTCTCACTTTCTTTCTCTGCACTTCTAACTTCCAAAGTTTTTGTGATTGTTAGTAGTTTCATCAAGTGTTTGTGTTTGCTACTTGGTTATGCTTCATAATTGCTTTAGATTCACAAAAATACTATAACCTGTAGCCCTGTAATTCTATCCATTTCAGGAGTTTGTGATCTTTTTGTGTGTAGGAACTAACACAAATTGAATATTTAAAAAGTGAAAAGAAGTTGGGTTTGTAGAAAATAAGTGCCATTTGGTTGAGAAGACTACTTTGGAAGATGGTTTTATTTTAACTATGACTGCATTTGCTAGTTTGTTTTTTGGTACTTCATTCACCATCCATTTTCTCTCCATGGTTGAGTTTCTCCCCTCATTTATTTTTTATAACATTCATTAGATCACTCTTTAAATCATTCAATTACAAAGGAAAGGCTACTTCAATTCATCATCAGTAAACTATTTTTTTCCTTTAGTAACAATCACTCACATCATTGTCATTTCTCTATGTATTGTCTATAGACCAGGGCGATTTCTAGTTCTCTTCTAAGATTAAATAATTACCAGCTAATCATTTAGGAAGTATTGCAGTTAAATGGTTGTTGGGTTGTCAACTATACTATTTTTTATCTGTTTTCTGTGTGCGGTTGAAATTCTTCTGATGTCCCCCATCTCCTGTGATTCTTTTCTTCAAAATCAAATAGTAGAAGTATCTGTTGGTTCATTTGTTCCACTTGCTTTGTCCCCTGTCCAGGAGTAAACCTTCGTATATTGGAGAAACATGCTCACTGAGAACATTGAGATCAATTTCAACAAGCTTTACTACTAGTTTTGATAGGCTTACGAGTTTTGGAAACATAAGATTTGATTGAGAAGTTAGGAGTAAAGGTTTGGGATATCTTAAATGTTTGGGTGATAGAAACCCGGTATTTCTTCATTTGTGGAATGAAATACTTGTCATGTTGTGTGTGATTGCTACCTTGTTGGATCCTTTGTTCTGTTACACCTTGTTGGTTGATTAAGGCAAAAGATGTGTTGGATTTGACAACAAGATGAGAATAGTAGTTGTAATTGTTAGCTCAATCATAGACTTCCTCTACATAATTCTTATAGTCTGTCATTTTCATTTTAGATATTCCAAATTTTATAATGCAAAACCTGATGAAGCCGATGATGGTGTTTGCACAAGAGCTTGGAGATTCTTTTTATCTTACTTCACAATTGACGTTCTTTCAGTTCTTCCACTCCCCCAGGTATGAAACTTCAGCCTTTTGCTCGCTTAGATTCTATCAATCTTATTGTCAAATTTGTCCATTCCATTTGTAACCAAGGATTCATTTGTAGGACAAGAAAGATAATCATCATTTAGAATATATATGTGAGAGTGCACACACAAAAACAACTAATTATTCAAGCAGAAACATAAAAGCATAATTTACGGAGCATACTGTCCTAAGTTAAGTTTGTGCTATAACAAGATATCCACTCTTGATGTTAAAACACAAAGTCGTATTGTCTAATCCCTTTAGTAATCTACAAGAACTCCAAAGAAATAAGCTCTGGGTCATTATCAATTTTGTTTTCCATCCTAAAATATTCAATTATTCTCCTCTTTGGGAAATTATTGGAGGATGACCATGATTGAGATCTCAAATCTTTACACCAACAGCTGTTTGAATGTCTTTTCTATCTTTTCTTTCTTCTACACAGGAGGGGTTAAAATTTTCATTTCTTGTGCATTATTAGCCATGCAGGGTTTACAGAAAGATTTGA

mRNA sequence

ATGGAGACCGTTCCTGAGAATTCCATCCCTGGGTTGTCTGATTCTGTTGTTAAGATTAGAGAAGATGTAAAATCTGGTGTAGAAAATTTAACAGAGGAGTGTGTATCCACAATGGCAGCCGTTACTCGGCTTCTAATGAAGTCGATTATGGTGGCTCACTTTGGAAACTTCTCACTCAATTCAGCCATGGAAGTACGGAGATATTCCAAATTTTATAATGCAAAACCTGATGAAGCCGATGATGGTGTTTGCACAAGAGCTTGGAGATTCTTTTTATCTTACTTCACAATTGACGTTCTTTCAGTTCTTCCACTCCCCCAGCCATGCAGGGTTTACAGAAAGATTTGA

Coding sequence (CDS)

ATGGAGACCGTTCCTGAGAATTCCATCCCTGGGTTGTCTGATTCTGTTGTTAAGATTAGAGAAGATGTAAAATCTGGTGTAGAAAATTTAACAGAGGAGTGTGTATCCACAATGGCAGCCGTTACTCGGCTTCTAATGAAGTCGATTATGGTGGCTCACTTTGGAAACTTCTCACTCAATTCAGCCATGGAAGTACGGAGATATTCCAAATTTTATAATGCAAAACCTGATGAAGCCGATGATGGTGTTTGCACAAGAGCTTGGAGATTCTTTTTATCTTACTTCACAATTGACGTTCTTTCAGTTCTTCCACTCCCCCAGCCATGCAGGGTTTACAGAAAGATTTGA

Protein sequence

METVPENSIPGLSDSVVKIREDVKSGVENLTEECVSTMAAVTRLLMKSIMVAHFGNFSLNSAMEVRRYSKFYNAKPDEADDGVCTRAWRFFLSYFTIDVLSVLPLPQPCRVYRKI
Homology
[Close]
BLAST of MELO.jh101530.1 vs. NCBI nr
Match: KAA0051255.1 (kinesin-like protein KIN12B [Cucumis melo var. makuwa])

HSP 1 Score: 92.4 bits (228), Expect = 4.81e-22
Identity = 47/47 (100.00%), Postives = 47/47 (100.00%), Query Frame = 0 

Query: 1  METVPENSIPGLSDSVVKIREDVKSGVENLTEECVSTMAAVTRLLMK 47
          METVPENSIPGLSDSVVKIREDVKSGVENLTEECVSTMAAVTRLLMK
Sbjct: 1  METVPENSIPGLSDSVVKIREDVKSGVENLTEECVSTMAAVTRLLMK 47

[Close]
BLAST of MELO.jh101530.1 vs. NCBI nr
Match: KAA0053632.1 (kinesin-like protein KIN12B [Cucumis melo var. makuwa] >KAA0057263.1 kinesin-like protein KIN12B [Cucumis melo var. makuwa])

HSP 1 Score: 91.3 bits (225), Expect = 1.37e-21
Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 0 

Query: 1  METVPENSIPGLSDSVVKIREDVKSGVENLTEECVSTMAAVTRLLMK 47
          METVP+NSIPGLSDSVVKIREDVKSGVENLTEECVSTMAAVTRLLMK
Sbjct: 1  METVPDNSIPGLSDSVVKIREDVKSGVENLTEECVSTMAAVTRLLMK 47

[Close]
BLAST of MELO.jh101530.1 vs. NCBI nr
Match: KAA0061637.1 (kinesin-like protein KIN-12B isoform X3 [Cucumis melo var. makuwa])

HSP 1 Score: 92.0 bits (227), Expect = 1.89e-21
Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 0 

Query: 1  METVPENSIPGLSDSVVKIREDVKSGVENLTEECVSTMAAVTRLLMK 47
          MET+PENSIPGLSDSVVKIREDVKSGVENLTEECVSTMAAVTRLLMK
Sbjct: 39 METIPENSIPGLSDSVVKIREDVKSGVENLTEECVSTMAAVTRLLMK 85

[Close]
BLAST of MELO.jh101530.1 vs. NCBI nr
Match: TYK22405.1 (uncharacterized protein E5676_scaffold173G00360 [Cucumis melo var. makuwa])

HSP 1 Score: 88.2 bits (217), Expect = 1.79e-20
Identity = 44/47 (93.62%), Postives = 45/47 (95.74%), Query Frame = 0 

Query: 1  METVPENSIPGLSDSVVKIREDVKSGVENLTEECVSTMAAVTRLLMK 47
          METVPENSIPGLSDS+ KIREDVKSGVENLTEECVSTMA VTRLLMK
Sbjct: 1  METVPENSIPGLSDSIAKIREDVKSGVENLTEECVSTMADVTRLLMK 47

[Close]
BLAST of MELO.jh101530.1 vs. NCBI nr
Match: KAA0033569.1 (kinesin-like protein KIN12B [Cucumis melo var. makuwa])

HSP 1 Score: 88.2 bits (217), Expect = 4.57e-20
Identity = 45/46 (97.83%), Postives = 45/46 (97.83%), Query Frame = 0 

Query: 2  ETVPENSIPGLSDSVVKIREDVKSGVENLTEECVSTMAAVTRLLMK 47
          ETVPENSIPGLSDSVVKIREDVKSGVENLTEECVSTMA VTRLLMK
Sbjct: 29 ETVPENSIPGLSDSVVKIREDVKSGVENLTEECVSTMADVTRLLMK 74

[Close]
BLAST of MELO.jh101530.1 vs. ExPASy TrEMBL
Match: A0A5A7UC94 (Kinesin-like protein KIN12B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2143G00110 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 2.33e-22
Identity = 47/47 (100.00%), Postives = 47/47 (100.00%), Query Frame = 0 

Query: 1  METVPENSIPGLSDSVVKIREDVKSGVENLTEECVSTMAAVTRLLMK 47
          METVPENSIPGLSDSVVKIREDVKSGVENLTEECVSTMAAVTRLLMK
Sbjct: 1  METVPENSIPGLSDSVVKIREDVKSGVENLTEECVSTMAAVTRLLMK 47

[Close]
BLAST of MELO.jh101530.1 vs. ExPASy TrEMBL
Match: A0A5A7UCX5 (Kinesin-like protein KIN12B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold135G00010 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 6.65e-22
Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 0 

Query: 1  METVPENSIPGLSDSVVKIREDVKSGVENLTEECVSTMAAVTRLLMK 47
          METVP+NSIPGLSDSVVKIREDVKSGVENLTEECVSTMAAVTRLLMK
Sbjct: 1  METVPDNSIPGLSDSVVKIREDVKSGVENLTEECVSTMAAVTRLLMK 47

[Close]
BLAST of MELO.jh101530.1 vs. ExPASy TrEMBL
Match: A0A5A7V420 (Kinesin-like protein KIN-12B isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold212G00050 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 9.13e-22
Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 0 

Query: 1  METVPENSIPGLSDSVVKIREDVKSGVENLTEECVSTMAAVTRLLMK 47
          MET+PENSIPGLSDSVVKIREDVKSGVENLTEECVSTMAAVTRLLMK
Sbjct: 39 METIPENSIPGLSDSVVKIREDVKSGVENLTEECVSTMAAVTRLLMK 85

[Close]
BLAST of MELO.jh101530.1 vs. ExPASy TrEMBL
Match: A0A5D3DFS7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold173G00360 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 8.67e-21
Identity = 44/47 (93.62%), Postives = 45/47 (95.74%), Query Frame = 0 

Query: 1  METVPENSIPGLSDSVVKIREDVKSGVENLTEECVSTMAAVTRLLMK 47
          METVPENSIPGLSDS+ KIREDVKSGVENLTEECVSTMA VTRLLMK
Sbjct: 1  METVPENSIPGLSDSIAKIREDVKSGVENLTEECVSTMADVTRLLMK 47

[Close]
BLAST of MELO.jh101530.1 vs. ExPASy TrEMBL
Match: A0A5A7SWN0 (Kinesin-like protein KIN12B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2458G00050 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 2.21e-20
Identity = 45/46 (97.83%), Postives = 45/46 (97.83%), Query Frame = 0 

Query: 2  ETVPENSIPGLSDSVVKIREDVKSGVENLTEECVSTMAAVTRLLMK 47
          ETVPENSIPGLSDSVVKIREDVKSGVENLTEECVSTMA VTRLLMK
Sbjct: 29 ETVPENSIPGLSDSVVKIREDVKSGVENLTEECVSTMADVTRLLMK 74

The following BLAST results are available for this feature:
BLAST of MELO.jh101530.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0051255.14.81e-22100.00kinesin-like protein KIN12B [Cucumis melo var. makuwa][more]
KAA0053632.11.37e-2197.87kinesin-like protein KIN12B [Cucumis melo var. makuwa] >KAA0057263.1 kinesin-lik... [more]
KAA0061637.11.89e-2197.87kinesin-like protein KIN-12B isoform X3 [Cucumis melo var. makuwa][more]
TYK22405.11.79e-2093.62uncharacterized protein E5676_scaffold173G00360 [Cucumis melo var. makuwa][more]
KAA0033569.14.57e-2097.83kinesin-like protein KIN12B [Cucumis melo var. makuwa][more]
BLAST of MELO.jh101530.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO.jh101530.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UC942.33e-22100.00Kinesin-like protein KIN12B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf... [more]
A0A5A7UCX56.65e-2297.87Kinesin-like protein KIN12B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf... [more]
A0A5A7V4209.13e-2297.87Kinesin-like protein KIN-12B isoform X3 OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A5D3DFS78.67e-2193.62Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7SWN02.21e-2097.83Kinesin-like protein KIN12B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf... [more]
BLAST of MELO.jh101530.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh101530.1.t1MELO.jh101530.1.t1mRNA