MELO.jh101505.1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh101505.1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	chr04: 24160629 .. 24162667 (+)
RNA-Seq Expression	MELO.jh101505.1
Synteny	MELO.jh101505.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACACTCCTAGTCCTATTAAATCTTTACCTCTCATTTATGCTGCTGACAGCAATTGTATGAATATCACTCACATGGGCACCATCAATACCCCCAGTTTGAATCTTCCCCATACTTACTGTGTCCCAAACTTAACCTTTAATCTAGTATCTGTTGGTCAATTGTGCGACCTTGGCTTAACTGTCTCTTTTTCTCCCAATGGTTGTCAGGTTCAGGATCCGCAGACGGGACAGACGATTGGGACGGGTCGCAAAGTGGGAAGATTGTTTGAGCTCTTATCACTTCAGGTTCCTCATCCATCCATCTCTGCCCCTGTCACTGACTCTGATACATATCAGTGGCATCTTCGTCTTGGTTATGCTTCTCCGGAAAAACTGCGTCATTTAATCTCCATTAACAATTTAAATAGTATTACCAAATTTGTCCCTTTTAATTGTTTAAATTGCAAACTTGCTAAACAACCTGCTTTGTCGTTTTCTACATCCACTTTTATATATGATAAACCTTTTGATTTAATCCATTCTGATATTTGGGGGTCTGCCTCTACCTCAACTGTCCATGGTTATCGCTATTATGTATTATTCATTGATGATTTCTCTCGATTTACATGGGTTTATTTTCTCAAACACCGCTCTGAATTATCTCGCACTTATATTGAGTTTGCTAATATGATTCGCACCCAATTCTCTTATCCCATCAAAACCCTTCGCACTGACAATGCCTTGGAGTATAAAAACTCCACTCTTATATCTTTTCTCTCCCAACAGTGCACTCTTGTTCAGCGCTCCTGCCCCCACACTTCTCAACAAAATGGACGTGCTAAGTGCAAACATCGCCACATTCTTGACTCAGTTTGTGCCCTTCTTCTTTCTGCCTCATTTTGGGAGCACACTATGTTCTCTCGTCTGTCCTCCTTCCACGCCTTCTTATCTAGTCCTCAATCTTTCTTCACTGACACATTTATTGACCTTTTTCCTCTCTCTGAGTCCACTCCTGATAATGAGTTTGCTCAATCTGCACCTACTTCTGCAACCTCGGACCAGTTGTCTATCTCTGATGGATGTCCTGAACCTCCTCCAGACACCCCTCCTCGTCGTTCTACTCGAGTAAGGGAACCTCCTATTCATCTCTAAGATTATCACTGTTTTTATATTATTGTTTCCCTTATTGAACCTACCTTTTATCAAGAGGCTAGTACTGACCCATTATGGCAAAAAGCGATGAATGATGAATTACAGGCTCTTGAAAAGATGCACACTTGGGACTATGTTGACTTACCTCCTGGTAAAAGACCCATTGGCTGCAAGTGGATCTACAAAATCAAGACTCACTCTGATGGTACTATTGAGCGTTATAAAACTCGTCTTGTAGCAAAAGGGTATTCCCAAGAATATGGTATTGACTATGAAGAAACATTTGCTCCTGTGGCTCGGATGACGTCTGTGCGCAATTTACTAGATGTTGCTGCTGCCAAGCAGTGGCCTCTTCTTCAGATGAATGTCAAAAATGCTTTCCTTAATGGGACTCTTTCTGAAGAAGTCTATATGAAGCCACCTCCTGGTACTTCTTCTCCTCCTCACAAGGTGTGCCTCTTGCGTCACGCACTATATGGTCTCAAATAGGCTCCACGAGCTTGGTTTGCCACGTTTAGCTCTACCATCACTCAACTTGGCTTTACTTCCAGTCCTCATGATACTGCACTCTTTACTCGTCACACACCTAGGGTATTGTTCTTCTTCTTCTCTATGTTGATGACATGATTATGACTAGTAATGATCCACAGGCCATATCTGATCTCCAACATTACCTTGGTCAACATTTTGAAATGAAAGAACTTGGGTCTCTCAACTACTTTCTTGGTCTTGAAGTCTCTCAACGCTCAGACGGGTATCTATTGTCCCAAGCTAAATATGTCTCTGATCTTTTAGCTCGCTCAGAAATCACTGACTCTAACACAGTTTCAACGCCGTTAGATCCCAATGTTCATTTTACCCCTTATGATGGTGTTCCTCTTGAAGATGTCAGTCTGTATCAGTAA

mRNA sequence

ATGAACACTCCTAGTCCTATTAAATCTTTACCTCTCATTTATGCTGCTGACAGCAATTGTATGAATATCACTCACATGGGCACCATCAATACCCCCAGTTTGAATCTTCCCCATACTTACTGTGTCCCAAACTTAACCTTTAATCTAGTATCTGTTGGTCAATTGTGCGACCTTGGCTTAACTGTCTCTTTTTCTCCCAATGGTTGTCAGGTTCAGGATCCGCAGACGGGACAGACGATTGGGACGGGTCGCAAAGTGGGAAGATTGTTTGAGCTCTTATCACTTCAGGTTCCTCATCCATCCATCTCTGCCCCTGTCACTGACTCTGATACATATCAGTGGCATCTTCGTCTTGGTTATGCTTCTCCGGAAAAACTGCGTCATTTAATCTCCATTAACAATTTAAATAGTATTACCAAATTTGTCCCTTTTAATTGTTTAAATTGCAAACTTGCTAAACAACCTGCTTTGTCGTTTTCTACATCCACTTTTATATATGATAAACCTTTTGATTTAATCCATTCTGATATTTGGGGGTCTGCCTCTACCTCAACTGTCCATGGTTATCGCTATTATGTATTATTCATTGATGATTTCTCTCGATTTACATGGGTTTATTTTCTCAAACACCGCTCTGAATTATCTCGCACTTATATTGAGTTTGCTAATATGATTCGCACCCAATTCTCTTATCCCATCAAAACCCTTCGCACTGACAATGCCTTGGAGTATAAAAACTCCACTCTTATATCTTTTCTCTCCCAACAGTGCACTCTTGTTCAGCGCTCCTGCCCCCACACTTCTCAACAAAATGGACGTGCTAAGTGCAAACATCGCCACATTCTTGACTCAGTTTGTGCCCTTCTTCTTTCTGCCTCATTTTGGGAGCACACTATGTTCTCTCGTCTGTCCTCCTTCCACGCCTTCTTATCTAGTCCTCAATCTTTCTTCACTGACACATTTATTGACCTTTTTCCTCTCTCTGAGTCCACTCCTGATAATGAGTTTGCTCAATCTGCACCTACTTCTGCAACCTCGGACCAGTTGTCTATCTCTGATGGATGTCCTGAACCTCCTCCAGACACCCCTCCTCGTCGTTCTACTCGAGCTAGTACTGACCCATTATGGCAAAAAGCGATGAATGATGAATTACAGGCTCTTGAAAAGATGCACACTTGGGACTATGTTGACTTACCTCCTGGTAAAAGACCCATTGGCTGCAAGTGGATCTACAAAATCAAGACTCACTCTGATGGTACTATTGAGCGTTATAAAACTCGTCTTGTAGCAAAAGGGTATTCCCAAGAATATGGTATTGACTATGAAGAAACATTTGCTCCTGTGGCTCGGATGACGTCTGTGCGCAATTTACTAGATGTTGCTGCTGCCAAGCAGTGGCCTCTTCTTCAGATGAATGTCAAAAATGCTTTCCTTAATGGGACTCTTTCTGAAGAAGTCTATATGAAGCCACCTCCTGGTACTTCTTCTCCTCCTCACAAGGGTATTGTTCTTCTTCTTCTCTATGTTGATGACATGATTATGACTAGTAATGATCCACAGGCCATATCTGATCTCCAACATTACCTTGGTCAACATTTTGAAATGAAAGAACTTGGGTCTCTCAACTACTTTCTTGGTCTTGAAGTCTCTCAACGCTCAGACGGGTATCTATTGTCCCAAGCTAAATATGTCTCTGATCTTTTAGCTCGCTCAGAAATCACTGACTCTAACACAGTTTCAACGCCGTTAGATCCCAATGTTCATTTTACCCCTTATGATGGTGTTCCTCTTGAAGATGTCAGTCTGTATCAGTAA

Coding sequence (CDS)

ATGAACACTCCTAGTCCTATTAAATCTTTACCTCTCATTTATGCTGCTGACAGCAATTGTATGAATATCACTCACATGGGCACCATCAATACCCCCAGTTTGAATCTTCCCCATACTTACTGTGTCCCAAACTTAACCTTTAATCTAGTATCTGTTGGTCAATTGTGCGACCTTGGCTTAACTGTCTCTTTTTCTCCCAATGGTTGTCAGGTTCAGGATCCGCAGACGGGACAGACGATTGGGACGGGTCGCAAAGTGGGAAGATTGTTTGAGCTCTTATCACTTCAGGTTCCTCATCCATCCATCTCTGCCCCTGTCACTGACTCTGATACATATCAGTGGCATCTTCGTCTTGGTTATGCTTCTCCGGAAAAACTGCGTCATTTAATCTCCATTAACAATTTAAATAGTATTACCAAATTTGTCCCTTTTAATTGTTTAAATTGCAAACTTGCTAAACAACCTGCTTTGTCGTTTTCTACATCCACTTTTATATATGATAAACCTTTTGATTTAATCCATTCTGATATTTGGGGGTCTGCCTCTACCTCAACTGTCCATGGTTATCGCTATTATGTATTATTCATTGATGATTTCTCTCGATTTACATGGGTTTATTTTCTCAAACACCGCTCTGAATTATCTCGCACTTATATTGAGTTTGCTAATATGATTCGCACCCAATTCTCTTATCCCATCAAAACCCTTCGCACTGACAATGCCTTGGAGTATAAAAACTCCACTCTTATATCTTTTCTCTCCCAACAGTGCACTCTTGTTCAGCGCTCCTGCCCCCACACTTCTCAACAAAATGGACGTGCTAAGTGCAAACATCGCCACATTCTTGACTCAGTTTGTGCCCTTCTTCTTTCTGCCTCATTTTGGGAGCACACTATGTTCTCTCGTCTGTCCTCCTTCCACGCCTTCTTATCTAGTCCTCAATCTTTCTTCACTGACACATTTATTGACCTTTTTCCTCTCTCTGAGTCCACTCCTGATAATGAGTTTGCTCAATCTGCACCTACTTCTGCAACCTCGGACCAGTTGTCTATCTCTGATGGATGTCCTGAACCTCCTCCAGACACCCCTCCTCGTCGTTCTACTCGAGCTAGTACTGACCCATTATGGCAAAAAGCGATGAATGATGAATTACAGGCTCTTGAAAAGATGCACACTTGGGACTATGTTGACTTACCTCCTGGTAAAAGACCCATTGGCTGCAAGTGGATCTACAAAATCAAGACTCACTCTGATGGTACTATTGAGCGTTATAAAACTCGTCTTGTAGCAAAAGGGTATTCCCAAGAATATGGTATTGACTATGAAGAAACATTTGCTCCTGTGGCTCGGATGACGTCTGTGCGCAATTTACTAGATGTTGCTGCTGCCAAGCAGTGGCCTCTTCTTCAGATGAATGTCAAAAATGCTTTCCTTAATGGGACTCTTTCTGAAGAAGTCTATATGAAGCCACCTCCTGGTACTTCTTCTCCTCCTCACAAGGGTATTGTTCTTCTTCTTCTCTATGTTGATGACATGATTATGACTAGTAATGATCCACAGGCCATATCTGATCTCCAACATTACCTTGGTCAACATTTTGAAATGAAAGAACTTGGGTCTCTCAACTACTTTCTTGGTCTTGAAGTCTCTCAACGCTCAGACGGGTATCTATTGTCCCAAGCTAAATATGTCTCTGATCTTTTAGCTCGCTCAGAAATCACTGACTCTAACACAGTTTCAACGCCGTTAGATCCCAATGTTCATTTTACCCCTTATGATGGTGTTCCTCTTGAAGATGTCAGTCTGTATCAGTAA

Protein sequence

MNTPSPIKSLPLIYAADSNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLGLTVSFSPNGCQVQDPQTGQTIGTGRKVGRLFELLSLQVPHPSISAPVTDSDTYQWHLRLGYASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTFIYDKPFDLIHSDIWGSASTSTVHGYRYYVLFIDDFSRFTWVYFLKHRSELSRTYIEFANMIRTQFSYPIKTLRTDNALEYKNSTLISFLSQQCTLVQRSCPHTSQQNGRAKCKHRHILDSVCALLLSASFWEHTMFSRLSSFHAFLSSPQSFFTDTFIDLFPLSESTPDNEFAQSAPTSATSDQLSISDGCPEPPPDTPPRRSTRASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKTRLVAKGYSQEYGIDYEETFAPVARMTSVRNLLDVAAAKQWPLLQMNVKNAFLNGTLSEEVYMKPPPGTSSPPHKGIVLLLLYVDDMIMTSNDPQAISDLQHYLGQHFEMKELGSLNYFLGLEVSQRSDGYLLSQAKYVSDLLARSEITDSNTVSTPLDPNVHFTPYDGVPLEDVSLYQ

Homology

[Close]

BLAST of MELO.jh101505.1 vs. NCBI nr
Match: TYK19656.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 1053 bits (2722), Expect = 0.0
Identity = 561/778 (72.11%), Postives = 574/778 (73.78%), Query Frame = 0


Query: 1    MNTPSPIKSLPLIYAADSNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLGL 60
            MNTPSP KSLP IYAAD NCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLG 
Sbjct: 337  MNTPSPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLGF 396

Query: 61   TVSFSPNGCQVQDPQTGQTIGTGRKVGRLFELLSLQVPHPSISAPVTDSDTYQWHLRLGY 120
            TVSFS NGCQVQDPQTGQTIGTGRKVGRLFELLSLQVP PSISAPVTDSDTYQWHLRLG+
Sbjct: 397  TVSFSSNGCQVQDPQTGQTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGH 456

Query: 121  ASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTFIYDKPFDLIHSDIWGS 180
            ASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTST I DKPFDLIHSDIWG 
Sbjct: 457  ASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTSICDKPFDLIHSDIWGP 516

Query: 181  ASTSTVHGYRYYVLFIDDFSRFTWVYFLKHRSELSRTYIEFANMIRTQFSYPIKTLRTDN 240
            A TSTVHGYRYYVLFIDDFSRFTW+YFLKHRSELSRTYIEFANMIRTQFS PIKTLRTDN
Sbjct: 517  APTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDN 576

Query: 241  ALEYKNSTLISFLSQQCTLVQRSCPHTSQQNGRAKCKHRHILDSVCALLLSAS------- 300
            ALEYK+STL+SFLSQQ TLVQRSCPHTSQQNGRA+ KHRHILDSV ALLLSAS       
Sbjct: 577  ALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWG 636

Query: 301  ------------------------------------------------------------ 360
                                                                        
Sbjct: 637  EAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRA 696

Query: 361  --------------------------------FWEHTMFSRLSSFHAFLSSPQSFFTDTF 420
                                            FWEHTMFSRLSSFHA  SSPQSFFTDT 
Sbjct: 697  RLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTS 756

Query: 421  IDLFPLSESTPDNEFAQSAPTSATSDQLSISDGCPEPPPDTPPRRSTR------------ 480
            IDLFPLSESTP NE AQSAPTSATSDQ SISDG P+PPPD PPRRSTR            
Sbjct: 757  IDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPRRSTRVREPPIHLQDYH 816

Query: 481  ----------------ASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKI 540
                            ASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKI
Sbjct: 817  CFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKI 876

Query: 541  KTHSDGTIERYKTRLVAKGYSQEYGIDYEETFAPVARMTSVRNLLDVAAAKQWPLLQMNV 600
            KTHSDGTIERYK RLVAKGYSQEYGIDYEETFAPVARMTSVR+LL VAAAKQWPLLQM+V
Sbjct: 877  KTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDV 936

Query: 601  KNAFLNGTLSEEVYMKPPPGTSSPPHK--------------------------------- 604
            KNAFLNGTLSEEVYMKPPPGTSSPPHK                                 
Sbjct: 937  KNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTS 996

[Close]

BLAST of MELO.jh101505.1 vs. NCBI nr
Match: KAA0041601.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >KAA0065379.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK12000.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 1053 bits (2722), Expect = 0.0
Identity = 561/778 (72.11%), Postives = 574/778 (73.78%), Query Frame = 0


Query: 1    MNTPSPIKSLPLIYAADSNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLGL 60
            MNTPSP KSLP IYAAD NCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLG 
Sbjct: 337  MNTPSPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLGF 396

Query: 61   TVSFSPNGCQVQDPQTGQTIGTGRKVGRLFELLSLQVPHPSISAPVTDSDTYQWHLRLGY 120
            TVSFS NGCQVQDPQTGQTIGTGRKVGRLFELLSLQVP PSISAPVTDSDTYQWHLRLG+
Sbjct: 397  TVSFSSNGCQVQDPQTGQTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGH 456

Query: 121  ASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTFIYDKPFDLIHSDIWGS 180
            ASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTST I DKPFDLIHSDIWG 
Sbjct: 457  ASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTSICDKPFDLIHSDIWGP 516

Query: 181  ASTSTVHGYRYYVLFIDDFSRFTWVYFLKHRSELSRTYIEFANMIRTQFSYPIKTLRTDN 240
            A TSTVHGYRYYVLFIDDFSRFTW+YFLKHRSELSRTYIEFANMIRTQFS PIKTLRTDN
Sbjct: 517  APTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDN 576

Query: 241  ALEYKNSTLISFLSQQCTLVQRSCPHTSQQNGRAKCKHRHILDSVCALLLSAS------- 300
            ALEYK+STL+SFLSQQ TLVQRSCPHTSQQNGRA+ KHRHILDSV ALLLSAS       
Sbjct: 577  ALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWG 636

Query: 301  ------------------------------------------------------------ 360
                                                                        
Sbjct: 637  EAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRA 696

Query: 361  --------------------------------FWEHTMFSRLSSFHAFLSSPQSFFTDTF 420
                                            FWEHTMFSRLSSFHA  SSPQSFFTDT 
Sbjct: 697  RLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTS 756

Query: 421  IDLFPLSESTPDNEFAQSAPTSATSDQLSISDGCPEPPPDTPPRRSTR------------ 480
            IDLFPLSESTP NE AQSAPTSATSDQ SISDG P+PPPD PPRRSTR            
Sbjct: 757  IDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPRRSTRVREPPIHLQDYH 816

Query: 481  ----------------ASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKI 540
                            ASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKI
Sbjct: 817  CFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKI 876

Query: 541  KTHSDGTIERYKTRLVAKGYSQEYGIDYEETFAPVARMTSVRNLLDVAAAKQWPLLQMNV 600
            KTHSDGTIERYK RLVAKGYSQEYGIDYEETFAPVARMTSVR+LL VAAAKQWPLLQM+V
Sbjct: 877  KTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDV 936

Query: 601  KNAFLNGTLSEEVYMKPPPGTSSPPHK--------------------------------- 604
            KNAFLNGTLSEEVYMKPPPGTSSPPHK                                 
Sbjct: 937  KNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTS 996

[Close]

BLAST of MELO.jh101505.1 vs. NCBI nr
Match: TYK04714.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 1053 bits (2722), Expect = 0.0
Identity = 561/778 (72.11%), Postives = 574/778 (73.78%), Query Frame = 0


Query: 1    MNTPSPIKSLPLIYAADSNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLGL 60
            MNTPSP KSLP IYAAD NCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLG 
Sbjct: 337  MNTPSPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLGF 396

Query: 61   TVSFSPNGCQVQDPQTGQTIGTGRKVGRLFELLSLQVPHPSISAPVTDSDTYQWHLRLGY 120
            TVSFS NGCQVQDPQTGQTIGTGRKVGRLFELLSLQVP PSISAPVTDSDTYQWHLRLG+
Sbjct: 397  TVSFSSNGCQVQDPQTGQTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGH 456

Query: 121  ASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTFIYDKPFDLIHSDIWGS 180
            ASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTST I DKPFDLIHSDIWG 
Sbjct: 457  ASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTSICDKPFDLIHSDIWGP 516

Query: 181  ASTSTVHGYRYYVLFIDDFSRFTWVYFLKHRSELSRTYIEFANMIRTQFSYPIKTLRTDN 240
            A TSTVHGYRYYVLFIDDFSRFTW+YFLKHRSELSRTYIEFANMIRTQFS PIKTLRTDN
Sbjct: 517  APTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDN 576

Query: 241  ALEYKNSTLISFLSQQCTLVQRSCPHTSQQNGRAKCKHRHILDSVCALLLSAS------- 300
            ALEYK+STL+SFLSQQ TLVQRSCPHTSQQNGRA+ KHRHILDSV ALLLSAS       
Sbjct: 577  ALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWG 636

Query: 301  ------------------------------------------------------------ 360
                                                                        
Sbjct: 637  EAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRA 696

Query: 361  --------------------------------FWEHTMFSRLSSFHAFLSSPQSFFTDTF 420
                                            FWEHTMFSRLSSFHA  SSPQSFFTDT 
Sbjct: 697  RLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTS 756

Query: 421  IDLFPLSESTPDNEFAQSAPTSATSDQLSISDGCPEPPPDTPPRRSTR------------ 480
            IDLFPLSESTP NE AQSAPTSATSDQ SISDG P+PPPD PPRRSTR            
Sbjct: 757  IDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPRRSTRVREPPIHLQDYH 816

Query: 481  ----------------ASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKI 540
                            ASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKI
Sbjct: 817  CFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKI 876

Query: 541  KTHSDGTIERYKTRLVAKGYSQEYGIDYEETFAPVARMTSVRNLLDVAAAKQWPLLQMNV 600
            KTHSDGTIERYK RLVAKGYSQEYGIDYEETFAPVARMTSVR+LL VAAAKQWPLLQM+V
Sbjct: 877  KTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDV 936

Query: 601  KNAFLNGTLSEEVYMKPPPGTSSPPHK--------------------------------- 604
            KNAFLNGTLSEEVYMKPPPGTSSPPHK                                 
Sbjct: 937  KNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTS 996

[Close]

BLAST of MELO.jh101505.1 vs. NCBI nr
Match: KAA0037745.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 1051 bits (2719), Expect = 0.0
Identity = 560/778 (71.98%), Postives = 574/778 (73.78%), Query Frame = 0


Query: 1    MNTPSPIKSLPLIYAADSNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLGL 60
            MNTPSP KSLP IYAAD NCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLG 
Sbjct: 337  MNTPSPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLGF 396

Query: 61   TVSFSPNGCQVQDPQTGQTIGTGRKVGRLFELLSLQVPHPSISAPVTDSDTYQWHLRLGY 120
            TVSFS NGCQVQDPQTGQTIGTGRKVGRLFE+LSLQVP PSISAPVTDSDTYQWHLRLG+
Sbjct: 397  TVSFSSNGCQVQDPQTGQTIGTGRKVGRLFEVLSLQVPSPSISAPVTDSDTYQWHLRLGH 456

Query: 121  ASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTFIYDKPFDLIHSDIWGS 180
            ASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTST I DKPFDLIHSDIWG 
Sbjct: 457  ASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTSICDKPFDLIHSDIWGP 516

Query: 181  ASTSTVHGYRYYVLFIDDFSRFTWVYFLKHRSELSRTYIEFANMIRTQFSYPIKTLRTDN 240
            A TSTVHGYRYYVLFIDDFSRFTW+YFLKHRSELSRTYIEFANMIRTQFS PIKTLRTDN
Sbjct: 517  APTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDN 576

Query: 241  ALEYKNSTLISFLSQQCTLVQRSCPHTSQQNGRAKCKHRHILDSVCALLLSAS------- 300
            ALEYK+STL+SFLSQQ TLVQRSCPHTSQQNGRA+ KHRHILDSV ALLLSAS       
Sbjct: 577  ALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWG 636

Query: 301  ------------------------------------------------------------ 360
                                                                        
Sbjct: 637  EAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRA 696

Query: 361  --------------------------------FWEHTMFSRLSSFHAFLSSPQSFFTDTF 420
                                            FWEHTMFSRLSSFHA  SSPQSFFTDT 
Sbjct: 697  RLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTS 756

Query: 421  IDLFPLSESTPDNEFAQSAPTSATSDQLSISDGCPEPPPDTPPRRSTR------------ 480
            IDLFPLSESTP NE AQSAPTSATSDQ SISDG P+PPPD PPRRSTR            
Sbjct: 757  IDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPRRSTRVREPPIHLQDYH 816

Query: 481  ----------------ASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKI 540
                            ASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKI
Sbjct: 817  CFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKI 876

Query: 541  KTHSDGTIERYKTRLVAKGYSQEYGIDYEETFAPVARMTSVRNLLDVAAAKQWPLLQMNV 600
            KTHSDGTIERYK RLVAKGYSQEYGIDYEETFAPVARMTSVR+LL VAAAKQWPLLQM+V
Sbjct: 877  KTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDV 936

Query: 601  KNAFLNGTLSEEVYMKPPPGTSSPPHK--------------------------------- 604
            KNAFLNGTLSEEVYMKPPPGTSSPPHK                                 
Sbjct: 937  KNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTS 996

[Close]

BLAST of MELO.jh101505.1 vs. NCBI nr
Match: TYK26360.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 1051 bits (2718), Expect = 0.0
Identity = 560/778 (71.98%), Postives = 573/778 (73.65%), Query Frame = 0


Query: 1    MNTPSPIKSLPLIYAADSNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLGL 60
            MNTPSP KSLP IYAAD NCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLG 
Sbjct: 337  MNTPSPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLGF 396

Query: 61   TVSFSPNGCQVQDPQTGQTIGTGRKVGRLFELLSLQVPHPSISAPVTDSDTYQWHLRLGY 120
            TVSFS NGCQVQDPQTGQTIGTGRKVGRLFELLSLQVP PSISAPVTDSDTYQWHLRLG+
Sbjct: 397  TVSFSSNGCQVQDPQTGQTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGH 456

Query: 121  ASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTFIYDKPFDLIHSDIWGS 180
            ASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTST I DKPFDLIHSDIWG 
Sbjct: 457  ASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTSICDKPFDLIHSDIWGP 516

Query: 181  ASTSTVHGYRYYVLFIDDFSRFTWVYFLKHRSELSRTYIEFANMIRTQFSYPIKTLRTDN 240
            A TSTVHGYRYYVLFIDDFSRFTW+YFLKHRSELSRTYIEFANMIRTQFS PIKTLRTDN
Sbjct: 517  APTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDN 576

Query: 241  ALEYKNSTLISFLSQQCTLVQRSCPHTSQQNGRAKCKHRHILDSVCALLLSAS------- 300
            ALEYK+STL+SFLSQQ TLVQRSCPHTSQQNGRA+ KHRHILDSV ALLLSAS       
Sbjct: 577  ALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWG 636

Query: 301  ------------------------------------------------------------ 360
                                                                        
Sbjct: 637  EAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRA 696

Query: 361  --------------------------------FWEHTMFSRLSSFHAFLSSPQSFFTDTF 420
                                            FWEHTMFSRLSSFHA  SSPQSFFTDT 
Sbjct: 697  RLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTS 756

Query: 421  IDLFPLSESTPDNEFAQSAPTSATSDQLSISDGCPEPPPDTPPRRSTR------------ 480
            IDLFPLSESTP NE AQSAPTSATSDQ SISDG P+PPPD PPRRSTR            
Sbjct: 757  IDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPRRSTRVREPPIHLQDYH 816

Query: 481  ----------------ASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKI 540
                            ASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKI
Sbjct: 817  CFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKI 876

Query: 541  KTHSDGTIERYKTRLVAKGYSQEYGIDYEETFAPVARMTSVRNLLDVAAAKQWPLLQMNV 600
            KTHSDGTIERYK RLVAKGYSQEYGIDYEETFAPVARMTSVR+LL VAAAKQWPLLQM+V
Sbjct: 877  KTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDV 936

Query: 601  KNAFLNGTLSEEVYMKPPPGTSSPPHK--------------------------------- 604
            KNAFLNGTLSEEVYMKPPPGTSSPPHK                                 
Sbjct: 937  KNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTS 996

[Close]

BLAST of MELO.jh101505.1 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 3.4e-72
Identity = 240/892 (26.91%), Postives = 358/892 (40.13%), Query Frame = 0


Query: 13   IYAADSNCMNITHMG--TINTPS--LNLPHTYCVPNLTFNLVSVGQLCDL-GLTVSFSPN 72
            +  AD + + I+H G  +++T S  LNL +   VPN+  NL+SV +LC+  G++V F P 
Sbjct: 360  VMVADGSTIPISHTGSTSLSTKSRPLNLHNILYVPNIHKNLISVYRLCNANGVSVEFFPA 419

Query: 73   GCQVQDPQTGQTIGTGRKVGRLFEL-LSLQVPHPSISAPVTDSDTYQWHLRLGYASPEKL 132
              QV+D  TG  +  G+    L+E  ++   P    ++P + +    WH RLG+ +P  L
Sbjct: 420  SFQVKDLNTGVPLLQGKTKDELYEWPIASSQPVSLFASPSSKATHSSWHARLGHPAPSIL 479

Query: 133  RHLI---SINNLNSITKFVPFNCLNCKLAKQPALSFSTSTFIYDKPFDLIHSDIWGSAST 192
              +I   S++ LN   KF+  +C +C + K   + FS ST    +P + I+SD+W S   
Sbjct: 480  NSVISNYSLSVLNPSHKFL--SCSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWSSPIL 539

Query: 193  STVHGYRYYVLFIDDFSRFTWVYFLKHRSELSRTYIEFANMIRTQFSYPIKTLRTDNALE 252
            S    YRYYV+F+D F+R+TW+Y LK +S++  T+I F N++  +F   I T  +DN  E
Sbjct: 540  SH-DNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGE 599

Query: 253  YKNSTLISFLSQQCTLVQRSCPHTSQQNGRAKCKHRHILDSVCALLLSAS----FWE--- 312
            +    L  + SQ       S PHT + NG ++ KHRHI+++   LL  AS    +W    
Sbjct: 600  F--VALWEYFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAF 659

Query: 313  ------------------------------------------------------------ 372
                                                                        
Sbjct: 660  AVAVYLINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQC 719

Query: 373  ---------------HTMFSRL---------------SSFHAFL---------------- 432
                           H   SRL               S++ A L                
Sbjct: 720  VFLGYSLTQSAYLCLHLQTSRLYISRHVRFDENCFPFSNYLATLSPVQEQRRESSCVWSP 779

Query: 433  --------------------------SSPQSFFTD----------TFIDLFP-------- 492
                                      SSP + F +          +F   FP        
Sbjct: 780  HTTLPTRTPVLPAPSCSDPHHAATPPSSPSAPFRNSQVSSSNLDSSFSSSFPSSPEPTAP 839

Query: 493  -----------------------LSESTPDNE--------------FAQSAPTSATSDQL 552
                                    S++ P NE               + S+P+  TS   
Sbjct: 840  RQNGPQPTTQPTQTQTQTHSSQNTSQNNPTNESPSQLAQSLSTPAQSSSSSPSPTTSASS 899

Query: 553  SISDGCP-----EPPP------------------------------------------DT 605
            S +   P      PPP                                          ++
Sbjct: 900  SSTSPTPPSILIHPPPPLAQIVNNNNQAPLNTHSMGTRAKAGIIKPNPKYSLAVSLAAES 959

[Close]

BLAST of MELO.jh101505.1 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.3e-66
Identity = 231/894 (25.84%), Postives = 343/894 (38.37%), Query Frame = 0


Query: 13   IYAADSNCMNITHMGTINTP----SLNLPHTYCVPNLTFNLVSVGQLCDLG-LTVSFSPN 72
            +  AD + + ITH G+ + P    SL+L     VPN+  NL+SV +LC+   ++V F P 
Sbjct: 339  VMIADGSTIPITHTGSASLPTSSRSLDLNKVLYVPNIHKNLISVYRLCNTNRVSVEFFPA 398

Query: 73   GCQVQDPQTGQTIGTGRKVGRLFEL-LSLQVPHPSISAPVTDSDTYQWHLRLGYASPEKL 132
              QV+D  TG  +  G+    L+E  ++        ++P + +    WH RLG+ S   L
Sbjct: 399  SFQVKDLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHSSWHSRLGHPSLAIL 458

Query: 133  RHLISINNLNSIT-KFVPFNCLNCKLAKQPALSFSTSTFIYDKPFDLIHSDIWGSASTST 192
              +IS ++L  +       +C +C + K   + FS ST    KP + I+SD+W S   S 
Sbjct: 459  NSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVWSSPILS- 518

Query: 193  VHGYRYYVLFIDDFSRFTWVYFLKHRSELSRTYIEFANMIRTQFSYPIKTLRTDNALEYK 252
            +  YRYYV+F+D F+R+TW+Y LK +S++  T+I F +++  +F   I TL +DN  E+ 
Sbjct: 519  IDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEF- 578

Query: 253  NSTLISFLSQQCTLVQRSCPHTSQQNGRAKCKHRHILDSVCALLLSAS----FWEHT--- 312
               L  +LSQ       S PHT + NG ++ KHRHI++    LL  AS    +W +    
Sbjct: 579  -VVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFSV 638

Query: 313  ---MFSRL--------SSFHAFLSSPQSF------------------------------- 372
               + +RL        S F      P ++                               
Sbjct: 639  AVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQCAF 698

Query: 373  --------------------FTDTFIDL----FPLSE-----STPDNEFAQSAP------ 432
                                +T   +      FP S      ST   + + SAP      
Sbjct: 699  MGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTNFGVSTSQEQRSDSAPNWPSHT 758

Query: 433  ----------------------------------TSATSDQL------------------ 492
                                              T  +S  L                  
Sbjct: 759  TLPTTPLVLPAPPCLGPHLDTSPRPPSSPSPLCTTQVSSSNLPSSSISSPSSSEPTAPSH 818

Query: 493  ------------------------------------------------------------ 552
                                                                        
Sbjct: 819  NGPQPTAQPHQTQNSNSNSPILNNPNPNSPSPNSPNQNSPLPQSPISSPHIPTPSTSISE 878

Query: 553  -----SISDGCPEPPPDTP----------------------------------------- 605
                 S S   P  PP  P                                         
Sbjct: 879  PNSPSSSSTSTPPLPPVLPAPPIIQVNAQAPVNTHSMATRAKDGIRKPNQKYSYATSLAA 938

[Close]

BLAST of MELO.jh101505.1 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 4.3e-51
Identity = 191/734 (26.02%), Postives = 301/734 (41.01%), Query Frame = 0


Query: 42   VPNLTFNLVSVGQLCDLGLTVSFSPNGCQVQDPQTGQTIGTGRKVGRLFELLSLQVPHPS 101
            VP+L  NL+S   L   G    F+    ++   +    I  G   G L+   + ++    
Sbjct: 356  VPDLRMNLISGIALDRDGYESYFANQKWRL--TKGSLVIAKGVARGTLYR-TNAEICQGE 415

Query: 102  ISAPVTDSDTYQWHLRLGYASPEKLRHLISINNLNSITKFVPFN-CLNCKLAKQPALSFS 161
            ++A   +     WH R+G+ S EK   +++  +L S  K      C  C   KQ  +SF 
Sbjct: 416  LNAAQDEISVDLWHKRMGHMS-EKGLQILAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQ 475

Query: 162  TSTFIYDKPFDLIHSDIWGSASTSTVHGYRYYVLFIDDFSRFTWVYFLKHRSELSRTYIE 221
            TS+       DL++SD+ G     ++ G +Y+V FIDD SR  WVY LK + ++ + + +
Sbjct: 476  TSSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQK 535

Query: 222  FANMIRTQFSYPIKTLRTDNALEYKNSTLISFLSQQCTLVQRSCPHTSQQNGRAKCKHRH 281
            F  ++  +    +K LR+DN  EY +     + S      +++ P T Q NG A+  +R 
Sbjct: 536  FHALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRT 595

Query: 282  ILDSVCALL----LSASFWEHT------MFSRLSSFHAFLSSPQSFFTDTFIDLFPL--- 341
            I++ V ++L    L  SFW         + +R  S       P+  +T+  +    L   
Sbjct: 596  IVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVF 655

Query: 342  -----------------SESTP-------DNEF--------------------------- 401
                              +S P       D EF                           
Sbjct: 656  GCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESEVRT 715

Query: 402  ---------------------AQSAPTSA--TSDQLS---------------ISDGCPEP 461
                                   + PTSA  T+D++S               + +G  E 
Sbjct: 716  AADMSEKVKNGIIPNFVTIPSTSNNPTSAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEV 775

Query: 462  PPDT-------PPRRSTRASTDP------------------------------LWQKAMN 521
               T       P RRS R   +                                  KAM 
Sbjct: 776  EHPTQGEEQHQPLRRSERPRVESRRYPSTEYVLISDDREPESLKEVLSHPEKNQLMKAMQ 835

Query: 522  DELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKTRLVAKGYSQEYGIDY 581
            +E+++L+K  T+  V+LP GKRP+ CKW++K+K   D  + RYK RLV KG+ Q+ GID+
Sbjct: 836  EEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDF 895

Query: 582  EETFAPVARMTSVRNLLDVAAAKQWPLLQMNVKNAFLNGTLSEEVYMKPPPG-------- 584
            +E F+PV +MTS+R +L +AA+    + Q++VK AFL+G L EE+YM+ P G        
Sbjct: 896  DEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKH 955

[Close]

BLAST of MELO.jh101505.1 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 157.1 bits (396), Expect = 6.1e-37
Identity = 85/263 (32.32%), Postives = 136/263 (51.71%), Query Frame = 0


Query: 376  WQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKTRLVAKGYSQ 435
            W++A+N EL A +  +TW     P  K  +  +W++ +K +  G   RYK RLVA+G++Q
Sbjct: 906  WEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQ 965

Query: 436  EYGIDYEETFAPVARMTSVRNLLDVAAAKQWPLLQMNVKNAFLNGTLSEEVYMKPPPGTS 495
            +Y IDYEETFAPVAR++S R +L +       + QM+VK AFLNGTL EE+YM+ P G S
Sbjct: 966  KYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQGIS 1025

Query: 496  SPP------HKGI-------------------------------------------VLLL 555
                     +K I                                           + +L
Sbjct: 1026 CNSDNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVL 1085

Query: 556  LYVDDMIMTSNDPQAISDLQHYLGQHFEMKELGSLNYFLGLEVSQRSDGYLLSQAKYVSD 590
            LYVDD+++ + D   +++ + YL + F M +L  + +F+G+ +  + D   LSQ+ YV  
Sbjct: 1086 LYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKK 1145

HSP 2 Score: 84.3 bits (207), Expect = 5.0e-15
Identity = 67/261 (25.67%), Postives = 121/261 (46.36%), Query Frame = 0


Query: 48  NLVSVGQLCDLGLTVSFSPNGCQVQDPQTGQTIGTGRKVGRLFELLSLQVPHPSISAPVT 107
           NL+SV +L + G+++ F  +G  +    +   +   +  G L  +  +     SI+A   
Sbjct: 357 NLMSVKRLQEAGMSIEFDKSGVTI----SKNGLMVVKNSGMLNNVPVINFQAYSINAK-H 416

Query: 108 DSDTYQWHLRLGYASPEKL-----RHLIS----INNLNSITKFVPFNCLNCKLAKQPALS 167
            ++   WH R G+ S  KL     +++ S    +NNL  ++  +   CLN K A+ P   
Sbjct: 417 KNNFRLWHERFGHISDGKLLEIKRKNMFSDQSLLNNL-ELSCEICEPCLNGKQARLPFKQ 476

Query: 168 FSTSTFIYDKPFDLIHSDIWGSASTSTVHGYRYYVLFIDDFSRFTWVYFLKHRSELSRTY 227
               T I  +P  ++HSD+ G  +  T+    Y+V+F+D F+ +   Y +K++S++   +
Sbjct: 477 LKDKTHI-KRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKYKSDVFSMF 536

Query: 228 IEFANMIRTQFSYPIKTLRTDNALEYKNSTLISFLSQQCTLVQRSCPHTSQQNGRAKCKH 287
            +F       F+  +  L  DN  EY ++ +  F  ++      + PHT Q NG ++   
Sbjct: 537 QDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMI 596

Query: 288 RHILDS----VCALLLSASFW 296
           R I +     V    L  SFW
Sbjct: 597 RTITEKARTMVSGAKLDKSFW 610

[Close]

BLAST of MELO.jh101505.1 vs. ExPASy Swiss-Prot
Match: P92520 (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 GN=AtMg00820 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 1.4e-20
Identity = 47/98 (47.96%), Postives = 65/98 (66.33%), Query Frame = 0


Query: 364 PRRSTRASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIER 423
           P+    A  DP W +AM +EL AL +  TW  V  P  +  +GCKW++K K HSDGT++R
Sbjct: 28  PKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDR 87

Query: 424 YKTRLVAKGYSQEYGIDYEETFAPVARMTSVRNLLDVA 462
            K RLVAKG+ QE GI + ET++PV R  ++R +L+VA
Sbjct: 88  LKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125

[Close]

BLAST of MELO.jh101505.1 vs. ExPASy TrEMBL
Match: A0A5A7VIT8 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00050 PE=4 SV=1)

HSP 1 Score: 1053 bits (2722), Expect = 0.0
Identity = 561/778 (72.11%), Postives = 574/778 (73.78%), Query Frame = 0


Query: 1    MNTPSPIKSLPLIYAADSNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLGL 60
            MNTPSP KSLP IYAAD NCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLG 
Sbjct: 337  MNTPSPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLGF 396

Query: 61   TVSFSPNGCQVQDPQTGQTIGTGRKVGRLFELLSLQVPHPSISAPVTDSDTYQWHLRLGY 120
            TVSFS NGCQVQDPQTGQTIGTGRKVGRLFELLSLQVP PSISAPVTDSDTYQWHLRLG+
Sbjct: 397  TVSFSSNGCQVQDPQTGQTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGH 456

Query: 121  ASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTFIYDKPFDLIHSDIWGS 180
            ASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTST I DKPFDLIHSDIWG 
Sbjct: 457  ASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTSICDKPFDLIHSDIWGP 516

Query: 181  ASTSTVHGYRYYVLFIDDFSRFTWVYFLKHRSELSRTYIEFANMIRTQFSYPIKTLRTDN 240
            A TSTVHGYRYYVLFIDDFSRFTW+YFLKHRSELSRTYIEFANMIRTQFS PIKTLRTDN
Sbjct: 517  APTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDN 576

Query: 241  ALEYKNSTLISFLSQQCTLVQRSCPHTSQQNGRAKCKHRHILDSVCALLLSAS------- 300
            ALEYK+STL+SFLSQQ TLVQRSCPHTSQQNGRA+ KHRHILDSV ALLLSAS       
Sbjct: 577  ALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWG 636

Query: 301  ------------------------------------------------------------ 360
                                                                        
Sbjct: 637  EAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRA 696

Query: 361  --------------------------------FWEHTMFSRLSSFHAFLSSPQSFFTDTF 420
                                            FWEHTMFSRLSSFHA  SSPQSFFTDT 
Sbjct: 697  RLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTS 756

Query: 421  IDLFPLSESTPDNEFAQSAPTSATSDQLSISDGCPEPPPDTPPRRSTR------------ 480
            IDLFPLSESTP NE AQSAPTSATSDQ SISDG P+PPPD PPRRSTR            
Sbjct: 757  IDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPRRSTRVREPPIHLQDYH 816

Query: 481  ----------------ASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKI 540
                            ASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKI
Sbjct: 817  CFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKI 876

Query: 541  KTHSDGTIERYKTRLVAKGYSQEYGIDYEETFAPVARMTSVRNLLDVAAAKQWPLLQMNV 600
            KTHSDGTIERYK RLVAKGYSQEYGIDYEETFAPVARMTSVR+LL VAAAKQWPLLQM+V
Sbjct: 877  KTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDV 936

Query: 601  KNAFLNGTLSEEVYMKPPPGTSSPPHK--------------------------------- 604
            KNAFLNGTLSEEVYMKPPPGTSSPPHK                                 
Sbjct: 937  KNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTS 996

[Close]

BLAST of MELO.jh101505.1 vs. ExPASy TrEMBL
Match: A0A5D3D7V8 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G00480 PE=4 SV=1)

HSP 1 Score: 1053 bits (2722), Expect = 0.0
Identity = 561/778 (72.11%), Postives = 574/778 (73.78%), Query Frame = 0


Query: 1    MNTPSPIKSLPLIYAADSNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLGL 60
            MNTPSP KSLP IYAAD NCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLG 
Sbjct: 337  MNTPSPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLGF 396

Query: 61   TVSFSPNGCQVQDPQTGQTIGTGRKVGRLFELLSLQVPHPSISAPVTDSDTYQWHLRLGY 120
            TVSFS NGCQVQDPQTGQTIGTGRKVGRLFELLSLQVP PSISAPVTDSDTYQWHLRLG+
Sbjct: 397  TVSFSSNGCQVQDPQTGQTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGH 456

Query: 121  ASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTFIYDKPFDLIHSDIWGS 180
            ASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTST I DKPFDLIHSDIWG 
Sbjct: 457  ASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTSICDKPFDLIHSDIWGP 516

Query: 181  ASTSTVHGYRYYVLFIDDFSRFTWVYFLKHRSELSRTYIEFANMIRTQFSYPIKTLRTDN 240
            A TSTVHGYRYYVLFIDDFSRFTW+YFLKHRSELSRTYIEFANMIRTQFS PIKTLRTDN
Sbjct: 517  APTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDN 576

Query: 241  ALEYKNSTLISFLSQQCTLVQRSCPHTSQQNGRAKCKHRHILDSVCALLLSAS------- 300
            ALEYK+STL+SFLSQQ TLVQRSCPHTSQQNGRA+ KHRHILDSV ALLLSAS       
Sbjct: 577  ALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWG 636

Query: 301  ------------------------------------------------------------ 360
                                                                        
Sbjct: 637  EAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRA 696

Query: 361  --------------------------------FWEHTMFSRLSSFHAFLSSPQSFFTDTF 420
                                            FWEHTMFSRLSSFHA  SSPQSFFTDT 
Sbjct: 697  RLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTS 756

Query: 421  IDLFPLSESTPDNEFAQSAPTSATSDQLSISDGCPEPPPDTPPRRSTR------------ 480
            IDLFPLSESTP NE AQSAPTSATSDQ SISDG P+PPPD PPRRSTR            
Sbjct: 757  IDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPRRSTRVREPPIHLQDYH 816

Query: 481  ----------------ASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKI 540
                            ASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKI
Sbjct: 817  CFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKI 876

Query: 541  KTHSDGTIERYKTRLVAKGYSQEYGIDYEETFAPVARMTSVRNLLDVAAAKQWPLLQMNV 600
            KTHSDGTIERYK RLVAKGYSQEYGIDYEETFAPVARMTSVR+LL VAAAKQWPLLQM+V
Sbjct: 877  KTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDV 936

Query: 601  KNAFLNGTLSEEVYMKPPPGTSSPPHK--------------------------------- 604
            KNAFLNGTLSEEVYMKPPPGTSSPPHK                                 
Sbjct: 937  KNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTS 996

[Close]

BLAST of MELO.jh101505.1 vs. ExPASy TrEMBL
Match: A0A5D3C0D7 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold68G00020 PE=4 SV=1)

HSP 1 Score: 1053 bits (2722), Expect = 0.0
Identity = 561/778 (72.11%), Postives = 574/778 (73.78%), Query Frame = 0


Query: 1    MNTPSPIKSLPLIYAADSNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLGL 60
            MNTPSP KSLP IYAAD NCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLG 
Sbjct: 337  MNTPSPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLGF 396

Query: 61   TVSFSPNGCQVQDPQTGQTIGTGRKVGRLFELLSLQVPHPSISAPVTDSDTYQWHLRLGY 120
            TVSFS NGCQVQDPQTGQTIGTGRKVGRLFELLSLQVP PSISAPVTDSDTYQWHLRLG+
Sbjct: 397  TVSFSSNGCQVQDPQTGQTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGH 456

Query: 121  ASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTFIYDKPFDLIHSDIWGS 180
            ASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTST I DKPFDLIHSDIWG 
Sbjct: 457  ASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTSICDKPFDLIHSDIWGP 516

Query: 181  ASTSTVHGYRYYVLFIDDFSRFTWVYFLKHRSELSRTYIEFANMIRTQFSYPIKTLRTDN 240
            A TSTVHGYRYYVLFIDDFSRFTW+YFLKHRSELSRTYIEFANMIRTQFS PIKTLRTDN
Sbjct: 517  APTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDN 576

Query: 241  ALEYKNSTLISFLSQQCTLVQRSCPHTSQQNGRAKCKHRHILDSVCALLLSAS------- 300
            ALEYK+STL+SFLSQQ TLVQRSCPHTSQQNGRA+ KHRHILDSV ALLLSAS       
Sbjct: 577  ALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWG 636

Query: 301  ------------------------------------------------------------ 360
                                                                        
Sbjct: 637  EAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRA 696

Query: 361  --------------------------------FWEHTMFSRLSSFHAFLSSPQSFFTDTF 420
                                            FWEHTMFSRLSSFHA  SSPQSFFTDT 
Sbjct: 697  RLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTS 756

Query: 421  IDLFPLSESTPDNEFAQSAPTSATSDQLSISDGCPEPPPDTPPRRSTR------------ 480
            IDLFPLSESTP NE AQSAPTSATSDQ SISDG P+PPPD PPRRSTR            
Sbjct: 757  IDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPRRSTRVREPPIHLQDYH 816

Query: 481  ----------------ASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKI 540
                            ASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKI
Sbjct: 817  CFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKI 876

Query: 541  KTHSDGTIERYKTRLVAKGYSQEYGIDYEETFAPVARMTSVRNLLDVAAAKQWPLLQMNV 600
            KTHSDGTIERYK RLVAKGYSQEYGIDYEETFAPVARMTSVR+LL VAAAKQWPLLQM+V
Sbjct: 877  KTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDV 936

Query: 601  KNAFLNGTLSEEVYMKPPPGTSSPPHK--------------------------------- 604
            KNAFLNGTLSEEVYMKPPPGTSSPPHK                                 
Sbjct: 937  KNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTS 996

[Close]

BLAST of MELO.jh101505.1 vs. ExPASy TrEMBL
Match: A0A5A7T8F2 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold141G00410 PE=4 SV=1)

HSP 1 Score: 1051 bits (2719), Expect = 0.0
Identity = 560/778 (71.98%), Postives = 574/778 (73.78%), Query Frame = 0


Query: 1    MNTPSPIKSLPLIYAADSNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLGL 60
            MNTPSP KSLP IYAAD NCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLG 
Sbjct: 337  MNTPSPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLGF 396

Query: 61   TVSFSPNGCQVQDPQTGQTIGTGRKVGRLFELLSLQVPHPSISAPVTDSDTYQWHLRLGY 120
            TVSFS NGCQVQDPQTGQTIGTGRKVGRLFE+LSLQVP PSISAPVTDSDTYQWHLRLG+
Sbjct: 397  TVSFSSNGCQVQDPQTGQTIGTGRKVGRLFEVLSLQVPSPSISAPVTDSDTYQWHLRLGH 456

Query: 121  ASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTFIYDKPFDLIHSDIWGS 180
            ASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTST I DKPFDLIHSDIWG 
Sbjct: 457  ASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTSICDKPFDLIHSDIWGP 516

Query: 181  ASTSTVHGYRYYVLFIDDFSRFTWVYFLKHRSELSRTYIEFANMIRTQFSYPIKTLRTDN 240
            A TSTVHGYRYYVLFIDDFSRFTW+YFLKHRSELSRTYIEFANMIRTQFS PIKTLRTDN
Sbjct: 517  APTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDN 576

Query: 241  ALEYKNSTLISFLSQQCTLVQRSCPHTSQQNGRAKCKHRHILDSVCALLLSAS------- 300
            ALEYK+STL+SFLSQQ TLVQRSCPHTSQQNGRA+ KHRHILDSV ALLLSAS       
Sbjct: 577  ALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWG 636

Query: 301  ------------------------------------------------------------ 360
                                                                        
Sbjct: 637  EAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRA 696

Query: 361  --------------------------------FWEHTMFSRLSSFHAFLSSPQSFFTDTF 420
                                            FWEHTMFSRLSSFHA  SSPQSFFTDT 
Sbjct: 697  RLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTS 756

Query: 421  IDLFPLSESTPDNEFAQSAPTSATSDQLSISDGCPEPPPDTPPRRSTR------------ 480
            IDLFPLSESTP NE AQSAPTSATSDQ SISDG P+PPPD PPRRSTR            
Sbjct: 757  IDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPRRSTRVREPPIHLQDYH 816

Query: 481  ----------------ASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKI 540
                            ASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKI
Sbjct: 817  CFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKI 876

Query: 541  KTHSDGTIERYKTRLVAKGYSQEYGIDYEETFAPVARMTSVRNLLDVAAAKQWPLLQMNV 600
            KTHSDGTIERYK RLVAKGYSQEYGIDYEETFAPVARMTSVR+LL VAAAKQWPLLQM+V
Sbjct: 877  KTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDV 936

Query: 601  KNAFLNGTLSEEVYMKPPPGTSSPPHK--------------------------------- 604
            KNAFLNGTLSEEVYMKPPPGTSSPPHK                                 
Sbjct: 937  KNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTS 996

[Close]

BLAST of MELO.jh101505.1 vs. ExPASy TrEMBL
Match: A0A5D3DT06 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00190 PE=4 SV=1)

HSP 1 Score: 1051 bits (2718), Expect = 0.0
Identity = 560/778 (71.98%), Postives = 573/778 (73.65%), Query Frame = 0


Query: 1    MNTPSPIKSLPLIYAADSNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLGL 60
            MNTPSP KSLP IYAAD NCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLG 
Sbjct: 337  MNTPSPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVGQLCDLGF 396

Query: 61   TVSFSPNGCQVQDPQTGQTIGTGRKVGRLFELLSLQVPHPSISAPVTDSDTYQWHLRLGY 120
            TVSFS NGCQVQDPQTGQTIGTGRKVGRLFELLSLQVP PSISAPVTDSDTYQWHLRLG+
Sbjct: 397  TVSFSSNGCQVQDPQTGQTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGH 456

Query: 121  ASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTFIYDKPFDLIHSDIWGS 180
            ASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTST I DKPFDLIHSDIWG 
Sbjct: 457  ASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTSICDKPFDLIHSDIWGP 516

Query: 181  ASTSTVHGYRYYVLFIDDFSRFTWVYFLKHRSELSRTYIEFANMIRTQFSYPIKTLRTDN 240
            A TSTVHGYRYYVLFIDDFSRFTW+YFLKHRSELSRTYIEFANMIRTQFS PIKTLRTDN
Sbjct: 517  APTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDN 576

Query: 241  ALEYKNSTLISFLSQQCTLVQRSCPHTSQQNGRAKCKHRHILDSVCALLLSAS------- 300
            ALEYK+STL+SFLSQQ TLVQRSCPHTSQQNGRA+ KHRHILDSV ALLLSAS       
Sbjct: 577  ALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWG 636

Query: 301  ------------------------------------------------------------ 360
                                                                        
Sbjct: 637  EAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRA 696

Query: 361  --------------------------------FWEHTMFSRLSSFHAFLSSPQSFFTDTF 420
                                            FWEHTMFSRLSSFHA  SSPQSFFTDT 
Sbjct: 697  RLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTS 756

Query: 421  IDLFPLSESTPDNEFAQSAPTSATSDQLSISDGCPEPPPDTPPRRSTR------------ 480
            IDLFPLSESTP NE AQSAPTSATSDQ SISDG P+PPPD PPRRSTR            
Sbjct: 757  IDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPRRSTRVREPPIHLQDYH 816

Query: 481  ----------------ASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKI 540
                            ASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKI
Sbjct: 817  CFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKI 876

Query: 541  KTHSDGTIERYKTRLVAKGYSQEYGIDYEETFAPVARMTSVRNLLDVAAAKQWPLLQMNV 600
            KTHSDGTIERYK RLVAKGYSQEYGIDYEETFAPVARMTSVR+LL VAAAKQWPLLQM+V
Sbjct: 877  KTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDV 936

Query: 601  KNAFLNGTLSEEVYMKPPPGTSSPPHK--------------------------------- 604
            KNAFLNGTLSEEVYMKPPPGTSSPPHK                                 
Sbjct: 937  KNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTS 996

[Close]

BLAST of MELO.jh101505.1 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 212.2 bits (539), Expect = 1.1e-54
Identity = 113/283 (39.93%), Postives = 162/283 (57.24%), Query Frame = 0


Query: 375 LWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKTRLVAKGYS 434
           +W  AM+DE+ A+E  HTW+   LPP K+PIGCKW+YKIK +SDGTIERYK RLVAKGY+
Sbjct: 97  VWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYT 156

Query: 435 QEYGIDYEETFAPVARMTSVRNLLDVAAAKQWPLLQMNVKNAFLNGTLSEEVYMKPPP-- 494
           Q+ GID+ ETF+PV ++TSV+ +L ++A   + L Q+++ NAFLNG L EE+YMK PP  
Sbjct: 157 QQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGY 216

Query: 495 ----GTSSPPH------KGI---------------------------------------- 554
               G S PP+      K I                                        
Sbjct: 217 AARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATL 276

Query: 555 -VLLLLYVDDMIMTSNDPQAISDLQHYLGQHFEMKELGSLNYFLGLEVSQRSDGYLLSQA 605
            + +L+YVDD+I+ SN+  A+ +L+  L   F++++LG L YFLGLE+++ + G  + Q 
Sbjct: 277 FLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQR 336

[Close]

BLAST of MELO.jh101505.1 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 102.8 bits (255), Expect = 9.7e-22
Identity = 47/98 (47.96%), Postives = 65/98 (66.33%), Query Frame = 0


Query: 364 PRRSTRASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIER 423
           P+    A  DP W +AM +EL AL +  TW  V  P  +  +GCKW++K K HSDGT++R
Sbjct: 28  PKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDR 87

Query: 424 YKTRLVAKGYSQEYGIDYEETFAPVARMTSVRNLLDVA 462
            K RLVAKG+ QE GI + ET++PV R  ++R +L+VA
Sbjct: 88  LKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125

[Close]

BLAST of MELO.jh101505.1 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 65.5 bits (158), Expect = 1.7e-10
Identity = 31/79 (39.24%), Postives = 47/79 (59.49%), Query Frame = 0


Query: 505 LLLYVDDMIMTSNDPQAISDLQHYLGQHFEMKELGSLNYFLGLEVSQRSDGYLLSQAKYV 564
           LLLYVDD+++T +    ++ L   L   F MK+LG ++YFLG+++     G  LSQ KY 
Sbjct: 3   LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62

Query: 565 SDLLARSEITDSNTVSTPL 584
             +L  + + D   +STPL
Sbjct: 63  EQILNNAGMLDCKPMSTPL 81

The following BLAST results are available for this feature:

BLAST of MELO.jh101505.1 vs. NCBI nr


Match Name	Identity	Description
TYK19656.1	72.11	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0041601.1	72.11	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
TYK04714.1	72.11	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0037745.1	71.98	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
TYK26360.1	71.98	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]

BLAST of MELO.jh101505.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	3.4e-72	26.91	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	1.3e-66	25.84	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P10978	4.3e-51	26.02	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	6.1e-37	32.32	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P92520	1.4e-20	47.96	Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of MELO.jh101505.1 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A5A7VIT8	72.11	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3D7V8	72.11	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3C0D7	72.11	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7T8F2	71.98	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3DT06	71.98	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]

BLAST of MELO.jh101505.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	1.1e-54	39.93	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00820.1	9.7e-22	47.96	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]
ATMG00810.1	1.7e-10	39.24	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 163..320 e-value: 1.6E-23 score: 85.1
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 91..154 e-value: 1.4E-7 score: 31.3
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 168..266 e-value: 2.4E-8 score: 34.2
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 165..340 score: 14.249363
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 503..583 e-value: 4.1E-19 score: 69.1 coord: 391..495 e-value: 7.1E-34 score: 117.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 332..352
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 332..374
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 504..595 coord: 375..493 coord: 41..282
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 164..297
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 391..563

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO.jh101505.1.t1	MELO.jh101505.1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding