MELO.jh101407.1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh101407.1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Gag protease polyprotein
Location	chr04: 4341232 .. 4345600 (+)
RNA-Seq Expression	MELO.jh101407.1
Synteny	MELO.jh101407.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGGTGATGAAATAAATATTCTGCATTTCAACAAGTCTAATCAATTAATATCAACATATTTAATGAACAGTAAACAAAAATTAATAACAACCAAATTAAACCCTAAATCTAAAAAATTTAAATCAAATGGCTTAAACCTAACAAATTTAGAGCACATTGTAATCAATTGGCCTAAATATGTTAAATTTGATGCAACAATAAAATCAATTGGCCTACACCAGTACAACAAACAAAATTTGATGCACAATAAAGTTAAAACACAGTAAAGTAAATGCAAAATTTGATGCAACAATACATTCAAATTAAAACATAAAGCAAAGGCATAATTTGATGTGACAGTATTCAATTGGCCTAAACCTAACAAAATTTACGTTCCGAAATTTTTTTTTAAGGTAAAATTTTTCTCGTTCTATTTAAAGTGCAAATTGATATAATAATGGTATAATATTGATGTTATTATTATTATTAATATTTATTTTAATTGTTATAATATTAACATTATAAATATTATTATAAATTAATATTATAGAAATAGTGATATTTCTAAAACAATAAAATAAATTATTATTTATTTAATATTAATATTATAAATATATTATTATTATTACTTTATTATTATTATTATTATTTATATTTTTATATATATATTATTATTTAATTTAAATTATTAATATTATATATTATTTAAGATTTATATATATATATATATATATATATATATATATATATATATATATATATATATATAATAAATTTTTTTAAAAAAAAATCAAAACCCTATCGCGCCGCTACCCCCTCGAAATTTCTTTTTCTCTCCCGCAGCCGCCGCATCTTCTTCTTCTTTTCCTTCACCGCCTTCAACACCTCACAGCCGCCGTCGCGCCTCTCTGCCACCATCCTCCTTCGTCTCCGTCTTTCCCTTCCTCTCCGTCTCCGTTTTTCTTTTCTCTCTTCTCCTTAGCCTCCGCCATCACCTATCCTCCCCGTCCTCACCTCGTACTACGGCGCCGGCAGAACACCGAGGGGATACCATCCATCTACAGCCGACGCTTCTCCAGCTTTCTCTCTTCGTTCTACCACCGCCGGCATCATCTCCGCCATCAGCTCGTGTGTCGTCCGCAAATCGCCGCCGCGTTCCGCCGCCGGGAGTGTGAAGATTAAATCGGCTCCAAGCCGGCTGTCCAAGCCGAGCCGAGATCGCGGTCCAAGCCGAGCCGAGATCGCTGCCAAGCCGAGCCGATTGGAGTTAGCTTCCTTTCCTTGGGTAAGTCAGCGGATAACCTTTTAAGACAACTGCTACTGAAATCATCAACTAAAACTTTCGTGTTTCGTTAGGTAGATCTGTCGAGCGTGGTTTTCGATCGAGGGGCATAACCGAGTTTCAGGTAAGGGTTTTCCTACTACTGGACCCCGAGTCCAGGCTAAAACCGTAGTAATCCACAGGGGATTACACGTTAGTGACTGTACTGAATACCTGTATGCGTGTTGACTGTTAAGTACTGATATTATATTTTGTCTGATGAAAATATACTGTGACTGCTATTTGTGGATTGAAATTATATGTTGACGGACCTTAAAGTTACGGTTTAGTATGTATTAAACACTGGTCTGAATGTGGTTCATGGAGTTTGGACGGGGAAGGGCAGTGAGTCCGGTTTTGGTTGGATAGTCGATTGGACCTAGGGTTTTCCCTATTGGGCGTGCAAATCGGTAATGCATAAAGCAACTGAGGGTGTAGATGTTTAAACCTATACTATCTGACTGACAAAGCCTATGGTGGGACTGTGATATGAATGTCGCCGGGATGTGGCTGATGTAGACAGTTTAGTTTGGACTGAGGGATAACGGTTAGCTTCATCTATGGGGTAGTGTGCCTTACGGATATGTGCATCCTTCGGGAGCACTAGACTGATATGTGTATCCTTCGGGAGCACTAGACTGATATGTGCATCCTTCGGGAGCACTAGACTGATATGTGTATCCTTCGGGAGCACTAGACTGATATGTGCATCCTTCGGGAGCACTAGACTGATATGTGTATCCTTCGGGAGCACTAGACTGATATGTGTGTTCTACGGAACCACTAGACTGTTATGTAGGGTACCCCCGAATAGGAAGTTAACTGTTGTTCCCTAATGGGCCCAGTAGTGGGTCCCTTACTGGGTATGTTTATACTCACCCTTTTCCTTCTTCAACTTTTCAGGTAGGGGTGCAGCGAGGGGCAGACCGACGAGAGGCAGGAAGGATGCGTGAAGGCCATATGGACGCGTCTGATTTCTTTCGCTTCCGCTATGTATTTTGTCAGAATATTTTGACTGTGATTTTGGACTGGTGACTTGACATTTTATTTTGTGACTTTTTGAATTATTAAAAAATAGGGCCCGAAACTGTCTTTTGTAAGGTTTATAATGTTTTAATGAATCGTATCTGGTCCGTTTTAAATTTTTCTGTTGAATGGTCGAGTTTTGGTTTTTGGTAGTGACCTCAGCTTAGTCCGGAAAAGTTGGGTCGTTACAGTTGGTATCAGAGCCGAAGTTTTAGGTTCTGTAGACTGACTTATAATGTGAGTCTGTGTTTTGTGTCCTTATGGCTGAAACGATCCTTGCCGCTCGTCAGGTACGCTCTCATGAAAGTATATGTATAACTCTACATGCTTTACCTTACCTAAGTTAAACTGCAAATTCAATTACCAATTTATGACTAAAGGAATCGTTGGTGGTTGTTAGGGAGATGCCACCAAGGAGAGGTGCACGTAGGGGTGGCCGAGGAGGCCGAGGAAGGGGAGCAGGACGCGGTCAGCCTGAGGTGCAGCCTGTAGCCCAAGCCCCTGACCCGGCTGCGCCAGTTACTCATGCGGACCTAGCCGCCATGGAGCAGAGGTTTAGAGATATGATTATGCAGATGCGGGAGCAGCAGAAGCCTGCCTCGCCAACTCCGGCGCCAGCTCCAGCGCCAGCTCCAGCACCAGTTCCTGCTCCAGCTCCGGCTCCGGTACCCAGTTGCACCCCAGTTTGTGCCGGATCAGTTGTCGGCAGAGGCTAAGCACCTGAGGGATTTCAGGAAGTATAATCCCACGACGTTTGATGGGTCTTTGGAGGACCCCACCAGAGCTCAGATGTGGCTATCGTCCTTGGAGACCATATTCCGTTACATGAAATGCCCTGAGGATCAGAAAGTTCAGTGTGCTGTTTTTATGTTGACTGACAGAGGTACTGCATGGTGGGAGACTACAGAGAGGATGCTAGGTGGTGATGTGAGTCAGATCACGTGGCAGCAGTTCAAGGAGAGCTTCTATGCGAAATTCTTCTCTGCCAGTTTGAGAGATGCCAAGCGGCAGGAGTTTCTGAACTTAGAGCAGGGTGACATGACAGTGGAGCAGTATGATGCGGAGTTTGACATGTTATCCCGCTTCGCTCCCGAGATGATAGCGACCGAGGCGGCCAGAGCTGATAAGTTTGTTAGAGGCCTCAGACTGGACATTCAGGGTTTGGTCCGAGCTTTCAGACCCGCTACTCATGCCGATGCACTGCGCCTGGCAGTGGATCTCAGTTTACAGGAGAGGGCCAACTCGTCTAAGACCGCTGGTAGAGGTTCGACGTCGGGACAGAAGAGGAAGGCTGAGCAGCAGCCTGTTCCAGTGCCACAGCGGAATTTCAGACCAGGTGGTGAGTTTCGCAGCTTCCAGCAGAAACCTTTTGAGGCAGGGGAGGCTGCCAGAGGAAAGCCGTTGTGTACCACTTGTGGGAAGCACCATCTGGGCCGTTGCTTATTCGGGACCAGGACCTGCTTTAAGTGCAGGCAAGAGGGTCATACAGCTGATAGATGCCCGTTGAGACTCACGGGGATCGCGCAGAATCAGGGAGCAGGTGCTCCACATCAGGGTAGAGTCTTTGCTACCAACAGGACTGAGGCAGAGAAGGCGGGCACAGTAGTGACAGGTACGCTCCCAGTGTTGGGGCATTACGCCTTAGTTTTGTTTGATTCGGGTTCGTCACATTCTTTTATCTCTTCCGCATTTGTGTCGCATGCCCGCTTAGAGGTAGAGCCCTTACACCATGTTCTGTCAGTATCTACTCCTTCCGGGGAATGTATGTTGTCGAAGGAAAAGGTGAAGGCATGTCAGATTGAGATAGCAGGCCATGTGATTGAGGTAACGCTGATAGTTCTGGATATGCTGGACTTTGATGTAATCCTGGGTATGGATTGGCTGGCCGCTAACCACGCCAGCATAGATTGTTCACGTAAGGAGGTAACGTTTAACCCTCCCTCGTTGGCCAGTTTTAAATTTAAGGGAGGAGGGTCAAAGTCGTTGCCTCAGGTAATCTCAGCCATCCCAACGGCTGCCGGTGTACTTGGGGTATCTTAG

mRNA sequence

ATGCAGCCTCCGCCATCACCTATCCTCCCCGTCCTCACCTCGTACTACGGCGCCGGCAGAACACCGAGGGGATACCATCCATCTACAGCCGACGCTTCTCCAGCTTTCTCTCTTCGTTCTACCACCGCCGGCATCATCTCCGCCATCAGCTCGTGTGTCGTCCGCAAATCGCCGCCGCGTTCCGCCGCCGGGAGTGTGAAGATTAAATCGGCTCCAAGCCGGCTGTCCAAGCCGAGCCGAGATCGCGGTCCAAGCCGAGCCGAGATCGCTGCCAAGCCGAGCCGATTGGAGTTAGCTTCCTTTCCTTGGGTAGGGGTGCAGCGAGGGGCAGACCGACGAGAGGCAGGAAGGATGCGTGAAGGCCATATGGACGCGTCTGATTTCTTTCGCTTCCGCTATGTATTTTGTCAGAATATTTTGACTGTGATTTTGGACTGGGAGATGCCACCAAGGAGAGGTGCACGTAGGGGTGGCCGAGGAGGCCGAGGAAGGGGAGCAGGACGCGGTCAGCCTGAGGTGCAGCCTGTAGCCCAAGCCCCTGACCCGGCTGCGCCAGTTACTCATGCGGACCTAGCCGCCATGGAGCAGAGGTTTAGAGATATGATTATGCAGATGCGGGAGCAGCAGAAGCCTGCCTCGCCAACTCCGGCGCCAGCTCCAGCGCCAGCTCCAGCACCAGTTCCTGCTCCAGCTCCGGCTCCGTATAATCCCACGACGTTTGATGGGTCTTTGGAGGACCCCACCAGAGCTCAGATGTGGCTATCGTCCTTGGAGACCATATTCCGTTACATGAAATGCCCTGAGGATCAGAAAGTTCAGTGTGCTGTTTTTATGTTGACTGACAGAGGTACTGCATGGTGGGAGACTACAGAGAGGATGCTAGGTGGTGATGTGAGTCAGATCACGTGGCAGCAGTTCAAGGAGAGCTTCTATGCGAAATTCTTCTCTGCCAGTTTGAGAGATGCCAAGCGGCAGGAGTTTCTGAACTTAGAGCAGGGTGACATGACAGTGGAGCAGTATGATGCGGAGTTTGACATGTTATCCCGCTTCGCTCCCGAGATGATAGCGACCGAGGCGGCCAGAGCTGATAAGTTTGTTAGAGGCCTCAGACTGGACATTCAGGGTTTGGTCCGAGCTTTCAGACCCGCTACTCATGCCGATGCACTGCGCCTGGCAGTGGATCTCAGTTTACAGGAGAGGGCCAACTCGTCTAAGACCGCTGGTAGAGGTTCGACGTCGGGACAGAAGAGGAAGGCTGAGCAGCAGCCTGTTCCAGTGCCACAGCGGAATTTCAGACCAGGTGGTGAGTTTCGCAGCTTCCAGCAGAAACCTTTTGAGGCAGGGGAGGCTGCCAGAGGAAAGCCGTTGTGTACCACTTGTGGGAAGCACCATCTGGGCCGTTGCTTATTCGGGACCAGGACCTGCTTTAAGTGCAGGCAAGAGGGTCATACAGCTGATAGATGCCCGTTGAGACTCACGGGGATCGCGCAGAATCAGGGAGCAGGTGCTCCACATCAGGGTAGAGTCTTTGCTACCAACAGGACTGAGGCAGAGAAGGCGGGCACAGTAGTGACAGGTACGCTCCCAGTGTTGGGGCATTACGCCTTAGTTTTGTTTGATTCGGGTTCGTCACATTCTTTTATCTCTTCCGCATTTGTGTCGCATGCCCGCTTAGAGGTAGAGCCCTTACACCATGTTCTGTCAGTATCTACTCCTTCCGGGGAATGTATGTTGTCGAAGGAAAAGGTGAAGGCATGTCAGATTGAGATAGCAGGCCATGTGATTGAGGTAACGCTGATAGTTCTGGATATGCTGGACTTTGATGTAATCCTGGGTATGGATTGGCTGGCCGCTAACCACGCCAGCATAGATTGTTCACGTAAGGAGGTAACGTTTAACCCTCCCTCGTTGGCCAGTTTTAAATTTAAGGGAGGAGGGTCAAAGTCGTTGCCTCAGGTAATCTCAGCCATCCCAACGGCTGCCGGTGTACTTGGGGTATCTTAG

Coding sequence (CDS)

ATGCAGCCTCCGCCATCACCTATCCTCCCCGTCCTCACCTCGTACTACGGCGCCGGCAGAACACCGAGGGGATACCATCCATCTACAGCCGACGCTTCTCCAGCTTTCTCTCTTCGTTCTACCACCGCCGGCATCATCTCCGCCATCAGCTCGTGTGTCGTCCGCAAATCGCCGCCGCGTTCCGCCGCCGGGAGTGTGAAGATTAAATCGGCTCCAAGCCGGCTGTCCAAGCCGAGCCGAGATCGCGGTCCAAGCCGAGCCGAGATCGCTGCCAAGCCGAGCCGATTGGAGTTAGCTTCCTTTCCTTGGGTAGGGGTGCAGCGAGGGGCAGACCGACGAGAGGCAGGAAGGATGCGTGAAGGCCATATGGACGCGTCTGATTTCTTTCGCTTCCGCTATGTATTTTGTCAGAATATTTTGACTGTGATTTTGGACTGGGAGATGCCACCAAGGAGAGGTGCACGTAGGGGTGGCCGAGGAGGCCGAGGAAGGGGAGCAGGACGCGGTCAGCCTGAGGTGCAGCCTGTAGCCCAAGCCCCTGACCCGGCTGCGCCAGTTACTCATGCGGACCTAGCCGCCATGGAGCAGAGGTTTAGAGATATGATTATGCAGATGCGGGAGCAGCAGAAGCCTGCCTCGCCAACTCCGGCGCCAGCTCCAGCGCCAGCTCCAGCACCAGTTCCTGCTCCAGCTCCGGCTCCGTATAATCCCACGACGTTTGATGGGTCTTTGGAGGACCCCACCAGAGCTCAGATGTGGCTATCGTCCTTGGAGACCATATTCCGTTACATGAAATGCCCTGAGGATCAGAAAGTTCAGTGTGCTGTTTTTATGTTGACTGACAGAGGTACTGCATGGTGGGAGACTACAGAGAGGATGCTAGGTGGTGATGTGAGTCAGATCACGTGGCAGCAGTTCAAGGAGAGCTTCTATGCGAAATTCTTCTCTGCCAGTTTGAGAGATGCCAAGCGGCAGGAGTTTCTGAACTTAGAGCAGGGTGACATGACAGTGGAGCAGTATGATGCGGAGTTTGACATGTTATCCCGCTTCGCTCCCGAGATGATAGCGACCGAGGCGGCCAGAGCTGATAAGTTTGTTAGAGGCCTCAGACTGGACATTCAGGGTTTGGTCCGAGCTTTCAGACCCGCTACTCATGCCGATGCACTGCGCCTGGCAGTGGATCTCAGTTTACAGGAGAGGGCCAACTCGTCTAAGACCGCTGGTAGAGGTTCGACGTCGGGACAGAAGAGGAAGGCTGAGCAGCAGCCTGTTCCAGTGCCACAGCGGAATTTCAGACCAGGTGGTGAGTTTCGCAGCTTCCAGCAGAAACCTTTTGAGGCAGGGGAGGCTGCCAGAGGAAAGCCGTTGTGTACCACTTGTGGGAAGCACCATCTGGGCCGTTGCTTATTCGGGACCAGGACCTGCTTTAAGTGCAGGCAAGAGGGTCATACAGCTGATAGATGCCCGTTGAGACTCACGGGGATCGCGCAGAATCAGGGAGCAGGTGCTCCACATCAGGGTAGAGTCTTTGCTACCAACAGGACTGAGGCAGAGAAGGCGGGCACAGTAGTGACAGGTACGCTCCCAGTGTTGGGGCATTACGCCTTAGTTTTGTTTGATTCGGGTTCGTCACATTCTTTTATCTCTTCCGCATTTGTGTCGCATGCCCGCTTAGAGGTAGAGCCCTTACACCATGTTCTGTCAGTATCTACTCCTTCCGGGGAATGTATGTTGTCGAAGGAAAAGGTGAAGGCATGTCAGATTGAGATAGCAGGCCATGTGATTGAGGTAACGCTGATAGTTCTGGATATGCTGGACTTTGATGTAATCCTGGGTATGGATTGGCTGGCCGCTAACCACGCCAGCATAGATTGTTCACGTAAGGAGGTAACGTTTAACCCTCCCTCGTTGGCCAGTTTTAAATTTAAGGGAGGAGGGTCAAAGTCGTTGCCTCAGGTAATCTCAGCCATCCCAACGGCTGCCGGTGTACTTGGGGTATCTTAG

Protein sequence

MQPPPSPILPVLTSYYGAGRTPRGYHPSTADASPAFSLRSTTAGIISAISSCVVRKSPPRSAAGSVKIKSAPSRLSKPSRDRGPSRAEIAAKPSRLELASFPWVGVQRGADRREAGRMREGHMDASDFFRFRYVFCQNILTVILDWEMPPRRGARRGGRGGRGRGAGRGQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMREQQKPASPTPAPAPAPAPAPVPAPAPAPYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGSSHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPSLASFKFKGGGSKSLPQVISAIPTAAGVLGVS

Homology

[Close]

BLAST of MELO.jh101407.1 vs. NCBI nr
Match: TYK01613.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1030 bits (2662), Expect = 0.0
Identity = 535/593 (90.22%), Postives = 539/593 (90.89%), Query Frame = 0


Query: 89  IAAKPSRLELASFPWVGVQRGADRREAGRMREGHMDASDFFRFRYVFCQNILTVILDWEM 148
           +   P   E+ +   VGVQRGADRREAGRMREGHMDAS F                  EM
Sbjct: 181 VEPPPPAGEIWATYLVGVQRGADRREAGRMREGHMDASGFL------------FASAMEM 240

Query: 149 PPRRGARRGGRGGRGRGAGRGQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMREQ 208
           PPRRGARRGGRGGRGRGAGR QPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMREQ
Sbjct: 241 PPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMREQ 300

Query: 209 QKPASPTPAPAPAPAPAPVPAPAPAP------------------------YNPTTFDGSL 268
           QKPASPTPAPAPAPAPAPVPAPAPAP                        YNPTTFDGSL
Sbjct: 301 QKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGSL 360

Query: 269 EDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQ 328
           EDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQ
Sbjct: 361 EDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQ 420

Query: 329 QFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADK 388
           QFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADK
Sbjct: 421 QFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADK 480

Query: 389 FVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPV 448
           FVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPV
Sbjct: 481 FVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPV 540

Query: 449 PVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHT 508
           PVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHT
Sbjct: 541 PVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHT 600

Query: 509 ADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGSS 568
           ADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGSS
Sbjct: 601 ADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGSS 660

Query: 569 HSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLDM 628
           HSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLDM
Sbjct: 661 HSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLDM 720

Query: 629 LDFDVILGMDWLAANHASIDCSRKEVTFNPPSLASFKFKGGGSKSLPQVISAI 657
           LDFDVILGMDWLAANHASIDCSRKEVTFNPPS+ASFKFKGGGSKSLPQVISAI
Sbjct: 721 LDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAI 761

[Close]

BLAST of MELO.jh101407.1 vs. NCBI nr
Match: KAA0032617.1 (gag protease polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 1003 bits (2592), Expect = 0.0
Identity = 526/599 (87.81%), Postives = 531/599 (88.65%), Query Frame = 0


Query: 104 VGVQRGADRREAGRMREGHMDASDF------------FRFRYVFCQNILTVILDW----- 163
           VG QRGADRREAGRMR+GHMDAS F            FRF  +     L  +  W     
Sbjct: 56  VGAQRGADRREAGRMRKGHMDASGFLIVFAIWYQSLSFRFCRLAYNVSLCFVSLWLKRSL 115

Query: 164 ----EMPPRRGARRGGRGGRGRGAGRGQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMI 223
               EMPPRRGARRGGRGGRGRGAGR QPEVQPVAQAPDP APVTHADLAAMEQRFRD+I
Sbjct: 116 PLVREMPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPVAPVTHADLAAMEQRFRDLI 175

Query: 224 MQMREQQKPASPTPAPAPAPAPAPVPAPAPAP------------------------YNPT 283
           MQMREQQKPASPTPA APAPAPAPVPAPAPAP                        YNPT
Sbjct: 176 MQMREQQKPASPTPALAPAPAPAPVPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPT 235

Query: 284 TFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDV 343
           TFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDV
Sbjct: 236 TFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDV 295

Query: 344 SQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATE 403
           SQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVE YDAEFDMLSRFAPEMIATE
Sbjct: 296 SQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEHYDAEFDMLSRFAPEMIATE 355

Query: 404 AARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRK 463
           AARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRK
Sbjct: 356 AARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRK 415

Query: 464 AEQQPVPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKC 523
           AEQQPVPVPQRNFR GGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCL GTRTCFKC
Sbjct: 416 AEQQPVPVPQRNFRSGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLLGTRTCFKC 475

Query: 524 RQEGHTADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVL 583
           RQEGHTADRCPLRLTG AQNQGAGAPHQGRVFATNRTEAEKA TVVTGTLPVLGHYALVL
Sbjct: 476 RQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNRTEAEKASTVVTGTLPVLGHYALVL 535

Query: 584 FDSGSSHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVT 643
           FDSGSSHSFISSAFV HARLEVEPLHHVLSVSTPSGECMLSKEKVKACQI IAGHVIEVT
Sbjct: 536 FDSGSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIVIAGHVIEVT 595

Query: 644 LIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPSLASFKFKGGGSKSLPQVISAI 657
           LIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS+ASFKFKGGGSKSLPQVISAI
Sbjct: 596 LIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAI 654

[Close]

BLAST of MELO.jh101407.1 vs. NCBI nr
Match: KAA0043391.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1001 bits (2588), Expect = 0.0
Identity = 524/599 (87.48%), Postives = 531/599 (88.65%), Query Frame = 0


Query: 104 VGVQRGADRREAGRMREGHMDASDF------------FRFRYVFCQNILTVILDW----- 163
           V  QRGADRREAGR REGHMDAS F            FRF  +     L  +  W     
Sbjct: 235 VRAQRGADRREAGRTREGHMDASGFLIASAIWYKSLSFRFCRLAYNVSLCFVSLWLKRSL 294

Query: 164 ----EMPPRRGARRGGRGGRGRGAGRGQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMI 223
               EMPPRRGARRGGRGGRGRGAGR QPEVQPVAQAPDPAAPVTHADLAAMEQRFRD+I
Sbjct: 295 PLVREMPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLI 354

Query: 224 MQMREQQKPASPTPAPAPAPAPAPVPAPAPAP------------------------YNPT 283
           MQMREQQKPASPTPA APAPAPAP PAPAPAP                        YNPT
Sbjct: 355 MQMREQQKPASPTPASAPAPAPAPAPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPT 414

Query: 284 TFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDV 343
           TFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDV
Sbjct: 415 TFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDV 474

Query: 344 SQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATE 403
           SQITWQQFKESFYAKFFSASLRDAKRQEFLN+EQG+MTVEQYDAEFDMLSRFAPEMIATE
Sbjct: 475 SQITWQQFKESFYAKFFSASLRDAKRQEFLNIEQGEMTVEQYDAEFDMLSRFAPEMIATE 534

Query: 404 AARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRK 463
           AARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRG TSGQKRK
Sbjct: 535 AARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGLTSGQKRK 594

Query: 464 AEQQPVPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKC 523
           AEQQPVPVPQRNFR GGEFR FQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKC
Sbjct: 595 AEQQPVPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKC 654

Query: 524 RQEGHTADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVL 583
           RQEGHTADRCPLRLTG AQNQGAGAPHQGRVFATN+TEAEKAGTVVTGTLPVLGHYALVL
Sbjct: 655 RQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTGTLPVLGHYALVL 714

Query: 584 FDSGSSHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVT 643
           FDSGSSHSFISSAFV HARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVT
Sbjct: 715 FDSGSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVT 774

Query: 644 LIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPSLASFKFKGGGSKSLPQVISAI 657
           LIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS+ASFKFKGGGSKSLPQVISAI
Sbjct: 775 LIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAI 833

[Close]

BLAST of MELO.jh101407.1 vs. NCBI nr
Match: KAA0061618.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 998 bits (2579), Expect = 0.0
Identity = 518/588 (88.10%), Postives = 528/588 (89.80%), Query Frame = 0


Query: 104 VGVQRGADRREAGRMREGHMDASDFFRFRYVFCQNI-LTVILDW---------EMPPRRG 163
           VG QRG D+REAGRMREGHMDAS F     +   N+ L  +  W         EMPPRRG
Sbjct: 121 VGAQRGVDQREAGRMREGHMDASGFLIASAILTYNVSLCFVSLWLKRSLPLVREMPPRRG 180

Query: 164 ARRGGRGGRGRGAGRGQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMREQQKPAS 223
           ARRGGRGGRGR  GR QPEVQPVAQAPDPAAPVTHADLAAMEQRFR++IMQMREQQKPAS
Sbjct: 181 ARRGGRGGRGREVGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRELIMQMREQQKPAS 240

Query: 224 PTPAPAPAPAPAPVPAPAPAP------------------------YNPTTFDGSLEDPTR 283
           PTPAPAPAPAP P PAPAPAP                        YNPTTFDGSLEDPTR
Sbjct: 241 PTPAPAPAPAPVPAPAPAPAPVPVAPQFVPDQLSAEAKHLRDLRKYNPTTFDGSLEDPTR 300

Query: 284 AQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKES 343
           AQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGD+SQITWQQFKES
Sbjct: 301 AQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDMSQITWQQFKES 360

Query: 344 FYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGL 403
           FYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGL
Sbjct: 361 FYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGL 420

Query: 404 RLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVPQR 463
           RLDIQGLVRAFRPATHADAL LAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVPQR
Sbjct: 421 RLDIQGLVRAFRPATHADALCLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVPQR 480

Query: 464 NFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCP 523
           NFR GGEF  FQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCP
Sbjct: 481 NFRSGGEFCRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCP 540

Query: 524 LRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGSSHSFIS 583
           LRLTGIAQNQGAGAPHQGRVFATN+TEAEKA TVVTGTLPVLG+YALVLFDSGSSHSFIS
Sbjct: 541 LRLTGIAQNQGAGAPHQGRVFATNKTEAEKASTVVTGTLPVLGYYALVLFDSGSSHSFIS 600

Query: 584 SAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDV 643
           SAFV HARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDV
Sbjct: 601 SAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDV 660

Query: 644 ILGMDWLAANHASIDCSRKEVTFNPPSLASFKFKGGGSKSLPQVISAI 657
           ILGMDWLAANHASIDCSRKEVTFNPPS+ASFKFKGGGSKSLPQVISAI
Sbjct: 661 ILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAI 708

[Close]

BLAST of MELO.jh101407.1 vs. NCBI nr
Match: KAA0036671.1 (gag protease polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 994 bits (2570), Expect = 0.0
Identity = 522/599 (87.15%), Postives = 529/599 (88.31%), Query Frame = 0


Query: 104 VGVQRGADRREAGRMREGHMDASDFFRFRYVFCQNI------------LTVILDW----- 163
           VG QRGADRREAGRMREGHMDAS F     ++ QN+            L  +  W     
Sbjct: 166 VGAQRGADRREAGRMREGHMDASGFLIASAIWYQNLSFRFCRLAYNVSLCFVSLWLKRSL 225

Query: 164 ----EMPPRRGARRGGRGGRGRGAGRGQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMI 223
               EMPPRRGARRGGRGGRGRGAGR    VQPVAQAPDPAAPVTHADLAAMEQRFRD+I
Sbjct: 226 PLVREMPPRRGARRGGRGGRGRGAGR----VQPVAQAPDPAAPVTHADLAAMEQRFRDLI 285

Query: 224 MQMREQQKPASPTPAPAPAPAPAPVPAPAPAP------------------------YNPT 283
           MQMREQQKPASPTPAPAP PAPAPVPAPAPAP                        YNPT
Sbjct: 286 MQMREQQKPASPTPAPAPTPAPAPVPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPT 345

Query: 284 TFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDV 343
           TFDGSLEDPTRA+MWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTE MLGGDV
Sbjct: 346 TFDGSLEDPTRAKMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTEIMLGGDV 405

Query: 344 SQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATE 403
           SQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATE
Sbjct: 406 SQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATE 465

Query: 404 AARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRK 463
           AARADKFVRGLRLDIQGLVR FRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRK
Sbjct: 466 AARADKFVRGLRLDIQGLVRVFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRK 525

Query: 464 AEQQPVPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKC 523
           AEQQPVPVPQRNFR GGEFRSFQQKPFEAGEAARGK LCTTCGKHHLGRCL GTRTCFKC
Sbjct: 526 AEQQPVPVPQRNFRSGGEFRSFQQKPFEAGEAARGKSLCTTCGKHHLGRCLLGTRTCFKC 585

Query: 524 RQEGHTADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVL 583
           RQEGHTADRCPLRLTG AQNQGAGAPHQGRV ATNRTEAEKAGTVVTGTLPVLGHYALVL
Sbjct: 586 RQEGHTADRCPLRLTGNAQNQGAGAPHQGRVLATNRTEAEKAGTVVTGTLPVLGHYALVL 645

Query: 584 FDSGSSHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVT 643
           FDSGSSHSFISSAFV HARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVT
Sbjct: 646 FDSGSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVT 705

Query: 644 LIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPSLASFKFKGGGSKSLPQVISAI 657
           LIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS+ASFKFKGGGSKSLPQVISAI
Sbjct: 706 LIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAI 760

[Close]

BLAST of MELO.jh101407.1 vs. ExPASy TrEMBL
Match: A0A5D3BPI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G002120 PE=4 SV=1)

HSP 1 Score: 1030 bits (2662), Expect = 0.0
Identity = 535/593 (90.22%), Postives = 539/593 (90.89%), Query Frame = 0


Query: 89  IAAKPSRLELASFPWVGVQRGADRREAGRMREGHMDASDFFRFRYVFCQNILTVILDWEM 148
           +   P   E+ +   VGVQRGADRREAGRMREGHMDAS F                  EM
Sbjct: 181 VEPPPPAGEIWATYLVGVQRGADRREAGRMREGHMDASGFL------------FASAMEM 240

Query: 149 PPRRGARRGGRGGRGRGAGRGQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMREQ 208
           PPRRGARRGGRGGRGRGAGR QPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMREQ
Sbjct: 241 PPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMREQ 300

Query: 209 QKPASPTPAPAPAPAPAPVPAPAPAP------------------------YNPTTFDGSL 268
           QKPASPTPAPAPAPAPAPVPAPAPAP                        YNPTTFDGSL
Sbjct: 301 QKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGSL 360

Query: 269 EDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQ 328
           EDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQ
Sbjct: 361 EDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQ 420

Query: 329 QFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADK 388
           QFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADK
Sbjct: 421 QFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADK 480

Query: 389 FVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPV 448
           FVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPV
Sbjct: 481 FVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPV 540

Query: 449 PVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHT 508
           PVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHT
Sbjct: 541 PVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHT 600

Query: 509 ADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGSS 568
           ADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGSS
Sbjct: 601 ADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGSS 660

Query: 569 HSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLDM 628
           HSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLDM
Sbjct: 661 HSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLDM 720

Query: 629 LDFDVILGMDWLAANHASIDCSRKEVTFNPPSLASFKFKGGGSKSLPQVISAI 657
           LDFDVILGMDWLAANHASIDCSRKEVTFNPPS+ASFKFKGGGSKSLPQVISAI
Sbjct: 721 LDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAI 761

[Close]

BLAST of MELO.jh101407.1 vs. ExPASy TrEMBL
Match: A0A5A7STC8 (Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold184G00010 PE=4 SV=1)

HSP 1 Score: 1003 bits (2592), Expect = 0.0
Identity = 526/599 (87.81%), Postives = 531/599 (88.65%), Query Frame = 0


Query: 104 VGVQRGADRREAGRMREGHMDASDF------------FRFRYVFCQNILTVILDW----- 163
           VG QRGADRREAGRMR+GHMDAS F            FRF  +     L  +  W     
Sbjct: 56  VGAQRGADRREAGRMRKGHMDASGFLIVFAIWYQSLSFRFCRLAYNVSLCFVSLWLKRSL 115

Query: 164 ----EMPPRRGARRGGRGGRGRGAGRGQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMI 223
               EMPPRRGARRGGRGGRGRGAGR QPEVQPVAQAPDP APVTHADLAAMEQRFRD+I
Sbjct: 116 PLVREMPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPVAPVTHADLAAMEQRFRDLI 175

Query: 224 MQMREQQKPASPTPAPAPAPAPAPVPAPAPAP------------------------YNPT 283
           MQMREQQKPASPTPA APAPAPAPVPAPAPAP                        YNPT
Sbjct: 176 MQMREQQKPASPTPALAPAPAPAPVPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPT 235

Query: 284 TFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDV 343
           TFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDV
Sbjct: 236 TFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDV 295

Query: 344 SQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATE 403
           SQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVE YDAEFDMLSRFAPEMIATE
Sbjct: 296 SQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEHYDAEFDMLSRFAPEMIATE 355

Query: 404 AARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRK 463
           AARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRK
Sbjct: 356 AARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRK 415

Query: 464 AEQQPVPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKC 523
           AEQQPVPVPQRNFR GGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCL GTRTCFKC
Sbjct: 416 AEQQPVPVPQRNFRSGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLLGTRTCFKC 475

Query: 524 RQEGHTADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVL 583
           RQEGHTADRCPLRLTG AQNQGAGAPHQGRVFATNRTEAEKA TVVTGTLPVLGHYALVL
Sbjct: 476 RQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNRTEAEKASTVVTGTLPVLGHYALVL 535

Query: 584 FDSGSSHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVT 643
           FDSGSSHSFISSAFV HARLEVEPLHHVLSVSTPSGECMLSKEKVKACQI IAGHVIEVT
Sbjct: 536 FDSGSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIVIAGHVIEVT 595

Query: 644 LIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPSLASFKFKGGGSKSLPQVISAI 657
           LIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS+ASFKFKGGGSKSLPQVISAI
Sbjct: 596 LIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAI 654

[Close]

BLAST of MELO.jh101407.1 vs. ExPASy TrEMBL
Match: A0A5A7TP96 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold588G00630 PE=4 SV=1)

HSP 1 Score: 1001 bits (2588), Expect = 0.0
Identity = 524/599 (87.48%), Postives = 531/599 (88.65%), Query Frame = 0


Query: 104 VGVQRGADRREAGRMREGHMDASDF------------FRFRYVFCQNILTVILDW----- 163
           V  QRGADRREAGR REGHMDAS F            FRF  +     L  +  W     
Sbjct: 235 VRAQRGADRREAGRTREGHMDASGFLIASAIWYKSLSFRFCRLAYNVSLCFVSLWLKRSL 294

Query: 164 ----EMPPRRGARRGGRGGRGRGAGRGQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMI 223
               EMPPRRGARRGGRGGRGRGAGR QPEVQPVAQAPDPAAPVTHADLAAMEQRFRD+I
Sbjct: 295 PLVREMPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLI 354

Query: 224 MQMREQQKPASPTPAPAPAPAPAPVPAPAPAP------------------------YNPT 283
           MQMREQQKPASPTPA APAPAPAP PAPAPAP                        YNPT
Sbjct: 355 MQMREQQKPASPTPASAPAPAPAPAPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPT 414

Query: 284 TFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDV 343
           TFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDV
Sbjct: 415 TFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDV 474

Query: 344 SQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATE 403
           SQITWQQFKESFYAKFFSASLRDAKRQEFLN+EQG+MTVEQYDAEFDMLSRFAPEMIATE
Sbjct: 475 SQITWQQFKESFYAKFFSASLRDAKRQEFLNIEQGEMTVEQYDAEFDMLSRFAPEMIATE 534

Query: 404 AARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRK 463
           AARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRG TSGQKRK
Sbjct: 535 AARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGLTSGQKRK 594

Query: 464 AEQQPVPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKC 523
           AEQQPVPVPQRNFR GGEFR FQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKC
Sbjct: 595 AEQQPVPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKC 654

Query: 524 RQEGHTADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVL 583
           RQEGHTADRCPLRLTG AQNQGAGAPHQGRVFATN+TEAEKAGTVVTGTLPVLGHYALVL
Sbjct: 655 RQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTGTLPVLGHYALVL 714

Query: 584 FDSGSSHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVT 643
           FDSGSSHSFISSAFV HARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVT
Sbjct: 715 FDSGSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVT 774

Query: 644 LIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPSLASFKFKGGGSKSLPQVISAI 657
           LIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS+ASFKFKGGGSKSLPQVISAI
Sbjct: 775 LIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAI 833

[Close]

BLAST of MELO.jh101407.1 vs. ExPASy TrEMBL
Match: A0A5A7V223 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold3980G00010 PE=4 SV=1)

HSP 1 Score: 998 bits (2579), Expect = 0.0
Identity = 518/588 (88.10%), Postives = 528/588 (89.80%), Query Frame = 0


Query: 104 VGVQRGADRREAGRMREGHMDASDFFRFRYVFCQNI-LTVILDW---------EMPPRRG 163
           VG QRG D+REAGRMREGHMDAS F     +   N+ L  +  W         EMPPRRG
Sbjct: 121 VGAQRGVDQREAGRMREGHMDASGFLIASAILTYNVSLCFVSLWLKRSLPLVREMPPRRG 180

Query: 164 ARRGGRGGRGRGAGRGQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMREQQKPAS 223
           ARRGGRGGRGR  GR QPEVQPVAQAPDPAAPVTHADLAAMEQRFR++IMQMREQQKPAS
Sbjct: 181 ARRGGRGGRGREVGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRELIMQMREQQKPAS 240

Query: 224 PTPAPAPAPAPAPVPAPAPAP------------------------YNPTTFDGSLEDPTR 283
           PTPAPAPAPAP P PAPAPAP                        YNPTTFDGSLEDPTR
Sbjct: 241 PTPAPAPAPAPVPAPAPAPAPVPVAPQFVPDQLSAEAKHLRDLRKYNPTTFDGSLEDPTR 300

Query: 284 AQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKES 343
           AQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGD+SQITWQQFKES
Sbjct: 301 AQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDMSQITWQQFKES 360

Query: 344 FYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGL 403
           FYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGL
Sbjct: 361 FYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGL 420

Query: 404 RLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVPQR 463
           RLDIQGLVRAFRPATHADAL LAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVPQR
Sbjct: 421 RLDIQGLVRAFRPATHADALCLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVPQR 480

Query: 464 NFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCP 523
           NFR GGEF  FQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCP
Sbjct: 481 NFRSGGEFCRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCP 540

Query: 524 LRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGSSHSFIS 583
           LRLTGIAQNQGAGAPHQGRVFATN+TEAEKA TVVTGTLPVLG+YALVLFDSGSSHSFIS
Sbjct: 541 LRLTGIAQNQGAGAPHQGRVFATNKTEAEKASTVVTGTLPVLGYYALVLFDSGSSHSFIS 600

Query: 584 SAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDV 643
           SAFV HARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDV
Sbjct: 601 SAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDV 660

Query: 644 ILGMDWLAANHASIDCSRKEVTFNPPSLASFKFKGGGSKSLPQVISAI 657
           ILGMDWLAANHASIDCSRKEVTFNPPS+ASFKFKGGGSKSLPQVISAI
Sbjct: 661 ILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAI 708

[Close]

BLAST of MELO.jh101407.1 vs. ExPASy TrEMBL
Match: A0A5A7T538 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold510G00100 PE=4 SV=1)

HSP 1 Score: 994 bits (2570), Expect = 0.0
Identity = 522/599 (87.15%), Postives = 529/599 (88.31%), Query Frame = 0


Query: 104 VGVQRGADRREAGRMREGHMDASDFFRFRYVFCQNI------------LTVILDW----- 163
           VG QRGADRREAGRMREGHMDAS F     ++ QN+            L  +  W     
Sbjct: 166 VGAQRGADRREAGRMREGHMDASGFLIASAIWYQNLSFRFCRLAYNVSLCFVSLWLKRSL 225

Query: 164 ----EMPPRRGARRGGRGGRGRGAGRGQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMI 223
               EMPPRRGARRGGRGGRGRGAGR    VQPVAQAPDPAAPVTHADLAAMEQRFRD+I
Sbjct: 226 PLVREMPPRRGARRGGRGGRGRGAGR----VQPVAQAPDPAAPVTHADLAAMEQRFRDLI 285

Query: 224 MQMREQQKPASPTPAPAPAPAPAPVPAPAPAP------------------------YNPT 283
           MQMREQQKPASPTPAPAP PAPAPVPAPAPAP                        YNPT
Sbjct: 286 MQMREQQKPASPTPAPAPTPAPAPVPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPT 345

Query: 284 TFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDV 343
           TFDGSLEDPTRA+MWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTE MLGGDV
Sbjct: 346 TFDGSLEDPTRAKMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTEIMLGGDV 405

Query: 344 SQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATE 403
           SQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATE
Sbjct: 406 SQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATE 465

Query: 404 AARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRK 463
           AARADKFVRGLRLDIQGLVR FRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRK
Sbjct: 466 AARADKFVRGLRLDIQGLVRVFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRK 525

Query: 464 AEQQPVPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKC 523
           AEQQPVPVPQRNFR GGEFRSFQQKPFEAGEAARGK LCTTCGKHHLGRCL GTRTCFKC
Sbjct: 526 AEQQPVPVPQRNFRSGGEFRSFQQKPFEAGEAARGKSLCTTCGKHHLGRCLLGTRTCFKC 585

Query: 524 RQEGHTADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVL 583
           RQEGHTADRCPLRLTG AQNQGAGAPHQGRV ATNRTEAEKAGTVVTGTLPVLGHYALVL
Sbjct: 586 RQEGHTADRCPLRLTGNAQNQGAGAPHQGRVLATNRTEAEKAGTVVTGTLPVLGHYALVL 645

Query: 584 FDSGSSHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVT 643
           FDSGSSHSFISSAFV HARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVT
Sbjct: 646 FDSGSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVT 705

Query: 644 LIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPSLASFKFKGGGSKSLPQVISAI 657
           LIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS+ASFKFKGGGSKSLPQVISAI
Sbjct: 706 LIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAI 760

The following BLAST results are available for this feature:

BLAST of MELO.jh101407.1 vs. NCBI nr


Match Name	Identity	Description
TYK01613.1	90.22	pol protein [Cucumis melo var. makuwa]	[more]
KAA0032617.1	87.81	gag protease polyprotein [Cucumis melo var. makuwa]	[more]
KAA0043391.1	87.48	pol protein [Cucumis melo var. makuwa]	[more]
KAA0061618.1	88.10	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0036671.1	87.15	gag protease polyprotein [Cucumis melo var. makuwa]	[more]

BLAST of MELO.jh101407.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO.jh101407.1 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A5D3BPI1	90.22	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45...	[more]
A0A5A7STC8	87.81	Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A5A7TP96	87.48	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold58...	[more]
A0A5A7V223	88.10	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold39...	[more]
A0A5A7T538	87.15	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold51...	[more]

BLAST of MELO.jh101407.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 511..640 e-value: 1.9E-23 score: 84.6
IPR021109	Aspartic peptidase domain superfamily	SUPERFAMILY	50630	Acid proteases	coord: 528..624
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 274..370 e-value: 1.2E-15 score: 57.5
None	No IPR available	PFAM	PF08284	RVP_2	coord: 506..634 e-value: 2.3E-43 score: 147.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 150..183
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..90
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 402..419
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 206..245
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 402..438
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 213..235
None	No IPR available	PANTHER	PTHR34482:SF4	POLYMERASES SUPERFAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED	coord: 241..490
None	No IPR available	PANTHER	PTHR34482	DNA DAMAGE-INDUCIBLE PROTEIN 1-LIKE	coord: 241..490
None	No IPR available	CDD	cd00303	retropepsin_like	coord: 552..617 e-value: 9.2036E-13 score: 62.354
IPR001969	Aspartic peptidase, active site	PROSITE	PS00141	ASP_PROTEASE	coord: 537..548
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 475..489 score: 9.438442
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 471..495

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO.jh101407.1.t1	MELO.jh101407.1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding