MELO.jh101317.1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh101317.1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Cytochrome b
Location	chr03: 15382684 .. 15388114 (-)
RNA-Seq Expression	MELO.jh101317.1
Synteny	MELO.jh101317.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATTACACACCTCATGTGGATCTAGCTTTCAACAGCGTAGAACACATTATGAGAGATGTTTCAGGGAGCTGGTTGATCCGTTATATGCATGCTAATGGGGCAAGTATGTTTCTCATTGCGGTTCACCTTCATATTTTTCATGGTCTATATCATGCGAGTTATAGCAGTCCTAGGGAATTTGTTCGGTGTCTCGGAGTTCTCATCTTCCTATTCATGATTGTGACAGCTTTTACAGGATACGTACTACCTTGGGGTCAGATGAGCTTTTGGGGAGCAACTGTAATTACAAGCTTAGCTAGCGCCATACCCGTAGTAGGAGATACCATAGTGACTTGGCTTTGGGGTGGTTTCTCCGTGGACAATGCCACCTTAAATCGTTTTTTAGTCTGCATCATTTACAATTAAAATTTTAATTAACAAATACATCATATGCATAAATAATTAAAACACCCTACAATTGGGTGTTTTGGCTCCTAAGTTAAGCTAAAAAGTTTAATTATTAGATTAATAATTTTGTTTGTACATAAAAGCTCCCAAACCTCTCGAATCAACTAGAGAAACATCAAAATTTAGCTAAGCCGACACAAAAATAGGTTGGATAAACCCAAGACGTAACTATTGGGCTTGAACTAGCCCATCCCACTAAATCATACCACTGGGCATGGATCAATGGAGTGAATGGGCCGAATAGAAAATCGAGTCTGGCGTGTAGATGTAGAGCAGGTCGGACACTTGAACGGATGAGACGCATGGCAAGCTCACTAGCGTGTAGAGCTAAGCAGGTCAGGTTCCAGGTTAGAGCATACAGATCAGGTATCGTGTTGCATAGCAGGCACACGCTGGGGATAAGCGCGTAGCGAGCTTACGACTTTCAAGTCACGAACAAGGAGTGCAAATGGGTCAGTCTACGTTTCTAGGTTTGAGAGCTTCTCCTCGATTCTGGGCTTGAATTTTCTCAAAATTTCAGCTTTTCTCTCTTCTGGTCGAATCAAATACAACCTAATTTGGACTTTAAGGACTTTATAAAAAAATACAGACCCTCGAAAAATAATTACAGCCTTAAAACTCGAGCCAATTATAATAATTATTAAAAACTTAATTTAGGCAAGAAACATAATCTATCCATTTTAGTTCAAACCAAAATTTATCAAATAAATTGGACACCCACCATATGCAATTGAGTAATTATCATGCTCTGATACAACATTATGGAAAGCAGTAAATATGCGCAACAGGAAACATGATCAATTTTACCCTAATTACATTTAAACTATTTAAAAGTTAACATGCTATCACTATCATAATTAATTGAAATTAAGATTAAGAAAAAAACAATCTTTGAAATTAGGGTTAAGTGAATTAACATGCAAATATGGTCATTAAACCATTCAAGTGAAAGTTAAACTTTGACTTTTTCAAGTCAAATGTCAAAATTTTGACTTTTTACCATTTTGTTTGTCTAGACTAATTCAAGCCTTCCATGTATGAAATTAGATTCAATTTTCCCAAAATTAAATCATATTGGAATATAAAACAGATCAAAATTTGGCTTTTCAAAGTTAAAAGTCAATATTTTGACTTTTTTCAACTTCGACTATTTCTATCATATTTTAGCTTCGAAATATAAATTTGCATTTGTATTTTAAACATTTAAATCACATTTAAATATAAAACTCTATCTCAATCAGATAATCGACGGTTATATAACATATAATTGTCAGTTTCTCTCTCTTTACCTGATTCGAAAAATTCGAATTATTCCAACATATTGTGTTAAGTTAATTCCATATAAGATAGCTAGGGAACCTAATAAATCAAGCTCCAATCATCCAAGATTAACTGACTAAATTCTTTTATGTCAATCTAATCAACATTCGTTAACTAATGGGTCATTCCACTAAAGTCTCGTAGTTGCACTCCTCTCATTATAGATATAATTGTGTGGATCTAATATAACTGTGATTAGTAAATTAATCCTTTATAGGTTGTTCGTAACCTTGGTTGGGTCAAAATACCATTTTACCCTTGAGATTACATCTTGTTCTTTAAGTGCCACTGATCCACTATTGAACAATTTATTTAAGGTCCAACCTATAAATAGAATCCCTCTTAGGACAATGAGAGAGTGGGGCCTTGCTAGGTTGTTCGTAACCTCGACTCGGTCAAAATACCATTTTACCACAGAGACTACATCTTGCTTTTTAAGTGTCACTGATCCACTATTGAATAATTTTTTTGAGGTCTAACCTATAAATAGAATCCCTCTTGGGACAATTAGAGGGTGGGGCCTTTCCAGGTTGTTTATAACCTCAATTGGGTCAAAATACCATTTTACCGCCAAGACTGCATCTTGTTCCTTAAGTACCACTAATCCACTATTGTACAATATGTTTAAGATCCAACCTATAAATAGACTTCCTCTCGAGACAACGAGAGGGTTCGGCCTTCACAAGTTGTTTGTAACCTCGACTAGGTGAAAATACCATTTTACCCCTGAGACTACATTTTACTCCCTAAGTGTCACTAATCCACTATTAAACAATTTGTTTGAGATCCAACATATAAATAGAATCCCTCTCAAGTCAATGAGTGGGTGGAGCCTCTTGTTCAAGACTTGGGTTCAGTCCTTAAAAAAACAACCTATCTACTAACCATAAAGTGGGTAGAAGTGAATTCTGCCTTGTACCCTATGTCTCTAGCTATATATTCACCCTATCTTACCCCTAAAATGGAATGCTTATTGGGTCAACGCTGTTGAGCTGCCCTCACCCATGTAGATCTAAGAATAATTCTGTGTGAAAAGAAGTTCATAGTTAGCTTAAGATTAAGATTACCTAGGTCATCAATAATCGAAATATTCAGTTTTAAACAGTAAATGGTGTTATAACGTAAAAATGATTATTTCATAGTTACAGTCTTATGTAAACTCTTTACATAGGATGCCTCCATTGTTTATGATCACATTGTTTCACTAACTATAAAGCGGGTTAAATTCATAGTGTCCCAAAATAAGGCACCCAACCTTTTTCATACACTATAGACTGTTAAGGCTATATACTCAAACTTTATCCATGTTTATGTCTCTATATAAAGTTCAAGTATAAATTAGATAGCTTCGAGATCTTATTTTATTGGATTTAAGAATTTAGTATTCAATTTTCACAAATAAGTCCTCAACAACCACTTTATTAAATAGAATATAATTTTAAACTACAAACTACGAGTTCTAGAACAAGATTTCAACAATATTCACCTTGACCACTCTGTCTCAAAGGTGGATGGTTTCAATTGACATCACGTCACTTTTCGGGTCCAGAGCATGTGATCCGAGAAGGGGTGTGACAAAATCATGTGCTACGTAAGCGGGATTTCCCTATTCTTAGGGAGCTTGATGTAGAGGACTTCGTTGTTATTATTATTGTTCACCATTATCTCGGCTACTTGTCCCATCTGTATTCTTCTTCTATTTCGCCGAAAGGTTTGCTCTATCTCAGGGTCAAGTATGAACTTTGGTTGTTCAGTTTTACTCATAAACTTCATCACATGCTCTTCAACTTAAACATGCAATTCAGTTAAAATGGAACTTCTACATAAGATTAGTGTATAAATTAAATCCACAGTAAAATCTACTAATTCCCCAACAACAACGCCAATAACTTGGTTGTTCTCATTTTGCAAATACAATATCGATTCATGAATATGCCATGTTAGGCTCTAAGTATGCGACTCTAAAAGGTGACTAGTTTAGTCACATGCGATAAAAGAAACACAATCCTATGTACGCATTGTTAACTCCATTAATTCAGTGTTTGAGTATAAGTTCTCCTTTCTCTTCCCCAAGTGTAGGTGAAGAGAGAGGTTTCCTGGGTAAGCTAGTGTTGAACACGGGTAATTGACGATCCTAATGGGCTAATAATGCGTTTTAAACACATGCGGTGTCAATACAATATATTGATATGCAAAATATATTTTTATCCCAAGTATTTATACTACGTGGGAGGGAGCAGCAAGATGGAAATGGCAATGACATGACATGAAATGTAAACTTGGGTATTAGCGATGAGATTAAGGAATATTTAGCTAAGTGTAAAGCAAAGATAATATTTAACACGTCAAGGCAATACAAAACATTTATTAACTTTAGATTTAAGACGAGCAACCTCTCGAAGCTTTTGTCATACTTGCTCGCCATTCAGAATCCAAATAATTAAAGTTAAGAGAAGATTTGTATCTATTATTTTTTTAATGAATTATAAGCAACCTATCCTAAATTAAGGCGAGCAAGCTCTCGATGCTTTCATCGTACAAACTCGCATTTCTGATATATATACTAAGGATAAGTTCGCAATAGAACATTGGTACAACCTTTTCATCGTCTGTTTAGCTAAATCAGGGTCATCATGTGTCAAGTGACAACAGTTTGTAACGACCCAACTCCTTATACTGAATCGAAGTCATTACTAAATATAGAACAAGTGGTTTAAGTCATGAAATTTATTAAAGACGCATAAGGTTTAAGAAATTTTATTTATGAAAATTTAAACAAGATAGTTATGCAAAAAAAAAATGTAATGCATTCTAAAGTCCTACTCGGGCCCTGTCTACATAAAAAGACGATAAGTAATGAAAAGTACTCAAACTCAAATAAGAAAGTCTAAAATAAGGATAAGCGGAAGCAGTAGTCCCTATGGCCCTCCACGGTCACTTCGGGTCGCTCGCCAGCTTGCCCTTGCCCTTGCCACGTCCTCTACCTGAAAACATAAAATGAAGAGAGTGAGTATAAAATACTCAGTAAGGGACCCACTACTAGTCCCACTAGGTGCCTGTTAACTTCCTGTCAGAGTCCTGTAACTGGTACCCAATCTCTGGCACGTTCCCGAACACGTGCAACATGCGCTCCCGTAGGAACGTATCTCTGGTCTTCGGAGCCCCGGGGGACCCCTAGGACAGTCGGGATGTGAGGACCCCGTCGAGTCACTCGAGTCATATCTATATCCATGCTAGACTGGCGTCCCGTCGGACCACACAGTCCTCAATAGGTGGTGATCCCGAAGGACACCCATGCAGGTACGACTCTAACAGATTAAGCTAACAGGTACCCTAATTGCAGTATACATACACATGGCATCAGCATATAACATATCACATAAATCATCTCTGCCCTCTCCGTCTCGACATTCGTCGTATAGCTATAACAGCTCTCGCCACACATAACAGGCTATAGTATAACCATATCGTTATTTACATCATACTAACATTGATTTCAGGCATCGTACCATCTAGTCCTCAACATGCAAAATTGGTGTATACATCGTCTCATATTTCTAAGCATGGAGCTAGTAGTAGAATCTCTTACCTGGAGATTTACTTGACAAGTCCTAACCGCGAGGCAGTACGCTTTCCAAGCGACGAGGTCCTAACTGTGTAA

mRNA sequence

ATGCATTACACACCTCATGTGGATCTAGCTTTCAACAGCGTAGAACACATTATGAGAGATGTTTCAGGGAGCTGGTTGATCCGTTATATGCATGCTAATGGGGCAAGTATGTTTCTCATTGCGGTTCACCTTCATATTTTTCATGGTCTATATCATGCGAGTTATAGCAGTCCTAGGGAATTTGTTCGGTGTCTCGGAGTTCTCATCTTCCTATTCATGATTGTGACAGCTTTTACAGGATACGTACTACCTTGGGGTCAGATGAGCTTTTGGGGAGCAACTGTAATTACAAGCTTAGCTAGCGCCATACCCGTAGTAGGAGATACCATAGTGACTTGGCTTTGGGGTGGTTTCTCCGTGGACAATGCCACCTTAAATCTGAATGGGCCGAATAGAAAATCGAGTCTGGCGTGTAGATGTAGAGCAGGTCGGACACTTGAACGGATGAGACGCATGGCAAGCTCACTAGCGTGTAGAGCTAAGCAGGTCAGGTTCCAGGTTAGAGCATACAGATCAGGCATCGTACCATCTAGTCCTCAACATGCAAAATTGGTGTATACATCGTCTCATATTTCTAAGCATGGAGCTAGTAGTAGAATCTCTTACCTGGAGATTTACTTGACAAGTCCTAACCGCGAGGCAGTACGCTTTCCAAGCGACGAGGTCCTAACTGTGTAA

Coding sequence (CDS)

ATGCATTACACACCTCATGTGGATCTAGCTTTCAACAGCGTAGAACACATTATGAGAGATGTTTCAGGGAGCTGGTTGATCCGTTATATGCATGCTAATGGGGCAAGTATGTTTCTCATTGCGGTTCACCTTCATATTTTTCATGGTCTATATCATGCGAGTTATAGCAGTCCTAGGGAATTTGTTCGGTGTCTCGGAGTTCTCATCTTCCTATTCATGATTGTGACAGCTTTTACAGGATACGTACTACCTTGGGGTCAGATGAGCTTTTGGGGAGCAACTGTAATTACAAGCTTAGCTAGCGCCATACCCGTAGTAGGAGATACCATAGTGACTTGGCTTTGGGGTGGTTTCTCCGTGGACAATGCCACCTTAAATCTGAATGGGCCGAATAGAAAATCGAGTCTGGCGTGTAGATGTAGAGCAGGTCGGACACTTGAACGGATGAGACGCATGGCAAGCTCACTAGCGTGTAGAGCTAAGCAGGTCAGGTTCCAGGTTAGAGCATACAGATCAGGCATCGTACCATCTAGTCCTCAACATGCAAAATTGGTGTATACATCGTCTCATATTTCTAAGCATGGAGCTAGTAGTAGAATCTCTTACCTGGAGATTTACTTGACAAGTCCTAACCGCGAGGCAGTACGCTTTCCAAGCGACGAGGTCCTAACTGTGTAA

Protein sequence

MHYTPHVDLAFNSVEHIMRDVSGSWLIRYMHANGASMFLIAVHLHIFHGLYHASYSSPREFVRCLGVLIFLFMIVTAFTGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSVDNATLNLNGPNRKSSLACRCRAGRTLERMRRMASSLACRAKQVRFQVRAYRSGIVPSSPQHAKLVYTSSHISKHGASSRISYLEIYLTSPNREAVRFPSDEVLTV

Homology

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BLAST of MELO.jh101317.1 vs. NCBI nr
Match: AEN56114.1 (apocytochrome b [Cucumis melo subsp. melo] >AZP40304.1 apocytochrome b [Cucumis melo var. momordica] >KAA0067361.1 apocytochrome b [Cucumis melo var. makuwa])

HSP 1 Score: 254 bits (650), Expect = 4.96e-80
Identity = 122/126 (96.83%), Postives = 123/126 (97.62%), Query Frame = 0


Query: 1   MHYTPHVDLAFNSVEHIMRDVSGSWLIRYMHANGASMFLIAVHLHIFHGLYHASYSSPRE 60
           MHYTPHVDLAFNSVEHIMRDVSG WL+RYMHANGASMFLI VHLHIF GLYHASYSSPRE
Sbjct: 58  MHYTPHVDLAFNSVEHIMRDVSGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSPRE 117

Query: 61  FVRCLGVLIFLFMIVTAFTGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSV 120
           FVRCLGVLIFLFMIVTAFTGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSV
Sbjct: 118 FVRCLGVLIFLFMIVTAFTGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSV 177

Query: 121 DNATLN 126
           DNATLN
Sbjct: 178 DNATLN 183

[Close]

BLAST of MELO.jh101317.1 vs. NCBI nr
Match: ACV71661.1 (apocytochrome b, partial [Fagus grandifolia])

HSP 1 Score: 247 bits (631), Expect = 5.71e-79
Identity = 117/126 (92.86%), Postives = 121/126 (96.03%), Query Frame = 0


Query: 1   MHYTPHVDLAFNSVEHIMRDVSGSWLIRYMHANGASMFLIAVHLHIFHGLYHASYSSPRE 60
           MH+TPHVDLAFNSVEH+MRDV G WL+RYMHANGASMFLI VHLHIF GLYHASYSSPRE
Sbjct: 51  MHHTPHVDLAFNSVEHVMRDVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSPRE 110

Query: 61  FVRCLGVLIFLFMIVTAFTGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSV 120
           FVRCLGV+IFL MIVTAFTGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSV
Sbjct: 111 FVRCLGVVIFLLMIVTAFTGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSV 170

Query: 121 DNATLN 126
           DNATLN
Sbjct: 171 DNATLN 176

[Close]

BLAST of MELO.jh101317.1 vs. NCBI nr
Match: ABS10779.1 (apocytochrome b, partial [Stachystemon axillaris])

HSP 1 Score: 247 bits (631), Expect = 5.90e-79
Identity = 118/126 (93.65%), Postives = 120/126 (95.24%), Query Frame = 0


Query: 1   MHYTPHVDLAFNSVEHIMRDVSGSWLIRYMHANGASMFLIAVHLHIFHGLYHASYSSPRE 60
           MHYTPHVDLAFNSVEHIMRDV G WL+RYMHANGASMFLI VHLHIF GLYHASYSSPRE
Sbjct: 50  MHYTPHVDLAFNSVEHIMRDVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSPRE 109

Query: 61  FVRCLGVLIFLFMIVTAFTGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSV 120
           FVRCLGV+IFL MIVTAF GYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSV
Sbjct: 110 FVRCLGVVIFLLMIVTAFIGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSV 169

Query: 121 DNATLN 126
           DNATLN
Sbjct: 170 DNATLN 175

[Close]

BLAST of MELO.jh101317.1 vs. NCBI nr
Match: AAD03035.1 (apocytochrome b, partial [Solanum tuberosum])

HSP 1 Score: 246 bits (627), Expect = 6.00e-79
Identity = 117/126 (92.86%), Postives = 119/126 (94.44%), Query Frame = 0


Query: 1   MHYTPHVDLAFNSVEHIMRDVSGSWLIRYMHANGASMFLIAVHLHIFHGLYHASYSSPRE 60
           MHYTPHVDLAFNSVEHIMRDV G WL+RYMHANGASMF I VHLHIF GLYHASYSSPRE
Sbjct: 58  MHYTPHVDLAFNSVEHIMRDVEGGWLLRYMHANGASMFFIVVHLHIFRGLYHASYSSPRE 117

Query: 61  FVRCLGVLIFLFMIVTAFTGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSV 120
           FVRCLGV+IFL MIVTAF GYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSV
Sbjct: 118 FVRCLGVVIFLLMIVTAFIGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSV 177

Query: 121 DNATLN 126
           DNATLN
Sbjct: 178 DNATLN 183

[Close]

BLAST of MELO.jh101317.1 vs. NCBI nr
Match: ABS10720.1 (apocytochrome b, partial [Erythrococca sp. Cheek s.n.])

HSP 1 Score: 247 bits (631), Expect = 6.09e-79
Identity = 118/126 (93.65%), Postives = 120/126 (95.24%), Query Frame = 0


Query: 1   MHYTPHVDLAFNSVEHIMRDVSGSWLIRYMHANGASMFLIAVHLHIFHGLYHASYSSPRE 60
           MHYTPHVDLAFNSVEHIMRDV G WL+RYMHANGASMFLI VHLHIF GLYHASYSSPRE
Sbjct: 51  MHYTPHVDLAFNSVEHIMRDVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSPRE 110

Query: 61  FVRCLGVLIFLFMIVTAFTGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSV 120
           FVRCLGV+IFL MIVTAF GYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSV
Sbjct: 111 FVRCLGVVIFLLMIVTAFIGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSV 170

Query: 121 DNATLN 126
           DNATLN
Sbjct: 171 DNATLN 176

[Close]

BLAST of MELO.jh101317.1 vs. ExPASy Swiss-Prot
Match: Q9ZZT8 (Cytochrome b OS=Pisum sativum OX=3888 GN=MT-CYB PE=3 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 1.3e-64
Identity = 117/126 (92.86%), Postives = 120/126 (95.24%), Query Frame = 0


Query: 1   MHYTPHVDLAFNSVEHIMRDVSGSWLIRYMHANGASMFLIAVHLHIFHGLYHASYSSPRE 60
           MHYTPHVDLAFNSVEH+MRDV G WL+RYMHANGASMFLI VHLHIF GLYHASYSSPRE
Sbjct: 58  MHYTPHVDLAFNSVEHVMRDVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSPRE 117

Query: 61  FVRCLGVLIFLFMIVTAFTGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSV 120
           FVRCLGV+IFL MIVTAFTGYV PWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSV
Sbjct: 118 FVRCLGVVIFLLMIVTAFTGYVPPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSV 177

Query: 121 DNATLN 127
           DNATLN
Sbjct: 178 DNATLN 183

[Close]

BLAST of MELO.jh101317.1 vs. ExPASy Swiss-Prot
Match: P05718 (Cytochrome b OS=Vicia faba OX=3906 GN=MT-CYB PE=3 SV=2)

HSP 1 Score: 247.7 bits (631), Expect = 1.3e-64
Identity = 117/126 (92.86%), Postives = 120/126 (95.24%), Query Frame = 0


Query: 1   MHYTPHVDLAFNSVEHIMRDVSGSWLIRYMHANGASMFLIAVHLHIFHGLYHASYSSPRE 60
           MHYTPHVDLAFNSVEH+MRDV G WL+RYMHANGASMFLI VHLHIF GLYHASYSSPRE
Sbjct: 58  MHYTPHVDLAFNSVEHVMRDVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSPRE 117

Query: 61  FVRCLGVLIFLFMIVTAFTGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSV 120
           FVRCLGV+IFL MIVTAFTGYV PWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSV
Sbjct: 118 FVRCLGVVIFLLMIVTAFTGYVPPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSV 177

Query: 121 DNATLN 127
           DNATLN
Sbjct: 178 DNATLN 183

[Close]

BLAST of MELO.jh101317.1 vs. ExPASy Swiss-Prot
Match: P04165 (Cytochrome b OS=Zea mays OX=4577 GN=MT-CYB PE=3 SV=2)

HSP 1 Score: 242.7 bits (618), Expect = 4.1e-63
Identity = 116/126 (92.06%), Postives = 118/126 (93.65%), Query Frame = 0


Query: 1   MHYTPHVDLAFNSVEHIMRDVSGSWLIRYMHANGASMFLIAVHLHIFHGLYHASYSSPRE 60
           MHYTPHVDLAFNSVEHIMRDV G WL+RYMHANGASMFLI VHLHIF GLYHASYSSPRE
Sbjct: 58  MHYTPHVDLAFNSVEHIMRDVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSPRE 117

Query: 61  FVRCLGVLIFLFMIVTAFTGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSV 120
           FV CLGV+IFL MIVTAF GYV PWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSV
Sbjct: 118 FVWCLGVVIFLLMIVTAFIGYVPPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSV 177

Query: 121 DNATLN 127
           DNATLN
Sbjct: 178 DNATLN 183

[Close]

BLAST of MELO.jh101317.1 vs. ExPASy Swiss-Prot
Match: P42792 (Cytochrome b OS=Arabidopsis thaliana OX=3702 GN=MT-CYB PE=1 SV=2)

HSP 1 Score: 239.2 bits (609), Expect = 4.5e-62
Identity = 114/126 (90.48%), Postives = 118/126 (93.65%), Query Frame = 0


Query: 1   MHYTPHVDLAFNSVEHIMRDVSGSWLIRYMHANGASMFLIAVHLHIFHGLYHASYSSPRE 60
           MHYTPHVDLAFNSVEHIMRDV G WL+RYMHANGASMF I V+LHIF GLY+ASYSSPRE
Sbjct: 58  MHYTPHVDLAFNSVEHIMRDVEGGWLLRYMHANGASMFFIVVYLHIFRGLYYASYSSPRE 117

Query: 61  FVRCLGVLIFLFMIVTAFTGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSV 120
           FV CLGV+IFL MIVTAF GYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSV
Sbjct: 118 FVWCLGVVIFLLMIVTAFIGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSV 177

Query: 121 DNATLN 127
           DNATLN
Sbjct: 178 DNATLN 183

[Close]

BLAST of MELO.jh101317.1 vs. ExPASy Swiss-Prot
Match: P0C524 (Cytochrome b OS=Oryza sativa subsp. japonica OX=39947 GN=MT-CYB PE=2 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 4.5e-62
Identity = 114/126 (90.48%), Postives = 118/126 (93.65%), Query Frame = 0


Query: 1   MHYTPHVDLAFNSVEHIMRDVSGSWLIRYMHANGASMFLIAVHLHIFHGLYHASYSSPRE 60
           MHYTPHVDLAFNSVEHIMRDV G WL+RYMHANGASMF I V+LHIF GLY+ASYSSPRE
Sbjct: 58  MHYTPHVDLAFNSVEHIMRDVEGGWLLRYMHANGASMFFIVVYLHIFRGLYYASYSSPRE 117

Query: 61  FVRCLGVLIFLFMIVTAFTGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSV 120
           FV CLGV+IFL MIVTAF GYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSV
Sbjct: 118 FVWCLGVVIFLLMIVTAFIGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSV 177

Query: 121 DNATLN 127
           DNATLN
Sbjct: 178 DNATLN 183

[Close]

BLAST of MELO.jh101317.1 vs. ExPASy TrEMBL
Match: A0A5A7VP81 (Cytochrome b OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43700G00010 PE=4 SV=1)

HSP 1 Score: 254 bits (650), Expect = 2.40e-80
Identity = 122/126 (96.83%), Postives = 123/126 (97.62%), Query Frame = 0


Query: 1   MHYTPHVDLAFNSVEHIMRDVSGSWLIRYMHANGASMFLIAVHLHIFHGLYHASYSSPRE 60
           MHYTPHVDLAFNSVEHIMRDVSG WL+RYMHANGASMFLI VHLHIF GLYHASYSSPRE
Sbjct: 58  MHYTPHVDLAFNSVEHIMRDVSGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSPRE 117

Query: 61  FVRCLGVLIFLFMIVTAFTGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSV 120
           FVRCLGVLIFLFMIVTAFTGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSV
Sbjct: 118 FVRCLGVLIFLFMIVTAFTGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSV 177

Query: 121 DNATLN 126
           DNATLN
Sbjct: 178 DNATLN 183

[Close]

BLAST of MELO.jh101317.1 vs. ExPASy TrEMBL
Match: G3EU30 (Cytochrome b OS=Cucumis melo subsp. melo OX=412675 GN=cob PE=3 SV=1)

HSP 1 Score: 254 bits (650), Expect = 2.40e-80
Identity = 122/126 (96.83%), Postives = 123/126 (97.62%), Query Frame = 0


Query: 1   MHYTPHVDLAFNSVEHIMRDVSGSWLIRYMHANGASMFLIAVHLHIFHGLYHASYSSPRE 60
           MHYTPHVDLAFNSVEHIMRDVSG WL+RYMHANGASMFLI VHLHIF GLYHASYSSPRE
Sbjct: 58  MHYTPHVDLAFNSVEHIMRDVSGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSPRE 117

Query: 61  FVRCLGVLIFLFMIVTAFTGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSV 120
           FVRCLGVLIFLFMIVTAFTGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSV
Sbjct: 118 FVRCLGVLIFLFMIVTAFTGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSV 177

Query: 121 DNATLN 126
           DNATLN
Sbjct: 178 DNATLN 183

[Close]

BLAST of MELO.jh101317.1 vs. ExPASy TrEMBL
Match: A0A3Q9CS28 (Cytochrome b OS=Cucumis melo var. momordica OX=2034244 GN=cob PE=3 SV=1)

HSP 1 Score: 254 bits (650), Expect = 2.40e-80
Identity = 122/126 (96.83%), Postives = 123/126 (97.62%), Query Frame = 0


Query: 1   MHYTPHVDLAFNSVEHIMRDVSGSWLIRYMHANGASMFLIAVHLHIFHGLYHASYSSPRE 60
           MHYTPHVDLAFNSVEHIMRDVSG WL+RYMHANGASMFLI VHLHIF GLYHASYSSPRE
Sbjct: 58  MHYTPHVDLAFNSVEHIMRDVSGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSPRE 117

Query: 61  FVRCLGVLIFLFMIVTAFTGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSV 120
           FVRCLGVLIFLFMIVTAFTGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSV
Sbjct: 118 FVRCLGVLIFLFMIVTAFTGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSV 177

Query: 121 DNATLN 126
           DNATLN
Sbjct: 178 DNATLN 183

[Close]

BLAST of MELO.jh101317.1 vs. ExPASy TrEMBL
Match: C8YQ18 (Cytochrome b (Fragment) OS=Fagus grandifolia OX=60423 GN=cob PE=4 SV=1)

HSP 1 Score: 247 bits (631), Expect = 2.76e-79
Identity = 117/126 (92.86%), Postives = 121/126 (96.03%), Query Frame = 0


Query: 1   MHYTPHVDLAFNSVEHIMRDVSGSWLIRYMHANGASMFLIAVHLHIFHGLYHASYSSPRE 60
           MH+TPHVDLAFNSVEH+MRDV G WL+RYMHANGASMFLI VHLHIF GLYHASYSSPRE
Sbjct: 51  MHHTPHVDLAFNSVEHVMRDVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSPRE 110

Query: 61  FVRCLGVLIFLFMIVTAFTGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSV 120
           FVRCLGV+IFL MIVTAFTGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSV
Sbjct: 111 FVRCLGVVIFLLMIVTAFTGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSV 170

Query: 121 DNATLN 126
           DNATLN
Sbjct: 171 DNATLN 176

[Close]

BLAST of MELO.jh101317.1 vs. ExPASy TrEMBL
Match: A7KB93 (Cytochrome b (Fragment) OS=Stachystemon axillaris OX=124839 GN=cob PE=4 SV=1)

HSP 1 Score: 247 bits (631), Expect = 2.85e-79
Identity = 118/126 (93.65%), Postives = 120/126 (95.24%), Query Frame = 0


Query: 1   MHYTPHVDLAFNSVEHIMRDVSGSWLIRYMHANGASMFLIAVHLHIFHGLYHASYSSPRE 60
           MHYTPHVDLAFNSVEHIMRDV G WL+RYMHANGASMFLI VHLHIF GLYHASYSSPRE
Sbjct: 50  MHYTPHVDLAFNSVEHIMRDVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSPRE 109

Query: 61  FVRCLGVLIFLFMIVTAFTGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSV 120
           FVRCLGV+IFL MIVTAF GYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSV
Sbjct: 110 FVRCLGVVIFLLMIVTAFIGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSV 169

Query: 121 DNATLN 126
           DNATLN
Sbjct: 170 DNATLN 175

[Close]

BLAST of MELO.jh101317.1 vs. TAIR 10
Match: AT2G07727.1 (Di-haem cytochrome, transmembrane;Cytochrome b/b6, C-terminal )

HSP 1 Score: 243.0 bits (619), Expect = 2.2e-64
Identity = 116/126 (92.06%), Postives = 119/126 (94.44%), Query Frame = 0


Query: 1   MHYTPHVDLAFNSVEHIMRDVSGSWLIRYMHANGASMFLIAVHLHIFHGLYHASYSSPRE 60
           MHYTPHVDLAFNSVEHIMRDV G WL+RYMHANGASMFLI V+LHIF GLYHASYSSPRE
Sbjct: 58  MHYTPHVDLAFNSVEHIMRDVEGGWLLRYMHANGASMFLIVVYLHIFRGLYHASYSSPRE 117

Query: 61  FVRCLGVLIFLFMIVTAFTGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSV 120
           FV CLGV+IFL MIVTAF GYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSV
Sbjct: 118 FVWCLGVVIFLLMIVTAFIGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSV 177

Query: 121 DNATLN 127
           DNATLN
Sbjct: 178 DNATLN 183

[Close]

BLAST of MELO.jh101317.1 vs. TAIR 10
Match: ATMG00220.1 (apocytochrome b )

HSP 1 Score: 243.0 bits (619), Expect = 2.2e-64
Identity = 116/126 (92.06%), Postives = 119/126 (94.44%), Query Frame = 0


Query: 1   MHYTPHVDLAFNSVEHIMRDVSGSWLIRYMHANGASMFLIAVHLHIFHGLYHASYSSPRE 60
           MHYTPHVDLAFNSVEHIMRDV G WL+RYMHANGASMFLI V+LHIF GLYHASYSSPRE
Sbjct: 58  MHYTPHVDLAFNSVEHIMRDVEGGWLLRYMHANGASMFLIVVYLHIFRGLYHASYSSPRE 117

Query: 61  FVRCLGVLIFLFMIVTAFTGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSV 120
           FV CLGV+IFL MIVTAF GYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSV
Sbjct: 118 FVWCLGVVIFLLMIVTAFIGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSV 177

Query: 121 DNATLN 127
           DNATLN
Sbjct: 178 DNATLN 183

[Close]

BLAST of MELO.jh101317.1 vs. TAIR 10
Match: ATCG00720.1 (photosynthetic electron transfer B )

HSP 1 Score: 90.9 bits (224), Expect = 1.4e-18
Identity = 46/124 (37.10%), Postives = 68/124 (54.84%), Query Frame = 0


Query: 2   HYTPHVDLAFNSVEHIMRDVSGSWLIRYMHANGASMFLIAVHLHIFHGLYHASYSSPREF 61
           +Y P V  AF SV++IM + +  WLIR +H   ASM ++ + LH+F       +  PRE 
Sbjct: 57  YYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPREL 116

Query: 62  VRCLGVLIFLFMIVTAFTGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSVD 121
               GV++ +       TGY LPW Q+ +W   ++T +  AIPV+G  +V  L G  SV 
Sbjct: 117 TWVTGVVLGVLTASFGVTGYSLPWDQIGYWAVKIVTGVPDAIPVIGSPLVELLRGSASVG 176

Query: 122 NATL 126
            +TL
Sbjct: 177 QSTL 180

The following BLAST results are available for this feature:

BLAST of MELO.jh101317.1 vs. NCBI nr


Match Name	E-value	Identity	Description
AEN56114.1	4.96e-80	96.83	apocytochrome b [Cucumis melo subsp. melo] >AZP40304.1 apocytochrome b [Cucumis ...	[more]
ACV71661.1	5.71e-79	92.86	apocytochrome b, partial [Fagus grandifolia]	[more]
ABS10779.1	5.90e-79	93.65	apocytochrome b, partial [Stachystemon axillaris]	[more]
AAD03035.1	6.00e-79	92.86	apocytochrome b, partial [Solanum tuberosum]	[more]
ABS10720.1	6.09e-79	93.65	apocytochrome b, partial [Erythrococca sp. Cheek s.n.]	[more]

BLAST of MELO.jh101317.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZZT8	1.3e-64	92.86	Cytochrome b OS=Pisum sativum OX=3888 GN=MT-CYB PE=3 SV=1	[more]
P05718	1.3e-64	92.86	Cytochrome b OS=Vicia faba OX=3906 GN=MT-CYB PE=3 SV=2	[more]
P04165	4.1e-63	92.06	Cytochrome b OS=Zea mays OX=4577 GN=MT-CYB PE=3 SV=2	[more]
P42792	4.5e-62	90.48	Cytochrome b OS=Arabidopsis thaliana OX=3702 GN=MT-CYB PE=1 SV=2	[more]
P0C524	4.5e-62	90.48	Cytochrome b OS=Oryza sativa subsp. japonica OX=39947 GN=MT-CYB PE=2 SV=1	[more]

BLAST of MELO.jh101317.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VP81	2.40e-80	96.83	Cytochrome b OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43700G00010...	[more]
G3EU30	2.40e-80	96.83	Cytochrome b OS=Cucumis melo subsp. melo OX=412675 GN=cob PE=3 SV=1	[more]
A0A3Q9CS28	2.40e-80	96.83	Cytochrome b OS=Cucumis melo var. momordica OX=2034244 GN=cob PE=3 SV=1	[more]
C8YQ18	2.76e-79	92.86	Cytochrome b (Fragment) OS=Fagus grandifolia OX=60423 GN=cob PE=4 SV=1	[more]
A7KB93	2.85e-79	93.65	Cytochrome b (Fragment) OS=Stachystemon axillaris OX=124839 GN=cob PE=4 SV=1	[more]

BLAST of MELO.jh101317.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G07727.1	2.2e-64	92.06	Di-haem cytochrome, transmembrane;Cytochrome b/b6, C-terminal	[more]
ATMG00220.1	2.2e-64	92.06	apocytochrome b	[more]
ATCG00720.1	1.4e-18	37.10	photosynthetic electron transfer B	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005797	Cytochrome b/b6, N-terminal	PFAM	PF00033	Cytochrome_B	coord: 1..126 e-value: 1.2E-51 score: 175.2
IPR005797	Cytochrome b/b6, N-terminal	PROSITE	PS51002	CYTB_NTER	coord: 1..126 score: 23.094088
IPR005797	Cytochrome b/b6, N-terminal	CDD	cd00284	Cytochrome_b_N	coord: 1..126 e-value: 4.42453E-65 score: 198.361
IPR027387	Cytochrome b/b6-like domain superfamily	GENE3D	1.20.810.10	Cytochrome Bc1 Complex; Chain C	coord: 1..127 e-value: 4.7E-55 score: 188.6
None	No IPR available	PANTHER	PTHR19271:SF16	CYTOCHROME B	coord: 1..127
None	No IPR available	PANTHER	PTHR19271	CYTOCHROME B	coord: 1..127
IPR016174	Di-haem cytochrome, transmembrane	SUPERFAMILY	81342	Transmembrane di-heme cytochromes	coord: 1..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO.jh101317.1.t1	MELO.jh101317.1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022904	respiratory electron transport chain
cellular_component	GO:0016020	membrane
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0016491	oxidoreductase activity