MELO.jh101245.1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh101245.1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Reverse transcriptase
Location	chr03: 4800745 .. 4802367 (-)
RNA-Seq Expression	MELO.jh101245.1
Synteny	MELO.jh101245.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGCCACGTAGAGGTGCACGCCGAGGAGGTGGTAGGGGAGGCAGAGGTGCCGGTCGTGGCCAGCCGGAGGCGCCACCTGCTGCACCGGCAGTCGACCCAAATGCACCGGTCACCCAGGCGGATCTCGCCGCGATGGAGCGGCGCTATCAGGACATGCTGCAAGCTGCTTTGGCGCCTTTCCTAGCCGCCCAGCAGAACCAGGCCGCCCAGCAGAACCAGGCCGCCCCTGCTCAGGCCCAAGCCGTTGTTCCTCCAGCCCCTGAGGAAGCTCCACCAGTACCAGTTCAACTGTCGGCCGAGGCGAAACACTTACGGGACTTTAGGAAGTATAATCCTAAGACCTTTGACGGATCTATGGACAACCCCACAAAGGCCCAAATGTGGTTGACGTCCATAGAGACTATTTTCCGGTACATGAAGTGCCCAGAAGACCAGAAGGTGCAGTGTGCAGTCTTCTTCTTGGAGGACCGAGGCACCGCCTGGTGGGAGACCGCTGAGAGAATGCTGGGGGGCGATGTCAGCAAGATAACTTGGGAGCAGTTCAAGGAGAACTTCTATGCTAAGTTCTTCTCTGCCAATGTGAAGCACGCCAAGCTGCAAGAGTTCCTAAACTTGGAGCAAGGCGACATGACGGTGGAGCAGTACGACGCCGAGTTCGATATGCTGTCCCGCTTTGCTCCCGATATGGTAAGGGATGAGGCTGCCAGGACGGAGAAATTCGTTAGAGGACTCAGGCTAGACATTCAGGGCATTGTCAGAGCTCTCCGCCCAGCCACGCATGCTGATGCACTACGTATAGCACTGGATTTGAGCCTGCCTGAGAGAGCCGATTCGTCTAAGGCTGCCGGCAGAGGGTCAGCCTTGGGACAAAAGAGAAAGGTTGAGACGCAGCCTGACGTAGCACCGCAGCGAACACTGAGATCAGGAGGTGTTTTCCAGAGACACCGACGGGAGCTGGCAGCAGCCGGGAGGACGCTGAGAGAGCTACCCGCTTGTACTACCTGTGGGAGAGTCCACGGAGGTCGTTGTTTGGCTGGAAGTGGAGTCTGTTTCAGATGTAGACAGCCGGGGCATACTGCTGATGTGTGTCCTCAGAAACCCTTTGAGACGACACCGCCCCAGCCTTCTGCGGCCCAGCAGGGGAGAGTTTTCGCCACTACCCGGCAGGAGGCCGAGCGAGCTGGCACAGTGGTGACAGGTACGCTCCCAATTTTGGGGCATTATGCTTTTGTGCTATTTGACTCTGGGTCATCCCACTCGTTTATATCCTCAGTTTTCGTTCAACATGTGGGTTTGGAGGTAGAACCCTTGGGTAGTGTTTTGTCGGTTTCTACTCCATCTGGGGAGGTCCTGTTGTCCAAAGAACAAATAAAGGCATGTCGGGTAGAGATAGCGAATCGTATGTTAGACGTGACCTTGCTAGTGTTAGACATGCAGGATTTTGATGTGATACTAGGCATGGATTGGCTGTCAGCCAACCATGCAAATATAGACTGTTTTGGCAAGGAAGTTATCTTCAACCCTCCCTCCGGGGCTAGTTTCAAATTCAGGGGGGCAGGCATGGTATGTATACCCAAGGTCATCTCAGCCAGGGTACTTGGGGCATCTTGGCAAGCGTAG

mRNA sequence

ATGCCGCCACGTAGAGGTGCACGCCGAGGAGGTGGTAGGGGAGGCAGAGGTGCCGGTCGTGGCCAGCCGGAGGCGCCACCTGCTGCACCGGCAGTCGACCCAAATGCACCGGTCACCCAGGCGGATCTCGCCGCGATGGAGCGGCGCTATCAGGACATGCTGCAAGCTGCTTTGGCGCCTTTCCTAGCCGCCCAGCAGAACCAGGCCGCCCAGCAGAACCAGGCCGCCCCTGCTCAGGCCCAAGCCGTTGTTCCTCCAGCCCCTGAGGAAGCTCCACCAGTACCAGTTCAACTGTCGGCCGAGGCGAAACACTTACGGGACTTTAGGAAGTATAATCCTAAGACCTTTGACGGATCTATGGACAACCCCACAAAGGCCCAAATGTGGTTGACGTCCATAGAGACTATTTTCCGGTACATGAAGTGCCCAGAAGACCAGAAGGTGCAGTGTGCAGTCTTCTTCTTGGAGGACCGAGGCACCGCCTGGTGGGAGACCGCTGAGAGAATGCTGGGGGGCGATGTCAGCAAGATAACTTGGGAGCAGTTCAAGGAGAACTTCTATGCTAAGTTCTTCTCTGCCAATGTGAAGCACGCCAAGCTGCAAGAGTTCCTAAACTTGGAGCAAGGCGACATGACGGTGGAGCAGTACGACGCCGAGTTCGATATGCTGTCCCGCTTTGCTCCCGATATGGTAAGGGATGAGGCTGCCAGGACGGAGAAATTCGTTAGAGGACTCAGGCTAGACATTCAGGGCATTGTCAGAGCTCTCCGCCCAGCCACGCATGCTGATGCACTACGTATAGCACTGGATTTGAGCCTGCCTGAGAGAGCCGATTCGTCTAAGGCTGCCGGCAGAGGGTCAGCCTTGGGACAAAAGAGAAAGGTTGAGACGCAGCCTGACGTAGCACCGCAGCGAACACTGAGATCAGGAGGTGTTTTCCAGAGACACCGACGGGAGCTGGCAGCAGCCGGGAGGACGCTGAGAGAGCTACCCGCTTGTACTACCTGTGGGAGAGTCCACGGAGGTCGTTGTTTGGCTGGAAGTGGAGTCTGTTTCAGATGTAGACAGCCGGGGCATACTGCTGATGTGTGTCCTCAGAAACCCTTTGAGACGACACCGCCCCAGCCTTCTGCGGCCCAGCAGGGGAGAGTTTTCGCCACTACCCGGCAGGAGGCCGAGCGAGCTGGCACAGTGGTGACAGGTACGCTCCCAATTTTGGGGCATTATGCTTTTGTGCTATTTGACTCTGGGTCATCCCACTCGTTTATATCCTCAGTTTTCGTTCAACATGTGGGTTTGGAGGTAGAACCCTTGGGTAGTGTTTTGTCGGTTTCTACTCCATCTGGGGAGGTCCTGTTGTCCAAAGAACAAATAAAGGCATGTCGGGTAGAGATAGCGAATCGTATGTTAGACGTGACCTTGCTAGTGTTAGACATGCAGGATTTTGATGTGATACTAGGCATGGATTGGCTGTCAGCCAACCATGCAAATATAGACTGTTTTGGCAAGGAAGTTATCTTCAACCCTCCCTCCGGGGCTAGTTTCAAATTCAGGGGGGCAGGCATGGTATGTATACCCAAGGTCATCTCAGCCAGGGTACTTGGGGCATCTTGGCAAGCGTAG

Coding sequence (CDS)

ATGCCGCCACGTAGAGGTGCACGCCGAGGAGGTGGTAGGGGAGGCAGAGGTGCCGGTCGTGGCCAGCCGGAGGCGCCACCTGCTGCACCGGCAGTCGACCCAAATGCACCGGTCACCCAGGCGGATCTCGCCGCGATGGAGCGGCGCTATCAGGACATGCTGCAAGCTGCTTTGGCGCCTTTCCTAGCCGCCCAGCAGAACCAGGCCGCCCAGCAGAACCAGGCCGCCCCTGCTCAGGCCCAAGCCGTTGTTCCTCCAGCCCCTGAGGAAGCTCCACCAGTACCAGTTCAACTGTCGGCCGAGGCGAAACACTTACGGGACTTTAGGAAGTATAATCCTAAGACCTTTGACGGATCTATGGACAACCCCACAAAGGCCCAAATGTGGTTGACGTCCATAGAGACTATTTTCCGGTACATGAAGTGCCCAGAAGACCAGAAGGTGCAGTGTGCAGTCTTCTTCTTGGAGGACCGAGGCACCGCCTGGTGGGAGACCGCTGAGAGAATGCTGGGGGGCGATGTCAGCAAGATAACTTGGGAGCAGTTCAAGGAGAACTTCTATGCTAAGTTCTTCTCTGCCAATGTGAAGCACGCCAAGCTGCAAGAGTTCCTAAACTTGGAGCAAGGCGACATGACGGTGGAGCAGTACGACGCCGAGTTCGATATGCTGTCCCGCTTTGCTCCCGATATGGTAAGGGATGAGGCTGCCAGGACGGAGAAATTCGTTAGAGGACTCAGGCTAGACATTCAGGGCATTGTCAGAGCTCTCCGCCCAGCCACGCATGCTGATGCACTACGTATAGCACTGGATTTGAGCCTGCCTGAGAGAGCCGATTCGTCTAAGGCTGCCGGCAGAGGGTCAGCCTTGGGACAAAAGAGAAAGGTTGAGACGCAGCCTGACGTAGCACCGCAGCGAACACTGAGATCAGGAGGTGTTTTCCAGAGACACCGACGGGAGCTGGCAGCAGCCGGGAGGACGCTGAGAGAGCTACCCGCTTGTACTACCTGTGGGAGAGTCCACGGAGGTCGTTGTTTGGCTGGAAGTGGAGTCTGTTTCAGATGTAGACAGCCGGGGCATACTGCTGATGTGTGTCCTCAGAAACCCTTTGAGACGACACCGCCCCAGCCTTCTGCGGCCCAGCAGGGGAGAGTTTTCGCCACTACCCGGCAGGAGGCCGAGCGAGCTGGCACAGTGGTGACAGGTACGCTCCCAATTTTGGGGCATTATGCTTTTGTGCTATTTGACTCTGGGTCATCCCACTCGTTTATATCCTCAGTTTTCGTTCAACATGTGGGTTTGGAGGTAGAACCCTTGGGTAGTGTTTTGTCGGTTTCTACTCCATCTGGGGAGGTCCTGTTGTCCAAAGAACAAATAAAGGCATGTCGGGTAGAGATAGCGAATCGTATGTTAGACGTGACCTTGCTAGTGTTAGACATGCAGGATTTTGATGTGATACTAGGCATGGATTGGCTGTCAGCCAACCATGCAAATATAGACTGTTTTGGCAAGGAAGTTATCTTCAACCCTCCCTCCGGGGCTAGTTTCAAATTCAGGGGGGCAGGCATGGTATGTATACCCAAGGTCATCTCAGCCAGGGTACTTGGGGCATCTTGGCAAGCGTAG

Protein sequence

MPPRRGARRGGGRGGRGAGRGQPEAPPAAPAVDPNAPVTQADLAAMERRYQDMLQAALAPFLAAQQNQAAQQNQAAPAQAQAVVPPAPEEAPPVPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDIQGIVRALRPATHADALRIALDLSLPERADSSKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQPGHTADVCPQKPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVIFNPPSGASFKFRGAGMVCIPKVISARVLGASWQA

Homology

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BLAST of MELO.jh101245.1 vs. NCBI nr
Match: KAA0066365.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1009 bits (2610), Expect = 0.0
Identity = 516/531 (97.18%), Postives = 521/531 (98.12%), Query Frame = 0


Query: 1   MPPRRGARRGGGRGGRGAGRGQPEAPPAAPAVDPNAPVTQADLAAMERRYQDMLQAALAP 60
           MPPRRGARRGGGRGGRGAGRGQPEAPP APAVDPNAPVTQADLAAME+RYQDMLQAALAP
Sbjct: 59  MPPRRGARRGGGRGGRGAGRGQPEAPPVAPAVDPNAPVTQADLAAMEQRYQDMLQAALAP 118

Query: 61  FLAAQQNQAAQQNQAAPAQAQAVVPPAPEEAPPVPVQLSAEAKHLRDFRKYNPKTFDGSM 120
           FLAAQQ      NQAAP QAQAV PPAPEEA PVPVQLSAEAKHLRDFRKYNPKTFDGSM
Sbjct: 119 FLAAQQ------NQAAPVQAQAVAPPAPEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSM 178

Query: 121 DNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWE 180
           DNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWE
Sbjct: 179 DNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWE 238

Query: 181 QFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEK 240
           QFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEK
Sbjct: 239 QFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEK 298

Query: 241 FVRGLRLDIQGIVRALRPATHADALRIALDLSLPERADSSKAAGRGSALGQKRKVETQPD 300
           FVRGLRLD+QGIVRALRPATHADALRIALDLSLPERADSSKAAGRGSALGQKRKVETQPD
Sbjct: 299 FVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADSSKAAGRGSALGQKRKVETQPD 358

Query: 301 VAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQPGHT 360
           VAPQRTLRSGGVFQRHRRELAAAG+TLRELPACTTCGRVHGGRCLAGSGVCFRCRQPGHT
Sbjct: 359 VAPQRTLRSGGVFQRHRRELAAAGKTLRELPACTTCGRVHGGRCLAGSGVCFRCRQPGHT 418

Query: 361 ADVCPQKPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTGTLPILGHYAFVLFDSGSSH 420
           ADVCP+KPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTGTLPILGHYAFVLFDSGSSH
Sbjct: 419 ADVCPRKPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTGTLPILGHYAFVLFDSGSSH 478

Query: 421 SFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQ 480
           SFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQ
Sbjct: 479 SFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQ 538

Query: 481 DFDVILGMDWLSANHANIDCFGKEVIFNPPSGASFKFRGAGMVCIPKVISA 531
           DFDVILGMDWLSANHANIDCFGKEV+FNPPSGASFKFRGAGMVCIPKVISA
Sbjct: 539 DFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISA 583

[Close]

BLAST of MELO.jh101245.1 vs. NCBI nr
Match: KAA0025242.1 (pol protein [Cucumis melo var. makuwa] >KAA0036610.1 pol protein [Cucumis melo var. makuwa] >KAA0036783.1 pol protein [Cucumis melo var. makuwa] >KAA0041437.1 pol protein [Cucumis melo var. makuwa] >KAA0042939.1 pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1006 bits (2600), Expect = 0.0
Identity = 516/539 (95.73%), Postives = 523/539 (97.03%), Query Frame = 0


Query: 1   MPPRRGARRGGGRGGRGAGRGQPEAPPAAPAVDPNAPVTQADLAAMERRYQDMLQAALAP 60
           MPPRRG RRGGGRGGRGAGRGQPEAPP APAVDPNAPVTQADLAAME+RYQDMLQAALAP
Sbjct: 1   MPPRRGTRRGGGRGGRGAGRGQPEAPPVAPAVDPNAPVTQADLAAMEQRYQDMLQAALAP 60

Query: 61  FLAAQQNQAAQ--------QNQAAPAQAQAVVPPAPEEAPPVPVQLSAEAKHLRDFRKYN 120
           FLAAQQNQAA         Q QAAP QAQAV PPAPEEA PVPVQLSAEAKHLRDFRKYN
Sbjct: 61  FLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQLSAEAKHLRDFRKYN 120

Query: 121 PKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGG 180
           PKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGG
Sbjct: 121 PKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGG 180

Query: 181 DVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVR 240
           DVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVR
Sbjct: 181 DVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVR 240

Query: 241 DEAARTEKFVRGLRLDIQGIVRALRPATHADALRIALDLSLPERADSSKAAGRGSALGQK 300
           DEAARTEKFVRGLRLD+QGIVRALRPATHADALRIALDLSLPERAD+SKAAGRGSALGQK
Sbjct: 241 DEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRGSALGQK 300

Query: 301 RKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCF 360
           RKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCF
Sbjct: 301 RKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCF 360

Query: 361 RCRQPGHTADVCPQKPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTGTLPILGHYAFV 420
           RCRQPGHTAD+CP+KPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTGTLPILGHYAFV
Sbjct: 361 RCRQPGHTADMCPRKPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTGTLPILGHYAFV 420

Query: 421 LFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDV 480
           LFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDV
Sbjct: 421 LFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDV 480

Query: 481 TLLVLDMQDFDVILGMDWLSANHANIDCFGKEVIFNPPSGASFKFRGAGMVCIPKVISA 531
           TLLVLDMQDFDVILGMDWLSANHANIDC+GKEV+FNPPS ASFKFRGAGMVCIPKVISA
Sbjct: 481 TLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKVISA 539

[Close]

BLAST of MELO.jh101245.1 vs. NCBI nr
Match: KAA0033825.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1004 bits (2596), Expect = 0.0
Identity = 515/539 (95.55%), Postives = 522/539 (96.85%), Query Frame = 0


Query: 1    MPPRRGARRGGGRGGRGAGRGQPEAPPAAPAVDPNAPVTQADLAAMERRYQDMLQAALAP 60
            MPPRRG RRGGGRGGRGAGRGQPEAPP APAVDPNAPVTQADLAAME+RYQDMLQAALAP
Sbjct: 606  MPPRRGTRRGGGRGGRGAGRGQPEAPPVAPAVDPNAPVTQADLAAMEQRYQDMLQAALAP 665

Query: 61   FLAAQQNQAAQ--------QNQAAPAQAQAVVPPAPEEAPPVPVQLSAEAKHLRDFRKYN 120
            FLAAQQNQAA         Q QAAP QAQAV PPAPEEA PVPVQLS EAKHLRDFRKYN
Sbjct: 666  FLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQLSTEAKHLRDFRKYN 725

Query: 121  PKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGG 180
            PKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGG
Sbjct: 726  PKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGG 785

Query: 181  DVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVR 240
            DVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVR
Sbjct: 786  DVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVR 845

Query: 241  DEAARTEKFVRGLRLDIQGIVRALRPATHADALRIALDLSLPERADSSKAAGRGSALGQK 300
            DEAARTEKFVRGLRLD+QGIVRALRPATHADALRIALDLSLPERAD+SKAAGRGSALGQK
Sbjct: 846  DEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRGSALGQK 905

Query: 301  RKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCF 360
            RKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCF
Sbjct: 906  RKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCF 965

Query: 361  RCRQPGHTADVCPQKPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTGTLPILGHYAFV 420
            RCRQPGHTAD+CP+KPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTGTLPILGHYAFV
Sbjct: 966  RCRQPGHTADMCPRKPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTGTLPILGHYAFV 1025

Query: 421  LFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDV 480
            LFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDV
Sbjct: 1026 LFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDV 1085

Query: 481  TLLVLDMQDFDVILGMDWLSANHANIDCFGKEVIFNPPSGASFKFRGAGMVCIPKVISA 531
            TLLVLDMQDFDVILGMDWLSANHANIDC+GKEV+FNPPS ASFKFRGAGMVCIPKVISA
Sbjct: 1086 TLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKVISA 1144

[Close]

BLAST of MELO.jh101245.1 vs. NCBI nr
Match: TYK20443.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1004 bits (2596), Expect = 0.0
Identity = 515/539 (95.55%), Postives = 522/539 (96.85%), Query Frame = 0


Query: 1   MPPRRGARRGGGRGGRGAGRGQPEAPPAAPAVDPNAPVTQADLAAMERRYQDMLQAALAP 60
           MPPRRG RRGGGRGGRGAGRGQPEAPP APAVDPNAPVTQADLAAME+RYQDMLQAALAP
Sbjct: 323 MPPRRGTRRGGGRGGRGAGRGQPEAPPVAPAVDPNAPVTQADLAAMEQRYQDMLQAALAP 382

Query: 61  FLAAQQNQAAQ--------QNQAAPAQAQAVVPPAPEEAPPVPVQLSAEAKHLRDFRKYN 120
           FLAAQQNQAA         Q QAAP QAQAV PPAPEEA PVPVQLS EAKHLRDFRKYN
Sbjct: 383 FLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQLSTEAKHLRDFRKYN 442

Query: 121 PKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGG 180
           PKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGG
Sbjct: 443 PKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGG 502

Query: 181 DVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVR 240
           DVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVR
Sbjct: 503 DVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVR 562

Query: 241 DEAARTEKFVRGLRLDIQGIVRALRPATHADALRIALDLSLPERADSSKAAGRGSALGQK 300
           DEAARTEKFVRGLRLD+QGIVRALRPATHADALRIALDLSLPERAD+SKAAGRGSALGQK
Sbjct: 563 DEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRGSALGQK 622

Query: 301 RKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCF 360
           RKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCF
Sbjct: 623 RKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCF 682

Query: 361 RCRQPGHTADVCPQKPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTGTLPILGHYAFV 420
           RCRQPGHTAD+CP+KPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTGTLPILGHYAFV
Sbjct: 683 RCRQPGHTADMCPRKPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTGTLPILGHYAFV 742

Query: 421 LFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDV 480
           LFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDV
Sbjct: 743 LFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDV 802

Query: 481 TLLVLDMQDFDVILGMDWLSANHANIDCFGKEVIFNPPSGASFKFRGAGMVCIPKVISA 531
           TLLVLDMQDFDVILGMDWLSANHANIDC+GKEV+FNPPS ASFKFRGAGMVCIPKVISA
Sbjct: 803 TLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKVISA 861

[Close]

BLAST of MELO.jh101245.1 vs. NCBI nr
Match: TYK01576.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1004 bits (2596), Expect = 0.0
Identity = 515/539 (95.55%), Postives = 522/539 (96.85%), Query Frame = 0


Query: 1   MPPRRGARRGGGRGGRGAGRGQPEAPPAAPAVDPNAPVTQADLAAMERRYQDMLQAALAP 60
           MPPRRG RRGGGRGGRGAGRGQPEAPP APAVDPNAPVTQADLAAME+RYQDMLQAALAP
Sbjct: 324 MPPRRGTRRGGGRGGRGAGRGQPEAPPVAPAVDPNAPVTQADLAAMEQRYQDMLQAALAP 383

Query: 61  FLAAQQNQAAQ--------QNQAAPAQAQAVVPPAPEEAPPVPVQLSAEAKHLRDFRKYN 120
           FLAAQQNQAA         Q QAAP QAQAV PPAPEEA PVPVQLS EAKHLRDFRKYN
Sbjct: 384 FLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQLSTEAKHLRDFRKYN 443

Query: 121 PKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGG 180
           PKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGG
Sbjct: 444 PKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGG 503

Query: 181 DVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVR 240
           DVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVR
Sbjct: 504 DVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVR 563

Query: 241 DEAARTEKFVRGLRLDIQGIVRALRPATHADALRIALDLSLPERADSSKAAGRGSALGQK 300
           DEAARTEKFVRGLRLD+QGIVRALRPATHADALRIALDLSLPERAD+SKAAGRGSALGQK
Sbjct: 564 DEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRGSALGQK 623

Query: 301 RKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCF 360
           RKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCF
Sbjct: 624 RKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCF 683

Query: 361 RCRQPGHTADVCPQKPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTGTLPILGHYAFV 420
           RCRQPGHTAD+CP+KPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTGTLPILGHYAFV
Sbjct: 684 RCRQPGHTADMCPRKPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTGTLPILGHYAFV 743

Query: 421 LFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDV 480
           LFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDV
Sbjct: 744 LFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDV 803

Query: 481 TLLVLDMQDFDVILGMDWLSANHANIDCFGKEVIFNPPSGASFKFRGAGMVCIPKVISA 531
           TLLVLDMQDFDVILGMDWLSANHANIDC+GKEV+FNPPS ASFKFRGAGMVCIPKVISA
Sbjct: 804 TLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKVISA 862

[Close]

BLAST of MELO.jh101245.1 vs. ExPASy TrEMBL
Match: A0A5A7VKS7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G004330 PE=4 SV=1)

HSP 1 Score: 1009 bits (2610), Expect = 0.0
Identity = 516/531 (97.18%), Postives = 521/531 (98.12%), Query Frame = 0


Query: 1   MPPRRGARRGGGRGGRGAGRGQPEAPPAAPAVDPNAPVTQADLAAMERRYQDMLQAALAP 60
           MPPRRGARRGGGRGGRGAGRGQPEAPP APAVDPNAPVTQADLAAME+RYQDMLQAALAP
Sbjct: 59  MPPRRGARRGGGRGGRGAGRGQPEAPPVAPAVDPNAPVTQADLAAMEQRYQDMLQAALAP 118

Query: 61  FLAAQQNQAAQQNQAAPAQAQAVVPPAPEEAPPVPVQLSAEAKHLRDFRKYNPKTFDGSM 120
           FLAAQQ      NQAAP QAQAV PPAPEEA PVPVQLSAEAKHLRDFRKYNPKTFDGSM
Sbjct: 119 FLAAQQ------NQAAPVQAQAVAPPAPEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSM 178

Query: 121 DNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWE 180
           DNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWE
Sbjct: 179 DNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWE 238

Query: 181 QFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEK 240
           QFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEK
Sbjct: 239 QFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEK 298

Query: 241 FVRGLRLDIQGIVRALRPATHADALRIALDLSLPERADSSKAAGRGSALGQKRKVETQPD 300
           FVRGLRLD+QGIVRALRPATHADALRIALDLSLPERADSSKAAGRGSALGQKRKVETQPD
Sbjct: 299 FVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADSSKAAGRGSALGQKRKVETQPD 358

Query: 301 VAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQPGHT 360
           VAPQRTLRSGGVFQRHRRELAAAG+TLRELPACTTCGRVHGGRCLAGSGVCFRCRQPGHT
Sbjct: 359 VAPQRTLRSGGVFQRHRRELAAAGKTLRELPACTTCGRVHGGRCLAGSGVCFRCRQPGHT 418

Query: 361 ADVCPQKPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTGTLPILGHYAFVLFDSGSSH 420
           ADVCP+KPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTGTLPILGHYAFVLFDSGSSH
Sbjct: 419 ADVCPRKPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTGTLPILGHYAFVLFDSGSSH 478

Query: 421 SFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQ 480
           SFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQ
Sbjct: 479 SFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQ 538

Query: 481 DFDVILGMDWLSANHANIDCFGKEVIFNPPSGASFKFRGAGMVCIPKVISA 531
           DFDVILGMDWLSANHANIDCFGKEV+FNPPSGASFKFRGAGMVCIPKVISA
Sbjct: 539 DFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISA 583

[Close]

BLAST of MELO.jh101245.1 vs. ExPASy TrEMBL
Match: A0A5A7TSL0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold191G001340 PE=4 SV=1)

HSP 1 Score: 1006 bits (2600), Expect = 0.0
Identity = 516/539 (95.73%), Postives = 523/539 (97.03%), Query Frame = 0


Query: 1   MPPRRGARRGGGRGGRGAGRGQPEAPPAAPAVDPNAPVTQADLAAMERRYQDMLQAALAP 60
           MPPRRG RRGGGRGGRGAGRGQPEAPP APAVDPNAPVTQADLAAME+RYQDMLQAALAP
Sbjct: 1   MPPRRGTRRGGGRGGRGAGRGQPEAPPVAPAVDPNAPVTQADLAAMEQRYQDMLQAALAP 60

Query: 61  FLAAQQNQAAQ--------QNQAAPAQAQAVVPPAPEEAPPVPVQLSAEAKHLRDFRKYN 120
           FLAAQQNQAA         Q QAAP QAQAV PPAPEEA PVPVQLSAEAKHLRDFRKYN
Sbjct: 61  FLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQLSAEAKHLRDFRKYN 120

Query: 121 PKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGG 180
           PKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGG
Sbjct: 121 PKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGG 180

Query: 181 DVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVR 240
           DVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVR
Sbjct: 181 DVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVR 240

Query: 241 DEAARTEKFVRGLRLDIQGIVRALRPATHADALRIALDLSLPERADSSKAAGRGSALGQK 300
           DEAARTEKFVRGLRLD+QGIVRALRPATHADALRIALDLSLPERAD+SKAAGRGSALGQK
Sbjct: 241 DEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRGSALGQK 300

Query: 301 RKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCF 360
           RKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCF
Sbjct: 301 RKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCF 360

Query: 361 RCRQPGHTADVCPQKPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTGTLPILGHYAFV 420
           RCRQPGHTAD+CP+KPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTGTLPILGHYAFV
Sbjct: 361 RCRQPGHTADMCPRKPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTGTLPILGHYAFV 420

Query: 421 LFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDV 480
           LFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDV
Sbjct: 421 LFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDV 480

Query: 481 TLLVLDMQDFDVILGMDWLSANHANIDCFGKEVIFNPPSGASFKFRGAGMVCIPKVISA 531
           TLLVLDMQDFDVILGMDWLSANHANIDC+GKEV+FNPPS ASFKFRGAGMVCIPKVISA
Sbjct: 481 TLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKVISA 539

[Close]

BLAST of MELO.jh101245.1 vs. ExPASy TrEMBL
Match: A0A5D3CQB5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001420 PE=4 SV=1)

HSP 1 Score: 1004 bits (2596), Expect = 0.0
Identity = 515/539 (95.55%), Postives = 522/539 (96.85%), Query Frame = 0


Query: 1   MPPRRGARRGGGRGGRGAGRGQPEAPPAAPAVDPNAPVTQADLAAMERRYQDMLQAALAP 60
           MPPRRG RRGGGRGGRGAGRGQPEAPP APAVDPNAPVTQADLAAME+RYQDMLQAALAP
Sbjct: 1   MPPRRGTRRGGGRGGRGAGRGQPEAPPVAPAVDPNAPVTQADLAAMEQRYQDMLQAALAP 60

Query: 61  FLAAQQNQAAQ--------QNQAAPAQAQAVVPPAPEEAPPVPVQLSAEAKHLRDFRKYN 120
           FLAAQQNQAA         Q QAAP QAQAV PPAPEEA PVPVQLSAEAKHLRDFRKYN
Sbjct: 61  FLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQLSAEAKHLRDFRKYN 120

Query: 121 PKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGG 180
           PKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGG
Sbjct: 121 PKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGG 180

Query: 181 DVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVR 240
           DVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVR
Sbjct: 181 DVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVR 240

Query: 241 DEAARTEKFVRGLRLDIQGIVRALRPATHADALRIALDLSLPERADSSKAAGRGSALGQK 300
           DEAARTEKFVRGLRLD+QGIVRALRPATHADALRIALDLSLPERAD+SKAAGRGSALGQK
Sbjct: 241 DEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRGSALGQK 300

Query: 301 RKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCF 360
           RKVETQPDV PQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCF
Sbjct: 301 RKVETQPDVVPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCF 360

Query: 361 RCRQPGHTADVCPQKPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTGTLPILGHYAFV 420
           RCRQPGHTAD+CP+KPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTGTLPILGHYAFV
Sbjct: 361 RCRQPGHTADMCPRKPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTGTLPILGHYAFV 420

Query: 421 LFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDV 480
           LFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDV
Sbjct: 421 LFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDV 480

Query: 481 TLLVLDMQDFDVILGMDWLSANHANIDCFGKEVIFNPPSGASFKFRGAGMVCIPKVISA 531
           TLLVLDMQDFDVILGMDWLSANHANIDC+GKEV+FNPPS ASFKFRGAGMVCIPKVISA
Sbjct: 481 TLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKVISA 539

[Close]

BLAST of MELO.jh101245.1 vs. ExPASy TrEMBL
Match: A0A5A7UBS1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13G00110 PE=4 SV=1)

HSP 1 Score: 1004 bits (2596), Expect = 0.0
Identity = 515/539 (95.55%), Postives = 522/539 (96.85%), Query Frame = 0


Query: 1   MPPRRGARRGGGRGGRGAGRGQPEAPPAAPAVDPNAPVTQADLAAMERRYQDMLQAALAP 60
           MPPRRG RRGGGRGGRGAGRGQPEAPP APAVDPNAPVTQADLAAME+RYQDMLQAALAP
Sbjct: 1   MPPRRGTRRGGGRGGRGAGRGQPEAPPVAPAVDPNAPVTQADLAAMEQRYQDMLQAALAP 60

Query: 61  FLAAQQNQAAQ--------QNQAAPAQAQAVVPPAPEEAPPVPVQLSAEAKHLRDFRKYN 120
           FLAAQQNQAA         Q QAAP QAQAV PPAPEEA PVPVQLS EAKHLRDFRKYN
Sbjct: 61  FLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQLSTEAKHLRDFRKYN 120

Query: 121 PKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGG 180
           PKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGG
Sbjct: 121 PKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGG 180

Query: 181 DVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVR 240
           DVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVR
Sbjct: 181 DVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVR 240

Query: 241 DEAARTEKFVRGLRLDIQGIVRALRPATHADALRIALDLSLPERADSSKAAGRGSALGQK 300
           DEAARTEKFVRGLRLD+QGIVRALRPATHADALRIALDLSLPERAD+SKAAGRGSALGQK
Sbjct: 241 DEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRGSALGQK 300

Query: 301 RKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCF 360
           RKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCF
Sbjct: 301 RKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCF 360

Query: 361 RCRQPGHTADVCPQKPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTGTLPILGHYAFV 420
           RCRQPGHTAD+CP+KPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTGTLPILGHYAFV
Sbjct: 361 RCRQPGHTADMCPRKPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTGTLPILGHYAFV 420

Query: 421 LFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDV 480
           LFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDV
Sbjct: 421 LFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDV 480

Query: 481 TLLVLDMQDFDVILGMDWLSANHANIDCFGKEVIFNPPSGASFKFRGAGMVCIPKVISA 531
           TLLVLDMQDFDVILGMDWLSANHANIDC+GKEV+FNPPS ASFKFRGAGMVCIPKVISA
Sbjct: 481 TLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKVISA 539

[Close]

BLAST of MELO.jh101245.1 vs. ExPASy TrEMBL
Match: A0A5D3BTN0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G001560 PE=4 SV=1)

HSP 1 Score: 1004 bits (2596), Expect = 0.0
Identity = 515/539 (95.55%), Postives = 522/539 (96.85%), Query Frame = 0


Query: 1   MPPRRGARRGGGRGGRGAGRGQPEAPPAAPAVDPNAPVTQADLAAMERRYQDMLQAALAP 60
           MPPRRG RRGGGRGGRGAGRGQPEAPP APAVDPNAPVTQADLAAME+RYQDMLQAALAP
Sbjct: 324 MPPRRGTRRGGGRGGRGAGRGQPEAPPVAPAVDPNAPVTQADLAAMEQRYQDMLQAALAP 383

Query: 61  FLAAQQNQAAQ--------QNQAAPAQAQAVVPPAPEEAPPVPVQLSAEAKHLRDFRKYN 120
           FLAAQQNQAA         Q QAAP QAQAV PPAPEEA PVPVQLS EAKHLRDFRKYN
Sbjct: 384 FLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQLSTEAKHLRDFRKYN 443

Query: 121 PKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGG 180
           PKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGG
Sbjct: 444 PKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGG 503

Query: 181 DVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVR 240
           DVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVR
Sbjct: 504 DVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVR 563

Query: 241 DEAARTEKFVRGLRLDIQGIVRALRPATHADALRIALDLSLPERADSSKAAGRGSALGQK 300
           DEAARTEKFVRGLRLD+QGIVRALRPATHADALRIALDLSLPERAD+SKAAGRGSALGQK
Sbjct: 564 DEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRGSALGQK 623

Query: 301 RKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCF 360
           RKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCF
Sbjct: 624 RKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCF 683

Query: 361 RCRQPGHTADVCPQKPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTGTLPILGHYAFV 420
           RCRQPGHTAD+CP+KPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTGTLPILGHYAFV
Sbjct: 684 RCRQPGHTADMCPRKPFETTPPQPSAAQQGRVFATTRQEAERAGTVVTGTLPILGHYAFV 743

Query: 421 LFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDV 480
           LFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDV
Sbjct: 744 LFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDV 803

Query: 481 TLLVLDMQDFDVILGMDWLSANHANIDCFGKEVIFNPPSGASFKFRGAGMVCIPKVISA 531
           TLLVLDMQDFDVILGMDWLSANHANIDC+GKEV+FNPPS ASFKFRGAGMVCIPKVISA
Sbjct: 804 TLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKVISA 862

The following BLAST results are available for this feature:

BLAST of MELO.jh101245.1 vs. NCBI nr


Match Name	Identity	Description
KAA0066365.1	97.18	pol protein [Cucumis melo var. makuwa]	[more]
KAA0025242.1	95.73	pol protein [Cucumis melo var. makuwa] >KAA0036610.1 pol protein [Cucumis melo v...	[more]
KAA0033825.1	95.55	pol protein [Cucumis melo var. makuwa]	[more]
TYK20443.1	95.55	pol protein [Cucumis melo var. makuwa]	[more]
TYK01576.1	95.55	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of MELO.jh101245.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO.jh101245.1 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A5A7VKS7	97.18	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21...	[more]
A0A5A7TSL0	95.73	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19...	[more]
A0A5D3CQB5	95.55	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]
A0A5A7UBS1	95.55	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13...	[more]
A0A5D3BTN0	95.55	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45...	[more]

BLAST of MELO.jh101245.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 350..366 e-value: 0.0041 score: 25.9
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 351..366 score: 9.1912
None	No IPR available	PFAM	PF08284	RVP_2	coord: 380..509 e-value: 2.7E-41 score: 140.6
None	No IPR available	GENE3D	4.10.60.10		coord: 346..387 e-value: 4.4E-5 score: 25.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 280..313
None	No IPR available	PANTHER	PTHR34482	DNA DAMAGE-INDUCIBLE PROTEIN 1-LIKE	coord: 115..365
None	No IPR available	PANTHER	PTHR34482:SF4	POLYMERASES SUPERFAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED	coord: 115..365
None	No IPR available	CDD	cd00303	retropepsin_like	coord: 427..491 e-value: 4.44659E-11 score: 57.3464
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 150..246 e-value: 7.2E-17 score: 61.5
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 388..516 e-value: 4.6E-21 score: 76.9
IPR021109	Aspartic peptidase domain superfamily	SUPERFAMILY	50630	Acid proteases	coord: 402..499
IPR001969	Aspartic peptidase, active site	PROSITE	PS00141	ASP_PROTEASE	coord: 412..423

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO.jh101245.1.t1	MELO.jh101245.1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding