MELO.jh101168.1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh101168.1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	DUF4218 domain-containing protein
Location	chr02: 11481286 .. 11481627 (-)
RNA-Seq Expression	MELO.jh101168.1
Synteny	MELO.jh101168.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTACACCTTGCCGTTCACTTAACATATGATAAAAAGATTACTGGCCTGGTTTCTTACAGTTGGATGTATTCGATTGAAAGAAGTCTACGCACGTTAAAGCAGTATGTTAGAAACAAAGCATGTCCTAAGGGGTCAATTGCAGAAGCCTACGTCAAGAATGAATCAAGCACCTTTTGTTCACGTTACCTACGTGGTATAGAGACTCGATTCACAAGAGATGAGCGACATGATGATACCATTGTAGAGGACGAGGTAATTGGTGACTTTGAAATTTTCAAGCAGAAAGTACGACCCTTAGGTGCACCAAAGGTTCGTGCTATATCACAGGAAGAGAAATGA

mRNA sequence

ATGGTACACCTTGCCGTTCACTTAACATATGATAAAAAGATTACTGGCCTGGTTTCTTACAGTTGGATGTATTCGATTGAAAGAAGTCTACGCACGTTAAAGCAGTATGTTAGAAACAAAGCATGTCCTAAGGGGTCAATTGCAGAAGCCTACGTCAAGAATGAATCAAGCACCTTTTGTTCACGTTACCTACGTGGTATAGAGACTCGATTCACAAGAGATGAGCGACATGATGATACCATTGTAGAGGACGAGGTAATTGGTGACTTTGAAATTTTCAAGCAGAAAGTACGACCCTTAGGTGCACCAAAGGTTCGTGCTATATCACAGGAAGAGAAATGA

Coding sequence (CDS)

ATGGTACACCTTGCCGTTCACTTAACATATGATAAAAAGATTACTGGCCTGGTTTCTTACAGTTGGATGTATTCGATTGAAAGAAGTCTACGCACGTTAAAGCAGTATGTTAGAAACAAAGCATGTCCTAAGGGGTCAATTGCAGAAGCCTACGTCAAGAATGAATCAAGCACCTTTTGTTCACGTTACCTACGTGGTATAGAGACTCGATTCACAAGAGATGAGCGACATGATGATACCATTGTAGAGGACGAGGTAATTGGTGACTTTGAAATTTTCAAGCAGAAAGTACGACCCTTAGGTGCACCAAAGGTTCGTGCTATATCACAGGAAGAGAAATGA

Protein sequence

MVHLAVHLTYDKKITGLVSYSWMYSIERSLRTLKQYVRNKACPKGSIAEAYVKNESSTFCSRYLRGIETRFTRDERHDDTIVEDEVIGDFEIFKQKVRPLGAPKVRAISQEEK

Homology

[Close]

BLAST of MELO.jh101168.1 vs. NCBI nr
Match: KAA0037141.1 (uncharacterized protein E6C27_scaffold379G00490 [Cucumis melo var. makuwa] >TYK13934.1 uncharacterized protein E5676_scaffold832G001330 [Cucumis melo var. makuwa])

HSP 1 Score: 197 bits (501), Expect = 6.39e-58
Identity = 99/113 (87.61%), Postives = 104/113 (92.04%), Query Frame = 0


Query: 1   MVHLAVHLTYDKKITGLVSYSWMYSIERSLRTLKQYVRNKACPKGSIAEAYVKNESSTFC 60
           MVHLAVHL Y+ KITG +SYSWMY IERSLRTLKQYVRNKA P GSIAEAYV NESSTFC
Sbjct: 193 MVHLAVHLPYEMKITGPISYSWMYPIERSLRTLKQYVRNKAHPGGSIAEAYVMNESSTFC 252

Query: 61  SRYLRGIETRFTRDERHDDTIVEDEVIGDFEIFKQKVRPLGAPKVRAISQEEK 113
           SRYLRGIETRFTRDER+DDTIVE+EVIGDFEIFKQKVRPLGA  VRAIS+EEK
Sbjct: 253 SRYLRGIETRFTRDERNDDTIVENEVIGDFEIFKQKVRPLGASSVRAISEEEK 305

[Close]

BLAST of MELO.jh101168.1 vs. NCBI nr
Match: KAA0056541.1 (uncharacterized protein E6C27_scaffold288G00410 [Cucumis melo var. makuwa])

HSP 1 Score: 195 bits (496), Expect = 4.18e-57
Identity = 99/113 (87.61%), Postives = 103/113 (91.15%), Query Frame = 0


Query: 1   MVHLAVHLTYDKKITGLVSYSWMYSIERSLRTLKQYVRNKACPKGSIAEAYVKNESSTFC 60
           MVHLAVHL Y+ KITG VSYSWMY IERSLRTLKQYVRNKA P+GSIAE YV NESSTFC
Sbjct: 173 MVHLAVHLPYETKITGPVSYSWMYPIERSLRTLKQYVRNKARPEGSIAEGYVMNESSTFC 232

Query: 61  SRYLRGIETRFTRDERHDDTIVEDEVIGDFEIFKQKVRPLGAPKVRAISQEEK 113
           SRYL GIETRFTRDER+DDTIVE+EVIGDFEIFKQKVRPLGA  VRAISQEEK
Sbjct: 233 SRYLCGIETRFTRDERNDDTIVENEVIGDFEIFKQKVRPLGASSVRAISQEEK 285

[Close]

BLAST of MELO.jh101168.1 vs. NCBI nr
Match: KAA0066434.1 (uncharacterized protein E6C27_scaffold21G005260 [Cucumis melo var. makuwa])

HSP 1 Score: 197 bits (500), Expect = 2.62e-56
Identity = 98/113 (86.73%), Postives = 104/113 (92.04%), Query Frame = 0


Query: 1   MVHLAVHLTYDKKITGLVSYSWMYSIERSLRTLKQYVRNKACPKGSIAEAYVKNESSTFC 60
           MVHLA+HL Y+ KITG VSYSWMY IERSLRTLKQYVRNKA P+GSIAE YV NESSTFC
Sbjct: 479 MVHLAIHLPYETKITGPVSYSWMYPIERSLRTLKQYVRNKARPEGSIAEGYVMNESSTFC 538

Query: 61  SRYLRGIETRFTRDERHDDTIVEDEVIGDFEIFKQKVRPLGAPKVRAISQEEK 113
           SRYLRGIETRFTRDER+DDTIVE+EVIGDFEIFKQKVRPLGA  VRAIS+EEK
Sbjct: 539 SRYLRGIETRFTRDERNDDTIVENEVIGDFEIFKQKVRPLGASSVRAISEEEK 591

[Close]

BLAST of MELO.jh101168.1 vs. NCBI nr
Match: KAA0041901.1 (uncharacterized protein E6C27_scaffold67G003060 [Cucumis melo var. makuwa])

HSP 1 Score: 196 bits (499), Expect = 3.70e-56
Identity = 99/113 (87.61%), Postives = 104/113 (92.04%), Query Frame = 0


Query: 1   MVHLAVHLTYDKKITGLVSYSWMYSIERSLRTLKQYVRNKACPKGSIAEAYVKNESSTFC 60
           MVHLAVHL Y+ KITG VSYSWMY IERSLRTLKQYVRNKA P+GSIAE YV NESSTFC
Sbjct: 413 MVHLAVHLPYETKITGPVSYSWMYPIERSLRTLKQYVRNKARPEGSIAEGYVMNESSTFC 472

Query: 61  SRYLRGIETRFTRDERHDDTIVEDEVIGDFEIFKQKVRPLGAPKVRAISQEEK 113
           SRYLRGIETRFTRDER+DDTIVE+EVIGDFEIFKQKVRPLGA  VRAIS+EEK
Sbjct: 473 SRYLRGIETRFTRDERNDDTIVENEVIGDFEIFKQKVRPLGALSVRAISEEEK 525

[Close]

BLAST of MELO.jh101168.1 vs. NCBI nr
Match: KAA0026159.1 (uncharacterized protein E6C27_scaffold19G001130 [Cucumis melo var. makuwa])

HSP 1 Score: 193 bits (491), Expect = 5.31e-56
Identity = 97/113 (85.84%), Postives = 103/113 (91.15%), Query Frame = 0


Query: 1   MVHLAVHLTYDKKITGLVSYSWMYSIERSLRTLKQYVRNKACPKGSIAEAYVKNESSTFC 60
           MVHLAVHL Y+ KITG VSYSWMY IERSLRTLK+YVRNKA P+GSIAE YV NESSTFC
Sbjct: 448 MVHLAVHLPYETKITGPVSYSWMYPIERSLRTLKRYVRNKARPEGSIAEGYVMNESSTFC 507

Query: 61  SRYLRGIETRFTRDERHDDTIVEDEVIGDFEIFKQKVRPLGAPKVRAISQEEK 113
           SRYLRGIETRF RDER+DDTIVE+EVIGDFEIFKQKVRPLGA  VRAIS+EEK
Sbjct: 508 SRYLRGIETRFIRDERNDDTIVENEVIGDFEIFKQKVRPLGASSVRAISEEEK 560

[Close]

BLAST of MELO.jh101168.1 vs. ExPASy TrEMBL
Match: A0A5A7T6B9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold832G001330 PE=4 SV=1)

HSP 1 Score: 197 bits (501), Expect = 3.10e-58
Identity = 99/113 (87.61%), Postives = 104/113 (92.04%), Query Frame = 0


Query: 1   MVHLAVHLTYDKKITGLVSYSWMYSIERSLRTLKQYVRNKACPKGSIAEAYVKNESSTFC 60
           MVHLAVHL Y+ KITG +SYSWMY IERSLRTLKQYVRNKA P GSIAEAYV NESSTFC
Sbjct: 193 MVHLAVHLPYEMKITGPISYSWMYPIERSLRTLKQYVRNKAHPGGSIAEAYVMNESSTFC 252

Query: 61  SRYLRGIETRFTRDERHDDTIVEDEVIGDFEIFKQKVRPLGAPKVRAISQEEK 113
           SRYLRGIETRFTRDER+DDTIVE+EVIGDFEIFKQKVRPLGA  VRAIS+EEK
Sbjct: 253 SRYLRGIETRFTRDERNDDTIVENEVIGDFEIFKQKVRPLGASSVRAISEEEK 305

[Close]

BLAST of MELO.jh101168.1 vs. ExPASy TrEMBL
Match: A0A5A7USS7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G00410 PE=4 SV=1)

HSP 1 Score: 195 bits (496), Expect = 2.02e-57
Identity = 99/113 (87.61%), Postives = 103/113 (91.15%), Query Frame = 0


Query: 1   MVHLAVHLTYDKKITGLVSYSWMYSIERSLRTLKQYVRNKACPKGSIAEAYVKNESSTFC 60
           MVHLAVHL Y+ KITG VSYSWMY IERSLRTLKQYVRNKA P+GSIAE YV NESSTFC
Sbjct: 173 MVHLAVHLPYETKITGPVSYSWMYPIERSLRTLKQYVRNKARPEGSIAEGYVMNESSTFC 232

Query: 61  SRYLRGIETRFTRDERHDDTIVEDEVIGDFEIFKQKVRPLGAPKVRAISQEEK 113
           SRYL GIETRFTRDER+DDTIVE+EVIGDFEIFKQKVRPLGA  VRAISQEEK
Sbjct: 233 SRYLCGIETRFTRDERNDDTIVENEVIGDFEIFKQKVRPLGASSVRAISQEEK 285

[Close]

BLAST of MELO.jh101168.1 vs. ExPASy TrEMBL
Match: A0A5A7VGJ9 (DUF4218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G005260 PE=4 SV=1)

HSP 1 Score: 197 bits (500), Expect = 1.27e-56
Identity = 98/113 (86.73%), Postives = 104/113 (92.04%), Query Frame = 0


Query: 1   MVHLAVHLTYDKKITGLVSYSWMYSIERSLRTLKQYVRNKACPKGSIAEAYVKNESSTFC 60
           MVHLA+HL Y+ KITG VSYSWMY IERSLRTLKQYVRNKA P+GSIAE YV NESSTFC
Sbjct: 479 MVHLAIHLPYETKITGPVSYSWMYPIERSLRTLKQYVRNKARPEGSIAEGYVMNESSTFC 538

Query: 61  SRYLRGIETRFTRDERHDDTIVEDEVIGDFEIFKQKVRPLGAPKVRAISQEEK 113
           SRYLRGIETRFTRDER+DDTIVE+EVIGDFEIFKQKVRPLGA  VRAIS+EEK
Sbjct: 539 SRYLRGIETRFTRDERNDDTIVENEVIGDFEIFKQKVRPLGASSVRAISEEEK 591

[Close]

BLAST of MELO.jh101168.1 vs. ExPASy TrEMBL
Match: A0A5A7TK16 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G003060 PE=4 SV=1)

HSP 1 Score: 196 bits (499), Expect = 1.79e-56
Identity = 99/113 (87.61%), Postives = 104/113 (92.04%), Query Frame = 0


Query: 1   MVHLAVHLTYDKKITGLVSYSWMYSIERSLRTLKQYVRNKACPKGSIAEAYVKNESSTFC 60
           MVHLAVHL Y+ KITG VSYSWMY IERSLRTLKQYVRNKA P+GSIAE YV NESSTFC
Sbjct: 413 MVHLAVHLPYETKITGPVSYSWMYPIERSLRTLKQYVRNKARPEGSIAEGYVMNESSTFC 472

Query: 61  SRYLRGIETRFTRDERHDDTIVEDEVIGDFEIFKQKVRPLGAPKVRAISQEEK 113
           SRYLRGIETRFTRDER+DDTIVE+EVIGDFEIFKQKVRPLGA  VRAIS+EEK
Sbjct: 473 SRYLRGIETRFTRDERNDDTIVENEVIGDFEIFKQKVRPLGALSVRAISEEEK 525

[Close]

BLAST of MELO.jh101168.1 vs. ExPASy TrEMBL
Match: A0A5A7SLL4 (DUF4218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G001130 PE=4 SV=1)

HSP 1 Score: 193 bits (491), Expect = 2.57e-56
Identity = 97/113 (85.84%), Postives = 103/113 (91.15%), Query Frame = 0


Query: 1   MVHLAVHLTYDKKITGLVSYSWMYSIERSLRTLKQYVRNKACPKGSIAEAYVKNESSTFC 60
           MVHLAVHL Y+ KITG VSYSWMY IERSLRTLK+YVRNKA P+GSIAE YV NESSTFC
Sbjct: 448 MVHLAVHLPYETKITGPVSYSWMYPIERSLRTLKRYVRNKARPEGSIAEGYVMNESSTFC 507

Query: 61  SRYLRGIETRFTRDERHDDTIVEDEVIGDFEIFKQKVRPLGAPKVRAISQEEK 113
           SRYLRGIETRF RDER+DDTIVE+EVIGDFEIFKQKVRPLGA  VRAIS+EEK
Sbjct: 508 SRYLRGIETRFIRDERNDDTIVENEVIGDFEIFKQKVRPLGASSVRAISEEEK 560

The following BLAST results are available for this feature:

BLAST of MELO.jh101168.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0037141.1	6.39e-58	87.61	uncharacterized protein E6C27_scaffold379G00490 [Cucumis melo var. makuwa] >TYK1...	[more]
KAA0056541.1	4.18e-57	87.61	uncharacterized protein E6C27_scaffold288G00410 [Cucumis melo var. makuwa]	[more]
KAA0066434.1	2.62e-56	86.73	uncharacterized protein E6C27_scaffold21G005260 [Cucumis melo var. makuwa]	[more]
KAA0041901.1	3.70e-56	87.61	uncharacterized protein E6C27_scaffold67G003060 [Cucumis melo var. makuwa]	[more]
KAA0026159.1	5.31e-56	85.84	uncharacterized protein E6C27_scaffold19G001130 [Cucumis melo var. makuwa]	[more]

BLAST of MELO.jh101168.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO.jh101168.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T6B9	3.10e-58	87.61	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7USS7	2.02e-57	87.61	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7VGJ9	1.27e-56	86.73	DUF4218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7TK16	1.79e-56	87.61	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7SLL4	2.57e-56	85.84	DUF4218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]

BLAST of MELO.jh101168.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025452	Domain of unknown function DUF4218	PFAM	PF13960	DUF4218	coord: 1..77 e-value: 2.2E-30 score: 104.7

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO.jh101168.1.t1	MELO.jh101168.1.t1	mRNA