MELO.jh101001.1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh101001.1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Reverse transcriptase
Location	chr01: 16022090 .. 16025465 (+)
RNA-Seq Expression	MELO.jh101001.1
Synteny	MELO.jh101001.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGTTTTAAGCAGAGTCGACAGATACAGGTACAGAAAAGCGTTGTTCGTCGGTTTCACGCCATCTTTTGGTCTAAGGTAGGAGGTAGTCCGGGGGGGTGTGACACAATGATATTCCTAAGACTGCGTTTTGCTCCAGATACGGGAATTACGAGTTCATTGTGATGTCCTTTGGTTTGACTAATGCTCCTGCAGTATTTATGGACTTGATAAACAGAGTGTTTAAGGATTTATTAGACACGTTTGTTATAGTCTTCATTGATGATATCTTGGTTTACTCCAAGGCAGAGGTCGAGCATGAGGATCACTTGCATCAAGTTTTGGGGACTCTTCGAGCTAATAAGCTGTATGCCAAGTTTTTCAAGTGTGAGTTCTGGCTGAAGATGGTATCTTTTCTTGGACATGTAGTGTCCAGTGAGGGAGTTTCTGTAGACCCAACAAAGATTGAAGCTGTTACTAGTTGGCCACAGTCATCTACAGTCAGTGAGATTCGTAGCTTTATGGGTTTAACAGGTTATTATAAGAGGTTCATGGAAGACTTTTCTCGCATAGCTAGTCCCATTTGTTTAGTTGACCAGTTGACCAAAAAGGGGACTCCATTTGTTTAAGACCTAGCATGTGAGTCTAGTTTCCAGGAGCTCAAGCAGAAGCTTGTGTCTGCCCAGTTCTGACAGTACCAGATGGATCTGAAAGTTTCATGATCTACAGTGATGCCTCAAAGAAAGGACTGGGCTATGTTCTGATGCAGAAAGGTAAGGTAGTTGCTTATGCCTCCCGTCAGTTGAAGCGTCATGAGCAGAACTACCCTACCCATGACCTAGAGTTGGAAATAGTGGTTTTTGCACTGAAGATATGGAGGCACTACCTGTACGATGAGAAGATACAGATTTTCACTGACCATAAGAGTCTGAAGTACTTCTTCACCCAGAAGGAGTTGAACATGAGGTAGAGGAGGTGGTTTGAGTTAGTGAAAGACTATGATTGCGAGATTTTGTATCACCCAGGTAAGGAAAACGTAGTAGCTGACGCGTTGAGTAGGAAGGTTGCGCATTCAGCAGCGCTCATCACCAAGCAAGCTCCCTTACTAAGAGATCTCGAGAGAGCTGAGATTGCAGTCTCAGTAGGGGAAGTGACCTCACAGTTGGCTCAGTTGACCGTGCAGCCGACCTTGAGACAGAGGCTTATTGTTGCTCAGCTAATTGATCCTTATGTGGTCGAGAAGCGTCTATTAGTAGAGGCAGGGCAAAGTGAGGATTTCTCCATATCCTCAGATGACGAACTTACTTTCGATCGGCGTTTGTGCGTGCCATAAGACAGTGCAGTCAAGGCAGAGCTTTTGACTGAGGCACACAGTTCCCCATTTACTATGCACCCCGGAAGTATGAAGATGTACCAAGACTTGAGGCGTGCTTATTGGTAGAGGAACACGAAGAAAGAAGTGGCAGACTTCGTCAATAGATGTTTGGTGTGCCAGCAGGTGAAGGCACCTAGACAGAAGCCAACAGGGTTGTTGTAACCCTTGGGTGTACTAGAATGGAAATGGGAGAGTGTATCGATGGACTTCATTACAGGACTGCCCAGAACTCTAAAGGGCTATACAGTGATCTGGGTTGTTATCGACAAATCTGGGTTGTTGTCAACAGACTCACAAAATCAGCCCATTTCATTCCAGGGAAGTCCACTTACACTGCCAGTAAGTGGGGACAGTCATATATGACGATGATAGTGAGACTGCATGGAGTACCCGTATCCATCATTTCAGACAGAGATGCTCGTTTCACATCGAAGTTCTGGAAAGGACTTCAGCTAGCCTTGGACACAAGGTTAGACTTCAGTACAGCTTTCCACCCTCAGATTGACGGTCAAACAAAGAGGTTGAACCAGGTTTTGGAAGATATGTTGCGAGCCTATGTTCTGGAGTTCTCAGGGAGTTGGGACTCTCACTTCCACTTGATGGAATTCGCTTATAATAACAGCTACCAGGCTACCATCGGCATGGCACAATTTGAGGCTCTGTATGGTAAGTGTTGCAGATCTTCTGTTTGTTGTGGTTGAGGTTGGTGAGCAGAGAATGCTAGGCCCCGAGTTAGTTCAGACCACCAACGTAGCCATACAGAAGATTAGAGCTCGTATGTTGACAGCACAGAGTAGACAGAAGAGTTATGTTGATGAACGACGTAAGGATCTCAAGTTTGAGGTGGAAGACATGGTCTTTCTGAAGGTAGCACCTATGAAAGGTGTTCTGAGGTTCGAGAAGAAGGGGAAGCTAAGTCCGCGTTTTCTAGGGCCATTTGAGATACTGGAGCGGATTGGCCCTATAGCTTATCGCTTGGCGTTGCCTCCATCATTTTCTGCAGTGCATGACGTATTTCATGTCTCCATGTTGAGGAGGTATATCGCAGACTCGACGCATGTAGTTGACTTCGAGCCATTGCAAATTAATGAGGACTTGAGCTACTAGGAGCAACCGATTGAGATTTTAGCAAGAGAGGTTAAGATGCTCCATAATCGAGGAATCTCACTGGTCAAAGTTCTTTGGCGAAACCACGGAGTTGAAGAGGCCACATGGGAGAGAGAAGAGGACATGAGAGCCCAGTACCCCGAGCTGTTCGAGGACTAGAACTTTTGATGATGAAAGTTTTTCAAGGAGGGAAGATTGTAACGCCCCAAGATTTGTAATTTAATTTATTATCTTAAGTGTAGTCATTTTAATTTTGGGAAAAAGATTGAGTTGATTTGTTGGTTTTGATTTTTATGGAGATTGTTGGGTTTAAACAAGAACGAGATTAAGTGGATTTAGTTAATTAAATTAGGGAAAGAGAAAAGAAGAATAATAATAAGCTTATTATTATTATTTTTCTCTTTAAAAGGACCATTGGGACTCGTGCAAACCACCATCCCCTTCATTGTGAAAGGAAAAAAAAAAAAAAAAACCCTAGCCGCCACTCCTTGTAGTCGCGGTGAGCCCGAGGAGCAAACGCCCGTTGACCCGCTCTTTCGGTAGCCGTCCTCTGCAAATCGGCGCCCGACCCGCGTTTCCTCCGCTTGGAAGGCATCACCGCTACCGCGTCTGCGGCAATCTCCTCCCTTATCGCATTCTTGCTCGTCGATCGTACATCCAACCATCGTTGCGTCGGCGACCATCGATCGCGCGTCCCGATTGCCGTCGCGTCGCTACCCGTCGATCGCGCGTCCAGCCGTCGTCGCATCGCCGCCACGACTGCGCATCCGCCGTCGCATCGCCACCGAGCCGCGCTCGCGTCCAGCCGCATTACGTCACCGCCCGACCTGCACCTGCGCCTGCGTCCTTCTTCGTGAGCCAAATTCCAACCGAGCCAGCTGAGCCGCCAAGCTCCCTTTTAGCCCTTTTTTGA

mRNA sequence

ATGAAAGTTTTAAGCAGAGTCGACAGATACAGATACGGGAATTACGAGTTCATTGTGATGTCCTTTGGTTTGACTAATGCTCCTGCAGTATTTATGGACTTGATAAACAGAGTGTTTAAGGATTTATTAGACACGTTTGTTATAGTCTTCATTGATGATATCTTGGTTTACTCCAAGGCAGAGGTCGAGCATGAGGATCACTTGCATCAAGTTTTGGGGACTCTTCGAGCTAATAAGCTGTATGCCAAGTTTTTCAAGTGTGAGTTCTGGCTGAAGATGGTATCTTTTCTTGGACATGTAGTGTCCAGTGAGGGAGTTTCTGTAGACCCAACAAAGATTGAAGCTGTTACTAGTTGGCCACAGTCATCTACAGTCAGTGAGATTCGTAGCTTTATGGGTTTAACAGGAGCTCAAGCAGAAGCTTGTGTCTGCCCAGTTCTGACAGTACCAGATGGATCTGAAAGTTTCATGATCTACAGTGATGCCTCAAAGAAAGGACTGGGCTATGTTCTGATGCAGAAAGGTAAGGTAGTTGCTTATGCCTCCCGTCAGTTGAAGCGTCATGAGCAGAACTACCCTACCCATGACCTAGAGTTGGAAATAGTGGTTTTTGCACTGAAGATATGGAGGCACTACCTGTACGATGAGAAGATACAGATTTTCACTGACCATAAGAGTCTGAAGTACTTCTTCACCCAGAAGGAGTTGAACATGAGGAAGGTTGCGCATTCAGCAGCGCTCATCACCAAGCAAGCTCCCTTACTAAGAGATCTCGAGAGAGCTGAGATTGCAGTCTCAGTAGGGGAAGTGACCTCACAGTTGGCTCAGTTGACCGTGCAGCCGACCTTGAGACAGAGGCTTATTGTTGCTCAGCTAATTGATCCTTATGTGGTCGAGAAGCGTCTATTAGTAGAGGCAGGGCAAAGTGAGGATTTCTCCATATCCTCAGATGACGAACTTACTTTCGATCGGCGTTTGACTGCCCAGAACTCTAAAGGGCTATACAGTGATCTGGGTTGTTATCGACAAATCTGGGTTGTTGTCAACAGACTCACAAAATCAGCCCATTTCATTCCAGGGAAGTCCACTTACACTGCCAGTAAGTGGGGACAGTCATATATGACGATGATAGTGAGACTGCATGGAGTACCCGTATCCATCATTTCAGACAGAGATGCTCGTTTCACATCGAAGTTCTGGAAAGGACTTCAGCTAGCCTTGGACACAAGGTTAGACTTCAGTACAGCTTTCCACCCTCAGATTGACGGTCAAACAAAGAGGTTGAACCAGGTTTTGGAAGATATGTTGCGAGCCTATGTTCTGGAGTTCTCAGGGAGTTGGGACTCTCACTTCCACTTGATGGAATTCGCTTATAATAACAGCTACCAGGCTACCATCGGCATGGCACAATTTGAGGCTCTGTATGGCCCCGAGTTAGTTCAGACCACCAACGTAGCCATACAGAAGATTAGAGCTCGTATGTTGACAGCACAGAGTAGACAGAAGAGTTATGTTGATGAACGACGTAAGGATCTCAAGTTTGAGGTGGAAGACATGGTCTTTCTGAAGGTAGCACCTATGAAAGGTGTTCTGAGGTTCGAGAAGAAGGGGAAGCTAAGTCCGCGTTTTCTAGGGCCATTTGAGATACTGGAGCGGATTGGCCCTATAGCTTATCGCTTGGCGTTGCCTCCATCATTTTCTGCAGTGCATGACGTATTTCATGTCTCCATGTTGAGGAGGTATATCGCAGACTCGACGCATCCGCCACTCCTTGTAGTCGCGGTGAGCCCGAGGAGCAAACGCCCGTTGACCCGCTCTTTCGGTAGCCGTCCTCTGCAAATCGGCGCCCGACCCGCGTTTCCTCCGCTTGGAAGGCATCACCGCTACCGCGTCTGCGGCAATCTCCTCCCTTATCGCATTCTTGCTCGTCGATCGTACATCCAACCATCGTTGCGTCGGCGACCATCGATCGCGCGTCCCGATTGCCGTCGCGTCGCTACCCGTCGATCGCGCGTCCAGCCGTCGTCGCATCGCCGCCACGACTGCGCATCCGCCGTCGCATCGCCACCGAGCCGCGCTCGCGTCCAGCCGCATTACGTCACCGCCCGACCTGCACCTGCGCCTGCGTCCTTCTTCGTGAGCCAAATTCCAACCGAGCCAGCTGAGCCGCCAAGCTCCCTTTTAGCCCTTTTTTGA

Coding sequence (CDS)

ATGAAAGTTTTAAGCAGAGTCGACAGATACAGATACGGGAATTACGAGTTCATTGTGATGTCCTTTGGTTTGACTAATGCTCCTGCAGTATTTATGGACTTGATAAACAGAGTGTTTAAGGATTTATTAGACACGTTTGTTATAGTCTTCATTGATGATATCTTGGTTTACTCCAAGGCAGAGGTCGAGCATGAGGATCACTTGCATCAAGTTTTGGGGACTCTTCGAGCTAATAAGCTGTATGCCAAGTTTTTCAAGTGTGAGTTCTGGCTGAAGATGGTATCTTTTCTTGGACATGTAGTGTCCAGTGAGGGAGTTTCTGTAGACCCAACAAAGATTGAAGCTGTTACTAGTTGGCCACAGTCATCTACAGTCAGTGAGATTCGTAGCTTTATGGGTTTAACAGGAGCTCAAGCAGAAGCTTGTGTCTGCCCAGTTCTGACAGTACCAGATGGATCTGAAAGTTTCATGATCTACAGTGATGCCTCAAAGAAAGGACTGGGCTATGTTCTGATGCAGAAAGGTAAGGTAGTTGCTTATGCCTCCCGTCAGTTGAAGCGTCATGAGCAGAACTACCCTACCCATGACCTAGAGTTGGAAATAGTGGTTTTTGCACTGAAGATATGGAGGCACTACCTGTACGATGAGAAGATACAGATTTTCACTGACCATAAGAGTCTGAAGTACTTCTTCACCCAGAAGGAGTTGAACATGAGGAAGGTTGCGCATTCAGCAGCGCTCATCACCAAGCAAGCTCCCTTACTAAGAGATCTCGAGAGAGCTGAGATTGCAGTCTCAGTAGGGGAAGTGACCTCACAGTTGGCTCAGTTGACCGTGCAGCCGACCTTGAGACAGAGGCTTATTGTTGCTCAGCTAATTGATCCTTATGTGGTCGAGAAGCGTCTATTAGTAGAGGCAGGGCAAAGTGAGGATTTCTCCATATCCTCAGATGACGAACTTACTTTCGATCGGCGTTTGACTGCCCAGAACTCTAAAGGGCTATACAGTGATCTGGGTTGTTATCGACAAATCTGGGTTGTTGTCAACAGACTCACAAAATCAGCCCATTTCATTCCAGGGAAGTCCACTTACACTGCCAGTAAGTGGGGACAGTCATATATGACGATGATAGTGAGACTGCATGGAGTACCCGTATCCATCATTTCAGACAGAGATGCTCGTTTCACATCGAAGTTCTGGAAAGGACTTCAGCTAGCCTTGGACACAAGGTTAGACTTCAGTACAGCTTTCCACCCTCAGATTGACGGTCAAACAAAGAGGTTGAACCAGGTTTTGGAAGATATGTTGCGAGCCTATGTTCTGGAGTTCTCAGGGAGTTGGGACTCTCACTTCCACTTGATGGAATTCGCTTATAATAACAGCTACCAGGCTACCATCGGCATGGCACAATTTGAGGCTCTGTATGGCCCCGAGTTAGTTCAGACCACCAACGTAGCCATACAGAAGATTAGAGCTCGTATGTTGACAGCACAGAGTAGACAGAAGAGTTATGTTGATGAACGACGTAAGGATCTCAAGTTTGAGGTGGAAGACATGGTCTTTCTGAAGGTAGCACCTATGAAAGGTGTTCTGAGGTTCGAGAAGAAGGGGAAGCTAAGTCCGCGTTTTCTAGGGCCATTTGAGATACTGGAGCGGATTGGCCCTATAGCTTATCGCTTGGCGTTGCCTCCATCATTTTCTGCAGTGCATGACGTATTTCATGTCTCCATGTTGAGGAGGTATATCGCAGACTCGACGCATCCGCCACTCCTTGTAGTCGCGGTGAGCCCGAGGAGCAAACGCCCGTTGACCCGCTCTTTCGGTAGCCGTCCTCTGCAAATCGGCGCCCGACCCGCGTTTCCTCCGCTTGGAAGGCATCACCGCTACCGCGTCTGCGGCAATCTCCTCCCTTATCGCATTCTTGCTCGTCGATCGTACATCCAACCATCGTTGCGTCGGCGACCATCGATCGCGCGTCCCGATTGCCGTCGCGTCGCTACCCGTCGATCGCGCGTCCAGCCGTCGTCGCATCGCCGCCACGACTGCGCATCCGCCGTCGCATCGCCACCGAGCCGCGCTCGCGTCCAGCCGCATTACGTCACCGCCCGACCTGCACCTGCGCCTGCGTCCTTCTTCGTGAGCCAAATTCCAACCGAGCCAGCTGAGCCGCCAAGCTCCCTTTTAGCCCTTTTTTGA

Protein sequence

MKVLSRVDRYRYGNYEFIVMSFGLTNAPAVFMDLINRVFKDLLDTFVIVFIDDILVYSKAEVEHEDHLHQVLGTLRANKLYAKFFKCEFWLKMVSFLGHVVSSEGVSVDPTKIEAVTSWPQSSTVSEIRSFMGLTGAQAEACVCPVLTVPDGSESFMIYSDASKKGLGYVLMQKGKVVAYASRQLKRHEQNYPTHDLELEIVVFALKIWRHYLYDEKIQIFTDHKSLKYFFTQKELNMRKVAHSAALITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLRQRLIVAQLIDPYVVEKRLLVEAGQSEDFSISSDDELTFDRRLTAQNSKGLYSDLGCYRQIWVVVNRLTKSAHFIPGKSTYTASKWGQSYMTMIVRLHGVPVSIISDRDARFTSKFWKGLQLALDTRLDFSTAFHPQIDGQTKRLNQVLEDMLRAYVLEFSGSWDSHFHLMEFAYNNSYQATIGMAQFEALYGPELVQTTNVAIQKIRARMLTAQSRQKSYVDERRKDLKFEVEDMVFLKVAPMKGVLRFEKKGKLSPRFLGPFEILERIGPIAYRLALPPSFSAVHDVFHVSMLRRYIADSTHPPLLVVAVSPRSKRPLTRSFGSRPLQIGARPAFPPLGRHHRYRVCGNLLPYRILARRSYIQPSLRRRPSIARPDCRRVATRRSRVQPSSHRRHDCASAVASPPSRARVQPHYVTARPAPAPASFFVSQIPTEPAEPPSSLLALF

Homology

[Close]

BLAST of MELO.jh101001.1 vs. NCBI nr
Match: KAA0045309.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 875 bits (2261), Expect = 5.71e-306
Identity = 486/751 (64.71%), Postives = 523/751 (69.64%), Query Frame = 0


Query: 9   RYRYGNYEFIVMSFGLTNAPAVFMDLINRVFKDLLDTFVIVFIDDILVYSKAEVEHEDHL 68
           R RYG+YEF+V+SFGLTNAPAVFMDL+NRVFKD LD+FVIVFIDDIL+YSK E EHE+HL
Sbjct: 240 RSRYGHYEFVVISFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHL 299

Query: 69  HQVLGTLRANKLYAKFFKCEFWLKMVSFLGHVVSSEGVSVDPTKIEAVTSWPQSSTVSEI 128
           HQVL TLRANKLYAKF KCEFWL+ V+FLGHVVSSEGVSVDP KIEAVT+WP+ STVSEI
Sbjct: 300 HQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEI 359

Query: 129 RSFMGLTG--------------------------AQAEACVC------------PVLTVP 188
           RSF+GL G                            + AC C            PVLTVP
Sbjct: 360 RSFLGLAGYYRRFVEDLSRIASPLTQLTRKGTPFVWSPACECSFQELKQKLVTAPVLTVP 419

Query: 189 DGSESFMIYSDASKKGLGYVLMQKGKVVAYASRQLKRHEQNYPTHDLELEIVVFALKIWR 248
           DGS +F+IYSDASKKGLG VLMQ+GKVVAYASRQLK HEQNYPTHDLEL  VVFALKIWR
Sbjct: 420 DGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWR 479

Query: 249 HYLYDEKIQIFTDHKSLKYFFTQKELNMR------------------------------- 308
           HYLY EKIQI+TDHKSLKYFFTQKELNMR                               
Sbjct: 480 HYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADSLSR 539

Query: 309 KVAHSAALITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLRQRLIVAQLIDPYVVE 368
           KVAHSAALITKQ PLLRD ERAEIAVSVGEVT+QLAQL+VQPTLRQ++I AQL DPY+ E
Sbjct: 540 KVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAE 599

Query: 369 KRLLVEAGQSEDFSISSDDELTFDRRLTAQN----------------------SKGLYSD 428
           KR +VE GQ EDFSISSDD L F+ RL                          S  +Y D
Sbjct: 600 KRRMVETGQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQD 659

Query: 429 LGC--------------------------------------------------------- 488
           L                                                           
Sbjct: 660 LRSVYWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLP 719

Query: 489 -----YRQIWVVVNRLTKSAHFIPGKSTYTASKWGQSYMTMIVRLHGVPVSIISDRDARF 548
                Y  IWVVV+RLTKSAHF+PGKSTYTASKWGQ Y+T IVRLHGVPVSIISDRDARF
Sbjct: 720 KTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYVTEIVRLHGVPVSIISDRDARF 779

Query: 549 TSKFWKGLQLALDTRLDFSTAFHPQIDGQTKRLNQVLEDMLRAYVLEFSGSWDSHFHLME 587
           TSKFWKGLQLAL TRLDFSTAFHPQ DGQT+RLNQ+LEDMLRA VLEFSGSWDSH HLME
Sbjct: 780 TSKFWKGLQLALCTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLME 839

[Close]

BLAST of MELO.jh101001.1 vs. NCBI nr
Match: KAA0056636.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 866 bits (2238), Expect = 4.22e-305
Identity = 481/751 (64.05%), Postives = 517/751 (68.84%), Query Frame = 0


Query: 9   RYRYGNYEFIVMSFGLTNAPAVFMDLINRVFKDLLDTFVIVFIDDILVYSKAEVEHEDHL 68
           R RYG+YEF+VMSFGLTNAPAVFMDL+NRVFKD LD+FVIVFIDDIL+YSK E EHE+HL
Sbjct: 62  RSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHL 121

Query: 69  HQVLGTLRANKLYAKFFKCEFWLKMVSFLGHVVSSEGVSVDPTKIEAVTSWPQSSTVSEI 128
           HQVL TLRANKLYAKF KCEFWL+ V+FLGHVVSSEGVSVDP K EAVT+WP+ STVSEI
Sbjct: 122 HQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKTEAVTNWPRPSTVSEI 181

Query: 129 RSFMGLTG--------------------------AQAEAC------------VCPVLTVP 188
           RSF+GL G                            + AC              PVLTVP
Sbjct: 182 RSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQKLKQKLVTAPVLTVP 241

Query: 189 DGSESFMIYSDASKKGLGYVLMQKGKVVAYASRQLKRHEQNYPTHDLELEIVVFALKIWR 248
           DGS +F+IYSDASKKGLG VLMQ+GKVVAYASRQLK HEQNYPTHDLEL  VVFALKIWR
Sbjct: 242 DGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWR 301

Query: 249 HYLYDEKIQIFTDHKSLKYFFTQKELNMR------------------------------- 308
           HYLY EKIQI+TDHKSLKYFFTQKELNMR                               
Sbjct: 302 HYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDYEILYHPGKANVVADALSR 361

Query: 309 KVAHSAALITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLRQRLIVAQLIDPYVVE 368
           KVAHSAALITKQ PLLRD ERAEIAVSVGEVT+QLAQ +VQPTLRQ++I  QL DPY+ E
Sbjct: 362 KVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQFSVQPTLRQKIIATQLNDPYLAE 421

Query: 369 KRLLVEAGQSEDFSISSDDELTFDRRLTAQN----------------------SKGLYSD 428
           KR +VE GQ EDFSISSDD L F+ RL                          S  +Y D
Sbjct: 422 KRRMVETGQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQD 481

Query: 429 LGC--------------------------------------------------------- 488
           L                                                           
Sbjct: 482 LRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPVGLLQPLSVPGWKWESVSMDFITGLP 541

Query: 489 -----YRQIWVVVNRLTKSAHFIPGKSTYTASKWGQSYMTMIVRLHGVPVSIISDRDARF 548
                Y  IWVVV+RLTKSAHF+PGKSTYTASKWGQ YMT IVRLHGVPVSI+SDRDARF
Sbjct: 542 KTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARF 601

Query: 549 TSKFWKGLQLALDTRLDFSTAFHPQIDGQTKRLNQVLEDMLRAYVLEFSGSWDSHFHLME 587
           TSKFWKGLQLAL TRLDFSTAFHPQ DGQT+RLNQ+LEDMLR  VLEFS SWDSH HLME
Sbjct: 602 TSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRVCVLEFSESWDSHLHLME 661

[Close]

BLAST of MELO.jh101001.1 vs. NCBI nr
Match: KAA0035890.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 867 bits (2241), Expect = 6.03e-303
Identity = 483/749 (64.49%), Postives = 518/749 (69.16%), Query Frame = 0


Query: 11  RYGNYEFIVMSFGLTNAPAVFMDLINRVFKDLLDTFVIVFIDDILVYSKAEVEHEDHLHQ 70
           RYG+YEF+VMSFGLTNAPAV MDL+NRVFKD LD+FVIVFIDDIL+YSK E EHE+HLHQ
Sbjct: 242 RYGHYEFVVMSFGLTNAPAVIMDLMNRVFKDFLDSFVIVFIDDILIYSKIEAEHEEHLHQ 301

Query: 71  VLGTLRANKLYAKFFKCEFWLKMVSFLGHVVSSEGVSVDPTKIEAVTSWPQSSTVSEIRS 130
           VL TLRANKLYAKF KCEFWL+ V+FLGHVVSSEGVSVDP KIEAVT+WP+ STVSEIRS
Sbjct: 302 VLETLRANKLYAKFSKCEFWLRKVAFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRS 361

Query: 131 FMGLTG--------------------------AQAEAC------------VCPVLTVPDG 190
           F+GL G                            + AC              PVLTVPDG
Sbjct: 362 FLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDG 421

Query: 191 SESFMIYSDASKKGLGYVLMQKGKVVAYASRQLKRHEQNYPTHDLELEIVVFALKIWRHY 250
           S +F+IYSDASKKGLG VLMQ+GKVVAYASRQLK HEQNYPTHDLEL  VVFALKIWRHY
Sbjct: 422 SGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHY 481

Query: 251 LYDEKIQIFTDHKSLKYFFTQKELNMR-------------------------------KV 310
           LY EKIQI+TDHKSLKYFFTQKELNMR                               KV
Sbjct: 482 LYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV 541

Query: 311 AHSAALITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLRQRLIVAQLIDPYVVEKR 370
           AHSAALITKQ PLLRD ERAEIAVSVGEVT+QLAQL+VQPTLRQ++I AQL DPY+ EKR
Sbjct: 542 AHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKR 601

Query: 371 LLVEAGQSEDFSISSDDELTFDRRLTAQN----------------------SKGLYSDLG 430
            +VE GQ EDFSISSDD L F+ RL                          S  +Y DL 
Sbjct: 602 RMVETGQGEDFSISSDDGLMFEGRLCVPEDSAVKMELLTEAHSSPFTMHPGSTKMYQDLR 661

Query: 431 C----------------------------------------------------------- 490
                                                                       
Sbjct: 662 SVYWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKT 721

Query: 491 ---YRQIWVVVNRLTKSAHFIPGKSTYTASKWGQSYMTMIVRLHGVPVSIISDRDARFTS 550
              Y  IWVVV+RLTKSAHF+PGKSTYTASKWGQ YMT IVRLHGVPVSIISDRDARFTS
Sbjct: 722 LKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTS 781

Query: 551 KFWKGLQLALDTRLDFSTAFHPQIDGQTKRLNQVLEDMLRAYVLEFSGSWDSHFHLMEFA 587
           KFWKGLQLAL TRLDFST FHPQ DGQT+RLNQ+LEDMLRA VLEFSGSWDSH HLMEFA
Sbjct: 782 KFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFA 841

[Close]

BLAST of MELO.jh101001.1 vs. NCBI nr
Match: TYK18480.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 865 bits (2234), Expect = 6.90e-302
Identity = 485/751 (64.58%), Postives = 519/751 (69.11%), Query Frame = 0


Query: 9   RYRYGNYEFIVMSFGLTNAPAVFMDLINRVFKDLLDTFVIVFIDDILVYSKAEVEHEDHL 68
           R RYG+YEFIVMSFGLTNAPAVFMDL+NRVFKD LD+FVIVFIDDIL+YSK E EHE+HL
Sbjct: 240 RSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHL 299

Query: 69  HQVLGTLRANKLYAKFFKCEFWLKMVSFLGHVVSSEGVSVDPTKIEAVTSWPQSSTVSEI 128
           HQVL TLRANKLYAKF KCEFWL+ V+FLGHVVSSEGVSVDPTKIEAVT+WP+ STVSEI
Sbjct: 300 HQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPTKIEAVTNWPRPSTVSEI 359

Query: 129 RSFMGLTG--------------------------AQAEAC------------VCPVLTVP 188
           RSF+GL G                            + AC              PVLTVP
Sbjct: 360 RSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVP 419

Query: 189 DGSESFMIYSDASKKGLGYVLMQKGKVVAYASRQLKRHEQNYPTHDLELEIVVFALKIWR 248
           DGS SF+IYSDA KKGLG VLMQ+GKVVAYASRQLK HEQNYPTHDLEL  VVFALKIWR
Sbjct: 420 DGSGSFVIYSDAFKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWR 479

Query: 249 HYLYDEKIQIFTDHKSLKYFFTQKELNMR------------------------------- 308
           HYLY +KIQI+TDHKSLKYFFTQKELNMR                               
Sbjct: 480 HYLYGKKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCDILYHPGKANVVADALSR 539

Query: 309 KVAHSAALITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLRQRLIVAQLIDPYVVE 368
           KVAHSAA ITKQ PLLRD ERAEIAVSVGEVTSQLAQL+VQPTLRQ++IVAQL DPY+VE
Sbjct: 540 KVAHSAAPITKQTPLLRDFERAEIAVSVGEVTSQLAQLSVQPTLRQKIIVAQLNDPYLVE 599

Query: 369 KRLLVEAGQSEDFSISSDDELTFDRRLTAQN----------------------SKGLYSD 428
           KR +VE GQ E+FSISSD  L F+ RL                          S  +Y D
Sbjct: 600 KRHMVETGQRENFSISSDGGLMFEGRLCVPEDSVVKTELLSEAHSSLFTMHPGSTKMYQD 659

Query: 429 LGC--------------------------------------------------------- 488
           L                                                           
Sbjct: 660 LRSVYWWRNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITGLP 719

Query: 489 -----YRQIWVVVNRLTKSAHFIPGKSTYTASKWGQSYMTMIVRLHGVPVSIISDRDARF 548
                Y  IWVVV++LTKSAHF+PGKSTYTASKWGQ YMT IVRLHGVPVSIISDRD RF
Sbjct: 720 KTLKGYTVIWVVVDKLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDTRF 779

Query: 549 TSKFWKGLQLALDTRLDFSTAFHPQIDGQTKRLNQVLEDMLRAYVLEFSGSWDSHFHLME 587
           TSKFWKGLQLAL TRLDFSTAFHPQ DGQT+RLNQ+ EDMLRA VLEFSGSWDSH HLME
Sbjct: 780 TSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQIFEDMLRACVLEFSGSWDSHLHLME 839

[Close]

BLAST of MELO.jh101001.1 vs. NCBI nr
Match: KAA0040942.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 853 bits (2205), Expect = 3.45e-301
Identity = 478/740 (64.59%), Postives = 512/740 (69.19%), Query Frame = 0


Query: 20  MSFGLTNAPAVFMDLINRVFKDLLDTFVIVFIDDILVYSKAEVEHEDHLHQVLGTLRANK 79
           MSFGLTNAPAVFMDL+N VFKD LD+FVIVFIDDIL+YSK E EHE+HLHQVL TLRANK
Sbjct: 1   MSFGLTNAPAVFMDLMNMVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 60

Query: 80  LYAKFFKCEFWLKMVSFLGHVVSSEGVSVDPTKIEAVTSWPQSSTVSEIRSFMGLTG--- 139
           LYAKFFKCEFWL+ V+FLGHVVSSEGVSVDP KIEAVT+WP+ STVSEIRSF+GL G   
Sbjct: 61  LYAKFFKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYR 120

Query: 140 -----------------------AQAEAC------------VCPVLTVPDGSESFMIYSD 199
                                    + AC              PVLTVPDGS +F+IYSD
Sbjct: 121 RFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSD 180

Query: 200 ASKKGLGYVLMQKGKVVAYASRQLKRHEQNYPTHDLELEIVVFALKIWRHYLYDEKIQIF 259
           ASKKGLG VLMQ+GKVVAYASRQLK HEQNYPTHDLEL  VV ALKIWRHYLY EKIQI+
Sbjct: 181 ASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVLALKIWRHYLYGEKIQIY 240

Query: 260 TDHKSLKYFFTQKELNMR-------------------------------KVAHSAALITK 319
           TDHKSLKYFFTQKELNMR                               KVAHSAALITK
Sbjct: 241 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK 300

Query: 320 QAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLRQRLIVAQLIDPYVVEKRLLVEAGQSE 379
           Q PLLRD ERAEIAVSVGEVT+QLAQL+VQPTLRQ++I AQL DPY+ EKR +VE GQ E
Sbjct: 301 QTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGE 360

Query: 380 DFSISSDDELTFDRRLTAQN----------------------SKGLYSDL-------GCY 439
           DFSISSDD L F+ RL                          S  +Y DL       G  
Sbjct: 361 DFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMK 420

Query: 440 RQ-------------------------------------------------------IWV 499
           R+                                                       IWV
Sbjct: 421 REVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGHTVIWV 480

Query: 500 VVNRLTKSAHFIPGKSTYTASKWGQSYMTMIVRLHGVPVSIISDRDARFTSKFWKGLQLA 559
           VV+RLTKSAHF+PGKSTYTASKWGQ YMT IVRLHGVPVSIISDRDARFTSKFWKGLQLA
Sbjct: 481 VVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLA 540

Query: 560 LDTRLDFSTAFHPQIDGQTKRLNQVLEDMLRAYVLEFSGSWDSHFHLMEFAYNNSYQATI 587
           L TRLDFSTAFHPQ DGQT+RLNQ+LEDMLRA VLEFSGSWDSH HLMEFAYNNSYQATI
Sbjct: 541 LGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI 600

[Close]

BLAST of MELO.jh101001.1 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 5.4e-48
Identity = 188/734 (25.61%), Postives = 303/734 (41.28%), Query Frame = 0


Query: 13   GNYEFIVMSFGLTNAPAVFMDLINRVFKDLLDTFVIVFIDDILVYSKAEVEHEDHLHQVL 72
            G +E++VM +G++ APA F   IN +  +  ++ V+ ++DDIL++SK+E EH  H+  VL
Sbjct: 527  GVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVL 586

Query: 73   GTLRANKLYAKFFKCEFWLKMVSFLGHVVSSEGVSVDPTKIEAVTSWPQSSTVSEIRSFM 132
              L+   L     KCEF    V F+G+ +S +G +     I+ V  W Q     E+R F+
Sbjct: 587  QKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFL 646

Query: 133  G------------------------------LTGAQAEA------CVC--PVLTVPDGSE 192
            G                               T  Q +A      C+   PVL   D S+
Sbjct: 647  GSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSK 706

Query: 193  SFMIYSDASKKGLGYVLMQKGK-----VVAYASRQLKRHEQNYPTHDLELEIVVFALKIW 252
              ++ +DAS   +G VL QK        V Y S ++ + + NY   D E+  ++ +LK W
Sbjct: 707  KILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHW 766

Query: 253  RHYLYD--EKIQIFTDHKSLKYFFTQK--------------------ELNMRKVAHS--- 312
            RHYL    E  +I TDH++L    T +                    E+N R  + +   
Sbjct: 767  RHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIA 826

Query: 313  ---AALITKQAPLLRDLERAEI-AVSVGEVTSQLA-QLTVQPTLRQRLIVAQLIDPYVVE 372
               + ++ +  P+ +D E   I  V+   +T     Q+  + T   +L+     +   VE
Sbjct: 827  DALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVE 886

Query: 373  KRLLVEAG----QSEDFSISSDDELT------------------------FDRRLT---- 432
            + + ++ G      +   + +D +LT                          RR T    
Sbjct: 887  ENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGI 946

Query: 433  ------------------AQNSK----------------GLYSDL-------GCYRQIWV 492
                              ++N K                 L  D          Y  ++V
Sbjct: 947  RKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFV 1006

Query: 493  VVNRLTKSAHFIPGKSTYTASKWGQSYMTMIVRLHGVPVSIISDRDARFTSKFWKGLQLA 552
            VV+R +K A  +P   + TA +  + +   ++   G P  II+D D  FTS+ WK     
Sbjct: 1007 VVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHK 1066

Query: 553  LDTRLDFSTAFHPQIDGQTKRLNQVLEDMLRAYVLEFSGSWDSHFHLMEFAYNNSYQATI 582
             +  + FS  + PQ DGQT+R NQ +E +LR        +W  H  L++ +YNN+  +  
Sbjct: 1067 YNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSAT 1126

[Close]

BLAST of MELO.jh101001.1 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 5.4e-48
Identity = 188/734 (25.61%), Postives = 303/734 (41.28%), Query Frame = 0


Query: 13   GNYEFIVMSFGLTNAPAVFMDLINRVFKDLLDTFVIVFIDDILVYSKAEVEHEDHLHQVL 72
            G +E++VM +G++ APA F   IN +  +  ++ V+ ++DDIL++SK+E EH  H+  VL
Sbjct: 527  GVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVL 586

Query: 73   GTLRANKLYAKFFKCEFWLKMVSFLGHVVSSEGVSVDPTKIEAVTSWPQSSTVSEIRSFM 132
              L+   L     KCEF    V F+G+ +S +G +     I+ V  W Q     E+R F+
Sbjct: 587  QKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFL 646

Query: 133  G------------------------------LTGAQAEA------CVC--PVLTVPDGSE 192
            G                               T  Q +A      C+   PVL   D S+
Sbjct: 647  GSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSK 706

Query: 193  SFMIYSDASKKGLGYVLMQKGK-----VVAYASRQLKRHEQNYPTHDLELEIVVFALKIW 252
              ++ +DAS   +G VL QK        V Y S ++ + + NY   D E+  ++ +LK W
Sbjct: 707  KILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHW 766

Query: 253  RHYLYD--EKIQIFTDHKSLKYFFTQK--------------------ELNMRKVAHS--- 312
            RHYL    E  +I TDH++L    T +                    E+N R  + +   
Sbjct: 767  RHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIA 826

Query: 313  ---AALITKQAPLLRDLERAEI-AVSVGEVTSQLA-QLTVQPTLRQRLIVAQLIDPYVVE 372
               + ++ +  P+ +D E   I  V+   +T     Q+  + T   +L+     +   VE
Sbjct: 827  DALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVE 886

Query: 373  KRLLVEAG----QSEDFSISSDDELT------------------------FDRRLT---- 432
            + + ++ G      +   + +D +LT                          RR T    
Sbjct: 887  ENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGI 946

Query: 433  ------------------AQNSK----------------GLYSDL-------GCYRQIWV 492
                              ++N K                 L  D          Y  ++V
Sbjct: 947  RKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFV 1006

Query: 493  VVNRLTKSAHFIPGKSTYTASKWGQSYMTMIVRLHGVPVSIISDRDARFTSKFWKGLQLA 552
            VV+R +K A  +P   + TA +  + +   ++   G P  II+D D  FTS+ WK     
Sbjct: 1007 VVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHK 1066

Query: 553  LDTRLDFSTAFHPQIDGQTKRLNQVLEDMLRAYVLEFSGSWDSHFHLMEFAYNNSYQATI 582
             +  + FS  + PQ DGQT+R NQ +E +LR        +W  H  L++ +YNN+  +  
Sbjct: 1067 YNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSAT 1126

[Close]

BLAST of MELO.jh101001.1 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 5.4e-48
Identity = 188/734 (25.61%), Postives = 303/734 (41.28%), Query Frame = 0


Query: 13   GNYEFIVMSFGLTNAPAVFMDLINRVFKDLLDTFVIVFIDDILVYSKAEVEHEDHLHQVL 72
            G +E++VM +G++ APA F   IN +  +  ++ V+ ++DDIL++SK+E EH  H+  VL
Sbjct: 527  GVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVL 586

Query: 73   GTLRANKLYAKFFKCEFWLKMVSFLGHVVSSEGVSVDPTKIEAVTSWPQSSTVSEIRSFM 132
              L+   L     KCEF    V F+G+ +S +G +     I+ V  W Q     E+R F+
Sbjct: 587  QKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFL 646

Query: 133  G------------------------------LTGAQAEA------CVC--PVLTVPDGSE 192
            G                               T  Q +A      C+   PVL   D S+
Sbjct: 647  GSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSK 706

Query: 193  SFMIYSDASKKGLGYVLMQKGK-----VVAYASRQLKRHEQNYPTHDLELEIVVFALKIW 252
              ++ +DAS   +G VL QK        V Y S ++ + + NY   D E+  ++ +LK W
Sbjct: 707  KILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHW 766

Query: 253  RHYLYD--EKIQIFTDHKSLKYFFTQK--------------------ELNMRKVAHS--- 312
            RHYL    E  +I TDH++L    T +                    E+N R  + +   
Sbjct: 767  RHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIA 826

Query: 313  ---AALITKQAPLLRDLERAEI-AVSVGEVTSQLA-QLTVQPTLRQRLIVAQLIDPYVVE 372
               + ++ +  P+ +D E   I  V+   +T     Q+  + T   +L+     +   VE
Sbjct: 827  DALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVE 886

Query: 373  KRLLVEAG----QSEDFSISSDDELT------------------------FDRRLT---- 432
            + + ++ G      +   + +D +LT                          RR T    
Sbjct: 887  ENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGI 946

Query: 433  ------------------AQNSK----------------GLYSDL-------GCYRQIWV 492
                              ++N K                 L  D          Y  ++V
Sbjct: 947  RKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFV 1006

Query: 493  VVNRLTKSAHFIPGKSTYTASKWGQSYMTMIVRLHGVPVSIISDRDARFTSKFWKGLQLA 552
            VV+R +K A  +P   + TA +  + +   ++   G P  II+D D  FTS+ WK     
Sbjct: 1007 VVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHK 1066

Query: 553  LDTRLDFSTAFHPQIDGQTKRLNQVLEDMLRAYVLEFSGSWDSHFHLMEFAYNNSYQATI 582
             +  + FS  + PQ DGQT+R NQ +E +LR        +W  H  L++ +YNN+  +  
Sbjct: 1067 YNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSAT 1126

[Close]

BLAST of MELO.jh101001.1 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 5.4e-48
Identity = 188/734 (25.61%), Postives = 303/734 (41.28%), Query Frame = 0


Query: 13   GNYEFIVMSFGLTNAPAVFMDLINRVFKDLLDTFVIVFIDDILVYSKAEVEHEDHLHQVL 72
            G +E++VM +G++ APA F   IN +  +  ++ V+ ++DDIL++SK+E EH  H+  VL
Sbjct: 527  GVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVL 586

Query: 73   GTLRANKLYAKFFKCEFWLKMVSFLGHVVSSEGVSVDPTKIEAVTSWPQSSTVSEIRSFM 132
              L+   L     KCEF    V F+G+ +S +G +     I+ V  W Q     E+R F+
Sbjct: 587  QKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFL 646

Query: 133  G------------------------------LTGAQAEA------CVC--PVLTVPDGSE 192
            G                               T  Q +A      C+   PVL   D S+
Sbjct: 647  GSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSK 706

Query: 193  SFMIYSDASKKGLGYVLMQKGK-----VVAYASRQLKRHEQNYPTHDLELEIVVFALKIW 252
              ++ +DAS   +G VL QK        V Y S ++ + + NY   D E+  ++ +LK W
Sbjct: 707  KILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHW 766

Query: 253  RHYLYD--EKIQIFTDHKSLKYFFTQK--------------------ELNMRKVAHS--- 312
            RHYL    E  +I TDH++L    T +                    E+N R  + +   
Sbjct: 767  RHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIA 826

Query: 313  ---AALITKQAPLLRDLERAEI-AVSVGEVTSQLA-QLTVQPTLRQRLIVAQLIDPYVVE 372
               + ++ +  P+ +D E   I  V+   +T     Q+  + T   +L+     +   VE
Sbjct: 827  DALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVE 886

Query: 373  KRLLVEAG----QSEDFSISSDDELT------------------------FDRRLT---- 432
            + + ++ G      +   + +D +LT                          RR T    
Sbjct: 887  ENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGI 946

Query: 433  ------------------AQNSK----------------GLYSDL-------GCYRQIWV 492
                              ++N K                 L  D          Y  ++V
Sbjct: 947  RKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFV 1006

Query: 493  VVNRLTKSAHFIPGKSTYTASKWGQSYMTMIVRLHGVPVSIISDRDARFTSKFWKGLQLA 552
            VV+R +K A  +P   + TA +  + +   ++   G P  II+D D  FTS+ WK     
Sbjct: 1007 VVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHK 1066

Query: 553  LDTRLDFSTAFHPQIDGQTKRLNQVLEDMLRAYVLEFSGSWDSHFHLMEFAYNNSYQATI 582
             +  + FS  + PQ DGQT+R NQ +E +LR        +W  H  L++ +YNN+  +  
Sbjct: 1067 YNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSAT 1126

[Close]

BLAST of MELO.jh101001.1 vs. ExPASy Swiss-Prot
Match: P0CT37 (Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-4 PE=3 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 5.4e-48
Identity = 188/734 (25.61%), Postives = 303/734 (41.28%), Query Frame = 0


Query: 13   GNYEFIVMSFGLTNAPAVFMDLINRVFKDLLDTFVIVFIDDILVYSKAEVEHEDHLHQVL 72
            G +E++VM +G++ APA F   IN +  +  ++ V+ ++DDIL++SK+E EH  H+  VL
Sbjct: 527  GVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVL 586

Query: 73   GTLRANKLYAKFFKCEFWLKMVSFLGHVVSSEGVSVDPTKIEAVTSWPQSSTVSEIRSFM 132
              L+   L     KCEF    V F+G+ +S +G +     I+ V  W Q     E+R F+
Sbjct: 587  QKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFL 646

Query: 133  G------------------------------LTGAQAEA------CVC--PVLTVPDGSE 192
            G                               T  Q +A      C+   PVL   D S+
Sbjct: 647  GSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSK 706

Query: 193  SFMIYSDASKKGLGYVLMQKGK-----VVAYASRQLKRHEQNYPTHDLELEIVVFALKIW 252
              ++ +DAS   +G VL QK        V Y S ++ + + NY   D E+  ++ +LK W
Sbjct: 707  KILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHW 766

Query: 253  RHYLYD--EKIQIFTDHKSLKYFFTQK--------------------ELNMRKVAHS--- 312
            RHYL    E  +I TDH++L    T +                    E+N R  + +   
Sbjct: 767  RHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIA 826

Query: 313  ---AALITKQAPLLRDLERAEI-AVSVGEVTSQLA-QLTVQPTLRQRLIVAQLIDPYVVE 372
               + ++ +  P+ +D E   I  V+   +T     Q+  + T   +L+     +   VE
Sbjct: 827  DALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVE 886

Query: 373  KRLLVEAG----QSEDFSISSDDELT------------------------FDRRLT---- 432
            + + ++ G      +   + +D +LT                          RR T    
Sbjct: 887  ENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGI 946

Query: 433  ------------------AQNSK----------------GLYSDL-------GCYRQIWV 492
                              ++N K                 L  D          Y  ++V
Sbjct: 947  RKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFV 1006

Query: 493  VVNRLTKSAHFIPGKSTYTASKWGQSYMTMIVRLHGVPVSIISDRDARFTSKFWKGLQLA 552
            VV+R +K A  +P   + TA +  + +   ++   G P  II+D D  FTS+ WK     
Sbjct: 1007 VVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHK 1066

Query: 553  LDTRLDFSTAFHPQIDGQTKRLNQVLEDMLRAYVLEFSGSWDSHFHLMEFAYNNSYQATI 582
             +  + FS  + PQ DGQT+R NQ +E +LR        +W  H  L++ +YNN+  +  
Sbjct: 1067 YNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSAT 1126

[Close]

BLAST of MELO.jh101001.1 vs. ExPASy TrEMBL
Match: A0A5A7TVN9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G00750 PE=4 SV=1)

HSP 1 Score: 875 bits (2261), Expect = 2.76e-306
Identity = 486/751 (64.71%), Postives = 523/751 (69.64%), Query Frame = 0


Query: 9   RYRYGNYEFIVMSFGLTNAPAVFMDLINRVFKDLLDTFVIVFIDDILVYSKAEVEHEDHL 68
           R RYG+YEF+V+SFGLTNAPAVFMDL+NRVFKD LD+FVIVFIDDIL+YSK E EHE+HL
Sbjct: 240 RSRYGHYEFVVISFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHL 299

Query: 69  HQVLGTLRANKLYAKFFKCEFWLKMVSFLGHVVSSEGVSVDPTKIEAVTSWPQSSTVSEI 128
           HQVL TLRANKLYAKF KCEFWL+ V+FLGHVVSSEGVSVDP KIEAVT+WP+ STVSEI
Sbjct: 300 HQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEI 359

Query: 129 RSFMGLTG--------------------------AQAEACVC------------PVLTVP 188
           RSF+GL G                            + AC C            PVLTVP
Sbjct: 360 RSFLGLAGYYRRFVEDLSRIASPLTQLTRKGTPFVWSPACECSFQELKQKLVTAPVLTVP 419

Query: 189 DGSESFMIYSDASKKGLGYVLMQKGKVVAYASRQLKRHEQNYPTHDLELEIVVFALKIWR 248
           DGS +F+IYSDASKKGLG VLMQ+GKVVAYASRQLK HEQNYPTHDLEL  VVFALKIWR
Sbjct: 420 DGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWR 479

Query: 249 HYLYDEKIQIFTDHKSLKYFFTQKELNMR------------------------------- 308
           HYLY EKIQI+TDHKSLKYFFTQKELNMR                               
Sbjct: 480 HYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADSLSR 539

Query: 309 KVAHSAALITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLRQRLIVAQLIDPYVVE 368
           KVAHSAALITKQ PLLRD ERAEIAVSVGEVT+QLAQL+VQPTLRQ++I AQL DPY+ E
Sbjct: 540 KVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAE 599

Query: 369 KRLLVEAGQSEDFSISSDDELTFDRRLTAQN----------------------SKGLYSD 428
           KR +VE GQ EDFSISSDD L F+ RL                          S  +Y D
Sbjct: 600 KRRMVETGQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQD 659

Query: 429 LGC--------------------------------------------------------- 488
           L                                                           
Sbjct: 660 LRSVYWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLP 719

Query: 489 -----YRQIWVVVNRLTKSAHFIPGKSTYTASKWGQSYMTMIVRLHGVPVSIISDRDARF 548
                Y  IWVVV+RLTKSAHF+PGKSTYTASKWGQ Y+T IVRLHGVPVSIISDRDARF
Sbjct: 720 KTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYVTEIVRLHGVPVSIISDRDARF 779

Query: 549 TSKFWKGLQLALDTRLDFSTAFHPQIDGQTKRLNQVLEDMLRAYVLEFSGSWDSHFHLME 587
           TSKFWKGLQLAL TRLDFSTAFHPQ DGQT+RLNQ+LEDMLRA VLEFSGSWDSH HLME
Sbjct: 780 TSKFWKGLQLALCTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLME 839

[Close]

BLAST of MELO.jh101001.1 vs. ExPASy TrEMBL
Match: A0A5A7UQP9 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G001570 PE=4 SV=1)

HSP 1 Score: 866 bits (2238), Expect = 2.04e-305
Identity = 481/751 (64.05%), Postives = 517/751 (68.84%), Query Frame = 0


Query: 9   RYRYGNYEFIVMSFGLTNAPAVFMDLINRVFKDLLDTFVIVFIDDILVYSKAEVEHEDHL 68
           R RYG+YEF+VMSFGLTNAPAVFMDL+NRVFKD LD+FVIVFIDDIL+YSK E EHE+HL
Sbjct: 62  RSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHL 121

Query: 69  HQVLGTLRANKLYAKFFKCEFWLKMVSFLGHVVSSEGVSVDPTKIEAVTSWPQSSTVSEI 128
           HQVL TLRANKLYAKF KCEFWL+ V+FLGHVVSSEGVSVDP K EAVT+WP+ STVSEI
Sbjct: 122 HQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKTEAVTNWPRPSTVSEI 181

Query: 129 RSFMGLTG--------------------------AQAEAC------------VCPVLTVP 188
           RSF+GL G                            + AC              PVLTVP
Sbjct: 182 RSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQKLKQKLVTAPVLTVP 241

Query: 189 DGSESFMIYSDASKKGLGYVLMQKGKVVAYASRQLKRHEQNYPTHDLELEIVVFALKIWR 248
           DGS +F+IYSDASKKGLG VLMQ+GKVVAYASRQLK HEQNYPTHDLEL  VVFALKIWR
Sbjct: 242 DGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWR 301

Query: 249 HYLYDEKIQIFTDHKSLKYFFTQKELNMR------------------------------- 308
           HYLY EKIQI+TDHKSLKYFFTQKELNMR                               
Sbjct: 302 HYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDYEILYHPGKANVVADALSR 361

Query: 309 KVAHSAALITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLRQRLIVAQLIDPYVVE 368
           KVAHSAALITKQ PLLRD ERAEIAVSVGEVT+QLAQ +VQPTLRQ++I  QL DPY+ E
Sbjct: 362 KVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQFSVQPTLRQKIIATQLNDPYLAE 421

Query: 369 KRLLVEAGQSEDFSISSDDELTFDRRLTAQN----------------------SKGLYSD 428
           KR +VE GQ EDFSISSDD L F+ RL                          S  +Y D
Sbjct: 422 KRRMVETGQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQD 481

Query: 429 LGC--------------------------------------------------------- 488
           L                                                           
Sbjct: 482 LRSVYWWRGMKREVADFVSRCLVCQQVKAPRQCPVGLLQPLSVPGWKWESVSMDFITGLP 541

Query: 489 -----YRQIWVVVNRLTKSAHFIPGKSTYTASKWGQSYMTMIVRLHGVPVSIISDRDARF 548
                Y  IWVVV+RLTKSAHF+PGKSTYTASKWGQ YMT IVRLHGVPVSI+SDRDARF
Sbjct: 542 KTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARF 601

Query: 549 TSKFWKGLQLALDTRLDFSTAFHPQIDGQTKRLNQVLEDMLRAYVLEFSGSWDSHFHLME 587
           TSKFWKGLQLAL TRLDFSTAFHPQ DGQT+RLNQ+LEDMLR  VLEFS SWDSH HLME
Sbjct: 602 TSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRVCVLEFSESWDSHLHLME 661

[Close]

BLAST of MELO.jh101001.1 vs. ExPASy TrEMBL
Match: A0A5A7SXW6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00560 PE=4 SV=1)

HSP 1 Score: 867 bits (2241), Expect = 2.92e-303
Identity = 483/749 (64.49%), Postives = 518/749 (69.16%), Query Frame = 0


Query: 11  RYGNYEFIVMSFGLTNAPAVFMDLINRVFKDLLDTFVIVFIDDILVYSKAEVEHEDHLHQ 70
           RYG+YEF+VMSFGLTNAPAV MDL+NRVFKD LD+FVIVFIDDIL+YSK E EHE+HLHQ
Sbjct: 242 RYGHYEFVVMSFGLTNAPAVIMDLMNRVFKDFLDSFVIVFIDDILIYSKIEAEHEEHLHQ 301

Query: 71  VLGTLRANKLYAKFFKCEFWLKMVSFLGHVVSSEGVSVDPTKIEAVTSWPQSSTVSEIRS 130
           VL TLRANKLYAKF KCEFWL+ V+FLGHVVSSEGVSVDP KIEAVT+WP+ STVSEIRS
Sbjct: 302 VLETLRANKLYAKFSKCEFWLRKVAFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRS 361

Query: 131 FMGLTG--------------------------AQAEAC------------VCPVLTVPDG 190
           F+GL G                            + AC              PVLTVPDG
Sbjct: 362 FLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDG 421

Query: 191 SESFMIYSDASKKGLGYVLMQKGKVVAYASRQLKRHEQNYPTHDLELEIVVFALKIWRHY 250
           S +F+IYSDASKKGLG VLMQ+GKVVAYASRQLK HEQNYPTHDLEL  VVFALKIWRHY
Sbjct: 422 SGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHY 481

Query: 251 LYDEKIQIFTDHKSLKYFFTQKELNMR-------------------------------KV 310
           LY EKIQI+TDHKSLKYFFTQKELNMR                               KV
Sbjct: 482 LYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV 541

Query: 311 AHSAALITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLRQRLIVAQLIDPYVVEKR 370
           AHSAALITKQ PLLRD ERAEIAVSVGEVT+QLAQL+VQPTLRQ++I AQL DPY+ EKR
Sbjct: 542 AHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKR 601

Query: 371 LLVEAGQSEDFSISSDDELTFDRRLTAQN----------------------SKGLYSDLG 430
            +VE GQ EDFSISSDD L F+ RL                          S  +Y DL 
Sbjct: 602 RMVETGQGEDFSISSDDGLMFEGRLCVPEDSAVKMELLTEAHSSPFTMHPGSTKMYQDLR 661

Query: 431 C----------------------------------------------------------- 490
                                                                       
Sbjct: 662 SVYWWRGMKREVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKT 721

Query: 491 ---YRQIWVVVNRLTKSAHFIPGKSTYTASKWGQSYMTMIVRLHGVPVSIISDRDARFTS 550
              Y  IWVVV+RLTKSAHF+PGKSTYTASKWGQ YMT IVRLHGVPVSIISDRDARFTS
Sbjct: 722 LKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTS 781

Query: 551 KFWKGLQLALDTRLDFSTAFHPQIDGQTKRLNQVLEDMLRAYVLEFSGSWDSHFHLMEFA 587
           KFWKGLQLAL TRLDFST FHPQ DGQT+RLNQ+LEDMLRA VLEFSGSWDSH HLMEFA
Sbjct: 782 KFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFA 841

[Close]

BLAST of MELO.jh101001.1 vs. ExPASy TrEMBL
Match: A0A5D3D4M7 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold607G00520 PE=4 SV=1)

HSP 1 Score: 865 bits (2234), Expect = 3.34e-302
Identity = 485/751 (64.58%), Postives = 519/751 (69.11%), Query Frame = 0


Query: 9   RYRYGNYEFIVMSFGLTNAPAVFMDLINRVFKDLLDTFVIVFIDDILVYSKAEVEHEDHL 68
           R RYG+YEFIVMSFGLTNAPAVFMDL+NRVFKD LD+FVIVFIDDIL+YSK E EHE+HL
Sbjct: 240 RSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHL 299

Query: 69  HQVLGTLRANKLYAKFFKCEFWLKMVSFLGHVVSSEGVSVDPTKIEAVTSWPQSSTVSEI 128
           HQVL TLRANKLYAKF KCEFWL+ V+FLGHVVSSEGVSVDPTKIEAVT+WP+ STVSEI
Sbjct: 300 HQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPTKIEAVTNWPRPSTVSEI 359

Query: 129 RSFMGLTG--------------------------AQAEAC------------VCPVLTVP 188
           RSF+GL G                            + AC              PVLTVP
Sbjct: 360 RSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVP 419

Query: 189 DGSESFMIYSDASKKGLGYVLMQKGKVVAYASRQLKRHEQNYPTHDLELEIVVFALKIWR 248
           DGS SF+IYSDA KKGLG VLMQ+GKVVAYASRQLK HEQNYPTHDLEL  VVFALKIWR
Sbjct: 420 DGSGSFVIYSDAFKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWR 479

Query: 249 HYLYDEKIQIFTDHKSLKYFFTQKELNMR------------------------------- 308
           HYLY +KIQI+TDHKSLKYFFTQKELNMR                               
Sbjct: 480 HYLYGKKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCDILYHPGKANVVADALSR 539

Query: 309 KVAHSAALITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLRQRLIVAQLIDPYVVE 368
           KVAHSAA ITKQ PLLRD ERAEIAVSVGEVTSQLAQL+VQPTLRQ++IVAQL DPY+VE
Sbjct: 540 KVAHSAAPITKQTPLLRDFERAEIAVSVGEVTSQLAQLSVQPTLRQKIIVAQLNDPYLVE 599

Query: 369 KRLLVEAGQSEDFSISSDDELTFDRRLTAQN----------------------SKGLYSD 428
           KR +VE GQ E+FSISSD  L F+ RL                          S  +Y D
Sbjct: 600 KRHMVETGQRENFSISSDGGLMFEGRLCVPEDSVVKTELLSEAHSSLFTMHPGSTKMYQD 659

Query: 429 LGC--------------------------------------------------------- 488
           L                                                           
Sbjct: 660 LRSVYWWRNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITGLP 719

Query: 489 -----YRQIWVVVNRLTKSAHFIPGKSTYTASKWGQSYMTMIVRLHGVPVSIISDRDARF 548
                Y  IWVVV++LTKSAHF+PGKSTYTASKWGQ YMT IVRLHGVPVSIISDRD RF
Sbjct: 720 KTLKGYTVIWVVVDKLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDTRF 779

Query: 549 TSKFWKGLQLALDTRLDFSTAFHPQIDGQTKRLNQVLEDMLRAYVLEFSGSWDSHFHLME 587
           TSKFWKGLQLAL TRLDFSTAFHPQ DGQT+RLNQ+ EDMLRA VLEFSGSWDSH HLME
Sbjct: 780 TSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQIFEDMLRACVLEFSGSWDSHLHLME 839

[Close]

BLAST of MELO.jh101001.1 vs. ExPASy TrEMBL
Match: A0A5A7TBV4 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold125G001380 PE=4 SV=1)

HSP 1 Score: 853 bits (2205), Expect = 1.67e-301
Identity = 478/740 (64.59%), Postives = 512/740 (69.19%), Query Frame = 0


Query: 20  MSFGLTNAPAVFMDLINRVFKDLLDTFVIVFIDDILVYSKAEVEHEDHLHQVLGTLRANK 79
           MSFGLTNAPAVFMDL+N VFKD LD+FVIVFIDDIL+YSK E EHE+HLHQVL TLRANK
Sbjct: 1   MSFGLTNAPAVFMDLMNMVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 60

Query: 80  LYAKFFKCEFWLKMVSFLGHVVSSEGVSVDPTKIEAVTSWPQSSTVSEIRSFMGLTG--- 139
           LYAKFFKCEFWL+ V+FLGHVVSSEGVSVDP KIEAVT+WP+ STVSEIRSF+GL G   
Sbjct: 61  LYAKFFKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYR 120

Query: 140 -----------------------AQAEAC------------VCPVLTVPDGSESFMIYSD 199
                                    + AC              PVLTVPDGS +F+IYSD
Sbjct: 121 RFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSD 180

Query: 200 ASKKGLGYVLMQKGKVVAYASRQLKRHEQNYPTHDLELEIVVFALKIWRHYLYDEKIQIF 259
           ASKKGLG VLMQ+GKVVAYASRQLK HEQNYPTHDLEL  VV ALKIWRHYLY EKIQI+
Sbjct: 181 ASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVLALKIWRHYLYGEKIQIY 240

Query: 260 TDHKSLKYFFTQKELNMR-------------------------------KVAHSAALITK 319
           TDHKSLKYFFTQKELNMR                               KVAHSAALITK
Sbjct: 241 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK 300

Query: 320 QAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLRQRLIVAQLIDPYVVEKRLLVEAGQSE 379
           Q PLLRD ERAEIAVSVGEVT+QLAQL+VQPTLRQ++I AQL DPY+ EKR +VE GQ E
Sbjct: 301 QTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGE 360

Query: 380 DFSISSDDELTFDRRLTAQN----------------------SKGLYSDL-------GCY 439
           DFSISSDD L F+ RL                          S  +Y DL       G  
Sbjct: 361 DFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMK 420

Query: 440 RQ-------------------------------------------------------IWV 499
           R+                                                       IWV
Sbjct: 421 REVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGHTVIWV 480

Query: 500 VVNRLTKSAHFIPGKSTYTASKWGQSYMTMIVRLHGVPVSIISDRDARFTSKFWKGLQLA 559
           VV+RLTKSAHF+PGKSTYTASKWGQ YMT IVRLHGVPVSIISDRDARFTSKFWKGLQLA
Sbjct: 481 VVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLA 540

Query: 560 LDTRLDFSTAFHPQIDGQTKRLNQVLEDMLRAYVLEFSGSWDSHFHLMEFAYNNSYQATI 587
           L TRLDFSTAFHPQ DGQT+RLNQ+LEDMLRA VLEFSGSWDSH HLMEFAYNNSYQATI
Sbjct: 541 LGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI 600

[Close]

BLAST of MELO.jh101001.1 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 68.6 bits (166), Expect = 2.4e-11
Identity = 31/73 (42.47%), Postives = 45/73 (61.64%), Query Frame = 0


Query: 66  DHLHQVLGTLRANKLYAKFFKCEFWLKMVSFLG--HVVSSEGVSVDPTKIEAVTSWPQSS 125
           +HL  VL     ++ YA   KC F    +++LG  H++S EGVS DP K+EA+  WP+  
Sbjct: 2   NHLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPK 61

Query: 126 TVSEIRSFMGLTG 137
             +E+R F+GLTG
Sbjct: 62  NTTELRGFLGLTG 74

The following BLAST results are available for this feature:

BLAST of MELO.jh101001.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0045309.1	5.71e-306	64.71	pol protein [Cucumis melo var. makuwa]	[more]
KAA0056636.1	4.22e-305	64.05	pol protein [Cucumis melo var. makuwa]	[more]
KAA0035890.1	6.03e-303	64.49	pol protein [Cucumis melo var. makuwa]	[more]
TYK18480.1	6.90e-302	64.58	pol protein [Cucumis melo var. makuwa]	[more]
KAA0040942.1	3.45e-301	64.59	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of MELO.jh101001.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CT41	5.4e-48	25.61	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	5.4e-48	25.61	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	5.4e-48	25.61	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	5.4e-48	25.61	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT37	5.4e-48	25.61	Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of MELO.jh101001.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TVN9	2.76e-306	64.71	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold31...	[more]
A0A5A7UQP9	2.04e-305	64.05	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G001570 P...	[more]
A0A5A7SXW6	2.92e-303	64.49	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56...	[more]
A0A5D3D4M7	3.34e-302	64.58	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold607G00520 PE...	[more]
A0A5A7TBV4	1.67e-301	64.59	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold125G001380 P...	[more]

BLAST of MELO.jh101001.1 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	2.4e-11	42.47	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 5..101 e-value: 1.9E-29 score: 104.3
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 329..514 e-value: 9.1E-30 score: 105.4
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 153..246 e-value: 8.8E-28 score: 96.7
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 12..100 e-value: 1.1E-12 score: 47.9
None	No IPR available	GENE3D	3.10.20.370		coord: 151..221 e-value: 5.0E-6 score: 28.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 664..697
None	No IPR available	PANTHER	PTHR47266	FAMILY NOT NAMED	coord: 12..136 coord: 341..581
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 158..239 e-value: 1.84088E-33 score: 122.601
None	No IPR available	CDD	cd01647	RT_LTR	coord: 9..101 e-value: 4.59841E-36 score: 131.949
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 312..478 score: 11.954671
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 10..248
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 341..472

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO.jh101001.1.t1	MELO.jh101001.1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding