MELO.jh034649.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh034649.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr03: 3623597 .. 3624031 (-)
RNA-Seq ExpressionMELO.jh034649.1
SyntenyMELO.jh034649.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
TCGCCTCGTTCGGCACACCATTTTTCTCCTTTCGTGATTCGGTTAGCAGTTCTTCAACATGAGGGCTAAGGTGCGTTTGGAAGTTTTTTAATCAAGTTTTTTTTTAATCATATAGCTTTGTTCTTCTGTTGATTCTTATTGTTGGTTTGTTTTTTCCTTTTTCTTTTGATTCACCAGTGGAAGAAGAAGAGAATGAGGAGATTGAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCCAAGTAGTTTGTGTCTTCTTTAAATAAAAAAAAGACAGCCGTTCTTTTAGTTTCTACTGATCTAGGACGAGTAATAGTTTATTTTCTTGTGTTTTTGTTGGATTTTTATCGAGTTTTTTTAGTTTCGATGAGCAATTTTGTTGAACTTACTTCCCTCTGGGATCTACATTATTGAATTCACTTTCTGGAGTTTCTGAAA

mRNA sequence

TCGCCTCGTTCGGCACACCATTTTTCTCCTTTCGTGATTCGGTTAGCAGTTCTTCAACATGAGGGCTAAGTGGAAGAAGAAGAGAATGAGGAGATTGAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCCAAGTAGTTTGTGTCTTCTTTAAATAAAAAAAAGACAGCCGTTCTTTTAGTTTCTACTGATCTAGGACGAGTAATAGTTTATTTTCTTGTGTTTTTGTTGGATTTTTATCGAGTTTTTTTAGTTTCGATGAGCAATTTTGTTGAACTTACTTCCCTCTGGGATCTACATTATTGAATTCACTTTCTGGAGTTTCTGAAA

Coding sequence (CDS)

ATGAGGGCTAAGTGGAAGAAGAAGAGAATGAGGAGATTGAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCCAAGTAG

Protein sequence

MRAKWKKKRMRRLKRKRRKMRQRSK
Homology
The following BLAST results are available for this feature:
BLAST of MELO.jh034649.1 vs.
Match NameE-valueIdentityDescription
BLAST of MELO.jh034649.1 vs.
Match NameE-valueIdentityDescription
BLAST of MELO.jh034649.1 vs.
Match NameE-valueIdentityDescription
BLAST of MELO.jh034649.1 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 3..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
IPR007836Ribosomal protein L41PFAMPF05162Ribosomal_L41coord: 1..25
e-value: 5.6E-12
score: 45.5

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh034649.1.t1MELO.jh034649.1.t1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome