MELO.jh034551.1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh034551.1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Major pollen allergen Ole e 6-like
Location	chr07: 24147940 .. 24148453 (-)
RNA-Seq Expression	MELO.jh034551.1
Synteny	MELO.jh034551.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAATAGGCTTACTAAAAGCTAAAACTAAAAAATGGCAAAAACTAGTACGGTTGTTTTCTTTATGTGCATTGTTGTTGTGGTGGGATCACTGCAATTCTCTAGGGCAGACATGACAGCTGAAAGGGACACTGAGATTGAGATGAGATCTAAGTTGTTGCAGAGCGAAATATCCAACGTAATGCCTCAATTCAAATCATGTGTAGAAACCTGCGCGAAAGCATGCATTGCAAAAGACAGTGCCAACACATCGTGTCATTCTACATGTGATAAAGATTGCATGAAAAAGGAAGTTGTTGGTATTGTCTTGAATCTTTGGAGAAATGTTTTTTTTTAACCAAGACGATAAATAATTTTTTTTGTGTGCGGTCAATTTTAGTTGCGAGGCAAACTTCACTTTTATTATGGAAATTAGTGAGTTTTGTAAGGTAAGGTCGGTACGTGTTCCATACTTTAATATAGTTTTGCTGCTAGAATTTGAAGGGATATGAGATAATTGAAAATTTAGAATGAGAA

mRNA sequence

AAAATAGGCTTACTAAAAGCTAAAACTAAAAAATGGCAAAAACTAGTACGGTTGTTTTCTTTATGTGCATTGTTGTTGTGGTGGGATCACTGCAATTCTCTAGGGCAGACATGACAGCTGAAAGGGACACTGAGATTGAGATGAGATCTAAGTTGTTGCAGAGCGAAATATCCAACGTAATGCCTCAATTCAAATCATGTGTAGAAACCTGCGCGAAAGCATGCATTGCAAAAGACAGTGCCAACACATCGTGTCATTCTACATGTGATAAAGATTGCATGAAAAAGGAAGTTGTTGGTATTGTCTTGAATCTTTGGAGAAATGTTTTTTTTTAACCAAGACGATAAATAATTTTTTTTGTGTGCGGTCAATTTTAGTTGCGAGGCAAACTTCACTTTTATTATGGAAATTAGTGAGTTTTGTAAGGTAAGGTCGGTACGTGTTCCATACTTTAATATAGTTTTGCTGCTAGAATTTGAAGGGATATGAGATAATTGAAAATTTAGAATGAGAA

Coding sequence (CDS)

ATGGCAAAAACTAGTACGGTTGTTTTCTTTATGTGCATTGTTGTTGTGGTGGGATCACTGCAATTCTCTAGGGCAGACATGACAGCTGAAAGGGACACTGAGATTGAGATGAGATCTAAGTTGTTGCAGAGCGAAATATCCAACGTAATGCCTCAATTCAAATCATGTGTAGAAACCTGCGCGAAAGCATGCATTGCAAAAGACAGTGCCAACACATCGTGTCATTCTACATGTGATAAAGATTGCATGAAAAAGGAAGTTGTTGGTATTGTCTTGAATCTTTGGAGAAATGTTTTTTTTTAA

Protein sequence

MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETCAKACIAKDSANTSCHSTCDKDCMKKEVVGIVLNLWRNVFF

Homology

[Close]

BLAST of MELO.jh034551.1 vs. NCBI nr
Match: KAA0035393.1 (major pollen allergen Ole e 6-like [Cucumis melo var. makuwa])

HSP 1 Score: 177 bits (449), Expect = 1.20e-55
Identity = 90/94 (95.74%), Postives = 92/94 (97.87%), Query Frame = 0


Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC 60
          MAKTSTVVFFMCIVVVVGSLQFSRADMTA+RDTEIEMRSKLLQSEIS+VMPQFKSCVETC
Sbjct: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTADRDTEIEMRSKLLQSEISSVMPQFKSCVETC 60

Query: 61 AKACIAKDSANTSCHSTCDKDCMKKEVVGIVLNL 94
           KACIAKD ANTSCHSTCDKDCMKKEVVGIVLNL
Sbjct: 61 EKACIAKDGANTSCHSTCDKDCMKKEVVGIVLNL 94

[Close]

BLAST of MELO.jh034551.1 vs. NCBI nr
Match: KAA0036015.1 (major pollen allergen Ole e 6-like [Cucumis melo var. makuwa])

HSP 1 Score: 171 bits (432), Expect = 5.48e-53
Identity = 86/88 (97.73%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC 60
          MAK+ST+VFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC
Sbjct: 1  MAKSSTIVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC 60

Query: 61 AKACIAKDSANTSCHSTCDKDCMKKEVV 88
          AKACIAKDSANTSCHSTCDKDCMKKEVV
Sbjct: 61 AKACIAKDSANTSCHSTCDKDCMKKEVV 88

[Close]

BLAST of MELO.jh034551.1 vs. NCBI nr
Match: KAE8637567.1 (hypothetical protein CSA_017844, partial [Cucumis sativus])

HSP 1 Score: 77.4 bits (189), Expect = 6.94e-16
Identity = 41/89 (46.07%), Postives = 55/89 (61.80%), Query Frame = 0


Query: 3   KTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQ-SEISNVMPQFKSCVETCA 62
           K   VVFFMCIVV+ GSLQFS+A  TA    +++   K+   +E   + PQ +SCV TC 
Sbjct: 20  KNIMVVFFMCIVVM-GSLQFSKAQTTANMSPDLQAAEKIKSIAEGMKLWPQMESCVLTCR 79

Query: 63  KACIAKDSANTSCHSTCDKDCMKKEVVGI 90
           K C AK +AN SCH  C+ DC +K +  +
Sbjct: 80  KECDAKGNANASCHQKCNNDCTEKTIASV 107

[Close]

BLAST of MELO.jh034551.1 vs. NCBI nr
Match: KAG6595593.1 (hypothetical protein SDJN03_12146, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 65.5 bits (158), Expect = 1.93e-11
Identity = 41/87 (47.13%), Postives = 49/87 (56.32%), Query Frame = 0


Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC 60
          MAK    V  MC V+VV +LQFS    TA++ TE+E + K   S+   V  +FKSC  TC
Sbjct: 1  MAKKMMAVVLMC-VLVVSALQFS----TADKSTEMEAKFKSFFSDFGTVEAKFKSCAATC 60

Query: 61 AKACIAKDSANTSCHSTCDKDCMKKEV 87
           K C      N SC S CD DC KKEV
Sbjct: 61 QKKC-----TNASCRSKCDADCGKKEV 77

[Close]

BLAST of MELO.jh034551.1 vs. NCBI nr
Match: KAG6595587.1 (hypothetical protein SDJN03_12140, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 65.1 bits (157), Expect = 3.02e-11
Identity = 39/87 (44.83%), Postives = 49/87 (56.32%), Query Frame = 0


Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC 60
          MAK    V  MC V++V +LQFS AD  AE    +E R K    ++S V  + KSC  TC
Sbjct: 1  MAKKMMAVLLMC-VLLVSALQFSTADSPAE----MEARFKSFFGDLSGVEAKLKSCAATC 60

Query: 61 AKACIAKDSANTSCHSTCDKDCMKKEV 87
           K C+AK   + SC   C+ DC KKEV
Sbjct: 61 EKECVAKGETSESCKPKCNTDCGKKEV 82

[Close]

BLAST of MELO.jh034551.1 vs. ExPASy TrEMBL
Match: A0A5A7SXV7 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13030G00010 PE=4 SV=1)

HSP 1 Score: 177 bits (449), Expect = 5.79e-56
Identity = 90/94 (95.74%), Postives = 92/94 (97.87%), Query Frame = 0


Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC 60
          MAKTSTVVFFMCIVVVVGSLQFSRADMTA+RDTEIEMRSKLLQSEIS+VMPQFKSCVETC
Sbjct: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTADRDTEIEMRSKLLQSEISSVMPQFKSCVETC 60

Query: 61 AKACIAKDSANTSCHSTCDKDCMKKEVVGIVLNL 94
           KACIAKD ANTSCHSTCDKDCMKKEVVGIVLNL
Sbjct: 61 EKACIAKDGANTSCHSTCDKDCMKKEVVGIVLNL 94

[Close]

BLAST of MELO.jh034551.1 vs. ExPASy TrEMBL
Match: A0A5A7T3F9 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold494G00090 PE=4 SV=1)

HSP 1 Score: 171 bits (432), Expect = 2.65e-53
Identity = 86/88 (97.73%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC 60
          MAK+ST+VFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC
Sbjct: 1  MAKSSTIVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC 60

Query: 61 AKACIAKDSANTSCHSTCDKDCMKKEVV 88
          AKACIAKDSANTSCHSTCDKDCMKKEVV
Sbjct: 61 AKACIAKDSANTSCHSTCDKDCMKKEVV 88

The following BLAST results are available for this feature:

BLAST of MELO.jh034551.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0035393.1	1.20e-55	95.74	major pollen allergen Ole e 6-like [Cucumis melo var. makuwa]	[more]
KAA0036015.1	5.48e-53	97.73	major pollen allergen Ole e 6-like [Cucumis melo var. makuwa]	[more]
KAE8637567.1	6.94e-16	46.07	hypothetical protein CSA_017844, partial [Cucumis sativus]	[more]
KAG6595593.1	1.93e-11	47.13	hypothetical protein SDJN03_12146, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6595587.1	3.02e-11	44.83	hypothetical protein SDJN03_12140, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of MELO.jh034551.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO.jh034551.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SXV7	5.79e-56	95.74	Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A5A7T3F9	2.65e-53	97.73	Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]

BLAST of MELO.jh034551.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036466	Pollen allergen ole e 6 superfamily	GENE3D	1.10.287.720	Pollen allergen ole e 6	coord: 51..94 e-value: 1.9E-10 score: 42.1
IPR036466	Pollen allergen ole e 6 superfamily	SUPERFAMILY	111388	Pollen allergen ole e 6	coord: 52..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO.jh034551.1.t1	MELO.jh034551.1.t1	mRNA