MELO.jh034238.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh034238.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionProtein kinase-like domain, Concanavalin A-like lectin/glucanase domain protein
Locationscaffold_mitochondria: 1601330 .. 1601450 (-)
RNA-Seq ExpressionMELO.jh034238.1
SyntenyMELO.jh034238.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
GATGGATGCCCGGGCATTGAGAAGGAAGGACGCTTTCAGAGGCGAAAGGCCATGGGGAGATCTCGTCTGTGATCCATGGATCTCCGATCGGGAAACCGTATCCAAGCTCCGTGGCTAGTCT

mRNA sequence

GATGGATGCCCGGGCATTGAGAAGGAAGGACGCTTTCAGAGGCGAAAGGCCATGGGGAGATCTCGTCTGTGATCCATGGATCTCCGATCGGGAAACCGTATCCAAGCTCCGTGGCTAGTCT

Coding sequence (CDS)

ATGGATGCCCGGGCATTGAGAAGGAAGGACGCTTTCAGAGGCGAAAGGCCATGGGGAGATCTCGTCTGTGATCCATGGATCTCCGATCGGGAAACCGTATCCAAGCTCCGTGGCTAG

Protein sequence

MDARALRRKDAFRGERPWGDLVCDPWISDRETVSKLRG
Homology
[Close]
BLAST of MELO.jh034238.1 vs. NCBI nr
Match: KAG4394557.1 (hypothetical protein GLYMA_20G058901v4 [Glycine max])

HSP 1 Score: 87.0 bits (214), Expect = 1.56e-21
Identity = 37/38 (97.37%), Postives = 37/38 (97.37%), Query Frame = 0 

Query: 1  MDARALRRKDAFRGERPWGDLVCDPWISDRETVSKLRG 38
          MDARALRRKDAFRGERPWGD VCDPWISDRETVSKLRG
Sbjct: 4  MDARALRRKDAFRGERPWGDTVCDPWISDRETVSKLRG 41

[Close]
BLAST of MELO.jh034238.1 vs. NCBI nr
Match: KNA11658.1 (hypothetical protein SOVF_133260, partial [Spinacia oleracea])

HSP 1 Score: 87.0 bits (214), Expect = 1.85e-21
Identity = 37/38 (97.37%), Postives = 37/38 (97.37%), Query Frame = 0 

Query: 1  MDARALRRKDAFRGERPWGDLVCDPWISDRETVSKLRG 38
          MDARALRRKDAFRGERPWGD VCDPWISDRETVSKLRG
Sbjct: 12 MDARALRRKDAFRGERPWGDTVCDPWISDRETVSKLRG 49

[Close]
BLAST of MELO.jh034238.1 vs. NCBI nr
Match: EYU40102.1 (hypothetical protein MIMGU_mgv1a018597mg, partial [Erythranthe guttata])

HSP 1 Score: 84.7 bits (208), Expect = 1.72e-20
Identity = 36/37 (97.30%), Postives = 36/37 (97.30%), Query Frame = 0 

Query: 2  DARALRRKDAFRGERPWGDLVCDPWISDRETVSKLRG 38
          DARALRRKDAFRGERPWGD VCDPWISDRETVSKLRG
Sbjct: 18 DARALRRKDAFRGERPWGDTVCDPWISDRETVSKLRG 54

[Close]
BLAST of MELO.jh034238.1 vs. NCBI nr
Match: AFK45228.1 (unknown [Medicago truncatula])

HSP 1 Score: 84.3 bits (207), Expect = 1.83e-20
Identity = 36/38 (94.74%), Postives = 36/38 (94.74%), Query Frame = 0 

Query: 1  MDARALRRKDAFRGERPWGDLVCDPWISDRETVSKLRG 38
          MDARALRRKDAF GERPWGD VCDPWISDRETVSKLRG
Sbjct: 4  MDARALRRKDAFGGERPWGDTVCDPWISDRETVSKLRG 41

[Close]
BLAST of MELO.jh034238.1 vs. NCBI nr
Match: GFD07739.1 (protein kinase-like domain, concanavalin A-like lectin/glucanase domain protein [Tanacetum cinerariifolium])

HSP 1 Score: 83.6 bits (205), Expect = 4.59e-20
Identity = 35/38 (92.11%), Postives = 36/38 (94.74%), Query Frame = 0 

Query: 1  MDARALRRKDAFRGERPWGDLVCDPWISDRETVSKLRG 38
          MDARALRRKDAFRGER WGD +CDPWISDRETVSKLRG
Sbjct: 14 MDARALRRKDAFRGERTWGDTICDPWISDRETVSKLRG 51

[Close]
BLAST of MELO.jh034238.1 vs. ExPASy TrEMBL
Match: A0A803QUQ8 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 7.56e-22
Identity = 37/38 (97.37%), Postives = 37/38 (97.37%), Query Frame = 0 

Query: 1  MDARALRRKDAFRGERPWGDLVCDPWISDRETVSKLRG 38
          MDARALRRKDAFRGERPWGD VCDPWISDRETVSKLRG
Sbjct: 4  MDARALRRKDAFRGERPWGDTVCDPWISDRETVSKLRG 41

[Close]
BLAST of MELO.jh034238.1 vs. ExPASy TrEMBL
Match: A0A0K9QY86 (Uncharacterized protein (Fragment) OS=Spinacia oleracea OX=3562 GN=SOVF_133260 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 8.96e-22
Identity = 37/38 (97.37%), Postives = 37/38 (97.37%), Query Frame = 0 

Query: 1  MDARALRRKDAFRGERPWGDLVCDPWISDRETVSKLRG 38
          MDARALRRKDAFRGERPWGD VCDPWISDRETVSKLRG
Sbjct: 12 MDARALRRKDAFRGERPWGDTVCDPWISDRETVSKLRG 49

[Close]
BLAST of MELO.jh034238.1 vs. ExPASy TrEMBL
Match: A0A022RI60 (Uncharacterized protein (Fragment) OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a018597mg PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 8.31e-21
Identity = 36/37 (97.30%), Postives = 36/37 (97.30%), Query Frame = 0 

Query: 2  DARALRRKDAFRGERPWGDLVCDPWISDRETVSKLRG 38
          DARALRRKDAFRGERPWGD VCDPWISDRETVSKLRG
Sbjct: 18 DARALRRKDAFRGERPWGDTVCDPWISDRETVSKLRG 54

[Close]
BLAST of MELO.jh034238.1 vs. ExPASy TrEMBL
Match: I3SY86 (Uncharacterized protein OS=Medicago truncatula OX=3880 PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 8.87e-21
Identity = 36/38 (94.74%), Postives = 36/38 (94.74%), Query Frame = 0 

Query: 1  MDARALRRKDAFRGERPWGDLVCDPWISDRETVSKLRG 38
          MDARALRRKDAF GERPWGD VCDPWISDRETVSKLRG
Sbjct: 4  MDARALRRKDAFGGERPWGDTVCDPWISDRETVSKLRG 41

[Close]
BLAST of MELO.jh034238.1 vs. ExPASy TrEMBL
Match: A0A699TEJ7 (Protein kinase-like domain, concanavalin A-like lectin/glucanase domain protein (Fragment) OS=Tanacetum cinerariifolium OX=118510 GN=Tci_879708 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 2.22e-20
Identity = 35/38 (92.11%), Postives = 36/38 (94.74%), Query Frame = 0 

Query: 1  MDARALRRKDAFRGERPWGDLVCDPWISDRETVSKLRG 38
          MDARALRRKDAFRGER WGD +CDPWISDRETVSKLRG
Sbjct: 14 MDARALRRKDAFRGERTWGDTICDPWISDRETVSKLRG 51

The following BLAST results are available for this feature:
BLAST of MELO.jh034238.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG4394557.11.56e-2197.37hypothetical protein GLYMA_20G058901v4 [Glycine max][more]
KNA11658.11.85e-2197.37hypothetical protein SOVF_133260, partial [Spinacia oleracea][more]
EYU40102.11.72e-2097.30hypothetical protein MIMGU_mgv1a018597mg, partial [Erythranthe guttata][more]
AFK45228.11.83e-2094.74unknown [Medicago truncatula][more]
GFD07739.14.59e-2092.11protein kinase-like domain, concanavalin A-like lectin/glucanase domain protein ... [more]
BLAST of MELO.jh034238.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO.jh034238.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A803QUQ87.56e-2297.37Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A0K9QY868.96e-2297.37Uncharacterized protein (Fragment) OS=Spinacia oleracea OX=3562 GN=SOVF_133260 P... [more]
A0A022RI608.31e-2197.30Uncharacterized protein (Fragment) OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a... [more]
I3SY868.87e-2194.74Uncharacterized protein OS=Medicago truncatula OX=3880 PE=2 SV=1[more]
A0A699TEJ72.22e-2092.11Protein kinase-like domain, concanavalin A-like lectin/glucanase domain protein ... [more]
BLAST of MELO.jh034238.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh034238.1.t1MELO.jh034238.1.t1mRNA