MELO.jh034228.1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh034228.1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Ribosomal protein L5
Location	scaffold_mitochondria: 1593217 .. 1594169 (-)
RNA-Seq Expression	MELO.jh034228.1
Synteny	MELO.jh034228.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTCCGAGCCAACAACTCCAGTTTCATTACGAAGATATATCACGTCAGGATCCGTTGCTCAAACAGAATCACACCAACGTTATGGAAGTTCCTGGATCGTCTTCAATAAGAGTCGTGCCAAAGGAACCCTATGATTTCAGAAGAAAAAATGGAAAATTGGCTATGGAGATTCTGCGCGGTCAGAAATTGATACAGACAAGGGGTTCGACAGGAAAGTCCTTTCGATCCAATCCATTCTTGGAGTCAAATAAAGACAAAGGATATGTCAGTGACCTAGCACGAGAAAGCACTCTCCGAGGGCATGAAATGTCTAATTTTTCTTTCAAAATCATTATAGGAATAGTAATGTCTTTCTTAAATTCTCCGGCCGAAATACGGGAAAACTCCATGAAATTCTCGATGGAAACGGAGTTTTTCGAATTCTTCCCGGAACTGGCAGATCATTTCGAGATCTTCTCTAAGACTCTAGGGTTCAATGTGACTATTGTCACTTCGGCCAAGACACAAGATGAGACTTTACCACCGTGGAGCGGCTTTTTGAAAAAAAAATGGAATTTGAAAAAAAGAAAAGATTGAAGCTGAAATCCAACTTCTTCTTGAAATAAAGAACTCGCACACACTAGATTTCTTGGATTCCAAAAAAAATCAATACACCAGCTTAGATTTCTTGGATTTCTTTTTTTCGCAAATTCTTTGCTCATCTGGAGTAGCTTAATTAGTGGAGTTGAGATGAACAAGGGCCTAGGCGCCAGTAACCCAAAGAAATGAAAGAAGAGCTTACTTATTTGATTCATTTCCTATCTAGGAGTCCTCAAACAAAGTTCCATTCGAGATTGGACTAAGAAGGAAGAAGGCGAGTCAGTATGCTAATGCCTCATCCTCAAATCAATCCTTCCCATAGGTTATTGTCCCAACGAATAAGTAATTGTAGGAGTGAAAGCTTCATATAA

mRNA sequence

ATGGGTCCGAGCCAACAACTCCAGTTTCATTACGAAGATATATCACGTCAGGATCCGTTGCTCAAACAGAATCACACCAACGTTATGGAAGTTCCTGGATCGTCTTCAATAAGAGTCGTGCCAAAGGAACCCTATGATTTCAGAAGAAAAAATGGAAAATTGGCTATGGAGATTCTGCGCGGTCAGAAATTGATACAGACAAGGGGTTCGACAGGAAAGTCCTTTCGATCCAATCCATTCTTGGAGTCAAATAAAGACAAAGGATATGTCAGTGACCTAGCACGAGAAAGCACTCTCCGAGGGCATGAAATGTCTAATTTTTCTTTCAAAATCATTATAGGAATAGTAATGTCTTTCTTAAATTCTCCGGCCGAAATACGGGAAAACTCCATGAAATTCTCGATGGAAACGGAGTTTTTCGAATTCTTCCCGGAACTGGCAGATCATTTCGAGATCTTCTCTAAGACTCTAGGGTTCAATGTGACTATTGTCACTTCGGCCAAGACACAAGATGAGACTTTACCACCGTTATTGTCCCAACGAATAAGTAATTGTAGGAGTGAAAGCTTCATATAA

Coding sequence (CDS)

ATGGGTCCGAGCCAACAACTCCAGTTTCATTACGAAGATATATCACGTCAGGATCCGTTGCTCAAACAGAATCACACCAACGTTATGGAAGTTCCTGGATCGTCTTCAATAAGAGTCGTGCCAAAGGAACCCTATGATTTCAGAAGAAAAAATGGAAAATTGGCTATGGAGATTCTGCGCGGTCAGAAATTGATACAGACAAGGGGTTCGACAGGAAAGTCCTTTCGATCCAATCCATTCTTGGAGTCAAATAAAGACAAAGGATATGTCAGTGACCTAGCACGAGAAAGCACTCTCCGAGGGCATGAAATGTCTAATTTTTCTTTCAAAATCATTATAGGAATAGTAATGTCTTTCTTAAATTCTCCGGCCGAAATACGGGAAAACTCCATGAAATTCTCGATGGAAACGGAGTTTTTCGAATTCTTCCCGGAACTGGCAGATCATTTCGAGATCTTCTCTAAGACTCTAGGGTTCAATGTGACTATTGTCACTTCGGCCAAGACACAAGATGAGACTTTACCACCGTTATTGTCCCAACGAATAAGTAATTGTAGGAGTGAAAGCTTCATATAA

Protein sequence

MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILRGQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPAEIRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPPLLSQRISNCRSESFI

Homology

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BLAST of MELO.jh034228.1 vs. NCBI nr
Match: AEN56134.1 (ribosomal protein L5 [Cucumis melo subsp. melo] >AZP40310.1 ribosomal protein L5 [Cucumis melo var. momordica])

HSP 1 Score: 349 bits (896), Expect = 9.02e-121
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0


Query: 1   MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR 60
           MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR
Sbjct: 1   MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR 60

Query: 61  GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFL 120
           GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFL
Sbjct: 61  GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFL 120

Query: 121 NSPAEIRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPP 176
           NSPAEIRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPP
Sbjct: 121 NSPAEIRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPP 176

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BLAST of MELO.jh034228.1 vs. NCBI nr
Match: KAA0034876.1 (ribosomal protein L5 [Cucumis melo var. makuwa])

HSP 1 Score: 349 bits (896), Expect = 4.72e-120
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0


Query: 1   MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR 60
           MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR
Sbjct: 48  MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR 107

Query: 61  GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFL 120
           GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFL
Sbjct: 108 GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFL 167

Query: 121 NSPAEIRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPP 176
           NSPAEIRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPP
Sbjct: 168 NSPAEIRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPP 223

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BLAST of MELO.jh034228.1 vs. NCBI nr
Match: YP_004849341.1 (ribosomal protein L5 [Cucumis sativus] >ADZ10768.1 ribosomal protein L5 [Cucumis sativus])

HSP 1 Score: 315 bits (806), Expect = 5.40e-107
Identity = 158/176 (89.77%), Postives = 166/176 (94.32%), Query Frame = 0


Query: 1   MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR 60
           MGPS QLQFHYEDISRQ+PLLK N+TNVMEVPGSS IRVVPKEPYDFR KNGKLAMEILR
Sbjct: 1   MGPSLQLQFHYEDISRQEPLLKLNYTNVMEVPGSSEIRVVPKEPYDFRSKNGKLAMEILR 60

Query: 61  GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFL 120
           GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGH M +F FKIIIGIV+SFL
Sbjct: 61  GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHSMFHFFFKIIIGIVLSFL 120

Query: 121 NSPAEIRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPP 176
           NSP EIR+NS++F METEFFEFFPELADHFEIFS TLGF+VTIVTSAKTQDETLPP
Sbjct: 121 NSPGEIRKNSIQFPMETEFFEFFPELADHFEIFSNTLGFHVTIVTSAKTQDETLPP 176

[Close]

BLAST of MELO.jh034228.1 vs. NCBI nr
Match: AAP33159.1 (ribosomal protein L5 [Cucumis sativus] >AAP33161.1 ribosomal protein L5 [Cucumis sativus] >AAP33162.1 ribosomal protein L5 [Cucumis sativus])

HSP 1 Score: 300 bits (768), Expect = 3.32e-101
Identity = 153/174 (87.93%), Postives = 161/174 (92.53%), Query Frame = 0


Query: 1   MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR 60
           MGPS QLQFHYEDI RQ+ LLK N+TNVMEVPGSS IRVVPKEPYDFR KNGKLAMEIL 
Sbjct: 1   MGPSLQLQFHYEDILRQELLLKLNYTNVMEVPGSSEIRVVPKEPYDFRSKNGKLAMEILC 60

Query: 61  GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFL 120
           GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGH M +F FKIIIGIV+SFL
Sbjct: 61  GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHSMFHFFFKIIIGIVLSFL 120

Query: 121 NSPAEIRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETL 174
           NSP EIR+NS++F METEFFEFFPELADHFEIFS TLGF+VTIVTSAKTQDETL
Sbjct: 121 NSPGEIRKNSIQFPMETEFFEFFPELADHFEIFSNTLGFHVTIVTSAKTQDETL 174

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BLAST of MELO.jh034228.1 vs. NCBI nr
Match: YP_009913650.1 (ribosomal protein L5 [Luffa acutangula] >QLJ93020.1 ribosomal protein L5 [Luffa acutangula])

HSP 1 Score: 265 bits (676), Expect = 2.33e-87
Identity = 139/171 (81.29%), Postives = 145/171 (84.80%), Query Frame = 0


Query: 7   LQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILRGQKLIQ 66
           L FHYED+SRQDPLLK NH NVMEVPGS  IRVVPK PYDF  KNGKLAMEI RGQK IQ
Sbjct: 4   LDFHYEDVSRQDPLLKLNHANVMEVPGSCEIRVVPKAPYDFIIKNGKLAMEIPRGQKFIQ 63

Query: 67  T-RGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPAE 126
           T RGSTGKSFRSNPFLESNKDKGYVSDLAR+STLRGH MSNFS +I    VMS L+SP E
Sbjct: 64  TQRGSTGKSFRSNPFLESNKDKGYVSDLARQSTLRGHGMSNFSVRI--STVMSLLDSPVE 123

Query: 127 IRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPP 176
           IRENS++FSMETEF EF PEL DHFEIF   LGFNVTIVTSA TQDETLPP
Sbjct: 124 IRENSIQFSMETEFCEFSPELEDHFEIFEHILGFNVTIVTSANTQDETLPP 172

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BLAST of MELO.jh034228.1 vs. ExPASy Swiss-Prot
Match: P42793 (60S ribosomal protein L5, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPL5 PE=1 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 3.6e-60
Identity = 125/169 (73.96%), Postives = 136/169 (80.47%), Query Frame = 0


Query: 7   LQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILRGQKLIQ 66
           L FHYED+ RQD LLK N+ NVMEVPG   IRVVPK PY+F  KNGKLAMEI  GQK IQ
Sbjct: 4   LNFHYEDVLRQDLLLKLNYANVMEVPGLCEIRVVPKAPYNFIIKNGKLAMEIPCGQKFIQ 63

Query: 67  T-RGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPAE 126
           T RGSTGKSFRSNPFL SNKDKGYVSDLAR+STLRGH MSNF  +I+   VMS L+ P E
Sbjct: 64  TQRGSTGKSFRSNPFLGSNKDKGYVSDLARQSTLRGHGMSNFLVRIL--TVMSLLDFPVE 123

Query: 127 IRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETL 175
           IR+NS++FSMETEF EF PEL DHFEIF    GFNVTI+TSA TQDETL
Sbjct: 124 IRKNSIQFSMETEFCEFSPELEDHFEIFEHIRGFNVTIITSANTQDETL 170

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BLAST of MELO.jh034228.1 vs. ExPASy Swiss-Prot
Match: Q05492 (60S ribosomal protein L5, mitochondrial OS=Oenothera berteroana OX=3950 GN=RPL5 PE=2 SV=2)

HSP 1 Score: 228.4 bits (581), Expect = 6.8e-59
Identity = 127/171 (74.27%), Postives = 135/171 (78.95%), Query Frame = 0


Query: 7   LQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPK--EPYDFRRKNGKLAMEILRGQKL 66
           L FHYED+ RQD LLK N  NVMEVPG   IR+VPK    YDF  KNGKLAMEILRGQK 
Sbjct: 4   LNFHYEDVLRQDLLLKLNLANVMEVPGLCEIRIVPKTSSTYDFIIKNGKLAMEILRGQKF 63

Query: 67  IQT-RGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSP 126
           IQT RGSTGKSFRSNPFLESNKDKGYVSDLAR+S LRGH MSNF  +I+   VMS L+S 
Sbjct: 64  IQTERGSTGKSFRSNPFLESNKDKGYVSDLARQSILRGHGMSNFLVRIL--TVMSLLDSR 123

Query: 127 AEIRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETL 175
            EIRENS++FSMETEF EF PEL DHFEIF     FNVTIVTSA TQDETL
Sbjct: 124 VEIRENSIQFSMETEFCEFSPELEDHFEIFEHIRRFNVTIVTSANTQDETL 172

[Close]

BLAST of MELO.jh034228.1 vs. ExPASy Swiss-Prot
Match: P49388 (60S ribosomal protein L5, mitochondrial OS=Brassica napus OX=3708 GN=RPL5 PE=3 SV=2)

HSP 1 Score: 226.5 bits (576), Expect = 2.6e-58
Identity = 122/170 (71.76%), Postives = 134/170 (78.82%), Query Frame = 0


Query: 7   LQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILRGQKLIQ 66
           L FHYED+SRQDPLL +    + +  GS  IRVVP  PY+F  KNGKLAMEI RGQK IQ
Sbjct: 4   LNFHYEDVSRQDPLLNRITPTLWKFLGSCEIRVVPNGPYNFIIKNGKLAMEIPRGQKFIQ 63

Query: 67  T-RGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPAE 126
           T RGSTGKSFRSNPFL SNKDKGYVSDLAR+STLRGH MSNFS +  I  VMS L+ P E
Sbjct: 64  TQRGSTGKSFRSNPFLGSNKDKGYVSDLARQSTLRGHGMSNFSVR--ISTVMSLLDFPVE 123

Query: 127 IRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLP 176
           IR+NS++FSMETEF EF P+L DHFEIF    GFNVTIVTSA TQDETLP
Sbjct: 124 IRKNSIQFSMETEFCEFAPQLQDHFEIFEHIRGFNVTIVTSANTQDETLP 171

[Close]

BLAST of MELO.jh034228.1 vs. ExPASy Swiss-Prot
Match: P51409 (60S ribosomal protein L5, mitochondrial OS=Solanum tuberosum OX=4113 GN=RPL5 PE=2 SV=2)

HSP 1 Score: 206.5 bits (524), Expect = 2.8e-52
Identity = 120/169 (71.01%), Postives = 128/169 (75.74%), Query Frame = 0


Query: 7   LQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILRGQKLIQ 66
           L FHYED+ RQD LLK N+ NVMEVPG   I VVPK       KNGKLAMEI  GQKL Q
Sbjct: 8   LYFHYEDVLRQDLLLKLNYANVMEVPGLCKIIVVPKTAPSI--KNGKLAMEISCGQKLKQ 67

Query: 67  TRGSTGKSFRSNPFLESNKD-KGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPAE 126
            R STGKSFRSNPFL SNKD KGYVSDLAR+STLRGH MS+F  +  I  VMS L+SP E
Sbjct: 68  -RASTGKSFRSNPFLGSNKDKKGYVSDLARQSTLRGHGMSHFLVR--ISTVMSLLDSPLE 127

Query: 127 IRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETL 175
           IRE S++FSMETEF EF PEL DHFEIF    GFNVTIVTSA TQDETL
Sbjct: 128 IRERSIQFSMETEFCEFSPELEDHFEIFEHIRGFNVTIVTSANTQDETL 171

[Close]

BLAST of MELO.jh034228.1 vs. ExPASy Swiss-Prot
Match: P26860 (60S ribosomal protein L5, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPL5 PE=3 SV=2)

HSP 1 Score: 165.6 bits (418), Expect = 5.4e-40
Identity = 98/174 (56.32%), Postives = 121/174 (69.54%), Query Frame = 0


Query: 6   QLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILRGQKLI 65
           +L+FHY  + R D LLK N+ N+MEVP    I VVPK P +F  KN KLAMEI+ GQK I
Sbjct: 8   RLEFHYNQVIRPDLLLKINYENIMEVPRLCKIIVVPKAPSNF-IKNVKLAMEIVCGQKFI 67

Query: 66  QT--RGSTGKSFRSNPFL---ESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFL 125
           QT  RGSTGKSFR N F+   ES +D GYV+ LAR STLRGH M NF  K++   ++SF 
Sbjct: 68  QTRSRGSTGKSFRFNKFVLNQESKRDTGYVTYLAR-STLRGHIMYNFLEKLV--TIISFY 127

Query: 126 NSPAEIRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETL 175
           + P +I++NS++ SM T     FPE+ DHFEIF    GF+VTIVTSA TQDET+
Sbjct: 128 DYPVKIQKNSIQLSMATSLLRLFPEIQDHFEIFEHIRGFDVTIVTSANTQDETV 177

[Close]

BLAST of MELO.jh034228.1 vs. ExPASy TrEMBL
Match: G3EU44 (Ribosomal protein L5 OS=Cucumis melo subsp. melo OX=412675 GN=rpl5 PE=3 SV=1)

HSP 1 Score: 349 bits (896), Expect = 4.37e-121
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0


Query: 1   MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR 60
           MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR
Sbjct: 1   MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR 60

Query: 61  GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFL 120
           GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFL
Sbjct: 61  GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFL 120

Query: 121 NSPAEIRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPP 176
           NSPAEIRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPP
Sbjct: 121 NSPAEIRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPP 176

[Close]

BLAST of MELO.jh034228.1 vs. ExPASy TrEMBL
Match: A0A3S9JIG3 (Ribosomal protein L5 OS=Cucumis melo var. momordica OX=2034244 GN=rpl5 PE=3 SV=1)

HSP 1 Score: 349 bits (896), Expect = 4.37e-121
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0


Query: 1   MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR 60
           MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR
Sbjct: 1   MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR 60

Query: 61  GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFL 120
           GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFL
Sbjct: 61  GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFL 120

Query: 121 NSPAEIRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPP 176
           NSPAEIRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPP
Sbjct: 121 NSPAEIRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPP 176

[Close]

BLAST of MELO.jh034228.1 vs. ExPASy TrEMBL
Match: A0A5A7SYB1 (Ribosomal protein L5 (Mitochondrion) OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold48303G00010 PE=3 SV=1)

HSP 1 Score: 349 bits (896), Expect = 2.28e-120
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0


Query: 1   MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR 60
           MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR
Sbjct: 48  MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR 107

Query: 61  GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFL 120
           GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFL
Sbjct: 108 GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFL 167

Query: 121 NSPAEIRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPP 176
           NSPAEIRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPP
Sbjct: 168 NSPAEIRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPP 223

[Close]

BLAST of MELO.jh034228.1 vs. ExPASy TrEMBL
Match: G3EIZ3 (Ribosomal protein L5 OS=Cucumis sativus OX=3659 GN=rpl5 PE=3 SV=1)

HSP 1 Score: 315 bits (806), Expect = 2.61e-107
Identity = 158/176 (89.77%), Postives = 166/176 (94.32%), Query Frame = 0


Query: 1   MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR 60
           MGPS QLQFHYEDISRQ+PLLK N+TNVMEVPGSS IRVVPKEPYDFR KNGKLAMEILR
Sbjct: 1   MGPSLQLQFHYEDISRQEPLLKLNYTNVMEVPGSSEIRVVPKEPYDFRSKNGKLAMEILR 60

Query: 61  GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFL 120
           GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGH M +F FKIIIGIV+SFL
Sbjct: 61  GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHSMFHFFFKIIIGIVLSFL 120

Query: 121 NSPAEIRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPP 176
           NSP EIR+NS++F METEFFEFFPELADHFEIFS TLGF+VTIVTSAKTQDETLPP
Sbjct: 121 NSPGEIRKNSIQFPMETEFFEFFPELADHFEIFSNTLGFHVTIVTSAKTQDETLPP 176

[Close]

BLAST of MELO.jh034228.1 vs. ExPASy TrEMBL
Match: Q7Y6H0 (Ribosomal protein L5 OS=Cucumis sativus OX=3659 GN=rpl5 PE=3 SV=1)

HSP 1 Score: 300 bits (768), Expect = 1.61e-101
Identity = 153/174 (87.93%), Postives = 161/174 (92.53%), Query Frame = 0


Query: 1   MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR 60
           MGPS QLQFHYEDI RQ+ LLK N+TNVMEVPGSS IRVVPKEPYDFR KNGKLAMEIL 
Sbjct: 1   MGPSLQLQFHYEDILRQELLLKLNYTNVMEVPGSSEIRVVPKEPYDFRSKNGKLAMEILC 60

Query: 61  GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFL 120
           GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGH M +F FKIIIGIV+SFL
Sbjct: 61  GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHSMFHFFFKIIIGIVLSFL 120

Query: 121 NSPAEIRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETL 174
           NSP EIR+NS++F METEFFEFFPELADHFEIFS TLGF+VTIVTSAKTQDETL
Sbjct: 121 NSPGEIRKNSIQFPMETEFFEFFPELADHFEIFSNTLGFHVTIVTSAKTQDETL 174

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BLAST of MELO.jh034228.1 vs. TAIR 10
Match: AT2G07725.1 (Ribosomal L5P family protein )

HSP 1 Score: 251.5 bits (641), Expect = 5.3e-67
Identity = 132/170 (77.65%), Postives = 141/170 (82.94%), Query Frame = 0


Query: 7   LQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILRGQKLIQ 66
           L FHYED+SRQDPLLK NH NVMEVPGS  IRVVPK PY+F  KNGKLAMEI RGQK IQ
Sbjct: 4   LNFHYEDVSRQDPLLKPNHANVMEVPGSCEIRVVPKAPYNFIIKNGKLAMEIPRGQKFIQ 63

Query: 67  T-RGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPAE 126
           T RGSTGKSFRSNPFL SNKDKGYVSDLAR+STLRGH MSNFS +  I  VMS L+ P E
Sbjct: 64  TQRGSTGKSFRSNPFLGSNKDKGYVSDLARQSTLRGHGMSNFSVR--ISTVMSLLDFPVE 123

Query: 127 IRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLP 176
           IR+NS++FSMETEF EF PEL DHFEIF    GFNVTI+TSA TQDETLP
Sbjct: 124 IRKNSIQFSMETEFCEFSPELEDHFEIFEHIRGFNVTIITSANTQDETLP 171

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BLAST of MELO.jh034228.1 vs. TAIR 10
Match: ATMG00210.1 (ribosomal protein L5 )

HSP 1 Score: 251.5 bits (641), Expect = 5.3e-67
Identity = 132/170 (77.65%), Postives = 141/170 (82.94%), Query Frame = 0


Query: 7   LQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILRGQKLIQ 66
           L FHYED+SRQDPLLK NH NVMEVPGS  IRVVPK PY+F  KNGKLAMEI RGQK IQ
Sbjct: 4   LNFHYEDVSRQDPLLKPNHANVMEVPGSCEIRVVPKAPYNFIIKNGKLAMEIPRGQKFIQ 63

Query: 67  T-RGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPAE 126
           T RGSTGKSFRSNPFL SNKDKGYVSDLAR+STLRGH MSNFS +  I  VMS L+ P E
Sbjct: 64  TQRGSTGKSFRSNPFLGSNKDKGYVSDLARQSTLRGHGMSNFSVR--ISTVMSLLDFPVE 123

Query: 127 IRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLP 176
           IR+NS++FSMETEF EF PEL DHFEIF    GFNVTI+TSA TQDETLP
Sbjct: 124 IRKNSIQFSMETEFCEFSPELEDHFEIFEHIRGFNVTIITSANTQDETLP 171

The following BLAST results are available for this feature:

BLAST of MELO.jh034228.1 vs. NCBI nr


Match Name	E-value	Identity	Description
AEN56134.1	9.02e-121	100.00	ribosomal protein L5 [Cucumis melo subsp. melo] >AZP40310.1 ribosomal protein L5...	[more]
KAA0034876.1	4.72e-120	100.00	ribosomal protein L5 [Cucumis melo var. makuwa]	[more]
YP_004849341.1	5.40e-107	89.77	ribosomal protein L5 [Cucumis sativus] >ADZ10768.1 ribosomal protein L5 [Cucumis...	[more]
AAP33159.1	3.32e-101	87.93	ribosomal protein L5 [Cucumis sativus] >AAP33161.1 ribosomal protein L5 [Cucumis...	[more]
YP_009913650.1	2.33e-87	81.29	ribosomal protein L5 [Luffa acutangula] >QLJ93020.1 ribosomal protein L5 [Luffa ...	[more]

BLAST of MELO.jh034228.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42793	3.6e-60	73.96	60S ribosomal protein L5, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPL5 ...	[more]
Q05492	6.8e-59	74.27	60S ribosomal protein L5, mitochondrial OS=Oenothera berteroana OX=3950 GN=RPL5 ...	[more]
P49388	2.6e-58	71.76	60S ribosomal protein L5, mitochondrial OS=Brassica napus OX=3708 GN=RPL5 PE=3 S...	[more]
P51409	2.8e-52	71.01	60S ribosomal protein L5, mitochondrial OS=Solanum tuberosum OX=4113 GN=RPL5 PE=...	[more]
P26860	5.4e-40	56.32	60S ribosomal protein L5, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPL5...	[more]

BLAST of MELO.jh034228.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
G3EU44	4.37e-121	100.00	Ribosomal protein L5 OS=Cucumis melo subsp. melo OX=412675 GN=rpl5 PE=3 SV=1	[more]
A0A3S9JIG3	4.37e-121	100.00	Ribosomal protein L5 OS=Cucumis melo var. momordica OX=2034244 GN=rpl5 PE=3 SV=1	[more]
A0A5A7SYB1	2.28e-120	100.00	Ribosomal protein L5 (Mitochondrion) OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
G3EIZ3	2.61e-107	89.77	Ribosomal protein L5 OS=Cucumis sativus OX=3659 GN=rpl5 PE=3 SV=1	[more]
Q7Y6H0	1.61e-101	87.93	Ribosomal protein L5 OS=Cucumis sativus OX=3659 GN=rpl5 PE=3 SV=1	[more]

BLAST of MELO.jh034228.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G07725.1	5.3e-67	77.65	Ribosomal L5P family protein	[more]
ATMG00210.1	5.3e-67	77.65	ribosomal protein L5	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022803	Ribosomal protein L5 domain superfamily	GENE3D	3.30.1440.10		coord: 6..180 e-value: 7.4E-20 score: 73.3
IPR022803	Ribosomal protein L5 domain superfamily	SUPERFAMILY	55282	RL5-like	coord: 5..175
IPR002132	Ribosomal protein L5	PIRSF	PIRSF002161	RPL5p_RPL5a_RPL11e_RPL5o	coord: 2..190 e-value: 4.4E-25 score: 86.1
IPR002132	Ribosomal protein L5	PANTHER	PTHR11994	60S RIBOSOMAL PROTEIN L11-RELATED	coord: 5..176
None	No IPR available	PANTHER	PTHR11994:SF11	60S RIBOSOMAL PROTEIN L5, MITOCHONDRIAL	coord: 5..176

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO.jh034228.1.t1	MELO.jh034228.1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome