MELO.jh034110.1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh034110.1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	P-loop containing nucleoside triphosphate hydrolases superfamily protein
Location	chr12: 25523003 .. 25524426 (-)
RNA-Seq Expression	MELO.jh034110.1
Synteny	MELO.jh034110.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTTTATTGTGATGACTTGCAGTCCTTATGCCATGGGGATGACCTTAAAGAAAGTGGAATTCAGGAGGTAATTTTTTTTTTTTTTGGTAGTGAAATTTTGAAATAACCTTATCTATATTAGTGCGATTTATGCATGTCATGTCCGTCTGCCAGGTTGACATGAATATGGAAGATGAAGACGATGGTAGTCCTAGTTTTCAAGAAACGATCTCAGAGAAGACTGCATTACCTTCTCTAAGACATGATGCCTCTGAAGGTCAGTAAAATGATTGAAAAAAATATATATATATTTTTCAGGAGTTCGTCCGGTACTTAAAAAATTTTCAGTTAGTGGTAGGCTAACAGCACATCATTACCTGCTTTGGCTCATCTTCTGTCATCTCATTTAGTTTTCTTCGGCTCAACAGATTTCAGATTTTGGTTTCTCACATCATATTGTTCTGCAGATGATGAGAAGAGATGGGATGCAGAACCGGACCATCTGAGAGAGGAAGTAAAGGAGTTAGGTAGAGTAAATGGTCAAATGATTTAGATGATGACGATACAGAAAAAATTGATGGCCGGAACGGTCATTCAAATGCTCTTTCTGGACTGATTCAAGCTTACGCCAAAGAAGGAAAGTCGGTGCTGGATGGACCAGGTTTGCATTGAGCTTATTTTCTCCCTACTGATGGGCCATCTGAAATTTTCTTTAATGAAAAGCATGCCAAATGTATCAACTTTTCATGTACACAAGTCTGCTTTTCCTTTAATATTACACCACTCCTTTTTCCAGGTTCGTAATACCGGATTCTCAATCGGCGCCGCAAAAAAGGCAAACAGATTATCTTTAGTAATCGGTCCTGGTCCTGGATATAACCTGGTTAGTCATCTGATTCCATTTGTGAAACTAAAATCTTGTGTCGTGGAATTATGAATTAGTTGCCTGTAGCAACATGAACTTACTATGAAGGAAGTAGTTTCAAGAATCAGAAAAGTGTTCATTCTCATTTGATATAAAATTGCAGAAATCCAACCCATTAGCAGAAGAAGAATATCGTGGCTCAACCCAAAACAACAGCAACGAGTCAAAGAAGCACAGCAGATTTGAAGAGCGATTGCGTGCAGAAAGTGAATCATTCAAAGTCGTCTTCGATAAAAGACGACAAAGGATAGGAGGACTTGATTGGGAAGAGGAATAGGGATTGGTCAAGAAGCATAAAGTTTGGATATGGAAGCATACATTATTCCTTTTTTTACACATTTTCTGAGAGGAGATTTTGATCTCAATTCAGAATGGTAACTTCTTTTTGCTCCCAATCTAAACATCATTTGTTGACCATTTTGCTGGTCTCTTAGTTGTATAACGAATAATACTAATTATATGCATTTTGTTAGGAACCACTCAATTGTAAATTGAAATTATTCTTGAATTTTGTTCTGAA

mRNA sequence

TGTTTATTGTGATGACTTGCAGTCCTTATGCCATGGGGATGACCTTAAAGAAAGTGGAATTCAGGAGGTTGACATGAATATGGAAGATGAAGACGATGGTAGTCCTAGTTTTCAAGAAACGATCTCAGAGAAGACTGCATTACCTTCTCTAAGACATGATGCCTCTGAAGATGATGAGAAGAGATGGGATGCAGAACCGGACCATCTGAGAGAGGAAGTAAAGGAGTTAGGTAGAGTAAATGGTCAAATGATTTAGATGATGACGATACAGAAAAAATTGATGGCCGGAACGGTCATTCAAATGCTCTTTCTGGACTGATTCAAGCTTACGCCAAAGAAGGAAAGTCGGTGCTGGATGGACCAGGTTCGTAATACCGGATTCTCAATCGGCGCCGCAAAAAAGGCAAACAGATTATCTTTAGTAATCGGTCCTGGTCCTGGATATAACCTGAAATCCAACCCATTAGCAGAAGAAGAATATCGTGGCTCAACCCAAAACAACAGCAACGAGTCAAAGAAGCACAGCAGATTTGAAGAGCGATTGCGTGCAGAAAGTGAATCATTCAAAGTCGTCTTCGATAAAAGACGACAAAGGATAGGAGGACTTGATTGGGAAGAGGAATAGGGATTGGTCAAGAAGCATAAAGTTTGGATATGGAAGCATACATTATTCCTTTTTTTACACATTTTCTGAGAGGAGATTTTGATCTCAATTCAGAATGGTAACTTCTTTTTGCTCCCAATCTAAACATCATTTGTTGACCATTTTGCTGGTCTCTTAGTTGTATAACGAATAATACTAATTATATGCATTTTGTTAGGAACCACTCAATTGTAAATTGAAATTATTCTTGAATTTTGTTCTGAA

Coding sequence (CDS)

ATGGACCAGGTTCGTAATACCGGATTCTCAATCGGCGCCGCAAAAAAGGCAAACAGATTATCTTTAGTAATCGGTCCTGGTCCTGGATATAACCTGAAATCCAACCCATTAGCAGAAGAAGAATATCGTGGCTCAACCCAAAACAACAGCAACGAGTCAAAGAAGCACAGCAGATTTGAAGAGCGATTGCGTGCAGAAAGTGAATCATTCAAAGTCGTCTTCGATAAAAGACGACAAAGGATAGGAGGACTTGATTGGGAAGAGGAATAG

Protein sequence

MDQVRNTGFSIGAAKKANRLSLVIGPGPGYNLKSNPLAEEEYRGSTQNNSNESKKHSRFEERLRAESESFKVVFDKRRQRIGGLDWEEE

Homology

[Close]

BLAST of MELO.jh034110.1 vs. NCBI nr
Match: XP_008437571.1 (PREDICTED: uncharacterized protein LOC103482943 [Cucumis melo] >TYJ99101.1 uncharacterized protein E5676_scaffold248G003060 [Cucumis melo var. makuwa])

HSP 1 Score: 171 bits (434), Expect = 2.35e-47
Identity = 88/89 (98.88%), Postives = 89/89 (100.00%), Query Frame = 0


Query: 1   MDQVRNTGFSIGAAKKANRLSLVIGPGPGYNLKSNPLAEEEYRGSTQNNSNESKKHSRFE 60
           MDQVRN+GFSIGAAKKANRLSLVIGPGPGYNLKSNPLAEEEYRGSTQNNSNESKKHSRFE
Sbjct: 785 MDQVRNSGFSIGAAKKANRLSLVIGPGPGYNLKSNPLAEEEYRGSTQNNSNESKKHSRFE 844

Query: 61  ERLRAESESFKVVFDKRRQRIGGLDWEEE 89
           ERLRAESESFKVVFDKRRQRIGGLDWEEE
Sbjct: 845 ERLRAESESFKVVFDKRRQRIGGLDWEEE 873

[Close]

BLAST of MELO.jh034110.1 vs. NCBI nr
Match: XP_011651180.1 (uncharacterized protein LOC101218580 [Cucumis sativus] >KGN64252.1 hypothetical protein Csa_013201 [Cucumis sativus])

HSP 1 Score: 166 bits (421), Expect = 1.43e-45
Identity = 88/89 (98.88%), Postives = 88/89 (98.88%), Query Frame = 0


Query: 1   MDQVRNTGFSIGAAKKANRLSLVIGPGPGYNLKSNPLAEEEYRGSTQNNSNESKKHSRFE 60
           MDQVRNTGFSIGAAKKANRLSLVIGPGPGYNLKSNPLAEEEYRGSTQN SNESKKHSRFE
Sbjct: 787 MDQVRNTGFSIGAAKKANRLSLVIGPGPGYNLKSNPLAEEEYRGSTQN-SNESKKHSRFE 846

Query: 61  ERLRAESESFKVVFDKRRQRIGGLDWEEE 89
           ERLRAESESFKVVFDKRRQRIGGLDWEEE
Sbjct: 847 ERLRAESESFKVVFDKRRQRIGGLDWEEE 874

[Close]

BLAST of MELO.jh034110.1 vs. NCBI nr
Match: XP_038894607.1 (uncharacterized protein LOC120083122 [Benincasa hispida])

HSP 1 Score: 152 bits (384), Expect = 1.58e-40
Identity = 81/89 (91.01%), Postives = 84/89 (94.38%), Query Frame = 0


Query: 1   MDQVRNTGFSIGAAKKANRLSLVIGPGPGYNLKSNPLAEEEYRGSTQNNSNESKKHSRFE 60
           MDQV NTGFSIGA KKANRLSLVIGPG GYNL+SNPLAEEEYRGSTQN SNE+KKHSRFE
Sbjct: 784 MDQVGNTGFSIGATKKANRLSLVIGPGAGYNLESNPLAEEEYRGSTQN-SNETKKHSRFE 843

Query: 61  ERLRAESESFKVVFDKRRQRIGGLDWEEE 89
           ERLRAES SFKVVFDKRRQRIGGLDWEE+
Sbjct: 844 ERLRAESLSFKVVFDKRRQRIGGLDWEED 871

[Close]

BLAST of MELO.jh034110.1 vs. NCBI nr
Match: XP_022994572.1 (uncharacterized protein LOC111490251 [Cucurbita maxima])

HSP 1 Score: 145 bits (365), Expect = 5.95e-38
Identity = 80/90 (88.89%), Postives = 82/90 (91.11%), Query Frame = 0


Query: 1   MDQVRNTGFSIGAAKKANRLSLVIGPGPGYNLKSNPLAEE-EYRGSTQNNSNESKKHSRF 60
           +DQ   TGFSIGAAKKANRLSLVIGPG GYNLKSNPL EE +YRGS QN SNESKKHSRF
Sbjct: 778 IDQAGYTGFSIGAAKKANRLSLVIGPGAGYNLKSNPLPEEYQYRGSNQN-SNESKKHSRF 837

Query: 61  EERLRAESESFKVVFDKRRQRIGGLDWEEE 89
           EERLRAESESFKVVFDKRRQRIGGLDWEEE
Sbjct: 838 EERLRAESESFKVVFDKRRQRIGGLDWEEE 866

[Close]

BLAST of MELO.jh034110.1 vs. NCBI nr
Match: XP_022954980.1 (uncharacterized protein LOC111457077 [Cucurbita moschata])

HSP 1 Score: 145 bits (365), Expect = 5.95e-38
Identity = 80/90 (88.89%), Postives = 82/90 (91.11%), Query Frame = 0


Query: 1   MDQVRNTGFSIGAAKKANRLSLVIGPGPGYNLKSNPLAEE-EYRGSTQNNSNESKKHSRF 60
           +DQ   TGFSIGAAKKANRLSLVIGPG GYNLKSNPL EE +YRGS QN SNESKKHSRF
Sbjct: 779 IDQAGYTGFSIGAAKKANRLSLVIGPGAGYNLKSNPLPEEYQYRGSNQN-SNESKKHSRF 838

Query: 61  EERLRAESESFKVVFDKRRQRIGGLDWEEE 89
           EERLRAESESFKVVFDKRRQRIGGLDWEEE
Sbjct: 839 EERLRAESESFKVVFDKRRQRIGGLDWEEE 867

[Close]

BLAST of MELO.jh034110.1 vs. ExPASy TrEMBL
Match: A0A5D3BK41 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G003060 PE=4 SV=1)

HSP 1 Score: 171 bits (434), Expect = 1.14e-47
Identity = 88/89 (98.88%), Postives = 89/89 (100.00%), Query Frame = 0


Query: 1   MDQVRNTGFSIGAAKKANRLSLVIGPGPGYNLKSNPLAEEEYRGSTQNNSNESKKHSRFE 60
           MDQVRN+GFSIGAAKKANRLSLVIGPGPGYNLKSNPLAEEEYRGSTQNNSNESKKHSRFE
Sbjct: 785 MDQVRNSGFSIGAAKKANRLSLVIGPGPGYNLKSNPLAEEEYRGSTQNNSNESKKHSRFE 844

Query: 61  ERLRAESESFKVVFDKRRQRIGGLDWEEE 89
           ERLRAESESFKVVFDKRRQRIGGLDWEEE
Sbjct: 845 ERLRAESESFKVVFDKRRQRIGGLDWEEE 873

[Close]

BLAST of MELO.jh034110.1 vs. ExPASy TrEMBL
Match: A0A1S3AUX6 (uncharacterized protein LOC103482943 OS=Cucumis melo OX=3656 GN=LOC103482943 PE=4 SV=1)

HSP 1 Score: 171 bits (434), Expect = 1.14e-47
Identity = 88/89 (98.88%), Postives = 89/89 (100.00%), Query Frame = 0


Query: 1   MDQVRNTGFSIGAAKKANRLSLVIGPGPGYNLKSNPLAEEEYRGSTQNNSNESKKHSRFE 60
           MDQVRN+GFSIGAAKKANRLSLVIGPGPGYNLKSNPLAEEEYRGSTQNNSNESKKHSRFE
Sbjct: 785 MDQVRNSGFSIGAAKKANRLSLVIGPGPGYNLKSNPLAEEEYRGSTQNNSNESKKHSRFE 844

Query: 61  ERLRAESESFKVVFDKRRQRIGGLDWEEE 89
           ERLRAESESFKVVFDKRRQRIGGLDWEEE
Sbjct: 845 ERLRAESESFKVVFDKRRQRIGGLDWEEE 873

[Close]

BLAST of MELO.jh034110.1 vs. ExPASy TrEMBL
Match: A0A0A0LTZ2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045500 PE=4 SV=1)

HSP 1 Score: 166 bits (421), Expect = 6.92e-46
Identity = 88/89 (98.88%), Postives = 88/89 (98.88%), Query Frame = 0


Query: 1   MDQVRNTGFSIGAAKKANRLSLVIGPGPGYNLKSNPLAEEEYRGSTQNNSNESKKHSRFE 60
           MDQVRNTGFSIGAAKKANRLSLVIGPGPGYNLKSNPLAEEEYRGSTQN SNESKKHSRFE
Sbjct: 787 MDQVRNTGFSIGAAKKANRLSLVIGPGPGYNLKSNPLAEEEYRGSTQN-SNESKKHSRFE 846

Query: 61  ERLRAESESFKVVFDKRRQRIGGLDWEEE 89
           ERLRAESESFKVVFDKRRQRIGGLDWEEE
Sbjct: 847 ERLRAESESFKVVFDKRRQRIGGLDWEEE 874

[Close]

BLAST of MELO.jh034110.1 vs. ExPASy TrEMBL
Match: A0A6J1JW85 (uncharacterized protein LOC111490251 OS=Cucurbita maxima OX=3661 GN=LOC111490251 PE=4 SV=1)

HSP 1 Score: 145 bits (365), Expect = 2.88e-38
Identity = 80/90 (88.89%), Postives = 82/90 (91.11%), Query Frame = 0


Query: 1   MDQVRNTGFSIGAAKKANRLSLVIGPGPGYNLKSNPLAEE-EYRGSTQNNSNESKKHSRF 60
           +DQ   TGFSIGAAKKANRLSLVIGPG GYNLKSNPL EE +YRGS QN SNESKKHSRF
Sbjct: 778 IDQAGYTGFSIGAAKKANRLSLVIGPGAGYNLKSNPLPEEYQYRGSNQN-SNESKKHSRF 837

Query: 61  EERLRAESESFKVVFDKRRQRIGGLDWEEE 89
           EERLRAESESFKVVFDKRRQRIGGLDWEEE
Sbjct: 838 EERLRAESESFKVVFDKRRQRIGGLDWEEE 866

[Close]

BLAST of MELO.jh034110.1 vs. ExPASy TrEMBL
Match: A0A6J1GTW4 (uncharacterized protein LOC111457077 OS=Cucurbita moschata OX=3662 GN=LOC111457077 PE=4 SV=1)

HSP 1 Score: 145 bits (365), Expect = 2.88e-38
Identity = 80/90 (88.89%), Postives = 82/90 (91.11%), Query Frame = 0


Query: 1   MDQVRNTGFSIGAAKKANRLSLVIGPGPGYNLKSNPLAEE-EYRGSTQNNSNESKKHSRF 60
           +DQ   TGFSIGAAKKANRLSLVIGPG GYNLKSNPL EE +YRGS QN SNESKKHSRF
Sbjct: 779 IDQAGYTGFSIGAAKKANRLSLVIGPGAGYNLKSNPLPEEYQYRGSNQN-SNESKKHSRF 838

Query: 61  EERLRAESESFKVVFDKRRQRIGGLDWEEE 89
           EERLRAESESFKVVFDKRRQRIGGLDWEEE
Sbjct: 839 EERLRAESESFKVVFDKRRQRIGGLDWEEE 867

[Close]

BLAST of MELO.jh034110.1 vs. TAIR 10
Match: AT5G62760.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 75.5 bits (184), Expect = 2.4e-14
Identity = 43/80 (53.75%), Postives = 56/80 (70.00%), Query Frame = 0


Query: 2   DQVRNTGFSIGAAKKANRLSLVIGPGPGYNLKSNPLAEEEYRGSTQNNSNESKKHSRFEE 61
           D+  + GFSIGAA+  N  SL+IGPG GYN+KSNPL+ EE R +  +   ++K    F++
Sbjct: 578 DKGGDAGFSIGAARNMNMPSLIIGPGSGYNVKSNPLSAEESR-ALADAIGKAKVRGIFQD 637

Query: 62  RLRAESESFKVVFDKRRQRI 82
           +LRAE ESFK VFDKR  RI
Sbjct: 638 QLRAERESFKAVFDKRHVRI 656

[Close]

BLAST of MELO.jh034110.1 vs. TAIR 10
Match: AT5G62760.4 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 75.5 bits (184), Expect = 2.4e-14
Identity = 43/80 (53.75%), Postives = 56/80 (70.00%), Query Frame = 0


Query: 2   DQVRNTGFSIGAAKKANRLSLVIGPGPGYNLKSNPLAEEEYRGSTQNNSNESKKHSRFEE 61
           D+  + GFSIGAA+  N  SL+IGPG GYN+KSNPL+ EE R +  +   ++K    F++
Sbjct: 557 DKGGDAGFSIGAARNMNMPSLIIGPGSGYNVKSNPLSAEESR-ALADAIGKAKVRGIFQD 616

Query: 62  RLRAESESFKVVFDKRRQRI 82
           +LRAE ESFK VFDKR  RI
Sbjct: 617 QLRAERESFKAVFDKRHVRI 635

[Close]

BLAST of MELO.jh034110.1 vs. TAIR 10
Match: AT5G62760.3 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 75.5 bits (184), Expect = 2.4e-14
Identity = 43/80 (53.75%), Postives = 56/80 (70.00%), Query Frame = 0


Query: 2   DQVRNTGFSIGAAKKANRLSLVIGPGPGYNLKSNPLAEEEYRGSTQNNSNESKKHSRFEE 61
           D+  + GFSIGAA+  N  SL+IGPG GYN+KSNPL+ EE R +  +   ++K    F++
Sbjct: 561 DKGGDAGFSIGAARNMNMPSLIIGPGSGYNVKSNPLSAEESR-ALADAIGKAKVRGIFQD 620

Query: 62  RLRAESESFKVVFDKRRQRI 82
           +LRAE ESFK VFDKR  RI
Sbjct: 621 QLRAERESFKAVFDKRHVRI 639

The following BLAST results are available for this feature:

BLAST of MELO.jh034110.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008437571.1	2.35e-47	98.88	PREDICTED: uncharacterized protein LOC103482943 [Cucumis melo] >TYJ99101.1 uncha...	[more]
XP_011651180.1	1.43e-45	98.88	uncharacterized protein LOC101218580 [Cucumis sativus] >KGN64252.1 hypothetical ...	[more]
XP_038894607.1	1.58e-40	91.01	uncharacterized protein LOC120083122 [Benincasa hispida]	[more]
XP_022994572.1	5.95e-38	88.89	uncharacterized protein LOC111490251 [Cucurbita maxima]	[more]
XP_022954980.1	5.95e-38	88.89	uncharacterized protein LOC111457077 [Cucurbita moschata]	[more]

BLAST of MELO.jh034110.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO.jh034110.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BK41	1.14e-47	98.88	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3AUX6	1.14e-47	98.88	uncharacterized protein LOC103482943 OS=Cucumis melo OX=3656 GN=LOC103482943 PE=...	[more]
A0A0A0LTZ2	6.92e-46	98.88	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045500 PE=4 SV=1	[more]
A0A6J1JW85	2.88e-38	88.89	uncharacterized protein LOC111490251 OS=Cucurbita maxima OX=3661 GN=LOC111490251...	[more]
A0A6J1GTW4	2.88e-38	88.89	uncharacterized protein LOC111457077 OS=Cucurbita moschata OX=3662 GN=LOC1114570...	[more]

BLAST of MELO.jh034110.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G62760.1	2.4e-14	53.75	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT5G62760.4	2.4e-14	53.75	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT5G62760.3	2.4e-14	53.75	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..61

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO.jh034110.1.t1	MELO.jh034110.1.t1	mRNA