MELO.jh033764.1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh033764.1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Plant transposase
Location	chr09: 5509086 .. 5509687 (+)
RNA-Seq Expression	MELO.jh033764.1
Synteny	MELO.jh033764.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCAAGGTACAATGTGGAAGATTGGCAAAAAAAGTTTTTCTTCCAAAAGATGGGTAGATTATGGAGGGCTGGAAAATCTCGTTTAGTAAAATAAATTCGAGATGCCCCAACAAAGGATGCAATTTTGAAGTTAATGCCTGATAATTTACAATCTGTAGATGATTGGATGGATTTTGTGAGTTAGAAGACTAGTGCAACCTTCAAGGTACGTAAATCTCTACTTCAAAACATATACACTTACATTTGATTATTATTAATTTTTGTGAAGTTTGAATGTATTTTATTTGAGTAGTTGAAAAGTGAAAAGTACAAAGCCATGAAGAAAAAGCAACTCCCACAAACATGTAGTAGAAAAGGGTATGCTCGTTTGGCCGAAGAGATGGTAAAGTTTGTTACTATACTTCAATTTTTCTTTCGTATCGTATATGTGGTTTCATTGTATAAATCTCATTTTGTAGAGAAAAAGTAGTTCGGATCCATCTTCGGTCACAAGGGTTGCATTATGGACTAAAGCGCACAAAAGGAAGGATGGACAACCGATGAATTCACAAGTTGCCGAGACACTTGTATGTCTTCATTGCAATTTGTGTTCGCATTCTTAG

mRNA sequence

GTCAAGGTACAATGTGGAAGATTGGCAAAAAAAGTTTTTCTTCCAAAAGATGGGTAGATTATGGAGGGCTGGAAAATCTCGTTTATTGAAAAGTGAAAAGTACAAAGCCATGAAGAAAAAGCAACTCCCACAAACATGTAGTAGAAAAGGGTATGCTCGTTTGGCCGAAGAGATGAGAAAAAGTAGTTCGGATCCATCTTCGGTCACAAGGGTTGCATTATGGACTAAAGCGCACAAAAGGAAGGATGGACAACCGATGAATTCACAAGTTGCCGAGACACTTGTATGTCTTCATTGCAATTTGTGTTCGCATTCTTAG

Coding sequence (CDS)

ATGGGTAGATTATGGAGGGCTGGAAAATCTCGTTTATTGAAAAGTGAAAAGTACAAAGCCATGAAGAAAAAGCAACTCCCACAAACATGTAGTAGAAAAGGGTATGCTCGTTTGGCCGAAGAGATGAGAAAAAGTAGTTCGGATCCATCTTCGGTCACAAGGGTTGCATTATGGACTAAAGCGCACAAAAGGAAGGATGGACAACCGATGAATTCACAAGTTGCCGAGACACTTGTATGTCTTCATTGCAATTTGTGTTCGCATTCTTAG

Protein sequence

MGRLWRAGKSRLLKSEKYKAMKKKQLPQTCSRKGYARLAEEMRKSSSDPSSVTRVALWTKAHKRKDGQPMNSQVAETLVCLHCNLCSHS

Homology

[Close]

BLAST of MELO.jh033764.1 vs. NCBI nr
Match: XP_008450220.1 (PREDICTED: uncharacterized protein LOC103491884 [Cucumis melo])

HSP 1 Score: 139 bits (349), Expect = 7.45e-40
Identity = 81/129 (62.79%), Postives = 84/129 (65.12%), Query Frame = 0


Query: 1   MGRLWRAGKSRL----------------------------------------LKSEKYKA 60
           MGRLWRA KSRL                                        LKSEKYKA
Sbjct: 22  MGRLWRARKSRLVKQIRDVPTKDAILKLMPDNLQSVDDWMDFVSEKTSATFKLKSEKYKA 81

Query: 61  MKKKQLPQTCSRKGYARLAEEMRKSSSDPSSVTRVALWTKAHKRKDGQPMNSQVAETLVC 89
           MKKKQLP TCSRKGYARLAEEMRKSSS+PS VTRVALWTKAHKRKDGQP+NSQVAETLVC
Sbjct: 82  MKKKQLPHTCSRKGYARLAEEMRKSSSNPSLVTRVALWTKAHKRKDGQPVNSQVAETLVC 141

[Close]

BLAST of MELO.jh033764.1 vs. NCBI nr
Match: TYK20620.1 (uncharacterized protein E5676_scaffold2198G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 132 bits (331), Expect = 4.31e-37
Identity = 71/77 (92.21%), Postives = 71/77 (92.21%), Query Frame = 0


Query: 4   LWRAGKSRLLKSEKYKAMKKKQLPQTCSRKGYARLAEEMRKSSSDPSSVTRVALWTKAHK 63
           LW   KS  LKSEKYKAMKKKQLPQTCSRKGYARLAEEMRKSSSDPSSVTRVALWTKAHK
Sbjct: 60  LW---KSIQLKSEKYKAMKKKQLPQTCSRKGYARLAEEMRKSSSDPSSVTRVALWTKAHK 119

Query: 64  RKDGQPMNSQVAETLVC 80
           RKDGQPMNSQVAETL C
Sbjct: 120 RKDGQPMNSQVAETLHC 133

[Close]

BLAST of MELO.jh033764.1 vs. NCBI nr
Match: KAA0051052.1 (uncharacterized protein E6C27_scaffold678G00060 [Cucumis melo var. makuwa])

HSP 1 Score: 130 bits (327), Expect = 6.27e-35
Identity = 70/79 (88.61%), Postives = 71/79 (89.87%), Query Frame = 0


Query: 13  LKSEKYKAMKKKQLPQTCSRKGYARLAEEMRKSSSDPSSVTRVALWTKAHKRKDGQPMNS 72
           LKSEKYKAMKKKQLPQTCSRKGYARLAEEMRKSSSDPSSVTRVALWTKAHKRKDGQPMNS
Sbjct: 73  LKSEKYKAMKKKQLPQTCSRKGYARLAEEMRKSSSDPSSVTRVALWTKAHKRKDGQPMNS 132

Query: 73  QVAETLVCL------HCNL 85
           QVAETL  +      HCNL
Sbjct: 133 QVAETLRGISSVGAQHCNL 151

[Close]

BLAST of MELO.jh033764.1 vs. NCBI nr
Match: KAA0060575.1 (uncharacterized protein E6C27_scaffold22G004450 [Cucumis melo var. makuwa])

HSP 1 Score: 125 bits (313), Expect = 2.26e-33
Identity = 63/69 (91.30%), Postives = 65/69 (94.20%), Query Frame = 0


Query: 13 LKSEKYKAMKKKQLPQTCSRKGYARLAEEMRKSSSDPSSVTRVALWTKAHKRKDGQPMNS 72
          LKSEKYKAMKKKQLP TCSRKGYARL EEMRKSSSDPSS TRVALWTKAHKRKDGQP+NS
Sbjct: 25 LKSEKYKAMKKKQLPHTCSRKGYARLTEEMRKSSSDPSSFTRVALWTKAHKRKDGQPVNS 84

Query: 73 QVAETLVCL 81
          QVAETL C+
Sbjct: 85 QVAETLECI 93

[Close]

BLAST of MELO.jh033764.1 vs. NCBI nr
Match: TYK02295.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 125 bits (313), Expect = 3.12e-33
Identity = 63/69 (91.30%), Postives = 65/69 (94.20%), Query Frame = 0


Query: 13 LKSEKYKAMKKKQLPQTCSRKGYARLAEEMRKSSSDPSSVTRVALWTKAHKRKDGQPMNS 72
          LKSEKYKAMKKKQLP TCSRKGYARL EEMRKSSSDPSS TRVALWTKAHKRKDGQP+NS
Sbjct: 25 LKSEKYKAMKKKQLPHTCSRKGYARLTEEMRKSSSDPSSFTRVALWTKAHKRKDGQPVNS 84

Query: 73 QVAETLVCL 81
          QVAETL C+
Sbjct: 85 QVAETLECI 93

[Close]

BLAST of MELO.jh033764.1 vs. ExPASy TrEMBL
Match: A0A1S3BNQ8 (uncharacterized protein LOC103491884 OS=Cucumis melo OX=3656 GN=LOC103491884 PE=4 SV=1)

HSP 1 Score: 139 bits (349), Expect = 3.61e-40
Identity = 81/129 (62.79%), Postives = 84/129 (65.12%), Query Frame = 0


Query: 1   MGRLWRAGKSRL----------------------------------------LKSEKYKA 60
           MGRLWRA KSRL                                        LKSEKYKA
Sbjct: 22  MGRLWRARKSRLVKQIRDVPTKDAILKLMPDNLQSVDDWMDFVSEKTSATFKLKSEKYKA 81

Query: 61  MKKKQLPQTCSRKGYARLAEEMRKSSSDPSSVTRVALWTKAHKRKDGQPMNSQVAETLVC 89
           MKKKQLP TCSRKGYARLAEEMRKSSS+PS VTRVALWTKAHKRKDGQP+NSQVAETLVC
Sbjct: 82  MKKKQLPHTCSRKGYARLAEEMRKSSSNPSLVTRVALWTKAHKRKDGQPVNSQVAETLVC 141

[Close]

BLAST of MELO.jh033764.1 vs. ExPASy TrEMBL
Match: A0A5D3DB14 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2198G00010 PE=4 SV=1)

HSP 1 Score: 132 bits (331), Expect = 2.09e-37
Identity = 71/77 (92.21%), Postives = 71/77 (92.21%), Query Frame = 0


Query: 4   LWRAGKSRLLKSEKYKAMKKKQLPQTCSRKGYARLAEEMRKSSSDPSSVTRVALWTKAHK 63
           LW   KS  LKSEKYKAMKKKQLPQTCSRKGYARLAEEMRKSSSDPSSVTRVALWTKAHK
Sbjct: 60  LW---KSIQLKSEKYKAMKKKQLPQTCSRKGYARLAEEMRKSSSDPSSVTRVALWTKAHK 119

Query: 64  RKDGQPMNSQVAETLVC 80
           RKDGQPMNSQVAETL C
Sbjct: 120 RKDGQPMNSQVAETLHC 133

[Close]

BLAST of MELO.jh033764.1 vs. ExPASy TrEMBL
Match: A0A5A7U5C3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold678G00060 PE=4 SV=1)

HSP 1 Score: 130 bits (327), Expect = 3.04e-35
Identity = 70/79 (88.61%), Postives = 71/79 (89.87%), Query Frame = 0


Query: 13  LKSEKYKAMKKKQLPQTCSRKGYARLAEEMRKSSSDPSSVTRVALWTKAHKRKDGQPMNS 72
           LKSEKYKAMKKKQLPQTCSRKGYARLAEEMRKSSSDPSSVTRVALWTKAHKRKDGQPMNS
Sbjct: 73  LKSEKYKAMKKKQLPQTCSRKGYARLAEEMRKSSSDPSSVTRVALWTKAHKRKDGQPMNS 132

Query: 73  QVAETLVCL------HCNL 85
           QVAETL  +      HCNL
Sbjct: 133 QVAETLRGISSVGAQHCNL 151

[Close]

BLAST of MELO.jh033764.1 vs. ExPASy TrEMBL
Match: A0A5A7V3Y8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G004450 PE=4 SV=1)

HSP 1 Score: 125 bits (313), Expect = 1.09e-33
Identity = 63/69 (91.30%), Postives = 65/69 (94.20%), Query Frame = 0


Query: 13 LKSEKYKAMKKKQLPQTCSRKGYARLAEEMRKSSSDPSSVTRVALWTKAHKRKDGQPMNS 72
          LKSEKYKAMKKKQLP TCSRKGYARL EEMRKSSSDPSS TRVALWTKAHKRKDGQP+NS
Sbjct: 25 LKSEKYKAMKKKQLPHTCSRKGYARLTEEMRKSSSDPSSFTRVALWTKAHKRKDGQPVNS 84

Query: 73 QVAETLVCL 81
          QVAETL C+
Sbjct: 85 QVAETLECI 93

[Close]

BLAST of MELO.jh033764.1 vs. ExPASy TrEMBL
Match: A0A5D3BT05 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G001040 PE=4 SV=1)

HSP 1 Score: 125 bits (313), Expect = 1.51e-33
Identity = 63/69 (91.30%), Postives = 65/69 (94.20%), Query Frame = 0


Query: 13 LKSEKYKAMKKKQLPQTCSRKGYARLAEEMRKSSSDPSSVTRVALWTKAHKRKDGQPMNS 72
          LKSEKYKAMKKKQLP TCSRKGYARL EEMRKSSSDPSS TRVALWTKAHKRKDGQP+NS
Sbjct: 25 LKSEKYKAMKKKQLPHTCSRKGYARLTEEMRKSSSDPSSFTRVALWTKAHKRKDGQPVNS 84

Query: 73 QVAETLVCL 81
          QVAETL C+
Sbjct: 85 QVAETLECI 93

The following BLAST results are available for this feature:

BLAST of MELO.jh033764.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008450220.1	7.45e-40	62.79	PREDICTED: uncharacterized protein LOC103491884 [Cucumis melo]	[more]
TYK20620.1	4.31e-37	92.21	uncharacterized protein E5676_scaffold2198G00010 [Cucumis melo var. makuwa]	[more]
KAA0051052.1	6.27e-35	88.61	uncharacterized protein E6C27_scaffold678G00060 [Cucumis melo var. makuwa]	[more]
KAA0060575.1	2.26e-33	91.30	uncharacterized protein E6C27_scaffold22G004450 [Cucumis melo var. makuwa]	[more]
TYK02295.1	3.12e-33	91.30	Plant transposase [Cucumis melo var. makuwa]	[more]

BLAST of MELO.jh033764.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO.jh033764.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BNQ8	3.61e-40	62.79	uncharacterized protein LOC103491884 OS=Cucumis melo OX=3656 GN=LOC103491884 PE=...	[more]
A0A5D3DB14	2.09e-37	92.21	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7U5C3	3.04e-35	88.61	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7V3Y8	1.09e-33	91.30	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3BT05	1.51e-33	91.30	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G001...	[more]

BLAST of MELO.jh033764.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004252	Probable transposase, Ptta/En/Spm, plant	PFAM	PF03004	Transposase_24	coord: 1..78 e-value: 7.9E-10 score: 39.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO.jh033764.1.t1	MELO.jh033764.1.t1	mRNA