MELO.jh033661.1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh033661.1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Major pollen allergen Ole e 6-like
Location	chr07: 24175477 .. 24176371 (-)
RNA-Seq Expression	MELO.jh033661.1
Synteny	MELO.jh033661.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGGAAAAAAATAGGCTTACTAAAAGCTAAAACTAAAAAATGGCAAAAACCAGTACGGTAGTTTTCTTTATGTGCATTGTTGTTGTGGTGGGATCACTGCAATTCTCTAGGGCAGACATGACTGCTGACAGGGACACTGAGATTGAGATGAGATCTAAGTTGTTGCAGAGCGAAATATCCAGCGTAATGCCTCAATTCAAATCATGTGTGGAAACCTGTGAGAAAGCATGCATCGCAAAAGACGGTGCCAACACATCGTGTCATTCTACATGTGATAAAGATTGCATGAAAAAGGAAGTTGTTGGTATCGTCTTGAATCTTTGAAGATATGTTTTTTTTTAATCAAGACGATAAATAGTTTTTTTGTGTGCGGTCAATTTTAGTTGCGAGGCAAACTTCACTTTTGTTATGGAAATTAGTGAGTTTTAGTAAGGTAAGGTCGGTACGTGTTCCATACTTTAATATAGTTTTGACGCTAGAATTTGAAGGGATATGACAATTGAAATTTTAGAATGAAAACTCATGTCAAAATTTAACGAAAATTTAGTTGTTTATTTCTCCCAACTTATTGATCGTTTTCTTTTTATTTGTGTGTTAACTTCGATTTTTTATTCGTCTGTTTTGCAGATAAAATCAGCGACAAACTAGGCATTCGTAATTGACCATGAAATTAAAGTTGGGACGTGGAAAATGGTCAGATCAAGTATAAATTATTTGGATAATTAATATTTCAGATAGGAAAATCCAATTAAATTCCTTGACCCTGTCTTTCGTTTTTGTCATCCAATTGGTTGCTTCTTTATACAAAGGTTTTATGTTATGTATCGTTGTGGTCTTTTTCATCATTATTTTCAACAACGGATCAATAAAAGTCATCTAACTTTGTGTTTGTTCA

mRNA sequence

AAGGAAAAAAATAGGCTTACTAAAAGCTAAAACTAAAAAATGGCAAAAACCAGTACGGTAGTTTTCTTTATGTGCATTGTTGTTGTGGTGGGATCACTGCAATTCTCTAGGGCAGACATGACTGCTGACAGGGACACTGAGATTGAGATGAGATCTAAGTTGTTGCAGAGCGAAATATCCAGCGTAATGCCTCAATTCAAATCATGTGTGGAAACCTGTGAGAAAGCATGCATCGCAAAAGACGGTGCCAACACATCGTGTCATTCTACATGTGATAAAGATTGCATGAAAAAGGAAGTTGTTGATAAAATCAGCGACAAACTAGGCATTCGTAATTGACCATGAAATTAAAGTTGGGACGTGGAAAATGGTCAGATCAAGTATAAATTATTTGGATAATTAATATTTCAGATAGGAAAATCCAATTAAATTCCTTGACCCTGTCTTTCGTTTTTGTCATCCAATTGGTTGCTTCTTTATACAAAGGTTTTATGTTATGTATCGTTGTGGTCTTTTTCATCATTATTTTCAACAACGGATCAATAAAAGTCATCTAACTTTGTGTTTGTTCA

Coding sequence (CDS)

ATGGCAAAAACCAGTACGGTAGTTTTCTTTATGTGCATTGTTGTTGTGGTGGGATCACTGCAATTCTCTAGGGCAGACATGACTGCTGACAGGGACACTGAGATTGAGATGAGATCTAAGTTGTTGCAGAGCGAAATATCCAGCGTAATGCCTCAATTCAAATCATGTGTGGAAACCTGTGAGAAAGCATGCATCGCAAAAGACGGTGCCAACACATCGTGTCATTCTACATGTGATAAAGATTGCATGAAAAAGGAAGTTGTTGATAAAATCAGCGACAAACTAGGCATTCGTAATTGA

Protein sequence

MAKTSTVVFFMCIVVVVGSLQFSRADMTADRDTEIEMRSKLLQSEISSVMPQFKSCVETCEKACIAKDGANTSCHSTCDKDCMKKEVVDKISDKLGIRN

Homology

[Close]

BLAST of MELO.jh033661.1 vs. NCBI nr
Match: KAA0036015.1 (major pollen allergen Ole e 6-like [Cucumis melo var. makuwa])

HSP 1 Score: 185 bits (470), Expect = 8.39e-59
Identity = 93/99 (93.94%), Postives = 97/99 (97.98%), Query Frame = 0


Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTADRDTEIEMRSKLLQSEISSVMPQFKSCVETC 60
          MAK+ST+VFFMCIVVVVGSLQFSRADMTA+RDTEIEMRSKLLQSEIS+VMPQFKSCVETC
Sbjct: 1  MAKSSTIVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC 60

Query: 61 EKACIAKDGANTSCHSTCDKDCMKKEVVDKISDKLGIRN 99
           KACIAKD ANTSCHSTCDKDCMKKEVVDKISDKLGIRN
Sbjct: 61 AKACIAKDSANTSCHSTCDKDCMKKEVVDKISDKLGIRN 99

[Close]

BLAST of MELO.jh033661.1 vs. NCBI nr
Match: KAA0035393.1 (major pollen allergen Ole e 6-like [Cucumis melo var. makuwa])

HSP 1 Score: 172 bits (437), Expect = 7.78e-54
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTADRDTEIEMRSKLLQSEISSVMPQFKSCVETC 60
          MAKTSTVVFFMCIVVVVGSLQFSRADMTADRDTEIEMRSKLLQSEISSVMPQFKSCVETC
Sbjct: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTADRDTEIEMRSKLLQSEISSVMPQFKSCVETC 60

Query: 61 EKACIAKDGANTSCHSTCDKDCMKKEVV 88
          EKACIAKDGANTSCHSTCDKDCMKKEVV
Sbjct: 61 EKACIAKDGANTSCHSTCDKDCMKKEVV 88

[Close]

BLAST of MELO.jh033661.1 vs. NCBI nr
Match: KAE8637567.1 (hypothetical protein CSA_017844, partial [Cucumis sativus])

HSP 1 Score: 75.5 bits (184), Expect = 3.82e-15
Identity = 41/86 (47.67%), Postives = 54/86 (62.79%), Query Frame = 0


Query: 3   KTSTVVFFMCIVVVVGSLQFSRADMTADRDTEIEMRSKLLQ-SEISSVMPQFKSCVETCE 62
           K   VVFFMCIVV+ GSLQFS+A  TA+   +++   K+   +E   + PQ +SCV TC 
Sbjct: 20  KNIMVVFFMCIVVM-GSLQFSKAQTTANMSPDLQAAEKIKSIAEGMKLWPQMESCVLTCR 79

Query: 63  KACIAKDGANTSCHSTCDKDCMKKEV 87
           K C AK  AN SCH  C+ DC +K +
Sbjct: 80  KECDAKGNANASCHQKCNNDCTEKTI 104

[Close]

BLAST of MELO.jh033661.1 vs. NCBI nr
Match: KAG6595593.1 (hypothetical protein SDJN03_12146, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 71.2 bits (173), Expect = 9.99e-14
Identity = 44/95 (46.32%), Postives = 55/95 (57.89%), Query Frame = 0


Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTADRDTEIEMRSKLLQSEISSVMPQFKSCVETC 60
          MAK    V  MC V+VV +LQFS    TAD+ TE+E + K   S+  +V  +FKSC  TC
Sbjct: 1  MAKKMMAVVLMC-VLVVSALQFS----TADKSTEMEAKFKSFFSDFGTVEAKFKSCAATC 60

Query: 61 EKACIAKDGANTSCHSTCDKDCMKKEVVDKISDKL 95
          +K C      N SC S CD DC KKEV +K   K+
Sbjct: 61 QKKC-----TNASCRSKCDADCGKKEVENKFKIKI 85

[Close]

BLAST of MELO.jh033661.1 vs. NCBI nr
Match: KAG6595587.1 (hypothetical protein SDJN03_12140, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 69.7 bits (169), Expect = 4.47e-13
Identity = 42/95 (44.21%), Postives = 54/95 (56.84%), Query Frame = 0


Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTADRDTEIEMRSKLLQSEISSVMPQFKSCVETC 60
          MAK    V  MC V++V +LQFS    TAD   E+E R K    ++S V  + KSC  TC
Sbjct: 1  MAKKMMAVLLMC-VLLVSALQFS----TADSPAEMEARFKSFFGDLSGVEAKLKSCAATC 60

Query: 61 EKACIAKDGANTSCHSTCDKDCMKKEVVDKISDKL 95
          EK C+AK   + SC   C+ DC KKEV +K +  L
Sbjct: 61 EKECVAKGETSESCKPKCNTDCGKKEVSEKFNIHL 90

[Close]

BLAST of MELO.jh033661.1 vs. ExPASy TrEMBL
Match: A0A5A7T3F9 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold494G00090 PE=4 SV=1)

HSP 1 Score: 185 bits (470), Expect = 4.06e-59
Identity = 93/99 (93.94%), Postives = 97/99 (97.98%), Query Frame = 0


Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTADRDTEIEMRSKLLQSEISSVMPQFKSCVETC 60
          MAK+ST+VFFMCIVVVVGSLQFSRADMTA+RDTEIEMRSKLLQSEIS+VMPQFKSCVETC
Sbjct: 1  MAKSSTIVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC 60

Query: 61 EKACIAKDGANTSCHSTCDKDCMKKEVVDKISDKLGIRN 99
           KACIAKD ANTSCHSTCDKDCMKKEVVDKISDKLGIRN
Sbjct: 61 AKACIAKDSANTSCHSTCDKDCMKKEVVDKISDKLGIRN 99

[Close]

BLAST of MELO.jh033661.1 vs. ExPASy TrEMBL
Match: A0A5A7SXV7 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13030G00010 PE=4 SV=1)

HSP 1 Score: 172 bits (437), Expect = 3.77e-54
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTADRDTEIEMRSKLLQSEISSVMPQFKSCVETC 60
          MAKTSTVVFFMCIVVVVGSLQFSRADMTADRDTEIEMRSKLLQSEISSVMPQFKSCVETC
Sbjct: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTADRDTEIEMRSKLLQSEISSVMPQFKSCVETC 60

Query: 61 EKACIAKDGANTSCHSTCDKDCMKKEVV 88
          EKACIAKDGANTSCHSTCDKDCMKKEVV
Sbjct: 61 EKACIAKDGANTSCHSTCDKDCMKKEVV 88

[Close]

BLAST of MELO.jh033661.1 vs. ExPASy TrEMBL
Match: A0A0A0K9Z9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G106720 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.45e-07
Identity = 39/96 (40.62%), Postives = 50/96 (52.08%), Query Frame = 0


Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTADRDTEIEMRSKLLQSEISSVMPQFKSCVETC 60
          MAK    VF MCIVVV  +LQF  A+   D  T+ E +             ++KSC ETC
Sbjct: 1  MAKKMMAVFLMCIVVV-ATLQFVMAN-EEDGVTKYEAKFDA----------KYKSCYETC 60

Query: 61 EKACIAKDGANTS-CHSTCDKDCMKKEVVDKISDKL 95
          EK C+  D    S C   CD+DC +KE  DK+  +L
Sbjct: 61 EKECLRNDTNGESFCEVKCDEDCSEKEAADKLHIEL 84

[Close]

BLAST of MELO.jh033661.1 vs. ExPASy TrEMBL
Match: A0A0A0KPA7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G222980 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.91e-07
Identity = 34/95 (35.79%), Postives = 47/95 (49.47%), Query Frame = 0


Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTADRDTEIEMRSKLLQSEISSVMPQFKSCVETC 60
          MA     +F MCIVVV  +LQF+ A+       E +  +K            +KSC ETC
Sbjct: 1  MANKMIALFLMCIVVV-AALQFANANKEDVAKYEAKFDAK------------YKSCFETC 60

Query: 61 EKACIAKDGANTSCHSTCDKDCMKKEVVDKISDKL 95
          EK C+      + C   CD+DC +KE  DK+  +L
Sbjct: 61 EKECLRYGSGQSYCEVKCDEDCDEKEAADKLHIEL 82

[Close]

BLAST of MELO.jh033661.1 vs. ExPASy TrEMBL
Match: A0A6J1EQ21 (major pollen allergen Ole e 6-like OS=Cucurbita moschata OX=3662 GN=LOC111436354 PE=4 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 2.60e-05
Identity = 32/95 (33.68%), Postives = 49/95 (51.58%), Query Frame = 0


Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTADRDTEIEMRSKLLQSEISSVMPQFKSCVETC 60
          MAK    V  +CIVVV  +LQ S A  +A ++ + E + +           +++ C E C
Sbjct: 1  MAKKMIAVLLVCIVVV-AALQVSSATESA-KEAKYEAKFEA----------KYRLCYEKC 60

Query: 61 EKACIAKDGANTSCHSTCDKDCMKKEVVDKISDKL 95
          EK C+ K    + C   CD+DC +KE  DK+  K+
Sbjct: 61 EKECLEKGNGQSFCEVKCDEDCGEKEAADKLHIKV 83

The following BLAST results are available for this feature:

BLAST of MELO.jh033661.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0036015.1	8.39e-59	93.94	major pollen allergen Ole e 6-like [Cucumis melo var. makuwa]	[more]
KAA0035393.1	7.78e-54	100.00	major pollen allergen Ole e 6-like [Cucumis melo var. makuwa]	[more]
KAE8637567.1	3.82e-15	47.67	hypothetical protein CSA_017844, partial [Cucumis sativus]	[more]
KAG6595593.1	9.99e-14	46.32	hypothetical protein SDJN03_12146, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6595587.1	4.47e-13	44.21	hypothetical protein SDJN03_12140, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of MELO.jh033661.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO.jh033661.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T3F9	4.06e-59	93.94	Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A5A7SXV7	3.77e-54	100.00	Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A0A0K9Z9	1.45e-07	40.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G106720 PE=4 SV=1	[more]
A0A0A0KPA7	3.91e-07	35.79	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G222980 PE=4 SV=1	[more]
A0A6J1EQ21	2.60e-05	33.68	major pollen allergen Ole e 6-like OS=Cucurbita moschata OX=3662 GN=LOC111436354...	[more]

BLAST of MELO.jh033661.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036466	Pollen allergen ole e 6 superfamily	GENE3D	1.10.287.720	Pollen allergen ole e 6	coord: 51..95 e-value: 2.1E-10 score: 42.0
IPR036466	Pollen allergen ole e 6 superfamily	SUPERFAMILY	111388	Pollen allergen ole e 6	coord: 52..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO.jh033661.1.t1	MELO.jh033661.1.t1	mRNA