MELO.jh033600.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh033600.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionTransposon Ty1-GR2 Gag-Pol polyprotein
Locationchr07: 1940844 .. 1941683 (+)
RNA-Seq ExpressionMELO.jh033600.1
SyntenyMELO.jh033600.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
GTAAGCCAATTCATGCACGCACCTCGAACTTGTCACATGGAAGCCATTAACCGAATATTAAGATATCTCAAAGGCACTCCTGGACAAGGAATATTAATGAAACAAAACTCGACTAACACTGTGGTTGGATTTTCTGATGCAGATTGGGCCGGAAGTTGTGACAGAAAATCAACCACTGGTTTTTGCACTTTCGTAGGTGGCAATCTAGTAACATGGAAGAGCAAGAAACAGAACGTGGTGGCTCGTTCAAGTGCAGAAGCTGAGTACAGAGCGATGGCATCAACGGCAAGCGAACTCATTTGGATCAAGCATCTGCTACACGACATGCAAATTGAATGTTCAGAACCTATACAAATGTTCTGTGACAACCAAGCGGCACGTCATATTGCTTCAAACCCCGTATTCCATGAGAGAACAAAGCACATAGAAGTAGATTGTCATTTTATACGAGATAAAGTGCAGTCAAAGGAAATTGAGATTCCTTTCATCCGAAGCCAAGAACAACTAGCGGATATCTTCACTAAAGCTTTGGACAAGAAAACCTCTCAACAAATTCTCAGCAAGTTAGGCGCTCACAACCTGTTCGAACCAAACTTGAGGGGGAGTATTGAAGGATTAAGATCAGAATTAATGGCCTCAGATTCATAGAATCATCATAGGCTGTACATGGAAACATGTCAACGGCTAATACAGTATACATATATAGGATTTAGCTACAATTAAGCATTAGGCTGCAATTATACCATATTTAACATCCAGCGTAATTATAGGAATAGATTAACGGCTAATTGTACAAGCCAATTATAAATAGATATATACTCTTCTGTAAAGAATAATAAT

mRNA sequence

GTAAGCCAATTCATGCACGCACCTCGAACTTGTCACATGGAAGCCATTAACCGAATATTAAGATATCTCAAAGGCACTCCTGGACAAGGAATATTAATGAAACAAAACTCGACTAACACTGTGGTTGGATTTTCTGATGCAGATTGGGCCGGAAGTTGTGACAGAAAATCAACCACTGGTTTTTGCACTTTCGTAGGTGGCAATCTAGTAACATGGAAGAGCAAGAAACAGAACGTGGTGGCTCGTTCAAGTGCAGAAGCTGAGTACAGAGCGATGGCATCAACGGCAAGCGAACTCATTTGGATCAAGCATCTGCTACACGACATGCAAATTGAATGTTCAGAACCTATACAAATGTTCTGTGACAACCAAGCGGCACGTCATATTGCTTCAAACCCCGTATTCCATGAGAGAACAAAGCACATAGAAGTAGATTGTCATTTTATACGAGATAAAGTGCAGTCAAAGGAAATTGAGATTCCTTTCATCCGAAGCCAAGAACAACTAGCGGATATCTTCACTAAAGCTTTGGACAAGAAAACCTCTCAACAAATTCTCAGCAAGTTAGGCGCTCACAACCTGTTCGAACCAAACTTGAGGGGGAGTATTGAAGGATTAAGATCAGAATTAATGGCCTCAGATTCATAGAATCATCATAGGCTGTACATGGAAACATGTCAACGGCTAATACAGTATACATATATAGGATTTAGCTACAATTAAGCATTAGGCTGCAATTATACCATATTTAACATCCAGCGTAATTATAGGAATAGATTAACGGCTAATTGTACAAGCCAATTATAAATAGATATATACTCTTCTGTAAAGAATAATAAT

Coding sequence (CDS)

ATGCACGCACCTCGAACTTGTCACATGGAAGCCATTAACCGAATATTAAGATATCTCAAAGGCACTCCTGGACAAGGAATATTAATGAAACAAAACTCGACTAACACTGTGGTTGGATTTTCTGATGCAGATTGGGCCGGAAGTTGTGACAGAAAATCAACCACTGGTTTTTGCACTTTCGTAGGTGGCAATCTAGTAACATGGAAGAGCAAGAAACAGAACGTGGTGGCTCGTTCAAGTGCAGAAGCTGAGTACAGAGCGATGGCATCAACGGCAAGCGAACTCATTTGGATCAAGCATCTGCTACACGACATGCAAATTGAATGTTCAGAACCTATACAAATGTTCTGTGACAACCAAGCGGCACGTCATATTGCTTCAAACCCCGTATTCCATGAGAGAACAAAGCACATAGAAGTAGATTGTCATTTTATACGAGATAAAGTGCAGTCAAAGGAAATTGAGATTCCTTTCATCCGAAGCCAAGAACAACTAGCGGATATCTTCACTAAAGCTTTGGACAAGAAAACCTCTCAACAAATTCTCAGCAAGTTAGGCGCTCACAACCTGTTCGAACCAAACTTGAGGGGGAGTATTGAAGGATTAAGATCAGAATTAATGGCCTCAGATTCATAG

Protein sequence

MHAPRTCHMEAINRILRYLKGTPGQGILMKQNSTNTVVGFSDADWAGSCDRKSTTGFCTFVGGNLVTWKSKKQNVVARSSAEAEYRAMASTASELIWIKHLLHDMQIECSEPIQMFCDNQAARHIASNPVFHERTKHIEVDCHFIRDKVQSKEIEIPFIRSQEQLADIFTKALDKKTSQQILSKLGAHNLFEPNLRGSIEGLRSELMASDS
Homology
BLAST of MELO.jh033600.1 vs. NCBI nr
Match: KAA0036222.1 (copia-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 428 bits (1101), Expect = 2.95e-142
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0

Query: 1   MHAPRTCHMEAINRILRYLKGTPGQGILMKQNSTNTVVGFSDADWAGSCDRKSTTGFCTF 60
           MHAPRTCHMEAINRILRYLKGTPGQGILMKQNSTNTVVGFSDADWAGSCDRKSTTGFCTF
Sbjct: 666 MHAPRTCHMEAINRILRYLKGTPGQGILMKQNSTNTVVGFSDADWAGSCDRKSTTGFCTF 725

Query: 61  VGGNLVTWKSKKQNVVARSSAEAEYRAMASTASELIWIKHLLHDMQIECSEPIQMFCDNQ 120
           VGGNLVTWKSKKQNVVARSSAEAEYRAMASTASELIWIKHLLHDMQIECSEPIQMFCDNQ
Sbjct: 726 VGGNLVTWKSKKQNVVARSSAEAEYRAMASTASELIWIKHLLHDMQIECSEPIQMFCDNQ 785

Query: 121 AARHIASNPVFHERTKHIEVDCHFIRDKVQSKEIEIPFIRSQEQLADIFTKALDKKTSQQ 180
           AARHIASNPVFHERTKHIEVDCHFIRDKVQSKEIEIPFIRSQEQLADIFTKALDKKTSQQ
Sbjct: 786 AARHIASNPVFHERTKHIEVDCHFIRDKVQSKEIEIPFIRSQEQLADIFTKALDKKTSQQ 845

Query: 181 ILSKLGAHNLFEPNLRGSIEGLRSELMASDS 211
           ILSKLGAHNLFEPNLRGSIEGLRSELMASDS
Sbjct: 846 ILSKLGAHNLFEPNLRGSIEGLRSELMASDS 876

BLAST of MELO.jh033600.1 vs. NCBI nr
Match: TYK00722.1 (copia-like protein [Cucumis melo var. makuwa] >TYK25285.1 copia-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 428 bits (1101), Expect = 3.77e-141
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0

Query: 1   MHAPRTCHMEAINRILRYLKGTPGQGILMKQNSTNTVVGFSDADWAGSCDRKSTTGFCTF 60
           MHAPRTCHMEAINRILRYLKGTPGQGILMKQNSTNTVVGFSDADWAGSCDRKSTTGFCTF
Sbjct: 770 MHAPRTCHMEAINRILRYLKGTPGQGILMKQNSTNTVVGFSDADWAGSCDRKSTTGFCTF 829

Query: 61  VGGNLVTWKSKKQNVVARSSAEAEYRAMASTASELIWIKHLLHDMQIECSEPIQMFCDNQ 120
           VGGNLVTWKSKKQNVVARSSAEAEYRAMASTASELIWIKHLLHDMQIECSEPIQMFCDNQ
Sbjct: 830 VGGNLVTWKSKKQNVVARSSAEAEYRAMASTASELIWIKHLLHDMQIECSEPIQMFCDNQ 889

Query: 121 AARHIASNPVFHERTKHIEVDCHFIRDKVQSKEIEIPFIRSQEQLADIFTKALDKKTSQQ 180
           AARHIASNPVFHERTKHIEVDCHFIRDKVQSKEIEIPFIRSQEQLADIFTKALDKKTSQQ
Sbjct: 890 AARHIASNPVFHERTKHIEVDCHFIRDKVQSKEIEIPFIRSQEQLADIFTKALDKKTSQQ 949

Query: 181 ILSKLGAHNLFEPNLRGSIEGLRSELMASDS 211
           ILSKLGAHNLFEPNLRGSIEGLRSELMASDS
Sbjct: 950 ILSKLGAHNLFEPNLRGSIEGLRSELMASDS 980

BLAST of MELO.jh033600.1 vs. NCBI nr
Match: KAF3329755.1 (Copia protein [Carex littledalei])

HSP 1 Score: 263 bits (672), Expect = 1.68e-86
Identity = 124/172 (72.09%), Postives = 148/172 (86.05%), Query Frame = 0

Query: 29  MKQNSTNTVVGFSDADWAGSCDRKSTTGFCTFVGGNLVTWKSKKQNVVARSSAEAEYRAM 88
           MK N +N V G+SDADWAGS DRKSTTG+CTFVGGNLVTWKSKKQNVVARSSAEAEYRAM
Sbjct: 1   MKNNKSNEVCGYSDADWAGSFDRKSTTGYCTFVGGNLVTWKSKKQNVVARSSAEAEYRAM 60

Query: 89  ASTASELIWIKHLLHDMQIECSEPIQMFCDNQAARHIASNPVFHERTKHIEVDCHFIRDK 148
           ASTASEL WIK LL ++  +  +P++MFCDN AARHIASN VFHERTKHIEVDCHFIR+K
Sbjct: 61  ASTASELTWIKQLLEELNFKIDKPMKMFCDNNAARHIASNAVFHERTKHIEVDCHFIREK 120

Query: 149 VQSKEIEIPFIRSQEQLADIFTKALDKKTSQQILSKLGAHNLFEPNLRGSIE 200
           VQ+KEIE P+++SQ+QLADIFTK L  +  ++I +KLG  +++ P+LRGS+E
Sbjct: 121 VQAKEIETPYVKSQDQLADIFTKGLIPRAFEEITNKLGLTDIYNPSLRGSVE 172

BLAST of MELO.jh033600.1 vs. NCBI nr
Match: GAV90402.1 (hypothetical protein CFOL_v3_33811, partial [Cephalotus follicularis])

HSP 1 Score: 265 bits (678), Expect = 5.42e-86
Identity = 127/193 (65.80%), Postives = 159/193 (82.38%), Query Frame = 0

Query: 1   MHAPRTCHMEAINRILRYLKGTPGQGILMKQNSTNTVVGFSDADWAGS-CDRKSTTGFCT 60
           +HAP   HM+ ++R+LRYLK  PG+GI MK+N    ++G++D DWAG+  DR+ST+GFCT
Sbjct: 84  LHAPTLGHMDLVDRVLRYLKSCPGKGIWMKKNDHTEIIGYADVDWAGNPFDRRSTSGFCT 143

Query: 61  FVGGNLVTWKSKKQNVVARSSAEAEYRAMASTASELIWIKHLLHDMQIECS-EPIQMFCD 120
           FVGGNLVTWKSKKQ+VVARSSAEAEYRAMAS  SELIW++HLL+D+ +     PI+++CD
Sbjct: 144 FVGGNLVTWKSKKQSVVARSSAEAEYRAMASATSELIWLRHLLYDLTLRRPVTPIKLYCD 203

Query: 121 NQAARHIASNPVFHERTKHIEVDCHFIRDKVQSKEIEIPFIRSQEQLADIFTKALDKKTS 180
           NQAA HIASNPVFHERTKHIEVDCHF+R+KVQ K I  P+I+S+EQLAD+FTKAL K T 
Sbjct: 204 NQAAIHIASNPVFHERTKHIEVDCHFVREKVQRKIIMTPYIQSEEQLADVFTKALPKNTF 263

Query: 181 QQILSKLGAHNLF 191
           Q IL+KL   ++F
Sbjct: 264 QNILAKLALIDIF 276

BLAST of MELO.jh033600.1 vs. NCBI nr
Match: KAB2608453.1 (mitochondrial proteinhypothetical protein-like [Pyrus ussuriensis x Pyrus communis])

HSP 1 Score: 263 bits (673), Expect = 1.37e-85
Identity = 125/194 (64.43%), Postives = 158/194 (81.44%), Query Frame = 0

Query: 1   MHAPRTCHMEAINRILRYLKGTPGQGILMKQNSTNTVVGFSDADWAGSC-DRKSTTGFCT 60
           MH+P   H+  + RILRYLKG+ G+GILM +N    ++G+ DADWAG+  DRKSTTG+CT
Sbjct: 58  MHSPTIEHLNLVKRILRYLKGSVGRGILMTKNDNTQIMGYCDADWAGNAIDRKSTTGYCT 117

Query: 61  FVGGNLVTWKSKKQNVVARSSAEAEYRAMASTASELIWIKHLLHDMQIECSEPIQMFCDN 120
           FVGGNLVTWKSKKQ V+ARSSAEAEYRAMASTA ELIW+K LL D+ +  ++P+ +FCDN
Sbjct: 118 FVGGNLVTWKSKKQTVIARSSAEAEYRAMASTACELIWLKGLLCDLGVFTTQPMTLFCDN 177

Query: 121 QAARHIASNPVFHERTKHIEVDCHFIRDKVQSKEIEIPFIRSQEQLADIFTKALDKKTSQ 180
           QAA HIASNPVFHERTKHIEVDCH++R++VQS+ I+  +++S +QLADIFTK L     Q
Sbjct: 178 QAAMHIASNPVFHERTKHIEVDCHYVREQVQSQVIQTHYVKSSDQLADIFTKPLASHQFQ 237

Query: 181 QILSKLGAHNLFEP 193
           ++LSKLG+ NL +P
Sbjct: 238 RLLSKLGSINLLDP 251

BLAST of MELO.jh033600.1 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.2e-43
Identity = 86/187 (45.99%), Postives = 124/187 (66.31%), Query Frame = 0

Query: 1    MHAPRTCHMEAINRILRYLKGTPGQGILMKQNSTNTVVGFSDADWAG-SCDRKSTTGFCT 60
            MH P   H++A+ RILRYL GTP  GI +K+ +T ++  +SDADWAG   D  ST G+  
Sbjct: 1273 MHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIV 1332

Query: 61   FVGGNLVTWKSKKQNVVARSSAEAEYRAMASTASELIWIKHLLHDMQIECSEPIQMFCDN 120
            ++G + ++W SKKQ  V RSS EAEYR++A+T+SE+ WI  LL ++ I  + P  ++CDN
Sbjct: 1333 YLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVIYCDN 1392

Query: 121  QAARHIASNPVFHERTKHIEVDCHFIRDKVQSKEIEIPFIRSQEQLADIFTKALDKKTSQ 180
              A ++ +NPVFH R KHI +D HFIR++VQS  + +  + + +QLAD  TK L +   Q
Sbjct: 1393 VGATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRTAFQ 1452

Query: 181  QILSKLG 187
               SK+G
Sbjct: 1453 NFASKIG 1459

BLAST of MELO.jh033600.1 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 5.8e-43
Identity = 86/187 (45.99%), Postives = 122/187 (65.24%), Query Frame = 0

Query: 1    MHAPRTCHMEAINRILRYLKGTPGQGILMKQNSTNTVVGFSDADWAGSC-DRKSTTGFCT 60
            MH P   H  A+ R+LRYL GTP  GI +K+ +T ++  +SDADWAG   D  ST G+  
Sbjct: 1256 MHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIV 1315

Query: 61   FVGGNLVTWKSKKQNVVARSSAEAEYRAMASTASELIWIKHLLHDMQIECSEPIQMFCDN 120
            ++G + ++W SKKQ  V RSS EAEYR++A+T+SEL WI  LL ++ I+ S P  ++CDN
Sbjct: 1316 YLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDN 1375

Query: 121  QAARHIASNPVFHERTKHIEVDCHFIRDKVQSKEIEIPFIRSQEQLADIFTKALDKKTSQ 180
              A ++ +NPVFH R KHI +D HFIR++VQS  + +  + + +QLAD  TK L +   Q
Sbjct: 1376 VGATYLCANPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRVAFQ 1435

Query: 181  QILSKLG 187
                K+G
Sbjct: 1436 NFSRKIG 1442

BLAST of MELO.jh033600.1 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 149.4 bits (376), Expect = 4.4e-35
Identity = 79/179 (44.13%), Postives = 113/179 (63.13%), Query Frame = 0

Query: 12   INRILRYLKGTPGQGILMKQNST--NTVVGFSDADWAGS-CDRKSTTGFC-TFVGGNLVT 71
            + R+LRYLKGT    ++ K+N    N ++G+ D+DWAGS  DRKSTTG+       NL+ 
Sbjct: 1221 LKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLIC 1280

Query: 72   WKSKKQNVVARSSAEAEYRAMASTASELIWIKHLLHDMQIECSEPIQMFCDNQAARHIAS 131
            W +K+QN VA SS EAEY A+     E +W+K LL  + I+   PI+++ DNQ    IA+
Sbjct: 1281 WNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINIKLENPIKIYEDNQGCISIAN 1340

Query: 132  NPVFHERTKHIEVDCHFIRDKVQSKEIEIPFIRSQEQLADIFTKALDKKTSQQILSKLG 187
            NP  H+R KHI++  HF R++VQ+  I + +I ++ QLADIFTK L      ++  KLG
Sbjct: 1341 NPSCHKRAKHIDIKYHFAREQVQNNVICLEYIPTENQLADIFTKPLPAARFVELRDKLG 1399

BLAST of MELO.jh033600.1 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.4e-28
Identity = 69/183 (37.70%), Postives = 108/183 (59.02%), Query Frame = 0

Query: 8    HMEAINRILRYLKGTPGQGILMKQNSTNTVVGFSDADWAGSCD-RKSTTGFCTFVGGNLV 67
            H EA+  ILRYL+GT G   L    S   + G++DAD AG  D RKS+TG+     G  +
Sbjct: 1147 HWEAVKWILRYLRGTTGD-CLCFGGSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAI 1206

Query: 68   TWKSKKQNVVARSSAEAEYRAMASTASELIWIKHLLHDMQIECSEPIQMFCDNQAARHIA 127
            +W+SK Q  VA S+ EAEY A   T  E+IW+K  L ++ +   E + ++CD+Q+A  ++
Sbjct: 1207 SWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLHQKEYV-VYCDSQSAIDLS 1266

Query: 128  SNPVFHERTKHIEVDCHFIRDKVQSKEIEIPFIRSQEQLADIFTKALDKKTSQQILSKLG 187
             N ++H RTKHI+V  H+IR+ V  + +++  I + E  AD+ TK + +   +     +G
Sbjct: 1267 KNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVVPRNKFELCKELVG 1326

Query: 188  AHN 190
             H+
Sbjct: 1327 MHS 1327

BLAST of MELO.jh033600.1 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 5.6e-22
Identity = 49/98 (50.00%), Postives = 68/98 (69.39%), Query Frame = 0

Query: 1   MHAPRTCHMEAINRILRYLKGTPGQGILMKQNSTNTVVGFSDADWAG-SCDRKSTTGFCT 60
           MH P     + + R+LRY+KGT   G+ + +NS   V  F D+DWAG +  R+STTGFCT
Sbjct: 128 MHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCT 187

Query: 61  FVGGNLVTWKSKKQNVVARSSAEAEYRAMASTASELIW 98
           F+G N+++W +K+Q  V+RSS E EYRA+A TA+EL W
Sbjct: 188 FLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

BLAST of MELO.jh033600.1 vs. ExPASy TrEMBL
Match: A0A5A7SYC4 (Copia-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold18G00190 PE=4 SV=1)

HSP 1 Score: 428 bits (1101), Expect = 1.43e-142
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0

Query: 1   MHAPRTCHMEAINRILRYLKGTPGQGILMKQNSTNTVVGFSDADWAGSCDRKSTTGFCTF 60
           MHAPRTCHMEAINRILRYLKGTPGQGILMKQNSTNTVVGFSDADWAGSCDRKSTTGFCTF
Sbjct: 666 MHAPRTCHMEAINRILRYLKGTPGQGILMKQNSTNTVVGFSDADWAGSCDRKSTTGFCTF 725

Query: 61  VGGNLVTWKSKKQNVVARSSAEAEYRAMASTASELIWIKHLLHDMQIECSEPIQMFCDNQ 120
           VGGNLVTWKSKKQNVVARSSAEAEYRAMASTASELIWIKHLLHDMQIECSEPIQMFCDNQ
Sbjct: 726 VGGNLVTWKSKKQNVVARSSAEAEYRAMASTASELIWIKHLLHDMQIECSEPIQMFCDNQ 785

Query: 121 AARHIASNPVFHERTKHIEVDCHFIRDKVQSKEIEIPFIRSQEQLADIFTKALDKKTSQQ 180
           AARHIASNPVFHERTKHIEVDCHFIRDKVQSKEIEIPFIRSQEQLADIFTKALDKKTSQQ
Sbjct: 786 AARHIASNPVFHERTKHIEVDCHFIRDKVQSKEIEIPFIRSQEQLADIFTKALDKKTSQQ 845

Query: 181 ILSKLGAHNLFEPNLRGSIEGLRSELMASDS 211
           ILSKLGAHNLFEPNLRGSIEGLRSELMASDS
Sbjct: 846 ILSKLGAHNLFEPNLRGSIEGLRSELMASDS 876

BLAST of MELO.jh033600.1 vs. ExPASy TrEMBL
Match: A0A5D3DP15 (Copia-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold187G00090 PE=4 SV=1)

HSP 1 Score: 428 bits (1101), Expect = 1.82e-141
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0

Query: 1   MHAPRTCHMEAINRILRYLKGTPGQGILMKQNSTNTVVGFSDADWAGSCDRKSTTGFCTF 60
           MHAPRTCHMEAINRILRYLKGTPGQGILMKQNSTNTVVGFSDADWAGSCDRKSTTGFCTF
Sbjct: 770 MHAPRTCHMEAINRILRYLKGTPGQGILMKQNSTNTVVGFSDADWAGSCDRKSTTGFCTF 829

Query: 61  VGGNLVTWKSKKQNVVARSSAEAEYRAMASTASELIWIKHLLHDMQIECSEPIQMFCDNQ 120
           VGGNLVTWKSKKQNVVARSSAEAEYRAMASTASELIWIKHLLHDMQIECSEPIQMFCDNQ
Sbjct: 830 VGGNLVTWKSKKQNVVARSSAEAEYRAMASTASELIWIKHLLHDMQIECSEPIQMFCDNQ 889

Query: 121 AARHIASNPVFHERTKHIEVDCHFIRDKVQSKEIEIPFIRSQEQLADIFTKALDKKTSQQ 180
           AARHIASNPVFHERTKHIEVDCHFIRDKVQSKEIEIPFIRSQEQLADIFTKALDKKTSQQ
Sbjct: 890 AARHIASNPVFHERTKHIEVDCHFIRDKVQSKEIEIPFIRSQEQLADIFTKALDKKTSQQ 949

Query: 181 ILSKLGAHNLFEPNLRGSIEGLRSELMASDS 211
           ILSKLGAHNLFEPNLRGSIEGLRSELMASDS
Sbjct: 950 ILSKLGAHNLFEPNLRGSIEGLRSELMASDS 980

BLAST of MELO.jh033600.1 vs. ExPASy TrEMBL
Match: A0A1Q3DD67 (Uncharacterized protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_33811 PE=4 SV=1)

HSP 1 Score: 265 bits (678), Expect = 2.62e-86
Identity = 127/193 (65.80%), Postives = 159/193 (82.38%), Query Frame = 0

Query: 1   MHAPRTCHMEAINRILRYLKGTPGQGILMKQNSTNTVVGFSDADWAGS-CDRKSTTGFCT 60
           +HAP   HM+ ++R+LRYLK  PG+GI MK+N    ++G++D DWAG+  DR+ST+GFCT
Sbjct: 84  LHAPTLGHMDLVDRVLRYLKSCPGKGIWMKKNDHTEIIGYADVDWAGNPFDRRSTSGFCT 143

Query: 61  FVGGNLVTWKSKKQNVVARSSAEAEYRAMASTASELIWIKHLLHDMQIECS-EPIQMFCD 120
           FVGGNLVTWKSKKQ+VVARSSAEAEYRAMAS  SELIW++HLL+D+ +     PI+++CD
Sbjct: 144 FVGGNLVTWKSKKQSVVARSSAEAEYRAMASATSELIWLRHLLYDLTLRRPVTPIKLYCD 203

Query: 121 NQAARHIASNPVFHERTKHIEVDCHFIRDKVQSKEIEIPFIRSQEQLADIFTKALDKKTS 180
           NQAA HIASNPVFHERTKHIEVDCHF+R+KVQ K I  P+I+S+EQLAD+FTKAL K T 
Sbjct: 204 NQAAIHIASNPVFHERTKHIEVDCHFVREKVQRKIIMTPYIQSEEQLADVFTKALPKNTF 263

Query: 181 QQILSKLGAHNLF 191
           Q IL+KL   ++F
Sbjct: 264 QNILAKLALIDIF 276

BLAST of MELO.jh033600.1 vs. ExPASy TrEMBL
Match: A0A5N5FZB9 (Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_011621 PE=4 SV=1)

HSP 1 Score: 263 bits (673), Expect = 6.64e-86
Identity = 125/194 (64.43%), Postives = 158/194 (81.44%), Query Frame = 0

Query: 1   MHAPRTCHMEAINRILRYLKGTPGQGILMKQNSTNTVVGFSDADWAGSC-DRKSTTGFCT 60
           MH+P   H+  + RILRYLKG+ G+GILM +N    ++G+ DADWAG+  DRKSTTG+CT
Sbjct: 58  MHSPTIEHLNLVKRILRYLKGSVGRGILMTKNDNTQIMGYCDADWAGNAIDRKSTTGYCT 117

Query: 61  FVGGNLVTWKSKKQNVVARSSAEAEYRAMASTASELIWIKHLLHDMQIECSEPIQMFCDN 120
           FVGGNLVTWKSKKQ V+ARSSAEAEYRAMASTA ELIW+K LL D+ +  ++P+ +FCDN
Sbjct: 118 FVGGNLVTWKSKKQTVIARSSAEAEYRAMASTACELIWLKGLLCDLGVFTTQPMTLFCDN 177

Query: 121 QAARHIASNPVFHERTKHIEVDCHFIRDKVQSKEIEIPFIRSQEQLADIFTKALDKKTSQ 180
           QAA HIASNPVFHERTKHIEVDCH++R++VQS+ I+  +++S +QLADIFTK L     Q
Sbjct: 178 QAAMHIASNPVFHERTKHIEVDCHYVREQVQSQVIQTHYVKSSDQLADIFTKPLASHQFQ 237

Query: 181 QILSKLGAHNLFEP 193
           ++LSKLG+ NL +P
Sbjct: 238 RLLSKLGSINLLDP 251

BLAST of MELO.jh033600.1 vs. ExPASy TrEMBL
Match: A0A5H2YH34 (Seven transmembrane MLO family protein OS=Prunus dulcis OX=3755 GN=Prudu_1474S000500 PE=4 SV=1)

HSP 1 Score: 268 bits (686), Expect = 6.99e-86
Identity = 126/194 (64.95%), Postives = 158/194 (81.44%), Query Frame = 0

Query: 1   MHAPRTCHMEAINRILRYLKGTPGQGILMKQNSTNTVVGFSDADWAGSC-DRKSTTGFCT 60
           MHAP   H+  + RILRYLKG+ G+GI+MK N    ++ ++DADWAG+  DRKSTTG+CT
Sbjct: 204 MHAPTEAHLNVVKRILRYLKGSIGRGIIMKNNGHTQIMAYTDADWAGNAIDRKSTTGYCT 263

Query: 61  FVGGNLVTWKSKKQNVVARSSAEAEYRAMASTASELIWIKHLLHDMQIECSEPIQMFCDN 120
           FVGGN+VTWKSKKQNV+ARSSAEAEYRAMASTA ELIW+K L+ D+    ++P+ +FCDN
Sbjct: 264 FVGGNIVTWKSKKQNVIARSSAEAEYRAMASTACELIWLKSLISDLGFLSNKPMSLFCDN 323

Query: 121 QAARHIASNPVFHERTKHIEVDCHFIRDKVQSKEIEIPFIRSQEQLADIFTKALDKKTSQ 180
           QAA HIASNPVFHERTKHIEVDCH++R++VQSK I+  F RS +QLAD+FTK+L     Q
Sbjct: 324 QAAMHIASNPVFHERTKHIEVDCHYVREQVQSKVIQTTFTRSHDQLADVFTKSLASTQFQ 383

Query: 181 QILSKLGAHNLFEP 193
           ++LSKLG+ N F+P
Sbjct: 384 RLLSKLGSINPFDP 397

BLAST of MELO.jh033600.1 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 161.4 bits (407), Expect = 8.0e-40
Identity = 86/193 (44.56%), Postives = 120/193 (62.18%), Query Frame = 0

Query: 3   APRTCHMEAINRILRYLKGTPGQGILMKQNSTNTVVGFSDADWAGSCD-RKSTTGFCTFV 62
           APR  H +A+ +IL Y+KGT GQG+     +   +  FSDA +    D R+ST G+C F+
Sbjct: 408 APRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFL 467

Query: 63  GGNLVTWKSKKQNVVARSSAEAEYRAMASTASELIWIKHLLHDMQIECSEPIQMFCDNQA 122
           G +L++WKSKKQ VV++SSAEAEYRA++    E++W+     ++Q+  S+P  +FCDN A
Sbjct: 468 GTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTA 527

Query: 123 ARHIASNPVFHERTKHIEVDCHFIRDK-VQSKEIEIPFIRSQEQLADIFTKALD---KKT 182
           A HIA+N VFHERTKHIE DCH +R++ V    +   F    EQ  D FT+ L    + T
Sbjct: 528 AIHIATNAVFHERTKHIESDCHSVRERSVYQATLSYSFQAYDEQ--DGFTEYLSPILRGT 587

Query: 183 SQQILSKLGAHNL 191
              I+S  G   L
Sbjct: 588 IMYIVSMFGLAGL 598

BLAST of MELO.jh033600.1 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 105.9 bits (263), Expect = 4.0e-23
Identity = 49/98 (50.00%), Postives = 68/98 (69.39%), Query Frame = 0

Query: 1   MHAPRTCHMEAINRILRYLKGTPGQGILMKQNSTNTVVGFSDADWAG-SCDRKSTTGFCT 60
           MH P     + + R+LRY+KGT   G+ + +NS   V  F D+DWAG +  R+STTGFCT
Sbjct: 128 MHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCT 187

Query: 61  FVGGNLVTWKSKKQNVVARSSAEAEYRAMASTASELIW 98
           F+G N+++W +K+Q  V+RSS E EYRA+A TA+EL W
Sbjct: 188 FLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

BLAST of MELO.jh033600.1 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 58.5 bits (140), Expect = 7.3e-09
Identity = 27/60 (45.00%), Postives = 38/60 (63.33%), Query Frame = 0

Query: 3  APRTCHMEAINRILRYLKGTPGQGILMKQNSTNTVVGFSDADWAGSCD-RKSTTGFCTFV 62
          A RT  M+A+ ++L Y+KGT GQG+     S   +  F+D+DWA   D R+S TGFC+ V
Sbjct: 23 ASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFADSDWASCPDTRRSVTGFCSLV 82

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0036222.12.95e-142100.00copia-like protein [Cucumis melo var. makuwa][more]
TYK00722.13.77e-141100.00copia-like protein [Cucumis melo var. makuwa] >TYK25285.1 copia-like protein [Cu... [more]
KAF3329755.11.68e-8672.09Copia protein [Carex littledalei][more]
GAV90402.15.42e-8665.80hypothetical protein CFOL_v3_33811, partial [Cephalotus follicularis][more]
KAB2608453.11.37e-8564.43mitochondrial proteinhypothetical protein-like [Pyrus ussuriensis x Pyrus commun... [more]
Match NameE-valueIdentityDescription
Q94HW21.2e-4345.99Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
Q9ZT945.8e-4345.99Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
P041464.4e-3544.13Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
P109781.4e-2837.70Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
P925195.6e-2250.00Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ... [more]
Match NameE-valueIdentityDescription
A0A5A7SYC41.43e-142100.00Copia-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold18G00... [more]
A0A5D3DP151.82e-141100.00Copia-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold187G0... [more]
A0A1Q3DD672.62e-8665.80Uncharacterized protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3... [more]
A0A5N5FZB96.64e-8664.43Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D867... [more]
A0A5H2YH346.99e-8664.95Seven transmembrane MLO family protein OS=Prunus dulcis OX=3755 GN=Prudu_1474S00... [more]
Match NameE-valueIdentityDescription
AT4G23160.18.0e-4044.56cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
ATMG00810.14.0e-2350.00DNA/RNA polymerases superfamily protein [more]
ATMG00240.17.3e-0945.00Gag-Pol-related retrotransposon family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11783SULFOTRANSFERASE SULTcoord: 90..197
NoneNo IPR availablePANTHERPTHR11783:SF268SUBFAMILY NOT NAMEDcoord: 90..197
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 38..176
e-value: 1.3022E-86
score: 250.078
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 8..143

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh033600.1.t1MELO.jh033600.1.t1mRNA