MELO.jh033593.1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh033593.1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial
Location	chr07: 1671265 .. 1674427 (-)
RNA-Seq Expression	MELO.jh033593.1
Synteny	MELO.jh033593.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

AATCTTGATCCGTGGCAATGGCCGCCGTGAGCCGAGCTTCCACTCGAATCCCTCATCTGCTTGCTGCACGGGGAGCTTTGTGTCTTCATACAACAACTCCGGCTTTGTCTTCCTCATCCACTGCTTCTCCGACGCCGTATGCGAGGCCGCTGCCTCCTTCGGCCTCGTCCCCGACGGGGCTTCCGAAGGCGGCTGAGTATGTCATCTCGAAGGTTGACGACCTCATGAACTGGGCTCGCCGTGGTTCTATCTGGCCTATGACGTTCGGCCTTGCTTGTTGCGCTGTTGAAATGATGCACACCGGTGCTGCCCGCTATGACCTCGATCGCTTTGGTGTCATCTTCCGTCCTAGCCCTAGGCAATCTGATTGTATGATTGTCGCCGGTACCCTCACCAACAAGATGGCCCCAGCTCTTCGCAAGTTAGTTCTCTCTTATTCTCTCCATTAAATAAAGCTTGTTGATTCCTGAATTTTTGGACCTGACTGGATAATTGACTGAACTATTAGATTGACGGAAAATTTCATATTGAGATCGAAGTTTAGAATTGTGTGATTTTTCAGTTTCTGGAGCTGTTCCTTTTGTCAATTGTTCCTGGCCTGTAGGTTGTAGTGCGTACTTGTTTTGCCCTTCTAAACTTGTGAAGATATTATTCCCGTCTGCAAAGATAATTCTGAATCTTATGTTATCTAAAAGGTCAAAGGTTTAAGTGGCTTATACCATTGTAATTATCTGCTGTATTTTCTTATTTATTGAATCAAATCAATTTGATTATATGTATTGATTGTCCAGAACACAATGCTTCAGCTTCTATGTCAATGGATTTTAGGGGATGTTATTCTTCTTCATTATGAAAAAAGGTCGATTACTTTTGATATATTGGATTACTTAATTGTGTAGTGCTAATTGGGAAATTTATCTCGTTAATCCATCTTGTTCACCTATTCATGTTATTTATTTTCATGAATTTTCACTCATCACATGACATCCATGGTTTACGAGGAAAATTTGTGAAGTAATCATGAAACTAGTTCTTGTTCAAAGTTTTTTCACTTCATCATCTTGGCATGGTGTCTGAAGAATTCTGTTTGGGTTGAATAATCATGATTTCTGGAACAGTAAAGCATCTATTTATATCTGTTCTATTTGTTCGAGTGGTTAATGTGTCAATGAAGCATGCGACTATTCTGTTTGTTTTGAAGGTTTCCCTTATCCTTGTTTTTTTTAATCTATGAATTTGAAATGTGCATTGTATAGTAAAACTTCCTAATACTGAAATATGTCAAGAAAGTATGCGTTGGGCATCTTTCCAAGTTTGACCAGAATTGCTGGAGTCATTTCACATAAGTAGCCAACTTCTATGTACGAAATTTTTGTTTATCGAGGAAATTGGAACTAAAGCCTAGAGGAATACACCAATTTAGATACAGTATCCCTTCACTTTAGAATTCTTATTGTCTAATCTTGATAGGTAGAAATGAAGTTTTAATATGACCAAGAGAACTCTAACTTCTATTCATGAGGATTTTCTTACAAAAAGCAATAATGACATAAGAAGTGAGTCACAATGATATGCAAATTTCTTTGAACTTTTGGTTTCATTTATATGGTGGTATTGCTTGTAATTGCGGTAGACTATGAAGTCCCTTATTTTGAATGAACTAAGGTTCCCATGTTTTCCTTTTCTGAATCTAGCTCTTTATACCTATGAGGGTTGTAGTGGCTAGTAAGGTTGCCTTTTCAGGATATTAGCTATTTTCTAAAAATATCTCATTGAAATGGTGCATGAATTTGAGAAATGCAATATAGACTGCAATCCAAATAAATGAATGCTACAGAAGCAAATAAAAATTATAATGGAGGAAGACGACCCGAATATTAATCCTTTATCAAAGTTAAATACAATTGTCTCATATTTGTATTTGTTTGTGTCAATGTTTATGTTGCTGCTATGGCAATTTTCAATGTTTAAAAGTCCCATTAATGCTTGACCTGAATGCTCCATGCCTTCATTTATCAAGCTTGGAACTCACACTTCTTGTTGGTGGTTAATGAACCATCTTTGTTGTTGGATCTGAGAATGCTACTATAGTCTAGTTTCAATTTGCTAAGTTTAGGGAATCCCTTGATTGTTACATTGAAGACCAATTTAGTCATATAAATAGGTTATAAATACCACCTGATTTGTTCGTTCCTTTCAATGAAAACTTGAAGAACGACTGTACTTAATTCATTGTTTCTGTAATCTGTTGGGCTCTTCAACAAAGTTGTGGCTTTTAACCCCAAGGATAACCATGGTGGTAAAGGCCTTGGATTCATATAAGTTTTTACTCATGACTGTTAGACATTAAGTCATTAACTGACACACAGGCCTTTATTGCTAGCCCTTGGGTTTTTATTTTTTGAGGCTCTGTTCTGAGATTAATAATGTCTATGATACAATAATGGGAGTATTCTTATCAAGTGATTAAGAGATGAACAACTAGAACTTGTCAGGCTGACTGCGTGTGAGATCCTTTCACCACAAGGGAGGTTTTGGAATCCTCTGAACTAGGCCGATAATTTTTGTCTGTTCAAAATTTTAAATATTTTAATTTTTCTGTTGGGTTTTCTGATAAATCGATTCTCCATCCCACCCAAGCTACACTTACTCTTTGTTCTCTGCAGGGTTTATGATCAAATGCCCGAACCGCGATGGGTTATATCCATGGGAAGCTGCGCAAATGGTGGTGGATACTATCACTACTCATACTCAGTCGTTCGGGATGTGATCGGATTGTCCCTGTCGATATCTACGTTCCTGGTTGCCCTCCTACTGCTGAGGCATTACTTTACGGAATCCTTCAATTGCAGAAGAAGATCAACAGACGCAAAGATTTCCTCCAGTGGTGGACCAAGTGAGACCATCCATCCAAGTCAGGTATTGCTCGTTGGTGGATGCTTCAAACTATAATAAGAACTGTATTACAAGTTTGTGGTAATGTAATAGAAGAGATTATGAGTGATGTTTCAATAAGACCCCACAACTGATCCTCCTTGATGATGTTTTTTCCCCGTTTTCTGTTTATCTCCCCCATGTTATATGGTGCCTTTGGATGGCAAAGAATTATATGTATCTCTTCAAATTTGGAGTTCACTAAACACTTCCTGAATTTTTCAACTTA

mRNA sequence

AATCTTGATCCGTGGCAATGGCCGCCGTGAGCCGAGCTTCCACTCGAATCCCTCATCTGCTTGCTGCACGGGGAGCTTTGTGTCTTCATACAACAACTCCGGCTTTGTCTTCCTCATCCACTGCTTCTCCGACGCCGTATGCGAGGCCGCTGCCTCCTTCGGCCTCGTCCCCGACGGGGCTTCCGAAGGCGGCTGAGTATGTCATCTCGAAGGTTGACGACCTCATGAACTGGGCTCGCCGTGGTTCTATCTGGCCTATGACGTTCGGCCTTGCTTGTTGCGCTGTTGAAATGATGCACACCGGTGCTGCCCGCTATGACCTCGATCGCTTTGGTGTCATCTTCCGTCCTAGCCCTAGGCAATCTGATTGTATGATTGTCGCCGGTACCCTCACCAACAAGATGGCCCCAGCTCTTCGCAAGGTTTATGATCAAATGCCCGAACCGCGATGGGTTATATCCATGGGAAGCTGCGCAAATGGTGGTGGATACTATCACTACTCATACTCAGTCGTTCGGGATGTGATCGGATTGTCCCTGTCGATATCTACGTTCCTGGTTGCCCTCCTACTGCTGAGGCATTACTTTACGGAATCCTTCAATTGCAGAAGAAGATCAACAGACGCAAAGATTTCCTCCAGTGGTGGACCAAGTGAGACCATCCATCCAAGTCAGGTATTGCTCGTTGGTGGATGCTTCAAACTATAATAAGAACTGTATTACAAGTTTGTGGTAATGTAATAGAAGAGATTATGAGTGATGTTTCAATAAGACCCCACAACTGATCCTCCTTGATGATGTTTTTTCCCCGTTTTCTGTTTATCTCCCCCATGTTATATGGTGCCTTTGGATGGCAAAGAATTATATGTATCTCTTCAAATTTGGAGTTCACTAAACACTTCCTGAATTTTTCAACTTA

Coding sequence (CDS)

ATGGCCGCCGTGAGCCGAGCTTCCACTCGAATCCCTCATCTGCTTGCTGCACGGGGAGCTTTGTGTCTTCATACAACAACTCCGGCTTTGTCTTCCTCATCCACTGCTTCTCCGACGCCGTATGCGAGGCCGCTGCCTCCTTCGGCCTCGTCCCCGACGGGGCTTCCGAAGGCGGCTGAGTATGTCATCTCGAAGGTTGACGACCTCATGAACTGGGCTCGCCGTGGTTCTATCTGGCCTATGACGTTCGGCCTTGCTTGTTGCGCTGTTGAAATGATGCACACCGGTGCTGCCCGCTATGACCTCGATCGCTTTGGTGTCATCTTCCGTCCTAGCCCTAGGCAATCTGATTGTATGATTGTCGCCGGTACCCTCACCAACAAGATGGCCCCAGCTCTTCGCAAGGTTTATGATCAAATGCCCGAACCGCGATGGGTTATATCCATGGGAAGCTGCGCAAATGGTGGTGGATACTATCACTACTCATACTCAGTCGTTCGGGATGTGATCGGATTGTCCCTGTCGATATCTACGTTCCTGGTTGCCCTCCTACTGCTGAGGCATTACTTTACGGAATCCTTCAATTGCAGAAGAAGATCAACAGACGCAAAGATTTCCTCCAGTGGTGGACCAAGTGAGACCATCCATCCAAGTCAGGTATTGCTCGTTGGTGGATGCTTCAAACTATAA

Protein sequence

MAAVSRASTRIPHLLAARGALCLHTTTPALSSSSTASPTPYARPLPPSASSPTGLPKAAEYVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRDVIGLSLSISTFLVALLLLRHYFTESFNCRRRSTDAKISSSGGPSETIHPSQVLLVGGCFKL

Homology

[Close]

BLAST of MELO.jh033593.1 vs. NCBI nr
Match: XP_008452704.1 (PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial [Cucumis melo] >KAA0064489.1 NADH dehydrogenase (ubiquinone) iron-sulfur protein 7 [Cucumis melo var. makuwa] >TYK20101.1 NADH dehydrogenase (ubiquinone) iron-sulfur protein 7 [Cucumis melo var. makuwa])

HSP 1 Score: 336 bits (862), Expect = 1.26e-114
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MAAVSRASTRIPHLLAARGALCLHTTTPALSSSSTASPTPYARPLPPSASSPTGLPKAAE 60
           MAAVSRASTRIPHLLAARGALCLHTTTPALSSSSTASPTPYARPLPPSASSPTGLPKAAE
Sbjct: 1   MAAVSRASTRIPHLLAARGALCLHTTTPALSSSSTASPTPYARPLPPSASSPTGLPKAAE 60

Query: 61  YVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGVIFRPSPRQSDCMI 120
           YVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGVIFRPSPRQSDCMI
Sbjct: 61  YVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGVIFRPSPRQSDCMI 120

Query: 121 VAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVR 167
           VAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVR
Sbjct: 121 VAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVR 167

[Close]

BLAST of MELO.jh033593.1 vs. NCBI nr
Match: XP_004141310.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial [Cucumis sativus] >KGN55322.1 hypothetical protein Csa_012723 [Cucumis sativus])

HSP 1 Score: 330 bits (847), Expect = 2.42e-112
Identity = 165/167 (98.80%), Postives = 165/167 (98.80%), Query Frame = 0


Query: 1   MAAVSRASTRIPHLLAARGALCLHTTTPALSSSSTASPTPYARPLPPSASSPTGLPKAAE 60
           MAAVSRASTRIPHLLAARGAL LHTT PALSSSSTASPTPYARPLPPSASSPTGLPKAAE
Sbjct: 1   MAAVSRASTRIPHLLAARGALSLHTTAPALSSSSTASPTPYARPLPPSASSPTGLPKAAE 60

Query: 61  YVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGVIFRPSPRQSDCMI 120
           YVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGVIFRPSPRQSDCMI
Sbjct: 61  YVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGVIFRPSPRQSDCMI 120

Query: 121 VAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVR 167
           VAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVR
Sbjct: 121 VAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVR 167

[Close]

BLAST of MELO.jh033593.1 vs. NCBI nr
Match: XP_038897936.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial [Benincasa hispida])

HSP 1 Score: 327 bits (839), Expect = 4.00e-111
Identity = 163/167 (97.60%), Postives = 163/167 (97.60%), Query Frame = 0


Query: 1   MAAVSRASTRIPHLLAARGALCLHTTTPALSSSSTASPTPYARPLPPSASSPTGLPKAAE 60
           MAAVSRASTRIPHLLAARGA  LHTT PALSSSSTASPTPY RPLPPSASSPTGLPKAAE
Sbjct: 1   MAAVSRASTRIPHLLAARGAFSLHTTAPALSSSSTASPTPYTRPLPPSASSPTGLPKAAE 60

Query: 61  YVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGVIFRPSPRQSDCMI 120
           YVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGVIFRPSPRQSDCMI
Sbjct: 61  YVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGVIFRPSPRQSDCMI 120

Query: 121 VAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVR 167
           VAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVR
Sbjct: 121 VAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVR 167

[Close]

BLAST of MELO.jh033593.1 vs. NCBI nr
Match: XP_022936396.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial [Cucurbita moschata] >XP_023534809.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial-like [Cucurbita pepo subsp. pepo] >KAG6591456.1 hypothetical protein SDJN03_13802, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 322 bits (826), Expect = 3.81e-109
Identity = 160/167 (95.81%), Postives = 162/167 (97.01%), Query Frame = 0


Query: 1   MAAVSRASTRIPHLLAARGALCLHTTTPALSSSSTASPTPYARPLPPSASSPTGLPKAAE 60
           MAAVSRASTRIPHLLAARGA  LHTT PALSSSSTASPTPYARP PPS SSPTGLPKAAE
Sbjct: 1   MAAVSRASTRIPHLLAARGAFSLHTTAPALSSSSTASPTPYARPPPPSTSSPTGLPKAAE 60

Query: 61  YVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGVIFRPSPRQSDCMI 120
           YVISKVDDL+NWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGVIFRPSPRQSDCMI
Sbjct: 61  YVISKVDDLLNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGVIFRPSPRQSDCMI 120

Query: 121 VAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVR 167
           VAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSY+VVR
Sbjct: 121 VAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYAVVR 167

[Close]

BLAST of MELO.jh033593.1 vs. NCBI nr
Match: XP_022977107.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial [Cucurbita maxima])

HSP 1 Score: 321 bits (822), Expect = 1.55e-108
Identity = 159/167 (95.21%), Postives = 161/167 (96.41%), Query Frame = 0


Query: 1   MAAVSRASTRIPHLLAARGALCLHTTTPALSSSSTASPTPYARPLPPSASSPTGLPKAAE 60
           MAAVSRASTRIPHLLAARG   LHTT PALSSSSTASPTPYARP PPS SSPTGLPKAAE
Sbjct: 1   MAAVSRASTRIPHLLAARGVFSLHTTAPALSSSSTASPTPYARPPPPSTSSPTGLPKAAE 60

Query: 61  YVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGVIFRPSPRQSDCMI 120
           YVISKVDDL+NWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGVIFRPSPRQSDCMI
Sbjct: 61  YVISKVDDLLNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGVIFRPSPRQSDCMI 120

Query: 121 VAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVR 167
           VAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSY+VVR
Sbjct: 121 VAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYAVVR 167

[Close]

BLAST of MELO.jh033593.1 vs. ExPASy Swiss-Prot
Match: Q42577 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g11770 PE=1 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 2.7e-70
Identity = 138/175 (78.86%), Postives = 149/175 (85.14%), Query Frame = 0


Query: 1   MAAVSR-ASTRIPHLLAARGALC------LHTTTPALSSSSTASPTPYARPLPPSAS-SP 60
           MA ++R  +TR+P LL ++ A+       LHT+ PALS S+  SPT Y RP PPS S  P
Sbjct: 1   MAMITRNTATRLPLLLQSQRAVAAASVSHLHTSLPALSPST--SPTSYTRPGPPSTSPPP 60

Query: 61  TGLPKAAEYVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGVIFRPS 120
            GL KAAE+VISKVDDLMNWAR GSIWPMTFGLACCAVEMMHTGAARYDLDRFG+IFRPS
Sbjct: 61  PGLSKAAEFVISKVDDLMNWARTGSIWPMTFGLACCAVEMMHTGAARYDLDRFGIIFRPS 120

Query: 121 PRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVR 168
           PRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVR
Sbjct: 121 PRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVR 173

[Close]

BLAST of MELO.jh033593.1 vs. ExPASy Swiss-Prot
Match: P42027 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial OS=Brassica oleracea OX=3712 PE=1 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 3.5e-70
Identity = 136/172 (79.07%), Postives = 148/172 (86.05%), Query Frame = 0


Query: 1   MAAVSR-ASTRIPHLLAARGALC---LHTTTPALSSSSTASPTPYARPLPPSASS-PTGL 60
           MA ++R  +TR+P +L +  A     LHT+ PALS ++T  PT Y RP PPS S+ P GL
Sbjct: 1   MAMITRNTATRLPLVLQSHRAAAVSHLHTSLPALSPATT--PTSYTRPGPPSTSAPPPGL 60

Query: 61  PKAAEYVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGVIFRPSPRQ 120
            K AE+VISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFG+IFRPSPRQ
Sbjct: 61  SKTAEFVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQ 120

Query: 121 SDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVR 168
           SDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVR
Sbjct: 121 SDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVR 170

[Close]

BLAST of MELO.jh033593.1 vs. ExPASy Swiss-Prot
Match: Q43844 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial OS=Solanum tuberosum OX=4113 PE=2 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 6.9e-66
Identity = 119/148 (80.41%), Postives = 127/148 (85.81%), Query Frame = 0


Query: 20  ALCLHTTTPALSSSSTASPTPYARPLPPSASSPTGLPKAAEYVISKVDDLMNWARRGSIW 79
           A  +HTT P+LS    +SP       PPS ++P G+ K AEYVISKVDDLMNWARRGSIW
Sbjct: 21  AATIHTTLPSLSQQPASSPATSGGAQPPSMNTPAGISKPAEYVISKVDDLMNWARRGSIW 80

Query: 80  PMTFGLACCAVEMMHTGAARYDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQ 139
           PMTFGLACCAVEMMH GAARYD DRFG+IFRPSPRQSD MIVAGTLTNKMAPALRKVYDQ
Sbjct: 81  PMTFGLACCAVEMMHAGAARYDFDRFGIIFRPSPRQSDVMIVAGTLTNKMAPALRKVYDQ 140

Query: 140 MPEPRWVISMGSCANGGGYYHYSYSVVR 168
           MPEPRWVISMGSCANGGGYYHYSY+VVR
Sbjct: 141 MPEPRWVISMGSCANGGGYYHYSYAVVR 168

[Close]

BLAST of MELO.jh033593.1 vs. ExPASy Swiss-Prot
Match: O21272 (NADH-ubiquinone oxidoreductase 20 kDa subunit OS=Reclinomonas americana OX=48483 GN=NAD10 PE=3 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 4.2e-55
Identity = 93/108 (86.11%), Postives = 105/108 (97.22%), Query Frame = 0


Query: 60  EYVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGVIFRPSPRQSDCM 119
           E+++SK+D+L+NWAR+GS+WPMTFGLACCAVEMMH+ A+RYDLDRFG+IFRPSPRQSD M
Sbjct: 30  EFIVSKMDELVNWARKGSLWPMTFGLACCAVEMMHSAASRYDLDRFGIIFRPSPRQSDVM 89

Query: 120 IVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVR 168
           IVAGTLTNKMAPALRKVYDQM EPRWV+SMGSCANGGGYYHYSYSVVR
Sbjct: 90  IVAGTLTNKMAPALRKVYDQMSEPRWVVSMGSCANGGGYYHYSYSVVR 137

[Close]

BLAST of MELO.jh033593.1 vs. ExPASy Swiss-Prot
Match: P42026 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial OS=Bos taurus OX=9913 GN=NDUFS7 PE=1 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 7.1e-55
Identity = 105/146 (71.92%), Postives = 119/146 (81.51%), Query Frame = 0


Query: 23  LHTTTPALSSSSTASPTPYARPLPPSASSPTGLPKA-AEYVISKVDDLMNWARRGSIWPM 82
           +H++  A S SST      AR + P    P  LP +  EYV++K+DDL+NWARR S+WPM
Sbjct: 29  VHSSMAADSPSSTQPAVSQARAVVP---KPAALPSSRGEYVVAKLDDLINWARRSSLWPM 88

Query: 83  TFGLACCAVEMMHTGAARYDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMP 142
           TFGLACCAVEMMH  A RYD+DRFGV+FR SPRQSD MIVAGTLTNKMAPALRKVYDQMP
Sbjct: 89  TFGLACCAVEMMHMAAPRYDMDRFGVVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMP 148

Query: 143 EPRWVISMGSCANGGGYYHYSYSVVR 168
           EPR+V+SMGSCANGGGYYHYSYSVVR
Sbjct: 149 EPRYVVSMGSCANGGGYYHYSYSVVR 171

[Close]

BLAST of MELO.jh033593.1 vs. ExPASy TrEMBL
Match: A0A5D3D968 (NADH dehydrogenase (Ubiquinone) iron-sulfur protein 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002250 PE=3 SV=1)

HSP 1 Score: 336 bits (862), Expect = 6.09e-115
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MAAVSRASTRIPHLLAARGALCLHTTTPALSSSSTASPTPYARPLPPSASSPTGLPKAAE 60
           MAAVSRASTRIPHLLAARGALCLHTTTPALSSSSTASPTPYARPLPPSASSPTGLPKAAE
Sbjct: 1   MAAVSRASTRIPHLLAARGALCLHTTTPALSSSSTASPTPYARPLPPSASSPTGLPKAAE 60

Query: 61  YVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGVIFRPSPRQSDCMI 120
           YVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGVIFRPSPRQSDCMI
Sbjct: 61  YVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGVIFRPSPRQSDCMI 120

Query: 121 VAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVR 167
           VAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVR
Sbjct: 121 VAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVR 167

[Close]

BLAST of MELO.jh033593.1 vs. ExPASy TrEMBL
Match: A0A1S3BUF1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103493646 PE=3 SV=1)

HSP 1 Score: 336 bits (862), Expect = 6.09e-115
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MAAVSRASTRIPHLLAARGALCLHTTTPALSSSSTASPTPYARPLPPSASSPTGLPKAAE 60
           MAAVSRASTRIPHLLAARGALCLHTTTPALSSSSTASPTPYARPLPPSASSPTGLPKAAE
Sbjct: 1   MAAVSRASTRIPHLLAARGALCLHTTTPALSSSSTASPTPYARPLPPSASSPTGLPKAAE 60

Query: 61  YVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGVIFRPSPRQSDCMI 120
           YVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGVIFRPSPRQSDCMI
Sbjct: 61  YVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGVIFRPSPRQSDCMI 120

Query: 121 VAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVR 167
           VAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVR
Sbjct: 121 VAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVR 167

[Close]

BLAST of MELO.jh033593.1 vs. ExPASy TrEMBL
Match: A0A0A0L3Y8 (Oxidored_q6 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G645960 PE=3 SV=1)

HSP 1 Score: 330 bits (847), Expect = 1.17e-112
Identity = 165/167 (98.80%), Postives = 165/167 (98.80%), Query Frame = 0


Query: 1   MAAVSRASTRIPHLLAARGALCLHTTTPALSSSSTASPTPYARPLPPSASSPTGLPKAAE 60
           MAAVSRASTRIPHLLAARGAL LHTT PALSSSSTASPTPYARPLPPSASSPTGLPKAAE
Sbjct: 1   MAAVSRASTRIPHLLAARGALSLHTTAPALSSSSTASPTPYARPLPPSASSPTGLPKAAE 60

Query: 61  YVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGVIFRPSPRQSDCMI 120
           YVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGVIFRPSPRQSDCMI
Sbjct: 61  YVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGVIFRPSPRQSDCMI 120

Query: 121 VAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVR 167
           VAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVR
Sbjct: 121 VAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVR 167

[Close]

BLAST of MELO.jh033593.1 vs. ExPASy TrEMBL
Match: A0A6J1F7C6 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111443026 PE=3 SV=1)

HSP 1 Score: 322 bits (826), Expect = 1.84e-109
Identity = 160/167 (95.81%), Postives = 162/167 (97.01%), Query Frame = 0


Query: 1   MAAVSRASTRIPHLLAARGALCLHTTTPALSSSSTASPTPYARPLPPSASSPTGLPKAAE 60
           MAAVSRASTRIPHLLAARGA  LHTT PALSSSSTASPTPYARP PPS SSPTGLPKAAE
Sbjct: 1   MAAVSRASTRIPHLLAARGAFSLHTTAPALSSSSTASPTPYARPPPPSTSSPTGLPKAAE 60

Query: 61  YVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGVIFRPSPRQSDCMI 120
           YVISKVDDL+NWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGVIFRPSPRQSDCMI
Sbjct: 61  YVISKVDDLLNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGVIFRPSPRQSDCMI 120

Query: 121 VAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVR 167
           VAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSY+VVR
Sbjct: 121 VAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYAVVR 167

[Close]

BLAST of MELO.jh033593.1 vs. ExPASy TrEMBL
Match: A0A6J1IHI6 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111477275 PE=3 SV=1)

HSP 1 Score: 321 bits (822), Expect = 7.50e-109
Identity = 159/167 (95.21%), Postives = 161/167 (96.41%), Query Frame = 0


Query: 1   MAAVSRASTRIPHLLAARGALCLHTTTPALSSSSTASPTPYARPLPPSASSPTGLPKAAE 60
           MAAVSRASTRIPHLLAARG   LHTT PALSSSSTASPTPYARP PPS SSPTGLPKAAE
Sbjct: 1   MAAVSRASTRIPHLLAARGVFSLHTTAPALSSSSTASPTPYARPPPPSTSSPTGLPKAAE 60

Query: 61  YVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGVIFRPSPRQSDCMI 120
           YVISKVDDL+NWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGVIFRPSPRQSDCMI
Sbjct: 61  YVISKVDDLLNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGVIFRPSPRQSDCMI 120

Query: 121 VAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVR 167
           VAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSY+VVR
Sbjct: 121 VAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYAVVR 167

[Close]

BLAST of MELO.jh033593.1 vs. TAIR 10
Match: AT5G11770.1 (NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial )

HSP 1 Score: 266.5 bits (680), Expect = 1.9e-71
Identity = 138/175 (78.86%), Postives = 149/175 (85.14%), Query Frame = 0


Query: 1   MAAVSR-ASTRIPHLLAARGALC------LHTTTPALSSSSTASPTPYARPLPPSAS-SP 60
           MA ++R  +TR+P LL ++ A+       LHT+ PALS S+  SPT Y RP PPS S  P
Sbjct: 1   MAMITRNTATRLPLLLQSQRAVAAASVSHLHTSLPALSPST--SPTSYTRPGPPSTSPPP 60

Query: 61  TGLPKAAEYVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGVIFRPS 120
            GL KAAE+VISKVDDLMNWAR GSIWPMTFGLACCAVEMMHTGAARYDLDRFG+IFRPS
Sbjct: 61  PGLSKAAEFVISKVDDLMNWARTGSIWPMTFGLACCAVEMMHTGAARYDLDRFGIIFRPS 120

Query: 121 PRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVR 168
           PRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVR
Sbjct: 121 PRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVR 173

[Close]

BLAST of MELO.jh033593.1 vs. TAIR 10
Match: ATCG00430.1 (photosystem II reaction center protein G )

HSP 1 Score: 121.7 bits (304), Expect = 7.6e-28
Identity = 51/109 (46.79%), Postives = 79/109 (72.48%), Query Frame = 0


Query: 62  VISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGVIFRPSPRQSDCMIV 121
           + + ++DL NW+R  S+WP+ +G +CC +E      +R+D DR+G++ R SPRQ+D ++ 
Sbjct: 18  ISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILT 77

Query: 122 AGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHY-SYSVVRDV 170
           AGT+T KMAP+L ++Y+QMPEP++VI+MG+C   GG +   SYS VR V
Sbjct: 78  AGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGV 126

The following BLAST results are available for this feature:

BLAST of MELO.jh033593.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008452704.1	1.26e-114	100.00	PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial ...	[more]
XP_004141310.1	2.42e-112	98.80	NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial [Cucumis sa...	[more]
XP_038897936.1	4.00e-111	97.60	NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial [Benincasa ...	[more]
XP_022936396.1	3.81e-109	95.81	NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial [Cucurbita ...	[more]
XP_022977107.1	1.55e-108	95.21	NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial [Cucurbita ...	[more]

BLAST of MELO.jh033593.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q42577	2.7e-70	78.86	NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial OS=Arabidop...	[more]
P42027	3.5e-70	79.07	NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial OS=Brassica...	[more]
Q43844	6.9e-66	80.41	NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial OS=Solanum ...	[more]
O21272	4.2e-55	86.11	NADH-ubiquinone oxidoreductase 20 kDa subunit OS=Reclinomonas americana OX=48483...	[more]
P42026	7.1e-55	71.92	NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial OS=Bos taur...	[more]

BLAST of MELO.jh033593.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D968	6.09e-115	100.00	NADH dehydrogenase (Ubiquinone) iron-sulfur protein 7 OS=Cucumis melo var. makuw...	[more]
A0A1S3BUF1	6.09e-115	100.00	NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial OS=Cucumis ...	[more]
A0A0A0L3Y8	1.17e-112	98.80	Oxidored_q6 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G645960...	[more]
A0A6J1F7C6	1.84e-109	95.81	NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial OS=Cucurbit...	[more]
A0A6J1IHI6	7.50e-109	95.21	NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial OS=Cucurbit...	[more]

BLAST of MELO.jh033593.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11770.1	1.9e-71	78.86	NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial	[more]
ATCG00430.1	7.6e-28	46.79	photosystem II reaction center protein G	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006138	NADH-ubiquinone oxidoreductase, 20 Kd subunit	TIGRFAM	TIGR01957	TIGR01957	coord: 62..169 e-value: 2.0E-55 score: 184.7
IPR006137	NADH:ubiquinone oxidoreductase-like, 20kDa subunit	PFAM	PF01058	Oxidored_q6	coord: 87..163 e-value: 3.4E-10 score: 39.9
None	No IPR available	GENE3D	3.40.50.12280		coord: 53..174 e-value: 7.9E-59 score: 199.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..54
None	No IPR available	PANTHER	PTHR11995:SF28	NADH DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN 7, MITOCHONDRIAL	coord: 2..172
None	No IPR available	PANTHER	PTHR11995	NADH DEHYDROGENASE	coord: 2..172
None	No IPR available	SUPERFAMILY	56770	HydA/Nqo6-like	coord: 60..169

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO.jh033593.1.t1	MELO.jh033593.1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0051536	iron-sulfur cluster binding
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity
molecular_function	GO:0048038	quinone binding