MELO.jh033446.1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh033446.1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Unknown protein
Location	chr05: 12085939 .. 12086106 (+)
RNA-Seq Expression	MELO.jh033446.1
Synteny	MELO.jh033446.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCCAACAGAGGGCCACCCACTTCGTTAGCAATAGTGACTGTAGTTTTCGGTAAAAGTGAGATCAATTCATCTGTGGCACTCAAGCTAATGGGTAGCAACAAGAACATTGAGAATGCAAGTGCTAAAAAATGAGTTTATTACTTAGGTAAGAAAATATTGAAAATG

mRNA sequence

ATGCCCAACAGAGGGCCACCCACTTCGTTAGCAATAGTGACTGTAGTTTTCGGTAAAAGTGAGATCAATTCATCTGTGGCACTCAAGCTAATGGGTAGCAACAAGAACATTGAGAATGCAAGTGCTAAAAAATGAGTTTATTACTTAGGTAAGAAAATATTGAAAATG

Coding sequence (CDS)

ATGCCCAACAGAGGGCCACCCACTTCGTTAGCAATAGTGACTGTAGTTTTCGGTAAAAGTGAGATCAATTCATCTGTGGCACTCAAGCTAATGGGTAGCAACAAGAACATTGAGAATGCAAGTGCTAAAAAATGA

Protein sequence

MPNRGPPTSLAIVTVVFGKSEINSSVALKLMGSNKNIENASAKK

Homology

[Close]

BLAST of MELO.jh033446.1 vs. NCBI nr
Match: KAA0056202.1 (hypothetical protein E6C27_scaffold431G00300 [Cucumis melo var. makuwa])

HSP 1 Score: 71.2 bits (173), Expect = 6.11e-14
Identity = 37/43 (86.05%), Postives = 38/43 (88.37%), Query Frame = 0


Query: 1  MPNRGPPTSLAIVTVVFGKSEINSSVALKLMGSNKNIENASAK 43
          MPNRGPPTSL IVTVV GKSEINSSVA KL G+NKNIENA AK
Sbjct: 1  MPNRGPPTSLTIVTVVSGKSEINSSVACKLKGNNKNIENAIAK 43

[Close]

BLAST of MELO.jh033446.1 vs. NCBI nr
Match: KAA0056685.1 (hypothetical protein E6C27_scaffold73G00110 [Cucumis melo var. makuwa])

HSP 1 Score: 71.2 bits (173), Expect = 1.58e-13
Identity = 36/43 (83.72%), Postives = 38/43 (88.37%), Query Frame = 0


Query: 1  MPNRGPPTSLAIVTVVFGKSEINSSVALKLMGSNKNIENASAK 43
          MPNRGPPTSL IVT+V GKSEINSSVA KL G+NKNIENA AK
Sbjct: 1  MPNRGPPTSLTIVTIVSGKSEINSSVACKLKGNNKNIENAMAK 43

[Close]

BLAST of MELO.jh033446.1 vs. NCBI nr
Match: KAA0056694.1 (hypothetical protein E6C27_scaffold73G00220 [Cucumis melo var. makuwa])

HSP 1 Score: 71.2 bits (173), Expect = 3.03e-13
Identity = 37/43 (86.05%), Postives = 38/43 (88.37%), Query Frame = 0


Query: 1  MPNRGPPTSLAIVTVVFGKSEINSSVALKLMGSNKNIENASAK 43
          MPNRGPPTSL IVTVV GKSEINSSVA KL G+NKNIENA AK
Sbjct: 1  MPNRGPPTSLTIVTVVSGKSEINSSVACKLKGNNKNIENAIAK 43

[Close]

BLAST of MELO.jh033446.1 vs. NCBI nr
Match: KAA0031863.1 (hypothetical protein E6C27_scaffold480G00100 [Cucumis melo var. makuwa])

HSP 1 Score: 69.3 bits (168), Expect = 1.07e-12
Identity = 36/43 (83.72%), Postives = 38/43 (88.37%), Query Frame = 0


Query: 1  MPNRGPPTSLAIVTVVFGKSEINSSVALKLMGSNKNIENASAK 43
          MP+RGPPTSL IVTVV GKSEINSSVA KL G+NKNIENA AK
Sbjct: 1  MPSRGPPTSLTIVTVVSGKSEINSSVACKLKGNNKNIENAIAK 43

[Close]

BLAST of MELO.jh033446.1 vs. NCBI nr
Match: KAA0046098.1 (hypothetical protein E6C27_scaffold157G00210 [Cucumis melo var. makuwa])

HSP 1 Score: 68.9 bits (167), Expect = 1.85e-12
Identity = 36/43 (83.72%), Postives = 37/43 (86.05%), Query Frame = 0


Query: 1  MPNRGPPTSLAIVTVVFGKSEINSSVALKLMGSNKNIENASAK 43
          MPNRGPPTSL IVTVV GKSEINS VA KL G+NKNIENA AK
Sbjct: 1  MPNRGPPTSLTIVTVVSGKSEINSFVACKLKGNNKNIENAIAK 43

[Close]

BLAST of MELO.jh033446.1 vs. ExPASy TrEMBL
Match: A0A5A7UK03 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold431G00300 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 2.96e-14
Identity = 37/43 (86.05%), Postives = 38/43 (88.37%), Query Frame = 0


Query: 1  MPNRGPPTSLAIVTVVFGKSEINSSVALKLMGSNKNIENASAK 43
          MPNRGPPTSL IVTVV GKSEINSSVA KL G+NKNIENA AK
Sbjct: 1  MPNRGPPTSLTIVTVVSGKSEINSSVACKLKGNNKNIENAIAK 43

[Close]

BLAST of MELO.jh033446.1 vs. ExPASy TrEMBL
Match: A0A5A7UT35 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold73G00110 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 7.64e-14
Identity = 36/43 (83.72%), Postives = 38/43 (88.37%), Query Frame = 0


Query: 1  MPNRGPPTSLAIVTVVFGKSEINSSVALKLMGSNKNIENASAK 43
          MPNRGPPTSL IVT+V GKSEINSSVA KL G+NKNIENA AK
Sbjct: 1  MPNRGPPTSLTIVTIVSGKSEINSSVACKLKGNNKNIENAMAK 43

[Close]

BLAST of MELO.jh033446.1 vs. ExPASy TrEMBL
Match: A0A5A7UNB4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold73G00220 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.47e-13
Identity = 37/43 (86.05%), Postives = 38/43 (88.37%), Query Frame = 0


Query: 1  MPNRGPPTSLAIVTVVFGKSEINSSVALKLMGSNKNIENASAK 43
          MPNRGPPTSL IVTVV GKSEINSSVA KL G+NKNIENA AK
Sbjct: 1  MPNRGPPTSLTIVTVVSGKSEINSSVACKLKGNNKNIENAIAK 43

[Close]

BLAST of MELO.jh033446.1 vs. ExPASy TrEMBL
Match: A0A5A7SNN2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold480G00100 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 5.16e-13
Identity = 36/43 (83.72%), Postives = 38/43 (88.37%), Query Frame = 0


Query: 1  MPNRGPPTSLAIVTVVFGKSEINSSVALKLMGSNKNIENASAK 43
          MP+RGPPTSL IVTVV GKSEINSSVA KL G+NKNIENA AK
Sbjct: 1  MPSRGPPTSLTIVTVVSGKSEINSSVACKLKGNNKNIENAIAK 43

[Close]

BLAST of MELO.jh033446.1 vs. ExPASy TrEMBL
Match: A0A5A7TTA0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold157G00210 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 8.97e-13
Identity = 36/43 (83.72%), Postives = 37/43 (86.05%), Query Frame = 0


Query: 1  MPNRGPPTSLAIVTVVFGKSEINSSVALKLMGSNKNIENASAK 43
          MPNRGPPTSL IVTVV GKSEINS VA KL G+NKNIENA AK
Sbjct: 1  MPNRGPPTSLTIVTVVSGKSEINSFVACKLKGNNKNIENAIAK 43

The following BLAST results are available for this feature:

BLAST of MELO.jh033446.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0056202.1	6.11e-14	86.05	hypothetical protein E6C27_scaffold431G00300 [Cucumis melo var. makuwa]	[more]
KAA0056685.1	1.58e-13	83.72	hypothetical protein E6C27_scaffold73G00110 [Cucumis melo var. makuwa]	[more]
KAA0056694.1	3.03e-13	86.05	hypothetical protein E6C27_scaffold73G00220 [Cucumis melo var. makuwa]	[more]
KAA0031863.1	1.07e-12	83.72	hypothetical protein E6C27_scaffold480G00100 [Cucumis melo var. makuwa]	[more]
KAA0046098.1	1.85e-12	83.72	hypothetical protein E6C27_scaffold157G00210 [Cucumis melo var. makuwa]	[more]

BLAST of MELO.jh033446.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO.jh033446.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UK03	2.96e-14	86.05	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7UT35	7.64e-14	83.72	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7UNB4	1.47e-13	86.05	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7SNN2	5.16e-13	83.72	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7TTA0	8.97e-13	83.72	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of MELO.jh033446.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO.jh033446.1.t1	MELO.jh033446.1.t1	mRNA