MELO.jh033276.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh033276.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Locationchr04: 4310318 .. 4314358 (+)
RNA-Seq ExpressionMELO.jh033276.1
SyntenyMELO.jh033276.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAAAATGACGTAGCTCGCCCCATTAGCACCATCCTTGATGGCACAAACTATATTACCTGGGCCCACCAAATGAGGAGTTTTCTAATAGGTCGAAAATTATGGCGTATCGTCACGGGAGATATTACCAAACCTGTCAAACCTATTGTCCATGAAACCAGTGCAGAGGATATTCAGTACATTGAAAGACTTGAGGATTGGGACAGCAAAAATCACCAAATTATCACTTGGTTAGGTAATACTTCTATTCCAGCCATCCACACTCAGTTTGATGCCTTTGATAGTGCAAAAGAACTCTGGGATTTTCTATACACACGTTTTCAGTCTATAGGACTGGCTCATTATTATCAGCTGCACTCTACACTTGTTAGTCTCAATCAAGAAATGGGACAATCTGTGAATGAATATCTCGCCACTCTTCAGCCTATTTGGACTCAGTTGGATCAAGCAAAAATTAGCCCTGATCATATTCGTCTCATCAAAGTATTAATGGGTCTCCGACCAGAATATGAATCCGTTCGTGCTGCTCTGTTACATCGTAATCCTCTGCCATCTCTTGATGCTGCTGTTCAAGAAATCTTATTTGAGGAGAAAAGACTTGGCATTGTCTCCTCCCTGCACTCTGATGTCGCCCTTGCAACTACTCATCTCCGACAAGCTAATGAGACCATCTTCTGTAAGAATTGCAAACTTCATGGTCATAAGTTTGCTAACTGTCCTACTATTGAGTGCAGGTATTGTCACAAACGAGGTCATATTTTGGATAATTGTCCAACACGCCCACCCCGCCCTCCTGGTCATTCACACAAACCCAAATTTTCCCATAAAGCCGGTTCTTCATCTGTTGTTGCTGCTGCTACATCTGACATCACTGAACCTTCGAGTCTTCAGTTGACTGATCTTCATGATTTACTGAAACAGGTGATCTCTTCCCAATCTACTGCTCTTGCTGTCACCCCAGGTACCTCTTGGCTCCTTGACTCTGCCTGTTGTAATCACATGACTTCTGACATTTCCTTATTATCATCTCATATTCCTGTTCAATCACTTCCCCCGATCCACTCTGCTGATGGTAATTCCATGTCTATTTCCCACATTGGCACCGTTAATACACCCACCATCAAACTTTCCAACACCTATCATGTCCCAAATCTCACATTCAACCTAGCTTCTGTTGGTCAATTATGTGATCTCGGACTTACTATTATTTTTTCCTCTCATGGTTGTCAGGTTCAGGATTCTCAGACGGGACAAGTGATTGGTACGGGACGGAAGGTGGGTCGATTATTTGAGCTCACATCCCTACAACATTCTCCTGTGTTTCCAGCCATCTCTGCTCCCGTCACTGATAACACTCTATTTCAGTGGCATCTTCGTTTAGGTCATGCATCCTCTAATAAACTTCGTAGTTTAACTTCTACTGGTCTTTTAAACAATGTTTCTCAGTTTAATACTTTTGATTGTTTACATTGCAAAATGGCGAAACAACCTGCTTTGTCCTTTCCTAAATCTGCTTCTTTATGTGATAAACCTTTTGGCCTAATTCACTCTGATATTTGGGGACCTGCTCCATGTCCTACTGTTAATGGTTATCGATATTTTGTGTTATTTATTGATGATTATTCTCGATTCACTTGGATTTACTTTCTCAGAAATCGTTCCTCCTTATATCAAATATATGTTGATTTTGCAAATATGATTCAAACACAATTTTCTAGCAAAATCAAAATTCTTCGCACAGATAATGCAATGGAATATAAGGACTCTCGTTTTCTTTCCTTCCTTGCACAACAAGGCACTTTGATTCAACGCTCATGTCCTCACACTTCCCAGCAAAATGGACGAGCGGAACGCAAACACCGCCACATTTTAGACTCTGTTCGTGCCCAACTCCTTTCTGGATCCTGTCCTGAAAAATTTTGGGGAGAGGCTGCCCTCACCTCTGTTTATGTCATCAATCGCCTTCCATCTCAGGTCATACACAATATTTCCCCATTTGAACGACTATACGGTACTCCTCCAACTTACTCTCATCTCAAAGTCTTTGGGTGTGCATGCTTTGTGTTATTACATTCCCATGAACATACCAAACTGGAACCTCGTGCTCGTCTCTGTTGTTTCTTGGGTTATGGCACCGAACATAAAGGTTTTCGTTGTTGGGATCCTATCTCTCAACGATTACGTATTTCTCGCCATGTCACCTTTTGGGAACATCGTATGTTTTCTAGTCTTTCTTCATTTCATGCCTCTCTATCTAGTCCGCACTCATTCTTTACTGATCCTTCTACCCCTCTATTTCCCACTCCTGATTCATCATCCAACACTACATCTTGTCCCCCACTCACATCTGAGCTCACTGAATCGCACACTACCTCCGCACTCCCGGAACTCCCATCTGTCCCCTGTGAGGAACCTGAACATGCACCTGTCCGACGATCCACCCGGGTAAGAGAAACTCCTTCTCATCTCAAAGAGTACCATTGTTTTTCTACTATCATGTCTTTAGTTGAACCCTCCTCGTATAAGGAAGCCAGTACTAACCCTTTGTGGCAGCAAGCAATGGATACTGAACTTCAAGCCTTAGCCAAAACTCACACCTGGGATTATGTTGACCTACCTCCTGGTAAGAAACCTATTGGCTGTAAGTGGATTTTTAAAATAAAAACGCACTCTGATGGCTCTATTGAACGATACAAAGCACGTCTTGTTGCCAAAGGATATTCTCAGGAATATGGGATTGATTATGAAGAAACGTTTGCTCCAGTAGCTCGAATGACATCTGTCCGTAGTCTTCTAGCCATTGCAGCTGCAAAACAATGGCCCCTTCTTCAAATGGATGTTAAAAATGCGTTTCTAAATGGAACCCTATCTGAAGAAGTCTATATGAAACCACCACCTGGCACTACTCCACCACCACAGAAAGTATGCCTTCTTCGCCGTGCTCTCTACGGCCTCAAACAGGCTCCTCGAGCTTGGTTTGCAACCTTTAGTTCAACCATTACACAACTCGGGTTCACCTCCAGTTCTCATGATTCCGCCTTATTTACTCGTCAGACACCTAATGGTATTGTTCTCCTTCTCTTATATGTGGATGACATGATTATTACAGGTGATGACCCTCAAGCCATATCTGATTTGCAATGTTACCTGGGTAAGCATTTTGAGATGAAGGACTTAGGAAATCTCAACTATTTTCTTGGTCTTGAGATCTCCTCATCATCTAGTGGCTACTATTTATCTCAAGCAAAATATGCGTCTGACCTCCTCAATCGATCTGGTATTACTGATTCTGCCACTTTCTCAACACCTCTGGATCCGAATGTGCGTCTCACTCCTTTTGATGGTGTTCCCCTTGAAGATCCCACTTTGTATAGGCAACTAGTTGGCAGCCTAATTTACCTAACTGTGACTCGTCCAGATATTGCGTATGCAGTTCATATTGTTAGTCAGTTCATGGCTGCCCCTCGTACAATTCACTTCACTGCCGTCCTTCGCATTCTTCGCTACATCAAAGGTACTTTGGGTCATGGTCTACAGTTCTCCTCCCAATCCTCCCTGGTTCTCTCTGGTTTCTCTGATGCTGATTGGGCGGGTGATCCTACTGATAGACGGTCTACCACTGGCTATTGCTTCTATCTAGGTGACGCTCTTATCTCCTGGCGAAGTAAGAAACAATCTGTTGTTTCCCGTTCCAGCACAGAGTCTGAATATCGTGCACTGGCTGATGCTACGTCAGAATTAATTTGGCTGCGTTGGCTTCTTACTGATATGGGGGCCCCACAGACATCACCCACTATTCTTCATTGTGATAATCACAGTGCTATTCAGATTGCACACAATGATGTATTCCATGAACGAACAAAGCATATTGAGAATGACTGTCACTTTGTTCGCCACCACCTACAGAGCAACACACTTCATCTCCAACCCATCTCTACCACCGATCAACCTGCGGATATATTCACCAAAGCTCTCCATTCTCCTCGTTTCACTCAGTTAATTCACAAACTCAAGGTGGTCTCGACACTCCCATCTTGA

mRNA sequence

ATGGAGAAAAATGACGTAGCTCGCCCCATTAGCACCATCCTTGATGGCACAAACTATATTACCTGGGCCCACCAAATGAGGAGTTTTCTAATAGGTCGAAAATTATGGCGTATCGTCACGGGAGATATTACCAAACCTGTCAAACCTATTGTCCATGAAACCAGTGCAGAGGATATTCAGTACATTGAAAGACTTGAGGATTGGGACAGCAAAAATCACCAAATTATCACTTGGTTAGGTAATACTTCTATTCCAGCCATCCACACTCAGTTTGATGCCTTTGATAGTGCAAAAGAACTCTGGGATTTTCTATACACACGTTTTCAGTCTATAGGACTGGCTCATTATTATCAGCTGCACTCTACACTTGTTAGTCTCAATCAAGAAATGGGACAATCTGTGAATGAATATCTCGCCACTCTTCAGCCTATTTGGACTCAGTTGGATCAAGCAAAAATTAGCCCTGATCATATTCGTCTCATCAAAGTATTAATGGGTCTCCGACCAGAATATGAATCCGTTCGTGCTGCTCTGTTACATCGTAATCCTCTGCCATCTCTTGATGCTGCTGTTCAAGAAATCTTATTTGAGGAGAAAAGACTTGGCATTGTCTCCTCCCTGCACTCTGATGTCGCCCTTGCAACTACTCATCTCCGACAAGCTAATGAGACCATCTTCTGTAAGAATTGCAAACTTCATGGTCATAAGTTTGCTAACTGTCCTACTATTGAGTGCAGGTATTGTCACAAACGAGGTCATATTTTGGATAATTGTCCAACACGCCCACCCCGCCCTCCTGGTCATTCACACAAACCCAAATTTTCCCATAAAGCCGGTTCTTCATCTGTTGTTGCTGCTGCTACATCTGACATCACTGAACCTTCGAGTCTTCAGTTGACTGATCTTCATGATTTACTGAAACAGGTGATCTCTTCCCAATCTACTGCTCTTGCTGTCACCCCAGGTACCTCTTGGCTCCTTGACTCTGCCTGTTGTAATCACATGACTTCTGACATTTCCTTATTATCATCTCATATTCCTGTTCAATCACTTCCCCCGATCCACTCTGCTGATGGTAATTCCATGTCTATTTCCCACATTGGCACCGTTAATACACCCACCATCAAACTTTCCAACACCTATCATGTCCCAAATCTCACATTCAACCTAGCTTCTGTTGGTCAATTATGTGATCTCGGACTTACTATTATTTTTTCCTCTCATGGTTGTCAGGTTCAGGATTCTCAGACGGGACAAGTGATTGGTACGGGACGGAAGGTGGGTCGATTATTTGAGCTCACATCCCTACAACATTCTCCTGTGTTTCCAGCCATCTCTGCTCCCGTCACTGATAACACTCTATTTCAGTGGCATCTTCGTTTAGGTCATGCATCCTCTAATAAACTTCGTAGTTTAACTTCTACTGGTCTTTTAAACAATGTTTCTCAGTTTAATACTTTTGATTGTTTACATTGCAAAATGGCGAAACAACCTGCTTTGTCCTTTCCTAAATCTGCTTCTTTATGTGATAAACCTTTTGGCCTAATTCACTCTGATATTTGGGGACCTGCTCCATGTCCTACTGTTAATGGTTATCGATATTTTGTGTTATTTATTGATGATTATTCTCGATTCACTTGGATTTACTTTCTCAGAAATCGTTCCTCCTTATATCAAATATATGTTGATTTTGCAAATATGATTCAAACACAATTTTCTAGCAAAATCAAAATTCTTCGCACAGATAATGCAATGGAATATAAGGACTCTCGTTTTCTTTCCTTCCTTGCACAACAAGGCACTTTGATTCAACGCTCATGTCCTCACACTTCCCAGCAAAATGGACGAGCGGAACGCAAACACCGCCACATTTTAGACTCTGTTCGTGCCCAACTCCTTTCTGGATCCTGTCCTGAAAAATTTTGGGGAGAGGCTGCCCTCACCTCTGTTTATGTCATCAATCGCCTTCCATCTCAGGTCATACACAATATTTCCCCATTTGAACGACTATACGGTACTCCTCCAACTTACTCTCATCTCAAAGTCTTTGGGTGTGCATGCTTTGTGTTATTACATTCCCATGAACATACCAAACTGGAACCTCGTGCTCGTCTCTGTTGTTTCTTGGGTTATGGCACCGAACATAAAGGTTTTCGTTGTTGGGATCCTATCTCTCAACGATTACGTATTTCTCGCCATGTCACCTTTTGGGAACATCGTATGTTTTCTAGTCTTTCTTCATTTCATGCCTCTCTATCTAGTCCGCACTCATTCTTTACTGATCCTTCTACCCCTCTATTTCCCACTCCTGATTCATCATCCAACACTACATCTTGTCCCCCACTCACATCTGAGCTCACTGAATCGCACACTACCTCCGCACTCCCGGAACTCCCATCTGTCCCCTGTGAGGAACCTGAACATGCACCTGTCCGACGATCCACCCGGGTAAGAGAAACTCCTTCTCATCTCAAAGAGTACCATTGTTTTTCTACTATCATGTCTTTAGTTGAACCCTCCTCGTATAAGGAAGCCAGTACTAACCCTTTGTGGCAGCAAGCAATGGATACTGAACTTCAAGCCTTAGCCAAAACTCACACCTGGGATTATGTTGACCTACCTCCTGGTAAGAAACCTATTGGCTGTAAGTGGATTTTTAAAATAAAAACGCACTCTGATGGCTCTATTGAACGATACAAAGCACGTCTTGTTGCCAAAGGATATTCTCAGGAATATGGGATTGATTATGAAGAAACGTTTGCTCCAGTAGCTCGAATGACATCTGTCCGTAGTCTTCTAGCCATTGCAGCTGCAAAACAATGGCCCCTTCTTCAAATGGATGTTAAAAATGCGTTTCTAAATGGAACCCTATCTGAAGAAGTCTATATGAAACCACCACCTGGCACTACTCCACCACCACAGAAAGTATGCCTTCTTCGCCGTGCTCTCTACGGCCTCAAACAGGCTCCTCGAGCTTGGTTTGCAACCTTTAGTTCAACCATTACACAACTCGGGTTCACCTCCAGTTCTCATGATTCCGCCTTATTTACTCGTCAGACACCTAATGGTATTGTTCTCCTTCTCTTATATGTGGATGACATGATTATTACAGGTGATGACCCTCAAGCCATATCTGATTTGCAATGTTACCTGGGTAAGCATTTTGAGATGAAGGACTTAGGAAATCTCAACTATTTTCTTGGTCTTGAGATCTCCTCATCATCTAGTGGCTACTATTTATCTCAAGCAAAATATGCGTCTGACCTCCTCAATCGATCTGGTATTACTGATTCTGCCACTTTCTCAACACCTCTGGATCCGAATGTGCGTCTCACTCCTTTTGATGGTGTTCCCCTTGAAGATCCCACTTTGTATAGGCAACTAGTTGGCAGCCTAATTTACCTAACTGTGACTCGTCCAGATATTGCGTATGCAGTTCATATTGTTAGTCAGTTCATGGCTGCCCCTCGTACAATTCACTTCACTGCCGTCCTTCGCATTCTTCGCTACATCAAAGGTACTTTGGGTCATGGTCTACAGTTCTCCTCCCAATCCTCCCTGGTTCTCTCTGGTTTCTCTGATGCTGATTGGGCGGGTGATCCTACTGATAGACGGTCTACCACTGGCTATTGCTTCTATCTAGGTGACGCTCTTATCTCCTGGCGAAGTAAGAAACAATCTGTTGTTTCCCGTTCCAGCACAGAGTCTGAATATCGTGCACTGGCTGATGCTACGTCAGAATTAATTTGGCTGCGTTGGCTTCTTACTGATATGGGGGCCCCACAGACATCACCCACTATTCTTCATTGTGATAATCACAGTGCTATTCAGATTGCACACAATGATGTATTCCATGAACGAACAAAGCATATTGAGAATGACTGTCACTTTGTTCGCCACCACCTACAGAGCAACACACTTCATCTCCAACCCATCTCTACCACCGATCAACCTGCGGATATATTCACCAAAGCTCTCCATTCTCCTCGTTTCACTCAGTTAATTCACAAACTCAAGGTGGTCTCGACACTCCCATCTTGA

Coding sequence (CDS)

ATGGAGAAAAATGACGTAGCTCGCCCCATTAGCACCATCCTTGATGGCACAAACTATATTACCTGGGCCCACCAAATGAGGAGTTTTCTAATAGGTCGAAAATTATGGCGTATCGTCACGGGAGATATTACCAAACCTGTCAAACCTATTGTCCATGAAACCAGTGCAGAGGATATTCAGTACATTGAAAGACTTGAGGATTGGGACAGCAAAAATCACCAAATTATCACTTGGTTAGGTAATACTTCTATTCCAGCCATCCACACTCAGTTTGATGCCTTTGATAGTGCAAAAGAACTCTGGGATTTTCTATACACACGTTTTCAGTCTATAGGACTGGCTCATTATTATCAGCTGCACTCTACACTTGTTAGTCTCAATCAAGAAATGGGACAATCTGTGAATGAATATCTCGCCACTCTTCAGCCTATTTGGACTCAGTTGGATCAAGCAAAAATTAGCCCTGATCATATTCGTCTCATCAAAGTATTAATGGGTCTCCGACCAGAATATGAATCCGTTCGTGCTGCTCTGTTACATCGTAATCCTCTGCCATCTCTTGATGCTGCTGTTCAAGAAATCTTATTTGAGGAGAAAAGACTTGGCATTGTCTCCTCCCTGCACTCTGATGTCGCCCTTGCAACTACTCATCTCCGACAAGCTAATGAGACCATCTTCTGTAAGAATTGCAAACTTCATGGTCATAAGTTTGCTAACTGTCCTACTATTGAGTGCAGGTATTGTCACAAACGAGGTCATATTTTGGATAATTGTCCAACACGCCCACCCCGCCCTCCTGGTCATTCACACAAACCCAAATTTTCCCATAAAGCCGGTTCTTCATCTGTTGTTGCTGCTGCTACATCTGACATCACTGAACCTTCGAGTCTTCAGTTGACTGATCTTCATGATTTACTGAAACAGGTGATCTCTTCCCAATCTACTGCTCTTGCTGTCACCCCAGGTACCTCTTGGCTCCTTGACTCTGCCTGTTGTAATCACATGACTTCTGACATTTCCTTATTATCATCTCATATTCCTGTTCAATCACTTCCCCCGATCCACTCTGCTGATGGTAATTCCATGTCTATTTCCCACATTGGCACCGTTAATACACCCACCATCAAACTTTCCAACACCTATCATGTCCCAAATCTCACATTCAACCTAGCTTCTGTTGGTCAATTATGTGATCTCGGACTTACTATTATTTTTTCCTCTCATGGTTGTCAGGTTCAGGATTCTCAGACGGGACAAGTGATTGGTACGGGACGGAAGGTGGGTCGATTATTTGAGCTCACATCCCTACAACATTCTCCTGTGTTTCCAGCCATCTCTGCTCCCGTCACTGATAACACTCTATTTCAGTGGCATCTTCGTTTAGGTCATGCATCCTCTAATAAACTTCGTAGTTTAACTTCTACTGGTCTTTTAAACAATGTTTCTCAGTTTAATACTTTTGATTGTTTACATTGCAAAATGGCGAAACAACCTGCTTTGTCCTTTCCTAAATCTGCTTCTTTATGTGATAAACCTTTTGGCCTAATTCACTCTGATATTTGGGGACCTGCTCCATGTCCTACTGTTAATGGTTATCGATATTTTGTGTTATTTATTGATGATTATTCTCGATTCACTTGGATTTACTTTCTCAGAAATCGTTCCTCCTTATATCAAATATATGTTGATTTTGCAAATATGATTCAAACACAATTTTCTAGCAAAATCAAAATTCTTCGCACAGATAATGCAATGGAATATAAGGACTCTCGTTTTCTTTCCTTCCTTGCACAACAAGGCACTTTGATTCAACGCTCATGTCCTCACACTTCCCAGCAAAATGGACGAGCGGAACGCAAACACCGCCACATTTTAGACTCTGTTCGTGCCCAACTCCTTTCTGGATCCTGTCCTGAAAAATTTTGGGGAGAGGCTGCCCTCACCTCTGTTTATGTCATCAATCGCCTTCCATCTCAGGTCATACACAATATTTCCCCATTTGAACGACTATACGGTACTCCTCCAACTTACTCTCATCTCAAAGTCTTTGGGTGTGCATGCTTTGTGTTATTACATTCCCATGAACATACCAAACTGGAACCTCGTGCTCGTCTCTGTTGTTTCTTGGGTTATGGCACCGAACATAAAGGTTTTCGTTGTTGGGATCCTATCTCTCAACGATTACGTATTTCTCGCCATGTCACCTTTTGGGAACATCGTATGTTTTCTAGTCTTTCTTCATTTCATGCCTCTCTATCTAGTCCGCACTCATTCTTTACTGATCCTTCTACCCCTCTATTTCCCACTCCTGATTCATCATCCAACACTACATCTTGTCCCCCACTCACATCTGAGCTCACTGAATCGCACACTACCTCCGCACTCCCGGAACTCCCATCTGTCCCCTGTGAGGAACCTGAACATGCACCTGTCCGACGATCCACCCGGGTAAGAGAAACTCCTTCTCATCTCAAAGAGTACCATTGTTTTTCTACTATCATGTCTTTAGTTGAACCCTCCTCGTATAAGGAAGCCAGTACTAACCCTTTGTGGCAGCAAGCAATGGATACTGAACTTCAAGCCTTAGCCAAAACTCACACCTGGGATTATGTTGACCTACCTCCTGGTAAGAAACCTATTGGCTGTAAGTGGATTTTTAAAATAAAAACGCACTCTGATGGCTCTATTGAACGATACAAAGCACGTCTTGTTGCCAAAGGATATTCTCAGGAATATGGGATTGATTATGAAGAAACGTTTGCTCCAGTAGCTCGAATGACATCTGTCCGTAGTCTTCTAGCCATTGCAGCTGCAAAACAATGGCCCCTTCTTCAAATGGATGTTAAAAATGCGTTTCTAAATGGAACCCTATCTGAAGAAGTCTATATGAAACCACCACCTGGCACTACTCCACCACCACAGAAAGTATGCCTTCTTCGCCGTGCTCTCTACGGCCTCAAACAGGCTCCTCGAGCTTGGTTTGCAACCTTTAGTTCAACCATTACACAACTCGGGTTCACCTCCAGTTCTCATGATTCCGCCTTATTTACTCGTCAGACACCTAATGGTATTGTTCTCCTTCTCTTATATGTGGATGACATGATTATTACAGGTGATGACCCTCAAGCCATATCTGATTTGCAATGTTACCTGGGTAAGCATTTTGAGATGAAGGACTTAGGAAATCTCAACTATTTTCTTGGTCTTGAGATCTCCTCATCATCTAGTGGCTACTATTTATCTCAAGCAAAATATGCGTCTGACCTCCTCAATCGATCTGGTATTACTGATTCTGCCACTTTCTCAACACCTCTGGATCCGAATGTGCGTCTCACTCCTTTTGATGGTGTTCCCCTTGAAGATCCCACTTTGTATAGGCAACTAGTTGGCAGCCTAATTTACCTAACTGTGACTCGTCCAGATATTGCGTATGCAGTTCATATTGTTAGTCAGTTCATGGCTGCCCCTCGTACAATTCACTTCACTGCCGTCCTTCGCATTCTTCGCTACATCAAAGGTACTTTGGGTCATGGTCTACAGTTCTCCTCCCAATCCTCCCTGGTTCTCTCTGGTTTCTCTGATGCTGATTGGGCGGGTGATCCTACTGATAGACGGTCTACCACTGGCTATTGCTTCTATCTAGGTGACGCTCTTATCTCCTGGCGAAGTAAGAAACAATCTGTTGTTTCCCGTTCCAGCACAGAGTCTGAATATCGTGCACTGGCTGATGCTACGTCAGAATTAATTTGGCTGCGTTGGCTTCTTACTGATATGGGGGCCCCACAGACATCACCCACTATTCTTCATTGTGATAATCACAGTGCTATTCAGATTGCACACAATGATGTATTCCATGAACGAACAAAGCATATTGAGAATGACTGTCACTTTGTTCGCCACCACCTACAGAGCAACACACTTCATCTCCAACCCATCTCTACCACCGATCAACCTGCGGATATATTCACCAAAGCTCTCCATTCTCCTCGTTTCACTCAGTTAATTCACAAACTCAAGGTGGTCTCGACACTCCCATCTTGA

Protein sequence

MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQYIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLHSTLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYESVRAALLHRNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANCPTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITEPSSLQLTDLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSSSNTTSCPPLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEPSSYKEASTNPLWQQAMDTELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQLIHKLKVVSTLPS
Homology
[Close]
BLAST of MELO.jh033276.1 vs. NCBI nr
Match: KAA0043149.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK22647.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 2726 bits (7065), Expect = 0.0
Identity = 1344/1346 (99.85%), Postives = 1344/1346 (99.85%), Query Frame = 0 

Query: 1    MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ 60
            MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ
Sbjct: 1    MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ 60

Query: 61   YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH 120
            YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH
Sbjct: 61   YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH 120

Query: 121  STLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYESVRAALLH 180
            STLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYESVRAALLH
Sbjct: 121  STLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYESVRAALLH 180

Query: 181  RNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240
            RNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC
Sbjct: 181  RNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240

Query: 241  PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITEPSSLQLT 300
            PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITEPSSLQLT
Sbjct: 241  PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITEPSSLQLT 300

Query: 301  DLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSADGN 360
            DLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSADGN
Sbjct: 301  DLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSADGN 360

Query: 361  SMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQV 420
            SMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQV
Sbjct: 361  SMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQV 420

Query: 421  IGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNN 480
            IGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNN
Sbjct: 421  IGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNN 480

Query: 481  VSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFID 540
            VSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFID
Sbjct: 481  VSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFID 540

Query: 541  DYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQG 600
            DYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQG
Sbjct: 541  DYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQG 600

Query: 601  TLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQV 660
            TLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQV
Sbjct: 601  TLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQV 660

Query: 661  IHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRC 720
            IHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRC
Sbjct: 661  IHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRC 720

Query: 721  WDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSSSNTTSCP 780
            WDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDS SNTTSCP
Sbjct: 721  WDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP 780

Query: 781  PLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEPS 840
            PLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEPS
Sbjct: 781  PLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEPS 840

Query: 841  SYKEASTNPLWQQAMDTELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYK 900
            SYKEASTNPLWQQAMD ELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYK
Sbjct: 841  SYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYK 900

Query: 901  ARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEE 960
            ARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEE
Sbjct: 901  ARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEE 960

Query: 961  VYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQT 1020
            VYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQT
Sbjct: 961  VYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQT 1020

Query: 1021 PNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYL 1080
            PNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYL
Sbjct: 1021 PNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYL 1080

Query: 1081 SQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP 1140
            SQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP
Sbjct: 1081 SQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP 1140

Query: 1141 DIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGD 1200
            DIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGD
Sbjct: 1141 DIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGD 1200

Query: 1201 PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGA 1260
            PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGA
Sbjct: 1201 PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGA 1260

Query: 1261 PQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPAD 1320
            PQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPAD
Sbjct: 1261 PQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPAD 1320

Query: 1321 IFTKALHSPRFTQLIHKLKVVSTLPS 1346
            IFTKALHSPRFTQLIHKLKVVSTLPS
Sbjct: 1321 IFTKALHSPRFTQLIHKLKVVSTLPS 1346

[Close]
BLAST of MELO.jh033276.1 vs. NCBI nr
Match: KAA0036574.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 2724 bits (7060), Expect = 0.0
Identity = 1343/1346 (99.78%), Postives = 1343/1346 (99.78%), Query Frame = 0 

Query: 1    MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ 60
            MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ
Sbjct: 1    MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ 60

Query: 61   YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH 120
            YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH
Sbjct: 61   YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH 120

Query: 121  STLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYESVRAALLH 180
            STLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYE VRAALLH
Sbjct: 121  STLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYEPVRAALLH 180

Query: 181  RNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240
            RNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC
Sbjct: 181  RNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240

Query: 241  PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITEPSSLQLT 300
            PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITEPSSLQLT
Sbjct: 241  PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITEPSSLQLT 300

Query: 301  DLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSADGN 360
            DLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSADGN
Sbjct: 301  DLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSADGN 360

Query: 361  SMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQV 420
            SMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQV
Sbjct: 361  SMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQV 420

Query: 421  IGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNN 480
            IGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNN
Sbjct: 421  IGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNN 480

Query: 481  VSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFID 540
            VSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFID
Sbjct: 481  VSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFID 540

Query: 541  DYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQG 600
            DYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQG
Sbjct: 541  DYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQG 600

Query: 601  TLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQV 660
            TLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQV
Sbjct: 601  TLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQV 660

Query: 661  IHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRC 720
            IHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRC
Sbjct: 661  IHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRC 720

Query: 721  WDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSSSNTTSCP 780
            WDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDS SNTTSCP
Sbjct: 721  WDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP 780

Query: 781  PLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEPS 840
            PLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEPS
Sbjct: 781  PLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEPS 840

Query: 841  SYKEASTNPLWQQAMDTELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYK 900
            SYKEASTNPLWQQAMD ELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYK
Sbjct: 841  SYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYK 900

Query: 901  ARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEE 960
            ARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEE
Sbjct: 901  ARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEE 960

Query: 961  VYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQT 1020
            VYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQT
Sbjct: 961  VYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQT 1020

Query: 1021 PNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYL 1080
            PNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYL
Sbjct: 1021 PNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYL 1080

Query: 1081 SQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP 1140
            SQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP
Sbjct: 1081 SQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP 1140

Query: 1141 DIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGD 1200
            DIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGD
Sbjct: 1141 DIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGD 1200

Query: 1201 PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGA 1260
            PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGA
Sbjct: 1201 PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGA 1260

Query: 1261 PQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPAD 1320
            PQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPAD
Sbjct: 1261 PQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPAD 1320

Query: 1321 IFTKALHSPRFTQLIHKLKVVSTLPS 1346
            IFTKALHSPRFTQLIHKLKVVSTLPS
Sbjct: 1321 IFTKALHSPRFTQLIHKLKVVSTLPS 1346

[Close]
BLAST of MELO.jh033276.1 vs. NCBI nr
Match: KAA0065380.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 2643 bits (6852), Expect = 0.0
Identity = 1312/1346 (97.47%), Postives = 1312/1346 (97.47%), Query Frame = 0 

Query: 1    MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ 60
            MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ
Sbjct: 1    MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ 60

Query: 61   YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH 120
            YIERLEDWDSKNHQIITWLG                                LAHYYQLH
Sbjct: 61   YIERLEDWDSKNHQIITWLG--------------------------------LAHYYQLH 120

Query: 121  STLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYESVRAALLH 180
            STLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYESVRAALLH
Sbjct: 121  STLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYESVRAALLH 180

Query: 181  RNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240
            RNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC
Sbjct: 181  RNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240

Query: 241  PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITEPSSLQLT 300
            PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITEPSSLQLT
Sbjct: 241  PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITEPSSLQLT 300

Query: 301  DLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSADGN 360
            DLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSADGN
Sbjct: 301  DLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSADGN 360

Query: 361  SMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQV 420
            SMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQV
Sbjct: 361  SMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQV 420

Query: 421  IGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNN 480
            IGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNN
Sbjct: 421  IGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNN 480

Query: 481  VSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFID 540
            VSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFID
Sbjct: 481  VSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFID 540

Query: 541  DYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQG 600
            DYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQG
Sbjct: 541  DYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQG 600

Query: 601  TLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQV 660
            TLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQV
Sbjct: 601  TLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQV 660

Query: 661  IHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRC 720
            IHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRC
Sbjct: 661  IHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRC 720

Query: 721  WDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSSSNTTSCP 780
            WDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDS SNTTSCP
Sbjct: 721  WDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP 780

Query: 781  PLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEPS 840
            PLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEPS
Sbjct: 781  PLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEPS 840

Query: 841  SYKEASTNPLWQQAMDTELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYK 900
            SYKEASTNPLWQQAMD ELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYK
Sbjct: 841  SYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYK 900

Query: 901  ARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEE 960
            ARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEE
Sbjct: 901  ARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEE 960

Query: 961  VYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQT 1020
            VYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQT
Sbjct: 961  VYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQT 1020

Query: 1021 PNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYL 1080
            PNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYL
Sbjct: 1021 PNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYL 1080

Query: 1081 SQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP 1140
            SQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP
Sbjct: 1081 SQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP 1140

Query: 1141 DIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGD 1200
            DIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGD
Sbjct: 1141 DIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGD 1200

Query: 1201 PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGA 1260
            PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGA
Sbjct: 1201 PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGA 1260

Query: 1261 PQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPAD 1320
            PQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPAD
Sbjct: 1261 PQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPAD 1314

Query: 1321 IFTKALHSPRFTQLIHKLKVVSTLPS 1346
            IFTKALHSPRFTQLIHKLKVVSTLPS
Sbjct: 1321 IFTKALHSPRFTQLIHKLKVVSTLPS 1314

[Close]
BLAST of MELO.jh033276.1 vs. NCBI nr
Match: KAA0058316.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 2494 bits (6463), Expect = 0.0
Identity = 1247/1346 (92.64%), Postives = 1253/1346 (93.09%), Query Frame = 0 

Query: 1    MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ 60
            MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAE+IQ
Sbjct: 1    MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAENIQ 60

Query: 61   YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH 120
            YIE+LEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAK+LWDFLYTRFQSIGLAHYYQLH
Sbjct: 61   YIEKLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKKLWDFLYTRFQSIGLAHYYQLH 120

Query: 121  STLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYESVRAALLH 180
            STLVSLNQE+GQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYE VRAALLH
Sbjct: 121  STLVSLNQEVGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYEFVRAALLH 180

Query: 181  RNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240
            RN LPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC
Sbjct: 181  RNSLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240

Query: 241  PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITEPSSLQLT 300
            PTIEC+YCHKRGHILDNCPTRPPRPPGHSHKPKF HKAGSSSVVAAATSDITEPSSLQLT
Sbjct: 241  PTIECKYCHKRGHILDNCPTRPPRPPGHSHKPKFFHKAGSSSVVAAATSDITEPSSLQLT 300

Query: 301  DLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSADGN 360
            DLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSH PVQSLPPIHSADGN
Sbjct: 301  DLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHTPVQSLPPIHSADGN 360

Query: 361  SMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQV 420
            SMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQV
Sbjct: 361  SMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQV 420

Query: 421  IGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNN 480
            IGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNN
Sbjct: 421  IGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNN 480

Query: 481  VSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFID 540
            VSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVN          
Sbjct: 481  VSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVN---------- 540

Query: 541  DYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQG 600
                                                     DNAMEYKDSRFLSFLAQQG
Sbjct: 541  -----------------------------------------DNAMEYKDSRFLSFLAQQG 600

Query: 601  TLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQV 660
            TLIQRSCPHTSQQNGRAERKHRHILDSV                                
Sbjct: 601  TLIQRSCPHTSQQNGRAERKHRHILDSV-------------------------------- 660

Query: 661  IHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRC 720
            IHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRC
Sbjct: 661  IHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRC 720

Query: 721  WDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSSSNTTSCP 780
            WDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDS SNTTSCP
Sbjct: 721  WDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP 780

Query: 781  PLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEPS 840
            PLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEPS
Sbjct: 781  PLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEPS 840

Query: 841  SYKEASTNPLWQQAMDTELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYK 900
            SYKEASTNPLWQQAMD ELQAL KTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYK
Sbjct: 841  SYKEASTNPLWQQAMDNELQALDKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYK 900

Query: 901  ARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEE 960
            ARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEE
Sbjct: 901  ARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEE 960

Query: 961  VYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQT 1020
            VYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQT
Sbjct: 961  VYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQT 1020

Query: 1021 PNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYL 1080
            PNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYF+GLEISSSSSGYYL
Sbjct: 1021 PNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFIGLEISSSSSGYYL 1080

Query: 1081 SQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP 1140
            SQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP
Sbjct: 1081 SQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP 1140

Query: 1141 DIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGD 1200
            DIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGD
Sbjct: 1141 DIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGD 1200

Query: 1201 PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGA 1260
            PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDM A
Sbjct: 1201 PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMRA 1260

Query: 1261 PQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPAD 1320
            PQTSP ILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPAD
Sbjct: 1261 PQTSPIILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPAD 1263

Query: 1321 IFTKALHSPRFTQLIHKLKVVSTLPS 1346
            IFTKALHSPRFTQLIHKLKV STLPS
Sbjct: 1321 IFTKALHSPRFTQLIHKLKVFSTLPS 1263

[Close]
BLAST of MELO.jh033276.1 vs. NCBI nr
Match: KAA0036615.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 2175 bits (5636), Expect = 0.0
Identity = 1112/1303 (85.34%), Postives = 1125/1303 (86.34%), Query Frame = 0 

Query: 1    MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ 60
            MEKNDVARPISTILD TNYITWAHQMRSFLIGRKLWRIVTGDIT+PVKPIVHETSAEDIQ
Sbjct: 1    MEKNDVARPISTILDDTNYITWAHQMRSFLIGRKLWRIVTGDITEPVKPIVHETSAEDIQ 60

Query: 61   YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH 120
            YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH
Sbjct: 61   YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH 120

Query: 121  STLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYESVRAALLH 180
            STLVSLNQE+GQSVN+YLATLQPIWTQLDQAKISPDHIRLIKVL+GLRP+YESVRAALLH
Sbjct: 121  STLVSLNQEVGQSVNKYLATLQPIWTQLDQAKISPDHIRLIKVLVGLRPKYESVRAALLH 180

Query: 181  RNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240
            RNPLPSLDAAV+EILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC
Sbjct: 181  RNPLPSLDAAVEEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240

Query: 241  PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATS-DITEPSSLQL 300
            PTIE RYCHKRGHILDNCPTRP RPPGHSHKPKFSHKAGSSSVVAAATS DITEPSS   
Sbjct: 241  PTIEYRYCHKRGHILDNCPTRPSRPPGHSHKPKFSHKAGSSSVVAAATSSDITEPSS--- 300

Query: 301  TDLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSADG 360
                                   TSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSAD 
Sbjct: 301  -----------------------TSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSADC 360

Query: 361  NSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQ 420
            NSMSISHIGTV                                          QDSQTGQ
Sbjct: 361  NSMSISHIGTV------------------------------------------QDSQTGQ 420

Query: 421  VIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLN 480
            VIGT RK                              WHLRLGHASSNKLRSLTSTGLLN
Sbjct: 421  VIGTRRK------------------------------WHLRLGHASSNKLRSLTSTGLLN 480

Query: 481  NVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFI 540
            NVSQFNTFDCLHCKMAKQPALSFPKSASLC+KPFGLIHSDIWGPAPCPTVN         
Sbjct: 481  NVSQFNTFDCLHCKMAKQPALSFPKSASLCNKPFGLIHSDIWGPAPCPTVN--------- 540

Query: 541  DDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQ 600
                                                      DNAMEYKDSRFLSFLAQQ
Sbjct: 541  ------------------------------------------DNAMEYKDSRFLSFLAQQ 600

Query: 601  GTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQ 660
            GTLIQRSCPHTSQQNGRAERKHRHILDS+RAQLL GSC EKFWGEA LTSVYVINRLPSQ
Sbjct: 601  GTLIQRSCPHTSQQNGRAERKHRHILDSIRAQLLFGSCSEKFWGEAVLTSVYVINRLPSQ 660

Query: 661  VIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFR 720
            VIHNISPFERLYGTPP+YSHLKVFGCA FVLLH HEHTKLEPRA LCCFLGYGT+HKGFR
Sbjct: 661  VIHNISPFERLYGTPPSYSHLKVFGCAYFVLLHPHEHTKLEPRACLCCFLGYGTKHKGFR 720

Query: 721  CWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSSSNTTSC 780
            CWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSP+SFFTDPSTPLFPTPDS SNTTSC
Sbjct: 721  CWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPNSFFTDPSTPLFPTPDSPSNTTSC 780

Query: 781  PPLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEP 840
            PPLTSELTESHTTSALP+LPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIM LVEP
Sbjct: 781  PPLTSELTESHTTSALPDLPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMPLVEP 840

Query: 841  SSYKEASTNPLWQQAMDTELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERY 900
            SSYKEASTNPL QQAMD ELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTH DGSIERY
Sbjct: 841  SSYKEASTNPLRQQAMDDELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHFDGSIERY 900

Query: 901  KARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSE 960
            KA L+AKGYSQEYGIDYEETFAPVARMTSVRSLLAI AAKQWPLLQMDVKNAFLNG LSE
Sbjct: 901  KACLIAKGYSQEYGIDYEETFAPVARMTSVRSLLAITAAKQWPLLQMDVKNAFLNGILSE 960

Query: 961  EVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQ 1020
            EVYMKPP  TTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQ
Sbjct: 961  EVYMKPPLDTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQ 1020

Query: 1021 TPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYY 1080
            TPNGIVLLLLYVDDMIIT DD QAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYY
Sbjct: 1021 TPNGIVLLLLYVDDMIITSDDRQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYY 1080

Query: 1081 LSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTR 1140
            LSQAKY SDLLNRSGITDSATFS PLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTR
Sbjct: 1081 LSQAKYTSDLLNRSGITDSATFSIPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTR 1140

Query: 1141 PDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAG 1200
            PDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAG
Sbjct: 1141 PDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAG 1154

Query: 1201 DPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMG 1260
            DPTDRRSTT YCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMG
Sbjct: 1201 DPTDRRSTTSYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMG 1154

Query: 1261 APQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHL 1302
            APQTSPTILHCDNHSAIQ AHNDVFHERTKHIENDCHFV HHL
Sbjct: 1261 APQTSPTILHCDNHSAIQSAHNDVFHERTKHIENDCHFVCHHL 1154

[Close]
BLAST of MELO.jh033276.1 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 716.8 bits (1849), Expect = 4.4e-205
Identity = 491/1468 (33.45%), Postives = 727/1468 (49.52%), Query Frame = 0 

Query: 12   TILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQYIERLEDWDSK 71
            T L  TNY+ W+ Q+ +   G +L   + G  T P   I  + +        R +  D  
Sbjct: 24   TKLTSTNYLMWSRQVHALFDGYELAGFLDGSTTMPPATIGTDAAPRVNPDYTRWKRQDKL 83

Query: 72   NHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLHSTLVSLNQEMG 131
             +  +  LG  S+ ++        +A ++W+ L   + +    H  QL + L    +   
Sbjct: 84   IYSAV--LGAISM-SVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKGT- 143

Query: 132  QSVNEYLATLQPIWTQLDQAKISPDHIRLI-KVLMGLRPEYESVRAALLHRNPLPSLDAA 191
            +++++Y+  L   + QL       DH   + +VL  L  EY+ V   +  ++  P+L   
Sbjct: 144  KTIDDYMQGLVTRFDQLALLGKPMDHDEQVERVLENLPEEYKPVIDQIAAKDTPPTLTEI 203

Query: 192  VQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANCPTIECRYCHK 251
             + +L  E ++  VSS  + + +    +   N T    N         N      RY   
Sbjct: 204  HERLLNHESKILAVSSA-TVIPITANAVSHRNTTTTNNN---------NNGNRNNRY-DN 263

Query: 252  RGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITEPSSLQLTDLHDLLKQVI 311
            R +  ++ P +      H +  +     G   +           S LQ    H L    +
Sbjct: 264  RNNNNNSKPWQQSSTNFHPNNNQSKPYLGKCQICGVQGHSAKRCSQLQ----HFL--SSV 323

Query: 312  SSQSTALAVTP--------------GTSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHS 371
            +SQ      TP                +WLLDS   +H+TSD + LS H P      +  
Sbjct: 324  NSQQPPSPFTPWQPRANLALGSPYSSNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMV 383

Query: 372  ADGNSMSISHIGTVNTPT----IKLSNTYHVPNLTFNLASVGQLCDL-GLTIIFSSHGCQ 431
            ADG+++ ISH G+ +  T    + L N  +VPN+  NL SV +LC+  G+++ F     Q
Sbjct: 384  ADGSTIPISHTGSTSLSTKSRPLNLHNILYVPNIHKNLISVYRLCNANGVSVEFFPASFQ 443

Query: 432  VQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRS 491
            V+D  TG  +  G+    L+E       PV    ++P +  T   WH RLGH + + L S
Sbjct: 444  VKDLNTGVPLLQGKTKDELYEWPIASSQPV-SLFASPSSKATHSSWHARLGHPAPSILNS 503

Query: 492  LTSTGLLNNVSQFNTF-DCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVN 551
            + S   L+ ++  + F  C  C + K   + F +S     +P   I+SD+W  +P  + +
Sbjct: 504  VISNYSLSVLNPSHKFLSCSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWS-SPILSHD 563

Query: 552  GYRYFVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDS 611
             YRY+V+F+D ++R+TW+Y L+ +S + + ++ F N+++ +F ++I    +DN  E+   
Sbjct: 564  NYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEF--V 623

Query: 612  RFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSV 671
                + +Q G     S PHT + NG +ERKHRHI+++    L   S P+ +W  A   +V
Sbjct: 624  ALWEYFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVAV 683

Query: 672  YVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLG 731
            Y+INRLP+ ++   SPF++L+GT P Y  L+VFGCAC+  L  +   KL+ ++R C FLG
Sbjct: 684  YLINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQCVFLG 743

Query: 732  YGTEHKGFRCWDPISQRLRISRHVTFWEH------------------RMFSSLSSFHASL 791
            Y      + C    + RL ISRHV F E+                  R  S + S H +L
Sbjct: 744  YSLTQSAYLCLHLQTSRLYISRHVRFDENCFPFSNYLATLSPVQEQRRESSCVWSPHTTL 803

Query: 792  ------------SSPHSFFTDPSTPLFP---------------------TPD-------- 851
                        S PH   T PS+P  P                     +P+        
Sbjct: 804  PTRTPVLPAPSCSDPHHAATPPSSPSAPFRNSQVSSSNLDSSFSSSFPSSPEPTAPRQNG 863

Query: 852  ---------------SSSNTT----------------SCPPLTSELTESHTTSA-----L 911
                           SS NT+                S P  +S  + S TTSA      
Sbjct: 864  PQPTTQPTQTQTQTHSSQNTSQNNPTNESPSQLAQSLSTPAQSSSSSPSPTTSASSSSTS 923

Query: 912  PELPSVPCEEP----------EHAPVR-RSTRVRETPSHLKEYHCFSTIMSLV---EPSS 971
            P  PS+    P            AP+   S   R     +K    +S  +SL    EP +
Sbjct: 924  PTPPSILIHPPPPLAQIVNNNNQAPLNTHSMGTRAKAGIIKPNPKYSLAVSLAAESEPRT 983

Query: 972  YKEASTNPLWQQAMDTELQALAKTHTWDYVDLPPGKKPI-GCKWIFKIKTHSDGSIERYK 1031
              +A  +  W+ AM +E+ A    HTWD V  PP    I GC+WIF  K +SDGS+ RYK
Sbjct: 984  AIQALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYK 1043

Query: 1032 ARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEE 1091
            ARLVAKGY+Q  G+DY ETF+PV + TS+R +L +A  + WP+ Q+DV NAFL GTL+++
Sbjct: 1044 ARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDD 1103

Query: 1092 VYMKPPPG--TTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTR 1151
            VYM  PPG      P  VC LR+ALYGLKQAPRAW+    + +  +GF +S  D++LF  
Sbjct: 1104 VYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVL 1163

Query: 1152 QTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGY 1211
            Q    IV +L+YVDD++ITG+DP  + +    L + F +KD   L+YFLG+E     +G 
Sbjct: 1164 QRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKRVPTGL 1223

Query: 1212 YLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVT 1271
            +LSQ +Y  DLL R+ +  +   +TP+ P+ +L+ + G  L DPT YR +VGSL YL  T
Sbjct: 1224 HLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQYLAFT 1283

Query: 1272 RPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWA 1331
            RPDI+YAV+ +SQFM  P   H  A+ RILRY+ GT  HG+     ++L L  +SDADWA
Sbjct: 1284 RPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWA 1343

Query: 1332 GDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDM 1347
            GD  D  ST GY  YLG   ISW SKKQ  V RSSTE+EYR++A+ +SE+ W+  LLT++
Sbjct: 1344 GDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTEL 1403

[Close]
BLAST of MELO.jh033276.1 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 683.3 bits (1762), Expect = 5.4e-195
Identity = 473/1479 (31.98%), Postives = 712/1479 (48.14%), Query Frame = 0 

Query: 12   TILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQYIERLED---- 71
            T L  TNY+ W+ Q+ +   G +L   + G  + P+ P    T A     + R+      
Sbjct: 24   TKLTSTNYLMWSRQVHALFDGYELAGFLDG--STPMPPATIGTDA-----VPRVNPDYTR 83

Query: 72   WDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLHSTLVSLN 131
            W  ++  I + +      ++        +A ++W+ L   + +    H  QL        
Sbjct: 84   WRRQDKLIYSAILGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLR------- 143

Query: 132  QEMGQSVNEYLATLQPIWTQLDQAKI---SPDHIRLI-KVLMGLRPEYESVRAALLHRNP 191
                              T+ DQ  +     DH   + +VL  L  +Y+ V   +  ++ 
Sbjct: 144  ----------------FITRFDQLALLGKPMDHDEQVERVLENLPDDYKPVIDQIAAKDT 203

Query: 192  LPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANCPTI 251
             PSL    + ++  E +L  ++S  ++V   T ++     T   +N    G         
Sbjct: 204  PPSLTEIHERLINRESKLLALNS--AEVVPITANVVTHRNTNTNRNQNNRG--------- 263

Query: 252  ECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITEPSSLQLTDLH 311
                   R +  +N  +   +P   S   +  ++     +       +   S+ +   LH
Sbjct: 264  -----DNRNYNNNNNRSNSWQP--SSSGSRSDNRQPKPYLGRCQICSVQGHSAKRCPQLH 323

Query: 312  DLLKQVISSQSTA----------LAVTP---GTSWLLDSACCNHMTSDISLLSSHIPVQS 371
                     QST+          LAV       +WLLDS   +H+TSD + LS H P   
Sbjct: 324  QFQSTTNQQQSTSPFTPWQPRANLAVNSPYNANNWLLDSGATHHITSDFNNLSFHQPYTG 383

Query: 372  LPPIHSADGNSMSISHIGTVNTPT----IKLSNTYHVPNLTFNLASVGQLCDLG-LTIIF 431
               +  ADG+++ I+H G+ + PT    + L+   +VPN+  NL SV +LC+   +++ F
Sbjct: 384  GDDVMIADGSTIPITHTGSASLPTSSRSLDLNKVLYVPNIHKNLISVYRLCNTNRVSVEF 443

Query: 432  SSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRLGHAS 491
                 QV+D  TG  +  G+    L+E   +  S      ++P +  T   WH RLGH S
Sbjct: 444  FPASFQVKDLNTGVPLLQGKTKDELYE-WPIASSQAVSMFASPCSKATHSSWHSRLGHPS 503

Query: 492  SNKLRSLTSTGLLNNVS-QFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPA 551
               L S+ S   L  ++       C  C + K   + F  S     KP   I+SD+W  +
Sbjct: 504  LAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVWS-S 563

Query: 552  PCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNA 611
            P  +++ YRY+V+F+D ++R+TW+Y L+ +S +   ++ F ++++ +F ++I  L +DN 
Sbjct: 564  PILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNG 623

Query: 612  MEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGE 671
             E+   R   +L+Q G     S PHT + NG +ERKHRHI++     L   S P+ +W  
Sbjct: 624  GEFVVLR--DYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASVPKTYWPY 683

Query: 672  AALTSVYVINRLPSQVIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRAR 731
            A   +VY+INRLP+ ++   SPF++L+G PP Y  LKVFGCAC+  L  +   KLE +++
Sbjct: 684  AFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKSK 743

Query: 732  LCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPH-------- 791
             C F+GY      + C    + RL  SRHV F E     S ++F  S S           
Sbjct: 744  QCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTNFGVSTSQEQRSDSAPNW 803

Query: 792  -SFFTDPSTPLF--------------PTPDSS---------------SNTTSCPPLTSEL 851
             S  T P+TPL               P P SS               S++ S P  +   
Sbjct: 804  PSHTTLPTTPLVLPAPPCLGPHLDTSPRPPSSPSPLCTTQVSSSNLPSSSISSPSSSEPT 863

Query: 852  TESHT------------------------------------TSALPE---------LPSV 911
              SH                                      S LP+          PS 
Sbjct: 864  APSHNGPQPTAQPHQTQNSNSNSPILNNPNPNSPSPNSPNQNSPLPQSPISSPHIPTPST 923

Query: 912  PCEEPEHAPVRRSTRVRETPSHL-------------------------------KEYHCF 971
               EP ++P   ST     P  L                               ++Y   
Sbjct: 924  SISEP-NSPSSSSTSTPPLPPVLPAPPIIQVNAQAPVNTHSMATRAKDGIRKPNQKYSYA 983

Query: 972  STIMSLVEPSSYKEASTNPLWQQAMDTELQALAKTHTWDYVDLPPGKKPI-GCKWIFKIK 1031
            +++ +  EP +  +A  +  W+QAM +E+ A    HTWD V  PP    I GC+WIF  K
Sbjct: 984  TSLAANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKK 1043

Query: 1032 THSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVK 1091
             +SDGS+ RYKARLVAKGY+Q  G+DY ETF+PV + TS+R +L +A  + WP+ Q+DV 
Sbjct: 1044 FNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVN 1103

Query: 1092 NAFLNGTLSEEVYMKPPPGTTPP--PQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFT 1151
            NAFL GTL++EVYM  PPG      P  VC LR+A+YGLKQAPRAW+    + +  +GF 
Sbjct: 1104 NAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFV 1163

Query: 1152 SSSHDSALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFL 1211
            +S  D++LF  Q    I+ +L+YVDD++ITG+D   +      L + F +K+  +L+YFL
Sbjct: 1164 NSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFL 1223

Query: 1212 GLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQ 1271
            G+E      G +LSQ +Y  DLL R+ +  +   +TP+  + +LT   G  L DPT YR 
Sbjct: 1224 GIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTEYRG 1283

Query: 1272 LVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSL 1331
            +VGSL YL  TRPD++YAV+ +SQ+M  P   H+ A+ R+LRY+ GT  HG+     ++L
Sbjct: 1284 IVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTL 1343

Query: 1332 VLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSE 1347
             L  +SDADWAGD  D  ST GY  YLG   ISW SKKQ  V RSSTE+EYR++A+ +SE
Sbjct: 1344 SLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSE 1403

[Close]
BLAST of MELO.jh033276.1 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 594.3 bits (1531), Expect = 3.3e-168
Identity = 420/1353 (31.04%), Postives = 668/1353 (49.37%), Query Frame = 0 

Query: 19   YITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQYIERLEDWDSKNHQIITW 78
            + TW  +MR  LI + L +++  D  KP      +T         + EDW   + +  + 
Sbjct: 17   FSTWQRRMRDLLIQQGLHKVLDVDSKKP------DTM--------KAEDWADLDERAASA 76

Query: 79   LG-NTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLHSTLVSLNQEMGQSVNEY 138
            +  + S   ++   D  D+A+ +W  L + + S  L +   L   L +L+   G +   +
Sbjct: 77   IRLHLSDDVVNNIIDE-DTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLSH 136

Query: 139  LATLQPIWTQLDQAKIS-PDHIRLIKVLMGLRPEYESVRAALLHRNPLPSLDAAVQEILF 198
            L     + TQL    +   +  + I +L  L   Y+++   +LH      L      +L 
Sbjct: 137  LNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIELKDVTSALLL 196

Query: 199  EEKRLGIVSSLHSDVALAT----THLRQANETIFCKNCKLHGHKFANCPTIECRYCHKRG 258
             EK        +   AL T       ++++        +      +      C  C++ G
Sbjct: 197  NEKMR--KKPENQGQALITEGRGRSYQRSSNNYGRSGARGKSKNRSKSRVRNCYNCNQPG 256

Query: 259  HILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITEPSSLQLTDLHDLLKQVISS 318
            H   +CP  P +  G +   K                   + ++  +   +D +   I+ 
Sbjct: 257  HFKRDCP-NPRKGKGETSGQK------------------NDDNTAAMVQNNDNVVLFINE 316

Query: 319  QSTALAVT-PGTSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSADGNSMSISHIGTVN 378
            +   + ++ P + W++D+A  +H T    L   ++       +   + +   I+ IG + 
Sbjct: 317  EEECMHLSGPESEWVVDTAASHHATPVRDLFCRYV-AGDFGTVKMGNTSYSKIAGIGDIC 376

Query: 379  TP-----TIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRK 438
                   T+ L +  HVP+L  NL S   L   G    F++   ++  ++   VI  G  
Sbjct: 377  IKTNVGCTLVLKDVRHVPDLRMNLISGIALDRDGYESYFANQKWRL--TKGSLVIAKGVA 436

Query: 439  VGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNT 498
             G L+   +         ++A   + ++  WH R+GH S   L+ L    L++       
Sbjct: 437  RGTLYRTNA---EICQGELNAAQDEISVDLWHKRMGHMSEKGLQILAKKSLISYAKGTTV 496

Query: 499  FDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFT 558
              C +C   KQ  +SF  S+        L++SD+ GP    ++ G +YFV FIDD SR  
Sbjct: 497  KPCDYCLFGKQHRVSFQTSSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKL 556

Query: 559  WIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRS 618
            W+Y L+ +  ++Q++  F  +++ +   K+K LR+DN  EY    F  + +  G   +++
Sbjct: 557  WVYILKTKDQVFQVFQKFHALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKT 616

Query: 619  CPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQVIHNISP 678
             P T Q NG AER +R I++ VR+ L     P+ FWGEA  T+ Y+INR PS  +    P
Sbjct: 617  VPGTPQHNGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIP 676

Query: 679  FERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRCWDPISQ 738
                     +YSHLKVFGC  F  +   + TKL+ ++  C F+GYG E  G+R WDP+ +
Sbjct: 677  ERVWTNKEVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKK 736

Query: 739  RLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPT-PDSSSNTTSCPPLTSE 798
            ++  SR V F E  + ++     A +S       +   P F T P +S+N TS    T E
Sbjct: 737  KVIRSRDVVFRESEVRTA-----ADMSEK---VKNGIIPNFVTIPSTSNNPTSAESTTDE 796

Query: 799  LTE------------SHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTI 858
            ++E                  + E+      E +H P+RRS R R           +  I
Sbjct: 797  VSEQGEQPGEVIEQGEQLDEGVEEVEHPTQGEEQHQPLRRSERPRVESRRYPSTE-YVLI 856

Query: 859  MSLVEPSSYKEASTNPLWQQ---AMDTELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKT 918
                EP S KE  ++P   Q   AM  E+++L K  T+  V+LP GK+P+ CKW+FK+K 
Sbjct: 857  SDDREPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKK 916

Query: 919  HSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKN 978
              D  + RYKARLV KG+ Q+ GID++E F+PV +MTS+R++L++AA+    + Q+DVK 
Sbjct: 917  DGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKT 976

Query: 979  AFLNGTLSEEVYMKPPPGTTPPPQK--VCLLRRALYGLKQAPRAWFATFSSTITQLGFTS 1038
            AFL+G L EE+YM+ P G     +K  VC L ++LYGLKQAPR W+  F S +    +  
Sbjct: 977  AFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLK 1036

Query: 1039 SSHDSAL-FTRQTPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFL 1098
            +  D  + F R + N  ++LLLYVDDM+I G D   I+ L+  L K F+MKDLG     L
Sbjct: 1037 TYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQIL 1096

Query: 1099 GLEI--SSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDPNVRL------TPFDGVPL 1158
            G++I    +S   +LSQ KY   +L R  + ++   STPL  +++L      T  +    
Sbjct: 1097 GMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGN 1156

Query: 1159 EDPTLYRQLVGSLIYLTV-TRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHG 1218
                 Y   VGSL+Y  V TRPDIA+AV +VS+F+  P   H+ AV  ILRY++GT G  
Sbjct: 1157 MAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDC 1216

Query: 1219 LQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEY 1278
            L F   S  +L G++DAD AGD  +R+S+TGY F      ISW+SK Q  V+ S+TE+EY
Sbjct: 1217 LCFGG-SDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEY 1276

Query: 1279 RALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFV 1332
             A  +   E+IWL+  L ++G  Q    +++CD+ SAI ++ N ++H RTKHI+   H++
Sbjct: 1277 IAATETGKEMIWLKRFLQELGLHQ-KEYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWI 1316

[Close]
BLAST of MELO.jh033276.1 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 495.7 bits (1275), Expect = 1.6e-138
Identity = 400/1453 (27.53%), Postives = 656/1453 (45.15%), Query Frame = 0 

Query: 15   DGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQYIERLEDWDSKNHQ 74
            DG  Y  W  ++R+ L  + + ++V G +   V         +  +  ER          
Sbjct: 12   DGEKYAIWKFRIRALLAEQDVLKVVDGLMPNEVD--------DSWKKAER-----CAKST 71

Query: 75   IITWLGNTSIPAIHTQFDAFD-SAKELWDFLYTRFQSIGLAHYYQLHSTLVSLNQEMGQS 134
            II +L ++ +      F   D +A+++ + L   ++   LA    L   L+SL      S
Sbjct: 72   IIEYLSDSFL-----NFATSDITARQILENLDAVYERKSLASQLALRKRLLSLKLSSEMS 131

Query: 135  VNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPE-YESVRAALLHRNPLPSLDAAVQ 194
            +  +      + ++L  A    + +  I  L+   P  Y+ +  A+   +      A V+
Sbjct: 132  LLSHFHIFDELISELLAAGAKIEEMDKISHLLITLPSCYDGIITAIETLSEENLTLAFVK 191

Query: 195  EILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANCPT---------- 254
              L +++    + + H+D     T  +  N  +   N     + F N  T          
Sbjct: 192  NRLLDQEIK--IKNDHND-----TSKKVMNAIVHNNNNTYKNNLFKNRVTKPKKIFKGNS 251

Query: 255  ---IECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITEPSSLQL 314
               ++C +C + GHI  +C         H  +   +    +   V  ATS          
Sbjct: 252  KYKVKCHHCGREGHIKKDC--------FHYKRILNNKNKENEKQVQTATS---------- 311

Query: 315  TDLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSA-- 374
               H +   V    +T  +V     ++LDS   +H+ +D SL +  + V  +PP+  A  
Sbjct: 312  ---HGIAFMVKEVNNT--SVMDNCGFVLDSGASDHLINDESLYTDSVEV--VPPLKIAVA 371

Query: 375  -DGNSMSISHIGTV---NTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQ 434
              G  +  +  G V   N   I L +         NL SV +L + G++I F   G  + 
Sbjct: 372  KQGEFIYATKRGIVRLRNDHEITLEDVLFCKEAAGNLMSVKRLQEAGMSIEFDKSGVTIS 431

Query: 435  DSQTGQVIGTGRKVGRLFELTSLQHSPV--FPAISAPVTDNTLFQ-WHLRLGHASSNKLR 494
             +    V  +G           L + PV  F A S        F+ WH R GH S  KL 
Sbjct: 432  KNGLMVVKNSG----------MLNNVPVINFQAYSINAKHKNNFRLWHERFGHISDGKLL 491

Query: 495  SLTSTGLLNNVSQFNTFD-----CLHCKMAKQPALSFP--KSASLCDKPFGLIHSDIWGP 554
             +    + ++ S  N  +     C  C   KQ  L F   K  +   +P  ++HSD+ GP
Sbjct: 492  EIKRKNMFSDQSLLNNLELSCEICEPCLNGKQARLPFKQLKDKTHIKRPLFVVHSDVCGP 551

Query: 555  APCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDN 614
                T++   YFV+F+D ++ +   Y ++ +S ++ ++ DF    +  F+ K+  L  DN
Sbjct: 552  ITPVTLDDKNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDN 611

Query: 615  AMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWG 674
              EY  +    F  ++G     + PHT Q NG +ER  R I +  R  +      + FWG
Sbjct: 612  GREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTITEKARTMVSGAKLDKSFWG 671

Query: 675  EAALTSVYVINRLPSQVIHNIS--PFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEP 734
            EA LT+ Y+INR+PS+ + + S  P+E  +   P   HL+VFG   +V +  ++  K + 
Sbjct: 672  EAVLTATYLINRIPSRALVDSSKTPYEMWHNKKPYLKHLRVFGATVYVHI-KNKQGKFDD 731

Query: 735  RARLCCFLGYGTEHKGFRCWDPISQRLRISRHVTFWEHRMFSS----------------- 794
            ++    F+GY  E  GF+ WD ++++  ++R V   E  M +S                 
Sbjct: 732  KSFKSIFVGY--EPNGFKLWDAVNEKFIVARDVVVDETNMVNSRAVKFETVFLKDSKESE 791

Query: 795  -------------------------LSSFHASLSSPHSFFTDPSTPLFPTP--------- 854
                                     +     S  S +  F + S  +  T          
Sbjct: 792  NKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESENKNFPNDSRKIIQTEFPNESKECD 851

Query: 855  ------------------------DSSSNTTSCPPLTSELTESHTTSALPELPSVPCEEP 914
                                    D   N +      +E  ES T   L E+      + 
Sbjct: 852  NIQFLKDSKESNKYFLNESKKRKRDDHLNESKGSGNPNESRESETAEHLKEIGIDNPTKN 911

Query: 915  EHAPV--RRSTRVRETPS-------------HLKEYHCFSTIMSLVEPSSYKEASTNPLW 974
            +   +  RRS R++  P               L  +  F+ + +  +   Y++  ++  W
Sbjct: 912  DGIEIINRRSERLKTKPQISYNEEDNSLNKVVLNAHTIFNDVPNSFDEIQYRDDKSS--W 971

Query: 975  QQAMDTELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQE 1034
            ++A++TEL A    +TW     P  K  +  +W+F +K +  G+  RYKARLVA+G++Q+
Sbjct: 972  EEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQK 1031

Query: 1035 YGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTTP 1094
            Y IDYEETFAPVAR++S R +L++       + QMDVK AFLNGTL EE+YM+ P G + 
Sbjct: 1032 YQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQGISC 1091

Query: 1095 PPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALF--TRQTPNGIVLLLL 1154
                VC L +A+YGLKQA R WF  F   + +  F +SS D  ++   +   N  + +LL
Sbjct: 1092 NSDNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLL 1151

Query: 1155 YVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDL 1214
            YVDD++I   D   +++ + YL + F M DL  + +F+G+ I       YLSQ+ Y   +
Sbjct: 1152 YVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKI 1211

Query: 1215 LNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTV-TRPDIAYAVHI 1274
            L++  + +    STPL   +     +    +  T  R L+G L+Y+ + TRPD+  AV+I
Sbjct: 1212 LSKFNMENCNAVSTPLPSKINYELLNS-DEDCNTPCRSLIGCLMYIMLCTRPDLTTAVNI 1271

Query: 1275 VSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSL--VLSGFSDADWAGDPTDRRS 1334
            +S++ +   +  +  + R+LRY+KGT+   L F    +    + G+ D+DWAG   DR+S
Sbjct: 1272 LSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKS 1331

Query: 1335 TTGYCFYLGD-ALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGAPQTSP 1339
            TTGY F + D  LI W +K+Q+ V+ SSTE+EY AL +A  E +WL++LLT +     +P
Sbjct: 1332 TTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINIKLENP 1391

[Close]
BLAST of MELO.jh033276.1 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 5.1e-52
Identity = 110/224 (49.11%), Postives = 146/224 (65.18%), Query Frame = 0 

Query: 1027 LLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYA 1086
            LLLYVDD+++TG     ++ L   L   F MKDLG ++YFLG++I +  SG +LSQ KYA
Sbjct: 3    LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62

Query: 1087 SDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRPDIAYAV 1146
              +LN +G+ D    STPL P    +        DP+ +R +VG+L YLT+TRPDI+YAV
Sbjct: 63   EQILNNAGMLDCKPMSTPL-PLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAV 122

Query: 1147 HIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRS 1206
            +IV Q M  P    F  + R+LRY+KGT+ HGL     S L +  F D+DWAG  + RRS
Sbjct: 123  NIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRS 182

Query: 1207 TTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIW 1251
            TTG+C +LG  +ISW +K+Q  VSRSSTE+EYRALA   +EL W
Sbjct: 183  TTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]
BLAST of MELO.jh033276.1 vs. ExPASy TrEMBL
Match: A0A5D3DG18 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G00850 PE=4 SV=1)

HSP 1 Score: 2726 bits (7065), Expect = 0.0
Identity = 1344/1346 (99.85%), Postives = 1344/1346 (99.85%), Query Frame = 0 

Query: 1    MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ 60
            MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ
Sbjct: 1    MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ 60

Query: 61   YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH 120
            YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH
Sbjct: 61   YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH 120

Query: 121  STLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYESVRAALLH 180
            STLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYESVRAALLH
Sbjct: 121  STLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYESVRAALLH 180

Query: 181  RNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240
            RNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC
Sbjct: 181  RNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240

Query: 241  PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITEPSSLQLT 300
            PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITEPSSLQLT
Sbjct: 241  PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITEPSSLQLT 300

Query: 301  DLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSADGN 360
            DLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSADGN
Sbjct: 301  DLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSADGN 360

Query: 361  SMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQV 420
            SMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQV
Sbjct: 361  SMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQV 420

Query: 421  IGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNN 480
            IGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNN
Sbjct: 421  IGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNN 480

Query: 481  VSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFID 540
            VSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFID
Sbjct: 481  VSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFID 540

Query: 541  DYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQG 600
            DYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQG
Sbjct: 541  DYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQG 600

Query: 601  TLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQV 660
            TLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQV
Sbjct: 601  TLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQV 660

Query: 661  IHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRC 720
            IHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRC
Sbjct: 661  IHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRC 720

Query: 721  WDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSSSNTTSCP 780
            WDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDS SNTTSCP
Sbjct: 721  WDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP 780

Query: 781  PLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEPS 840
            PLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEPS
Sbjct: 781  PLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEPS 840

Query: 841  SYKEASTNPLWQQAMDTELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYK 900
            SYKEASTNPLWQQAMD ELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYK
Sbjct: 841  SYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYK 900

Query: 901  ARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEE 960
            ARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEE
Sbjct: 901  ARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEE 960

Query: 961  VYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQT 1020
            VYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQT
Sbjct: 961  VYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQT 1020

Query: 1021 PNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYL 1080
            PNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYL
Sbjct: 1021 PNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYL 1080

Query: 1081 SQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP 1140
            SQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP
Sbjct: 1081 SQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP 1140

Query: 1141 DIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGD 1200
            DIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGD
Sbjct: 1141 DIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGD 1200

Query: 1201 PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGA 1260
            PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGA
Sbjct: 1201 PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGA 1260

Query: 1261 PQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPAD 1320
            PQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPAD
Sbjct: 1261 PQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPAD 1320

Query: 1321 IFTKALHSPRFTQLIHKLKVVSTLPS 1346
            IFTKALHSPRFTQLIHKLKVVSTLPS
Sbjct: 1321 IFTKALHSPRFTQLIHKLKVVSTLPS 1346

[Close]
BLAST of MELO.jh033276.1 vs. ExPASy TrEMBL
Match: A0A5A7SZ66 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold191G00840 PE=4 SV=1)

HSP 1 Score: 2724 bits (7060), Expect = 0.0
Identity = 1343/1346 (99.78%), Postives = 1343/1346 (99.78%), Query Frame = 0 

Query: 1    MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ 60
            MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ
Sbjct: 1    MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ 60

Query: 61   YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH 120
            YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH
Sbjct: 61   YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH 120

Query: 121  STLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYESVRAALLH 180
            STLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYE VRAALLH
Sbjct: 121  STLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYEPVRAALLH 180

Query: 181  RNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240
            RNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC
Sbjct: 181  RNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240

Query: 241  PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITEPSSLQLT 300
            PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITEPSSLQLT
Sbjct: 241  PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITEPSSLQLT 300

Query: 301  DLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSADGN 360
            DLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSADGN
Sbjct: 301  DLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSADGN 360

Query: 361  SMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQV 420
            SMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQV
Sbjct: 361  SMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQV 420

Query: 421  IGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNN 480
            IGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNN
Sbjct: 421  IGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNN 480

Query: 481  VSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFID 540
            VSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFID
Sbjct: 481  VSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFID 540

Query: 541  DYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQG 600
            DYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQG
Sbjct: 541  DYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQG 600

Query: 601  TLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQV 660
            TLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQV
Sbjct: 601  TLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQV 660

Query: 661  IHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRC 720
            IHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRC
Sbjct: 661  IHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRC 720

Query: 721  WDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSSSNTTSCP 780
            WDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDS SNTTSCP
Sbjct: 721  WDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP 780

Query: 781  PLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEPS 840
            PLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEPS
Sbjct: 781  PLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEPS 840

Query: 841  SYKEASTNPLWQQAMDTELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYK 900
            SYKEASTNPLWQQAMD ELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYK
Sbjct: 841  SYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYK 900

Query: 901  ARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEE 960
            ARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEE
Sbjct: 901  ARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEE 960

Query: 961  VYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQT 1020
            VYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQT
Sbjct: 961  VYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQT 1020

Query: 1021 PNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYL 1080
            PNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYL
Sbjct: 1021 PNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYL 1080

Query: 1081 SQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP 1140
            SQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP
Sbjct: 1081 SQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP 1140

Query: 1141 DIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGD 1200
            DIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGD
Sbjct: 1141 DIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGD 1200

Query: 1201 PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGA 1260
            PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGA
Sbjct: 1201 PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGA 1260

Query: 1261 PQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPAD 1320
            PQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPAD
Sbjct: 1261 PQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPAD 1320

Query: 1321 IFTKALHSPRFTQLIHKLKVVSTLPS 1346
            IFTKALHSPRFTQLIHKLKVVSTLPS
Sbjct: 1321 IFTKALHSPRFTQLIHKLKVVSTLPS 1346

[Close]
BLAST of MELO.jh033276.1 vs. ExPASy TrEMBL
Match: A0A5A7VDW0 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G00430 PE=4 SV=1)

HSP 1 Score: 2643 bits (6852), Expect = 0.0
Identity = 1312/1346 (97.47%), Postives = 1312/1346 (97.47%), Query Frame = 0 

Query: 1    MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ 60
            MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ
Sbjct: 1    MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ 60

Query: 61   YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH 120
            YIERLEDWDSKNHQIITWLG                                LAHYYQLH
Sbjct: 61   YIERLEDWDSKNHQIITWLG--------------------------------LAHYYQLH 120

Query: 121  STLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYESVRAALLH 180
            STLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYESVRAALLH
Sbjct: 121  STLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYESVRAALLH 180

Query: 181  RNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240
            RNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC
Sbjct: 181  RNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240

Query: 241  PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITEPSSLQLT 300
            PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITEPSSLQLT
Sbjct: 241  PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITEPSSLQLT 300

Query: 301  DLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSADGN 360
            DLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSADGN
Sbjct: 301  DLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSADGN 360

Query: 361  SMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQV 420
            SMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQV
Sbjct: 361  SMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQV 420

Query: 421  IGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNN 480
            IGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNN
Sbjct: 421  IGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNN 480

Query: 481  VSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFID 540
            VSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFID
Sbjct: 481  VSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFID 540

Query: 541  DYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQG 600
            DYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQG
Sbjct: 541  DYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQG 600

Query: 601  TLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQV 660
            TLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQV
Sbjct: 601  TLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQV 660

Query: 661  IHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRC 720
            IHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRC
Sbjct: 661  IHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRC 720

Query: 721  WDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSSSNTTSCP 780
            WDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDS SNTTSCP
Sbjct: 721  WDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP 780

Query: 781  PLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEPS 840
            PLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEPS
Sbjct: 781  PLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEPS 840

Query: 841  SYKEASTNPLWQQAMDTELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYK 900
            SYKEASTNPLWQQAMD ELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYK
Sbjct: 841  SYKEASTNPLWQQAMDNELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYK 900

Query: 901  ARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEE 960
            ARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEE
Sbjct: 901  ARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEE 960

Query: 961  VYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQT 1020
            VYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQT
Sbjct: 961  VYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQT 1020

Query: 1021 PNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYL 1080
            PNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYL
Sbjct: 1021 PNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYL 1080

Query: 1081 SQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP 1140
            SQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP
Sbjct: 1081 SQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP 1140

Query: 1141 DIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGD 1200
            DIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGD
Sbjct: 1141 DIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGD 1200

Query: 1201 PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGA 1260
            PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGA
Sbjct: 1201 PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGA 1260

Query: 1261 PQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPAD 1320
            PQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPAD
Sbjct: 1261 PQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPAD 1314

Query: 1321 IFTKALHSPRFTQLIHKLKVVSTLPS 1346
            IFTKALHSPRFTQLIHKLKVVSTLPS
Sbjct: 1321 IFTKALHSPRFTQLIHKLKVVSTLPS 1314

[Close]
BLAST of MELO.jh033276.1 vs. ExPASy TrEMBL
Match: A0A5A7UVX4 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G006520 PE=4 SV=1)

HSP 1 Score: 2494 bits (6463), Expect = 0.0
Identity = 1247/1346 (92.64%), Postives = 1253/1346 (93.09%), Query Frame = 0 

Query: 1    MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ 60
            MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAE+IQ
Sbjct: 1    MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAENIQ 60

Query: 61   YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH 120
            YIE+LEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAK+LWDFLYTRFQSIGLAHYYQLH
Sbjct: 61   YIEKLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKKLWDFLYTRFQSIGLAHYYQLH 120

Query: 121  STLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYESVRAALLH 180
            STLVSLNQE+GQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYE VRAALLH
Sbjct: 121  STLVSLNQEVGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYEFVRAALLH 180

Query: 181  RNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240
            RN LPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC
Sbjct: 181  RNSLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240

Query: 241  PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATSDITEPSSLQLT 300
            PTIEC+YCHKRGHILDNCPTRPPRPPGHSHKPKF HKAGSSSVVAAATSDITEPSSLQLT
Sbjct: 241  PTIECKYCHKRGHILDNCPTRPPRPPGHSHKPKFFHKAGSSSVVAAATSDITEPSSLQLT 300

Query: 301  DLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSADGN 360
            DLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSH PVQSLPPIHSADGN
Sbjct: 301  DLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHTPVQSLPPIHSADGN 360

Query: 361  SMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQV 420
            SMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQV
Sbjct: 361  SMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQV 420

Query: 421  IGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNN 480
            IGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNN
Sbjct: 421  IGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNN 480

Query: 481  VSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFID 540
            VSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVN          
Sbjct: 481  VSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVN---------- 540

Query: 541  DYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQG 600
                                                     DNAMEYKDSRFLSFLAQQG
Sbjct: 541  -----------------------------------------DNAMEYKDSRFLSFLAQQG 600

Query: 601  TLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQV 660
            TLIQRSCPHTSQQNGRAERKHRHILDSV                                
Sbjct: 601  TLIQRSCPHTSQQNGRAERKHRHILDSV-------------------------------- 660

Query: 661  IHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRC 720
            IHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRC
Sbjct: 661  IHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFRC 720

Query: 721  WDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSSSNTTSCP 780
            WDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDS SNTTSCP
Sbjct: 721  WDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSPSNTTSCP 780

Query: 781  PLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEPS 840
            PLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEPS
Sbjct: 781  PLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEPS 840

Query: 841  SYKEASTNPLWQQAMDTELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYK 900
            SYKEASTNPLWQQAMD ELQAL KTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYK
Sbjct: 841  SYKEASTNPLWQQAMDNELQALDKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERYK 900

Query: 901  ARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEE 960
            ARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEE
Sbjct: 901  ARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSEE 960

Query: 961  VYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQT 1020
            VYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQT
Sbjct: 961  VYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQT 1020

Query: 1021 PNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYL 1080
            PNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYF+GLEISSSSSGYYL
Sbjct: 1021 PNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFIGLEISSSSSGYYL 1080

Query: 1081 SQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP 1140
            SQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP
Sbjct: 1081 SQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP 1140

Query: 1141 DIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGD 1200
            DIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGD
Sbjct: 1141 DIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGD 1200

Query: 1201 PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGA 1260
            PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDM A
Sbjct: 1201 PTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMRA 1260

Query: 1261 PQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPAD 1320
            PQTSP ILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPAD
Sbjct: 1261 PQTSPIILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPAD 1263

Query: 1321 IFTKALHSPRFTQLIHKLKVVSTLPS 1346
            IFTKALHSPRFTQLIHKLKV STLPS
Sbjct: 1321 IFTKALHSPRFTQLIHKLKVFSTLPS 1263

[Close]
BLAST of MELO.jh033276.1 vs. ExPASy TrEMBL
Match: A0A5A7T587 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold191G001390 PE=4 SV=1)

HSP 1 Score: 2175 bits (5636), Expect = 0.0
Identity = 1112/1303 (85.34%), Postives = 1125/1303 (86.34%), Query Frame = 0 

Query: 1    MEKNDVARPISTILDGTNYITWAHQMRSFLIGRKLWRIVTGDITKPVKPIVHETSAEDIQ 60
            MEKNDVARPISTILD TNYITWAHQMRSFLIGRKLWRIVTGDIT+PVKPIVHETSAEDIQ
Sbjct: 1    MEKNDVARPISTILDDTNYITWAHQMRSFLIGRKLWRIVTGDITEPVKPIVHETSAEDIQ 60

Query: 61   YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH 120
            YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH
Sbjct: 61   YIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLH 120

Query: 121  STLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYESVRAALLH 180
            STLVSLNQE+GQSVN+YLATLQPIWTQLDQAKISPDHIRLIKVL+GLRP+YESVRAALLH
Sbjct: 121  STLVSLNQEVGQSVNKYLATLQPIWTQLDQAKISPDHIRLIKVLVGLRPKYESVRAALLH 180

Query: 181  RNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240
            RNPLPSLDAAV+EILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC
Sbjct: 181  RNPLPSLDAAVEEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANC 240

Query: 241  PTIECRYCHKRGHILDNCPTRPPRPPGHSHKPKFSHKAGSSSVVAAATS-DITEPSSLQL 300
            PTIE RYCHKRGHILDNCPTRP RPPGHSHKPKFSHKAGSSSVVAAATS DITEPSS   
Sbjct: 241  PTIEYRYCHKRGHILDNCPTRPSRPPGHSHKPKFSHKAGSSSVVAAATSSDITEPSS--- 300

Query: 301  TDLHDLLKQVISSQSTALAVTPGTSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSADG 360
                                   TSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSAD 
Sbjct: 301  -----------------------TSWLLDSACCNHMTSDISLLSSHIPVQSLPPIHSADC 360

Query: 361  NSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQ 420
            NSMSISHIGTV                                          QDSQTGQ
Sbjct: 361  NSMSISHIGTV------------------------------------------QDSQTGQ 420

Query: 421  VIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLN 480
            VIGT RK                              WHLRLGHASSNKLRSLTSTGLLN
Sbjct: 421  VIGTRRK------------------------------WHLRLGHASSNKLRSLTSTGLLN 480

Query: 481  NVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFI 540
            NVSQFNTFDCLHCKMAKQPALSFPKSASLC+KPFGLIHSDIWGPAPCPTVN         
Sbjct: 481  NVSQFNTFDCLHCKMAKQPALSFPKSASLCNKPFGLIHSDIWGPAPCPTVN--------- 540

Query: 541  DDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQ 600
                                                      DNAMEYKDSRFLSFLAQQ
Sbjct: 541  ------------------------------------------DNAMEYKDSRFLSFLAQQ 600

Query: 601  GTLIQRSCPHTSQQNGRAERKHRHILDSVRAQLLSGSCPEKFWGEAALTSVYVINRLPSQ 660
            GTLIQRSCPHTSQQNGRAERKHRHILDS+RAQLL GSC EKFWGEA LTSVYVINRLPSQ
Sbjct: 601  GTLIQRSCPHTSQQNGRAERKHRHILDSIRAQLLFGSCSEKFWGEAVLTSVYVINRLPSQ 660

Query: 661  VIHNISPFERLYGTPPTYSHLKVFGCACFVLLHSHEHTKLEPRARLCCFLGYGTEHKGFR 720
            VIHNISPFERLYGTPP+YSHLKVFGCA FVLLH HEHTKLEPRA LCCFLGYGT+HKGFR
Sbjct: 661  VIHNISPFERLYGTPPSYSHLKVFGCAYFVLLHPHEHTKLEPRACLCCFLGYGTKHKGFR 720

Query: 721  CWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPHSFFTDPSTPLFPTPDSSSNTTSC 780
            CWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSP+SFFTDPSTPLFPTPDS SNTTSC
Sbjct: 721  CWDPISQRLRISRHVTFWEHRMFSSLSSFHASLSSPNSFFTDPSTPLFPTPDSPSNTTSC 780

Query: 781  PPLTSELTESHTTSALPELPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMSLVEP 840
            PPLTSELTESHTTSALP+LPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIM LVEP
Sbjct: 781  PPLTSELTESHTTSALPDLPSVPCEEPEHAPVRRSTRVRETPSHLKEYHCFSTIMPLVEP 840

Query: 841  SSYKEASTNPLWQQAMDTELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIERY 900
            SSYKEASTNPL QQAMD ELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTH DGSIERY
Sbjct: 841  SSYKEASTNPLRQQAMDDELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHFDGSIERY 900

Query: 901  KARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIAAAKQWPLLQMDVKNAFLNGTLSE 960
            KA L+AKGYSQEYGIDYEETFAPVARMTSVRSLLAI AAKQWPLLQMDVKNAFLNG LSE
Sbjct: 901  KACLIAKGYSQEYGIDYEETFAPVARMTSVRSLLAITAAKQWPLLQMDVKNAFLNGILSE 960

Query: 961  EVYMKPPPGTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQ 1020
            EVYMKPP  TTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQ
Sbjct: 961  EVYMKPPLDTTPPPQKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHDSALFTRQ 1020

Query: 1021 TPNGIVLLLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYY 1080
            TPNGIVLLLLYVDDMIIT DD QAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYY
Sbjct: 1021 TPNGIVLLLLYVDDMIITSDDRQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYY 1080

Query: 1081 LSQAKYASDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTR 1140
            LSQAKY SDLLNRSGITDSATFS PLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTR
Sbjct: 1081 LSQAKYTSDLLNRSGITDSATFSIPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTR 1140

Query: 1141 PDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAG 1200
            PDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAG
Sbjct: 1141 PDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAG 1154

Query: 1201 DPTDRRSTTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMG 1260
            DPTDRRSTT YCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMG
Sbjct: 1201 DPTDRRSTTSYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMG 1154

Query: 1261 APQTSPTILHCDNHSAIQIAHNDVFHERTKHIENDCHFVRHHL 1302
            APQTSPTILHCDNHSAIQ AHNDVFHERTKHIENDCHFV HHL
Sbjct: 1261 APQTSPTILHCDNHSAIQSAHNDVFHERTKHIENDCHFVCHHL 1154

[Close]
BLAST of MELO.jh033276.1 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 483.0 bits (1242), Expect = 7.7e-136
Identity = 257/552 (46.56%), Postives = 350/552 (63.41%), Query Frame = 0 

Query: 782  LTSELTESHTTSALPELPSVPCEEPEHAP-VRRSTRVRETPSHLKEYHCFST-------- 841
            + S+   S ++S++  +PS   +     P V  S R    P++L++Y+C S         
Sbjct: 1    MVSDADASTSSSSIDIMPSANIQNDVPEPSVHTSHRRTRKPAYLQDYYCHSVASLTIHDI 60

Query: 842  -------------------IMSLVEPSSYKEASTNPLWQQAMDTELQALAKTHTWDYVDL 901
                               I    EPS+Y EA    +W  AMD E+ A+  THTW+   L
Sbjct: 61   SQFLSYEKVSPLYHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTL 120

Query: 902  PPGKKPIGCKWIFKIKTHSDGSIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLL 961
            PP KKPIGCKW++KIK +SDG+IERYKARLVAKGY+Q+ GID+ ETF+PV ++TSV+ +L
Sbjct: 121  PPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLIL 180

Query: 962  AIAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPP------GTTPPPQKVCLLRRALYGLK 1021
            AI+A   + L Q+D+ NAFLNG L EE+YMK PP      G + PP  VC L++++YGLK
Sbjct: 181  AISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLK 240

Query: 1022 QAPRAWFATFSSTITQLGFTSSSHDSALFTRQTPNGIVLLLLYVDDMIITGDDPQAISDL 1081
            QA R WF  FS T+   GF  S  D   F + T    + +L+YVDD+II  ++  A+ +L
Sbjct: 241  QASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDEL 300

Query: 1082 QCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSATFSTPLDP 1141
            +  L   F+++DLG L YFLGLEI+ S++G  + Q KYA DLL+ +G+      S P+DP
Sbjct: 301  KSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDP 360

Query: 1142 NVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRI 1201
            +V  +   G    D   YR+L+G L+YL +TR DI++AV+ +SQF  APR  H  AV++I
Sbjct: 361  SVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKI 420

Query: 1202 LRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLGDALISWRSKKQS 1261
            L YIKGT+G GL +SSQ+ + L  FSDA +      RRST GYC +LG +LISW+SKKQ 
Sbjct: 421  LHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQ 480

Query: 1262 VVSRSSTESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNHSAIQIAHNDVFHER 1300
            VVS+SS E+EYRAL+ AT E++WL     ++  P + PT+L CDN +AI IA N VFHER
Sbjct: 481  VVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHER 540

[Close]
BLAST of MELO.jh033276.1 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 208.4 bits (529), Expect = 3.6e-53
Identity = 110/224 (49.11%), Postives = 146/224 (65.18%), Query Frame = 0 

Query: 1027 LLLYVDDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYA 1086
            LLLYVDD+++TG     ++ L   L   F MKDLG ++YFLG++I +  SG +LSQ KYA
Sbjct: 3    LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62

Query: 1087 SDLLNRSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRPDIAYAV 1146
              +LN +G+ D    STPL P    +        DP+ +R +VG+L YLT+TRPDI+YAV
Sbjct: 63   EQILNNAGMLDCKPMSTPL-PLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAV 122

Query: 1147 HIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRS 1206
            +IV Q M  P    F  + R+LRY+KGT+ HGL     S L +  F D+DWAG  + RRS
Sbjct: 123  NIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRS 182

Query: 1207 TTGYCFYLGDALISWRSKKQSVVSRSSTESEYRALADATSELIW 1251
            TTG+C +LG  +ISW +K+Q  VSRSSTE+EYRALA   +EL W
Sbjct: 183  TTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]
BLAST of MELO.jh033276.1 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 104.4 bits (259), Expect = 7.4e-22
Identity = 49/99 (49.49%), Postives = 67/99 (67.68%), Query Frame = 0 

Query: 838 EPSSYKEASTNPLWQQAMDTELQALAKTHTWDYVDLPPGKKPIGCKWIFKIKTHSDGSIE 897
           EP S   A  +P W QAM  EL AL++  TW  V  P  +  +GCKW+FK K HSDG+++
Sbjct: 27  EPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLD 86

Query: 898 RYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAIA 937
           R KARLVAKG+ QE GI + ET++PV R  ++R++L +A
Sbjct: 87  RLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125

[Close]
BLAST of MELO.jh033276.1 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 90.9 bits (224), Expect = 8.5e-18
Identity = 41/79 (51.90%), Postives = 57/79 (72.15%), Query Frame = 0 

Query: 1133 IYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGF 1192
            +YLT+TRPD+ +AV+ +SQF +A RT    AV ++L Y+KGT+G GL +S+ S L L  F
Sbjct: 1    MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 1193 SDADWAGDPTDRRSTTGYC 1212
            +D+DWA  P  RRS TG+C
Sbjct: 61   ADSDWASCPDTRRSVTGFC 79

The following BLAST results are available for this feature:
BLAST of MELO.jh033276.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0043149.10.099.85Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
KAA0036574.10.099.78Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
KAA0065380.10.097.47Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
KAA0058316.10.092.64Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
KAA0036615.10.085.34Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
BLAST of MELO.jh033276.1 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q94HW24.4e-20533.45Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
Q9ZT945.4e-19531.98Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
P109783.3e-16831.04Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
P041461.6e-13827.53Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
P925195.1e-5249.11Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ... [more]
BLAST of MELO.jh033276.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DG180.099.85Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A5A7SZ660.099.78Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A5A7VDW00.097.47Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A5A7UVX40.092.64Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A5A7T5870.085.34Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
BLAST of MELO.jh033276.1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G23160.17.7e-13646.56cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
ATMG00810.13.6e-5349.11DNA/RNA polymerases superfamily protein [more]
ATMG00820.17.4e-2249.49Reverse transcriptase (RNA-dependent DNA polymerase) [more]
ATMG00240.18.5e-1851.90Gag-Pol-related retrotransposon family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 226..242
e-value: 1.2
score: 10.8
coord: 244..260
e-value: 0.032
score: 20.4
IPR025724GAG-pre-integrase domainPFAMPF13976gag_pre-integrscoord: 443..497
e-value: 2.7E-9
score: 36.7
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 866..1105
e-value: 3.3E-75
score: 252.8
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 68..200
e-value: 1.2E-10
score: 41.3
NoneNo IPR availableGENE3D4.10.60.10coord: 212..264
e-value: 3.3E-6
score: 28.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 768..817
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 768..796
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 354..1225
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 1191..1329
e-value: 2.52339E-78
score: 252.389
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 507..683
e-value: 6.4E-37
score: 128.8
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 511..610
e-value: 7.0E-13
score: 48.8
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 508..674
score: 20.299007
IPR025314Domain of unknown function DUF4219PFAMPF13961DUF4219coord: 14..39
e-value: 1.1E-7
score: 31.4
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 865..1296
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 510..683
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 217..262

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh033276.1.t1MELO.jh033276.1.t1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding