MELO.jh033252.1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh033252.1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Sister chromatid cohesion protein
Location	chr03: 26987368 .. 26989050 (-)
RNA-Seq Expression	MELO.jh033252.1
Synteny	MELO.jh033252.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGCCACAGAGAATGATGTTTATGACTTTTTCTCTCATTGTGGCACGGTCGAGCATGTAGAAATCCTCAGGTGAATTAAACATGAATCCCCTGGCTTAATCGTTTATTACAGTTTGTAAGCATATGTGTACCTATTACCATTATCTTGTTATACATAAATCAAAAGCTTTGAAACAATTTGACAAGGTATGCTAAAAACCTGTTTCAGTTTTATCAACTTCAACGAGATCTTACATAGGAACTTACTGGAGCTTCAATAATCAATTAATAAACTTGGAAAATATGAATTTCATATTTGTTATTGCTGTTGCTGTTGTGTCACACCGTGATTGTAAGTCAACTCGACAGCTGTTGTCTTTAACTCATCTGCATATACCATCAAGGCTATGGCGTACTGCAGAGTCAATTGGTTGTGCATTGAAATTTATAGCATTTTGTTAACCTTCAGTTTGCTAAGATGGATGGAAGTAGAAGTTTAAAGTTCACCTTCTGTTCAAGATTCTCAACCTTGGTAAGTATCCTCATTCCCAACGCTTGTATATGGAAACAAATTCTAAGTTAGGATCGAAAATTTCTTAGGTCTTATTCAATAATCATTTAGTTTCTTTTACAATTATAATTGTTGGTTTTTACCTAATGACTTTTTTTCACATGATTTCTAGATTTGAATTCTCAACCAAATTCGAATAACAAAAACAAGTTTGTAAAGACTATCAAAATATGTATGATTACGTTCTTGAATTATTTTTCTGGGCAGATGCAAGCATTGCAAAATATGTATGATTACGTTCTTGACGCGGAAGGTCAAATGGGAACAGATGAAGCTGGTGATGGAGCTGGCCCTGACACTGTGGAGAGTGGCCAAAGTGTACCTGTTGCTGCTGGTGCCGGAGATACCAACATTTGTGGTGGTATTGTTCAGTTGTATTGGGAAAGGATTCTGGGACGAAGCTTAGATTTAAATGGCCAAGTTCGTCAAGTTGCCCTCAAGGTAAAAAGTTCTGGATTATGATTCTACTAGAAAGCTGTCTGTGACAACCATCTTAACCTGGACGACTTTTTTGTGGATACTTTAATGTGTATGTATTTCCAGGCCATAGTAAGCTTGTGGGTTGGTGCTGTGATTAGTAGCTGGTGCAATTTCATAACTGTCTTGTATGTTGGTAAGTGTTTATAGATTTTGCTTCTCAAAACATTTACATCTTTAATTTCTTTGATGATATATATCATTTACCTATAACCACTAAAGAGATTTAGAGTGTTTTTGGTTGATTTAGATATTTGATATCATTTAGATATTTGTACAATAGTGTTCTTTGAGCGTTCCGATATTATATGTAGATAACAATTGTTTTTGTCGTGCTTGATTGAATGTAGATAACTGTATATTTTTCCAGGTCATTTTCTACTAGAGGACGATGATAAGTTTCTAGATAAGGTTTGAGCTACAGTTCAGGAAGAGGAATGTCAAGCCCTTGCTGCATTTGGTGCCTGTTTCCAATATTAATAATTGTTTGAAGAAGCATTTTCGAGACCTTTAAAATGTCGTGATTTTTGAATTTATATATAATTTTGTTTGGTTGCAGTTAATTTTACAAGCGTGTTTTCATTGTTGGTGGAATCAGACTTGAATAATATGGGATTTATGTGCTTTAAGATATGAATGGGATTTATTGTTGCTT

mRNA sequence

AAAGCCACAGAGAATGATGTTTATGACTTTTTCTCTCATTGTGGCACGGTCGAGCATGTAGAAATCCTCAGTTTTATCAACTTCAACGAGATCTTACATAGGAACTTACTGGAGCTTCAATAATCAATTAATAAACTTGGAAAATATGAATTTCATATTTGTTATTGCTGTTGCTGTTGTGTCACACCGTGATTTTTGCTAAGATGGATGGAAGTAGAAGTTTAAAGTTCACCTTCTGTTCAAGATTCTCAACCTTGATGCAAGCATTGCAAAATATGTATGATTACGTTCTTGACGCGGAAGGTCAAATGGGAACAGATGAAGCTGGTGATGGAGCTGGCCCTGACACTGTGGAGAGTGGCCAAAGTGTACCTGTTGCTGCTGGTGCCGGAGATACCAACATTTGTGGTGGTATTGTTCAGTTGTATTGGGAAAGGATTCTGGGACGAAGCTTAGATTTAAATGGCCAAGTTCGTCAAGTTGCCCTCAAGGCCATAGTAAGCTTGTGGGTTGGTGCTGTGATTAGTAGCTGGTGCAATTTCATAACTGTCTTGTATGTTGGTCATTTTCTACTAGAGGACGATGATAAGTTTCTAGATAAGGTTTGAGCTACAGTTCAGGAAGAGGAATGTCAAGCCCTTGCTGCATTTGGTGCCTGTTTCCAATATTAATAATTGTTTGAAGAAGCATTTTCGAGACCTTTAAAATGTCGTGATTTTTGAATTTATATATAATTTTGTTTGGTTGCAGTTAATTTTACAAGCGTGTTTTCATTGTTGGTGGAATCAGACTTGAATAATATGGGATTTATGTGCTTTAAGATATGAATGGGATTTATTGTTGCTT

Coding sequence (CDS)

ATGGATGGAAGTAGAAGTTTAAAGTTCACCTTCTGTTCAAGATTCTCAACCTTGATGCAAGCATTGCAAAATATGTATGATTACGTTCTTGACGCGGAAGGTCAAATGGGAACAGATGAAGCTGGTGATGGAGCTGGCCCTGACACTGTGGAGAGTGGCCAAAGTGTACCTGTTGCTGCTGGTGCCGGAGATACCAACATTTGTGGTGGTATTGTTCAGTTGTATTGGGAAAGGATTCTGGGACGAAGCTTAGATTTAAATGGCCAAGTTCGTCAAGTTGCCCTCAAGGCCATAGTAAGCTTGTGGGTTGGTGCTGTGATTAGTAGCTGGTGCAATTTCATAACTGTCTTGTATGTTGGTCATTTTCTACTAGAGGACGATGATAAGTTTCTAGATAAGGTTTGA

Protein sequence

MDGSRSLKFTFCSRFSTLMQALQNMYDYVLDAEGQMGTDEAGDGAGPDTVESGQSVPVAAGAGDTNICGGIVQLYWERILGRSLDLNGQVRQVALKAIVSLWVGAVISSWCNFITVLYVGHFLLEDDDKFLDKV

Homology

[Close]

BLAST of MELO.jh033252.1 vs. NCBI nr
Match: KAA0065067.1 (nipped-B-like protein isoform X3 [Cucumis melo var. makuwa])

HSP 1 Score: 270 bits (689), Expect = 3.28e-89
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 1   MDGSRSLKFTFCSRFSTLMQALQNMYDYVLDAEGQMGTDEAGDGAGPDTVESGQSVPVAA 60
           MDGSRSLKFTFCSRFSTLMQALQNMYDYVLDAEGQMGTDEAGDGAGPDTVESGQSVPVAA
Sbjct: 129 MDGSRSLKFTFCSRFSTLMQALQNMYDYVLDAEGQMGTDEAGDGAGPDTVESGQSVPVAA 188

Query: 61  GAGDTNICGGIVQLYWERILGRSLDLNGQVRQVALKAIVSLWVGAVISSWCNFITVLYVG 120
           GAGDTNICGGIVQLYWERILGRSLDLNGQVRQVALKAIVSLWVGAVISSWCNFITVLYVG
Sbjct: 189 GAGDTNICGGIVQLYWERILGRSLDLNGQVRQVALKAIVSLWVGAVISSWCNFITVLYVG 248

Query: 121 HFLLEDDDKFLDKV 134
           HFLLEDDDKFLDKV
Sbjct: 249 HFLLEDDDKFLDKV 262

[Close]

BLAST of MELO.jh033252.1 vs. NCBI nr
Match: KAA0058102.1 (nipped-B-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 231 bits (588), Expect = 7.16e-72
Identity = 113/116 (97.41%), Postives = 116/116 (100.00%), Query Frame = 0


Query: 19  MQALQNMYDYVLDAEGQMGTDEAGDGAGPDTVESGQSVPVAAGAGDTNICGGIVQLYWER 78
           MQALQNMYDY+LDAEGQMGTDEAGDGAGPDTVESGQSVPVAAGAGDTNICGGIVQLYWER
Sbjct: 303 MQALQNMYDYLLDAEGQMGTDEAGDGAGPDTVESGQSVPVAAGAGDTNICGGIVQLYWER 362

Query: 79  ILGRSLDLNGQVRQVALKAIVSLWVGAVISSWCNFITVLYVGHFLLEDDDKFLDKV 134
           ILGRSLDLNGQVRQ+ALKAIVSLWVGAVISSWCNFITVLYVGHFLLE+DDKFLDKV
Sbjct: 363 ILGRSLDLNGQVRQIALKAIVSLWVGAVISSWCNFITVLYVGHFLLEEDDKFLDKV 418

[Close]

BLAST of MELO.jh033252.1 vs. NCBI nr
Match: KAA0032422.1 (nipped-B-like protein isoform X3 [Cucumis melo var. makuwa] >TYK05630.1 nipped-B-like protein isoform X3 [Cucumis melo var. makuwa] >TYK19225.1 nipped-B-like protein isoform X3 [Cucumis melo var. makuwa])

HSP 1 Score: 198 bits (504), Expect = 2.27e-63
Identity = 97/99 (97.98%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 36  MGTDEAGDGAGPDTVESGQSVPVAAGAGDTNICGGIVQLYWERILGRSLDLNGQVRQVAL 95
           MGTDEAGDGAGPDTVESGQSVPVAAGAGDTNICGGIVQLYWERILGRSLDLNGQVRQ+AL
Sbjct: 1   MGTDEAGDGAGPDTVESGQSVPVAAGAGDTNICGGIVQLYWERILGRSLDLNGQVRQIAL 60

Query: 96  KAIVSLWVGAVISSWCNFITVLYVGHFLLEDDDKFLDKV 134
           KAIVSLWVGAVISSWCNFITVLYVGHFLLE+DDKFLDKV
Sbjct: 61  KAIVSLWVGAVISSWCNFITVLYVGHFLLEEDDKFLDKV 99

[Close]

BLAST of MELO.jh033252.1 vs. NCBI nr
Match: KAA0038966.1 (nipped-B-like protein isoform X3 [Cucumis melo var. makuwa])

HSP 1 Score: 175 bits (444), Expect = 3.38e-54
Identity = 85/87 (97.70%), Postives = 87/87 (100.00%), Query Frame = 0


Query: 48  DTVESGQSVPVAAGAGDTNICGGIVQLYWERILGRSLDLNGQVRQVALKAIVSLWVGAVI 107
           DTVESGQSVPVAAGAGDTNICGGIVQLYWERILGRSLDLNGQVRQ+ALKAIVSLWVGAVI
Sbjct: 15  DTVESGQSVPVAAGAGDTNICGGIVQLYWERILGRSLDLNGQVRQIALKAIVSLWVGAVI 74

Query: 108 SSWCNFITVLYVGHFLLEDDDKFLDKV 134
           SSWCNFITVLYVGHFLLE+DDKFLDKV
Sbjct: 75  SSWCNFITVLYVGHFLLEEDDKFLDKV 101

[Close]

BLAST of MELO.jh033252.1 vs. NCBI nr
Match: KAA0039563.1 (protein transport protein SFT2-like [Cucumis melo var. makuwa])

HSP 1 Score: 176 bits (445), Expect = 7.47e-51
Identity = 85/89 (95.51%), Postives = 87/89 (97.75%), Query Frame = 0


Query: 46  GPDTVESGQSVPVAAGAGDTNICGGIVQLYWERILGRSLDLNGQVRQVALKAIVSLWVGA 105
           GPDTVESGQSVPVAAGAGDTNICGGIVQLYWERILGRSLDLNGQV Q+ALKAIVSLWVGA
Sbjct: 291 GPDTVESGQSVPVAAGAGDTNICGGIVQLYWERILGRSLDLNGQVHQIALKAIVSLWVGA 350

Query: 106 VISSWCNFITVLYVGHFLLEDDDKFLDKV 134
           VISSWCNFI VLYVGHFLLE+DDKFLDKV
Sbjct: 351 VISSWCNFIIVLYVGHFLLEEDDKFLDKV 379

[Close]

BLAST of MELO.jh033252.1 vs. ExPASy Swiss-Prot
Match: A5HEI1 (Sister chromatid cohesion protein SCC2 OS=Arabidopsis thaliana OX=3702 GN=SCC2 PE=1 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 2.1e-22
Identity = 49/80 (61.25%), Postives = 64/80 (80.00%), Query Frame = 0


Query: 19   MQALQNMYDYVLDAEGQMGTDEAGDGAGPDTVESGQSVPVAAGAGDTNICGGIVQLYWER 78
            MQALQNMY+Y+LDAE Q+G+++A D       + G +VPVAAGAGDTNICGGIVQL+W++
Sbjct: 1339 MQALQNMYEYLLDAEKQLGSEKASDNTVNSVEQGGHNVPVAAGAGDTNICGGIVQLFWDK 1398

Query: 79   ILGRSLDLNGQVRQVALKAI 99
            ILGR LD + Q+RQ +LK +
Sbjct: 1399 ILGRCLDFDDQIRQTSLKIV 1418

[Close]

BLAST of MELO.jh033252.1 vs. ExPASy TrEMBL
Match: A0A5A7VDE2 (Nipped-B-like protein isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003970 PE=4 SV=1)

HSP 1 Score: 270 bits (689), Expect = 1.59e-89
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 1   MDGSRSLKFTFCSRFSTLMQALQNMYDYVLDAEGQMGTDEAGDGAGPDTVESGQSVPVAA 60
           MDGSRSLKFTFCSRFSTLMQALQNMYDYVLDAEGQMGTDEAGDGAGPDTVESGQSVPVAA
Sbjct: 129 MDGSRSLKFTFCSRFSTLMQALQNMYDYVLDAEGQMGTDEAGDGAGPDTVESGQSVPVAA 188

Query: 61  GAGDTNICGGIVQLYWERILGRSLDLNGQVRQVALKAIVSLWVGAVISSWCNFITVLYVG 120
           GAGDTNICGGIVQLYWERILGRSLDLNGQVRQVALKAIVSLWVGAVISSWCNFITVLYVG
Sbjct: 189 GAGDTNICGGIVQLYWERILGRSLDLNGQVRQVALKAIVSLWVGAVISSWCNFITVLYVG 248

Query: 121 HFLLEDDDKFLDKV 134
           HFLLEDDDKFLDKV
Sbjct: 249 HFLLEDDDKFLDKV 262

[Close]

BLAST of MELO.jh033252.1 vs. ExPASy TrEMBL
Match: A0A5A7UQF8 (Nipped-B-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G004100 PE=4 SV=1)

HSP 1 Score: 231 bits (588), Expect = 3.47e-72
Identity = 113/116 (97.41%), Postives = 116/116 (100.00%), Query Frame = 0


Query: 19  MQALQNMYDYVLDAEGQMGTDEAGDGAGPDTVESGQSVPVAAGAGDTNICGGIVQLYWER 78
           MQALQNMYDY+LDAEGQMGTDEAGDGAGPDTVESGQSVPVAAGAGDTNICGGIVQLYWER
Sbjct: 303 MQALQNMYDYLLDAEGQMGTDEAGDGAGPDTVESGQSVPVAAGAGDTNICGGIVQLYWER 362

Query: 79  ILGRSLDLNGQVRQVALKAIVSLWVGAVISSWCNFITVLYVGHFLLEDDDKFLDKV 134
           ILGRSLDLNGQVRQ+ALKAIVSLWVGAVISSWCNFITVLYVGHFLLE+DDKFLDKV
Sbjct: 363 ILGRSLDLNGQVRQIALKAIVSLWVGAVISSWCNFITVLYVGHFLLEEDDKFLDKV 418

[Close]

BLAST of MELO.jh033252.1 vs. ExPASy TrEMBL
Match: A0A5A7SMZ0 (Nipped-B-like protein isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1493G00220 PE=4 SV=1)

HSP 1 Score: 198 bits (504), Expect = 1.10e-63
Identity = 97/99 (97.98%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 36  MGTDEAGDGAGPDTVESGQSVPVAAGAGDTNICGGIVQLYWERILGRSLDLNGQVRQVAL 95
           MGTDEAGDGAGPDTVESGQSVPVAAGAGDTNICGGIVQLYWERILGRSLDLNGQVRQ+AL
Sbjct: 1   MGTDEAGDGAGPDTVESGQSVPVAAGAGDTNICGGIVQLYWERILGRSLDLNGQVRQIAL 60

Query: 96  KAIVSLWVGAVISSWCNFITVLYVGHFLLEDDDKFLDKV 134
           KAIVSLWVGAVISSWCNFITVLYVGHFLLE+DDKFLDKV
Sbjct: 61  KAIVSLWVGAVISSWCNFITVLYVGHFLLEEDDKFLDKV 99

[Close]

BLAST of MELO.jh033252.1 vs. ExPASy TrEMBL
Match: A0A5A7TAA2 (Nipped-B-like protein isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84G00440 PE=4 SV=1)

HSP 1 Score: 175 bits (444), Expect = 1.64e-54
Identity = 85/87 (97.70%), Postives = 87/87 (100.00%), Query Frame = 0


Query: 48  DTVESGQSVPVAAGAGDTNICGGIVQLYWERILGRSLDLNGQVRQVALKAIVSLWVGAVI 107
           DTVESGQSVPVAAGAGDTNICGGIVQLYWERILGRSLDLNGQVRQ+ALKAIVSLWVGAVI
Sbjct: 15  DTVESGQSVPVAAGAGDTNICGGIVQLYWERILGRSLDLNGQVRQIALKAIVSLWVGAVI 74

Query: 108 SSWCNFITVLYVGHFLLEDDDKFLDKV 134
           SSWCNFITVLYVGHFLLE+DDKFLDKV
Sbjct: 75  SSWCNFITVLYVGHFLLEEDDKFLDKV 101

[Close]

BLAST of MELO.jh033252.1 vs. ExPASy TrEMBL
Match: A0A5A7T9C1 (Vesicle transport protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold744G00330 PE=3 SV=1)

HSP 1 Score: 176 bits (445), Expect = 3.62e-51
Identity = 85/89 (95.51%), Postives = 87/89 (97.75%), Query Frame = 0


Query: 46  GPDTVESGQSVPVAAGAGDTNICGGIVQLYWERILGRSLDLNGQVRQVALKAIVSLWVGA 105
           GPDTVESGQSVPVAAGAGDTNICGGIVQLYWERILGRSLDLNGQV Q+ALKAIVSLWVGA
Sbjct: 291 GPDTVESGQSVPVAAGAGDTNICGGIVQLYWERILGRSLDLNGQVHQIALKAIVSLWVGA 350

Query: 106 VISSWCNFITVLYVGHFLLEDDDKFLDKV 134
           VISSWCNFI VLYVGHFLLE+DDKFLDKV
Sbjct: 351 VISSWCNFIIVLYVGHFLLEEDDKFLDKV 379

[Close]

BLAST of MELO.jh033252.1 vs. TAIR 10
Match: AT5G15540.1 (PHD finger family protein )

HSP 1 Score: 106.7 bits (265), Expect = 1.5e-23
Identity = 49/80 (61.25%), Postives = 64/80 (80.00%), Query Frame = 0


Query: 19   MQALQNMYDYVLDAEGQMGTDEAGDGAGPDTVESGQSVPVAAGAGDTNICGGIVQLYWER 78
            MQALQNMY+Y+LDAE Q+G+++A D       + G +VPVAAGAGDTNICGGIVQL+W++
Sbjct: 1339 MQALQNMYEYLLDAEKQLGSEKASDNTVNSVEQGGHNVPVAAGAGDTNICGGIVQLFWDK 1398

Query: 79   ILGRSLDLNGQVRQVALKAI 99
            ILGR LD + Q+RQ +LK +
Sbjct: 1399 ILGRCLDFDDQIRQTSLKIV 1418

[Close]

BLAST of MELO.jh033252.1 vs. TAIR 10
Match: AT5G15540.2 (PHD finger family protein )

HSP 1 Score: 106.7 bits (265), Expect = 1.5e-23
Identity = 49/80 (61.25%), Postives = 64/80 (80.00%), Query Frame = 0


Query: 19   MQALQNMYDYVLDAEGQMGTDEAGDGAGPDTVESGQSVPVAAGAGDTNICGGIVQLYWER 78
            MQALQNMY+Y+LDAE Q+G+++A D       + G +VPVAAGAGDTNICGGIVQL+W++
Sbjct: 1337 MQALQNMYEYLLDAEKQLGSEKASDNTVNSVEQGGHNVPVAAGAGDTNICGGIVQLFWDK 1396

Query: 79   ILGRSLDLNGQVRQVALKAI 99
            ILGR LD + Q+RQ +LK +
Sbjct: 1397 ILGRCLDFDDQIRQTSLKIV 1416

[Close]

BLAST of MELO.jh033252.1 vs. TAIR 10
Match: AT3G10260.1 (Reticulon family protein )

HSP 1 Score: 42.0 bits (97), Expect = 4.5e-04
Identity = 18/39 (46.15%), Postives = 27/39 (69.23%), Query Frame = 0


Query: 82  RSLDLNGQVRQVALKAIVSLWVGAVISSWCNFITVLYVG 121
           + L   G ++Q  L A++ LWV A++ S CNF+TVLY+G
Sbjct: 155 QDLACKGNLKQF-LMAVIGLWVAAMVGSCCNFLTVLYIG 192

[Close]

BLAST of MELO.jh033252.1 vs. TAIR 10
Match: AT3G10260.2 (Reticulon family protein )

HSP 1 Score: 42.0 bits (97), Expect = 4.5e-04
Identity = 18/39 (46.15%), Postives = 27/39 (69.23%), Query Frame = 0


Query: 82  RSLDLNGQVRQVALKAIVSLWVGAVISSWCNFITVLYVG 121
           + L   G ++Q  L A++ LWV A++ S CNF+TVLY+G
Sbjct: 155 QDLACKGNLKQF-LMAVIGLWVAAMVGSCCNFLTVLYIG 192

[Close]

BLAST of MELO.jh033252.1 vs. TAIR 10
Match: AT3G10260.3 (Reticulon family protein )

HSP 1 Score: 42.0 bits (97), Expect = 4.5e-04
Identity = 18/39 (46.15%), Postives = 27/39 (69.23%), Query Frame = 0


Query: 82  RSLDLNGQVRQVALKAIVSLWVGAVISSWCNFITVLYVG 121
           + L   G ++Q  L A++ LWV A++ S CNF+TVLY+G
Sbjct: 175 QDLACKGNLKQF-LMAVIGLWVAAMVGSCCNFLTVLYIG 212

The following BLAST results are available for this feature:

BLAST of MELO.jh033252.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0065067.1	3.28e-89	100.00	nipped-B-like protein isoform X3 [Cucumis melo var. makuwa]	[more]
KAA0058102.1	7.16e-72	97.41	nipped-B-like protein isoform X1 [Cucumis melo var. makuwa]	[more]
KAA0032422.1	2.27e-63	97.98	nipped-B-like protein isoform X3 [Cucumis melo var. makuwa] >TYK05630.1 nipped-B...	[more]
KAA0038966.1	3.38e-54	97.70	nipped-B-like protein isoform X3 [Cucumis melo var. makuwa]	[more]
KAA0039563.1	7.47e-51	95.51	protein transport protein SFT2-like [Cucumis melo var. makuwa]	[more]

BLAST of MELO.jh033252.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A5HEI1	2.1e-22	61.25	Sister chromatid cohesion protein SCC2 OS=Arabidopsis thaliana OX=3702 GN=SCC2 P...	[more]

BLAST of MELO.jh033252.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VDE2	1.59e-89	100.00	Nipped-B-like protein isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A5A7UQF8	3.47e-72	97.41	Nipped-B-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A5A7SMZ0	1.10e-63	97.98	Nipped-B-like protein isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A5A7TAA2	1.64e-54	97.70	Nipped-B-like protein isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A5A7T9C1	3.62e-51	95.51	Vesicle transport protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]

BLAST of MELO.jh033252.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G15540.1	1.5e-23	61.25	PHD finger family protein	[more]
AT5G15540.2	1.5e-23	61.25	PHD finger family protein	[more]
AT3G10260.1	4.5e-04	46.15	Reticulon family protein	[more]
AT3G10260.2	4.5e-04	46.15	Reticulon family protein	[more]
AT3G10260.3	4.5e-04	46.15	Reticulon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR21704:SF18	EXPRESSED PROTEIN-RELATED	coord: 18..101
IPR033031	Scc2/Nipped-B family	PANTHER	PTHR21704	NIPPED-B-LIKE PROTEIN DELANGIN SCC2-RELATED	coord: 18..101

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO.jh033252.1.t1	MELO.jh033252.1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0061780	mitotic cohesin loading
biological_process	GO:0010468	regulation of gene expression
molecular_function	GO:0003682	chromatin binding