MELO.jh033065.1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh033065.1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Retrotransposon protein
Location	chr01: 17718272 .. 17719597 (-)
RNA-Seq Expression	MELO.jh033065.1
Synteny	MELO.jh033065.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGAACAAACACTTATTGGAGTTCTAACTGCATTCACGTTGGCCCAACGTCAGATTTTACTAACGTTGGAGCTATTAATGAACAACAATAAGCGTCTCCCACATACACCGCCCGATACACGCCATAGAATTAGGGAGCTTGCTTACTTTCGCATGATACACGAGTCAGATCTTGTGTGTCGGCAAAGCACGCGGATGGATAGGCGAACATTCGCAATTCTATGCCATTTACTTAGAAATGTCGCTGGTCTTTCTTCAACTGAAATTGTCGATGTTGAGGAAATGGTAGCAATGTTCTTGCACGTCCTCGCTCATGACGTGAAGAACCGCGTCATACAACGAGAATTTGTACGCTCCGGTGAGACAGTATCGCGACATTTCAACATCGTATTGTTGGCTGTTCTTCGACTGTACGAGGAGTTGATAAAAAGACCTGTTCCGGTAACAAGTAACTGCAATGATCAACGTTGGAAGTGTTTCGAGGTGGGCATCCTACAAGTTCACTATAATTGACCTTTAGGTACATCGCAGTTAATTCATTGTGTTCCTTTCAACCTGCAGAACTGCCTTGGCGCGTTAGACGGGACGTACATAAAGGTGAACGTCCCCGCAGGAGATCGGCCTACTTTCAGAACGCGTAAGGGGGAAATTGCCACAAACGTTCTTGGGGTCTGTGACACGAAAGGGGATTTCGTCTATGTCCTCGCCGGTTGGGAAGGATCTGCAGCAGACTCGCGGATCCTACGTGATGCGATTTCACGAGAAAATGGACTACAAGTGCCAAAGGGTATATCATGTTTATAATAAAACACCGTCGCTTCTTACTTACCTATTTAAAGTTCATAAACAAACCATTTAATAACAGGATATTATTATCTGTGCGATGCTGGATATCCAAACGCGGAGGGGTTTCTCGCCCCGTACAGAGGCCAGCGGTACCATTTGCAAGAGTGGCGTGGTGCTGCAAATGCGCCAACAAATGCAAAGGAGTACTTCAACATGAAGCACTCCTCGGCAAGGAATGTTATTGAGCGCGCGTTCGGTGTTCTAAAGGGTCGTTGGGCCATTCTTCGTGGAAAGTCGTATTATCCCCTGCAAGTCCAGTGTCGCACCATTCTAGCATGTGCGTTGCTTCACAATTTGATCAACAGGGAAATGACATATTGCGACGACGTTGAGGACGAGGACGAGGGGGACTCCACGTACGCAACGACCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCAGTGGCGCGACAACCTAGCCGCATCGATGTTCACCGATTGGCAGTTCCGTAACGCTTAG

mRNA sequence

ATGGATGAACAAACACTTATTGGAGTTCTAACTGCATTCACGTTGGCCCAACGTCAGATTTTACTAACGTTGGAGCTATTAATGAACAACAATAAGCGTCTCCCACATACACCGCCCGATACACGCCATAGAATTAGGGAGCTTGCTTACTTTCGCATGATACACGAGTCAGATCTTGTGTGTCGGCAAAGCACGCGGATGGATAGGCGAACATTCGCAATTCTATGCCATTTACTTAGAAATGTCGCTGGTCTTTCTTCAACTGAAATTGTCGATGTTGAGGAAATGGTAGCAATGTTCTTGCACGTCCTCGCTCATGACGTGAAGAACCGCGTCATACAACGAGAATTTGTACGCTCCGGTGAGACAGTATCGCGACATTTCAACATCGTATTGTTGGCTGTTCTTCGACTGTACGAGGAGTTGATAAAAAGACCTGTTCCGGTAACAAGTAACTGCAATGATCAACGTTGGAAGGAAATGACATATTGCGACGACGTTGAGGACGAGGACGAGGGGGACTCCACGTACGCAACGACCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCAGTGGCGCGACAACCTAGCCGCATCGATGTTCACCGATTGGCAGTTCCGTAACGCTTAG

Coding sequence (CDS)

ATGGATGAACAAACACTTATTGGAGTTCTAACTGCATTCACGTTGGCCCAACGTCAGATTTTACTAACGTTGGAGCTATTAATGAACAACAATAAGCGTCTCCCACATACACCGCCCGATACACGCCATAGAATTAGGGAGCTTGCTTACTTTCGCATGATACACGAGTCAGATCTTGTGTGTCGGCAAAGCACGCGGATGGATAGGCGAACATTCGCAATTCTATGCCATTTACTTAGAAATGTCGCTGGTCTTTCTTCAACTGAAATTGTCGATGTTGAGGAAATGGTAGCAATGTTCTTGCACGTCCTCGCTCATGACGTGAAGAACCGCGTCATACAACGAGAATTTGTACGCTCCGGTGAGACAGTATCGCGACATTTCAACATCGTATTGTTGGCTGTTCTTCGACTGTACGAGGAGTTGATAAAAAGACCTGTTCCGGTAACAAGTAACTGCAATGATCAACGTTGGAAGGAAATGACATATTGCGACGACGTTGAGGACGAGGACGAGGGGGACTCCACGTACGCAACGACCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCAGTGGCGCGACAACCTAGCCGCATCGATGTTCACCGATTGGCAGTTCCGTAACGCTTAG

Protein sequence

MDEQTLIGVLTAFTLAQRQILLTLELLMNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCNDQRWKEMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFRNA

Homology

[Close]

BLAST of MELO.jh033065.1 vs. NCBI nr
Match: KAA0058874.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 351 bits (901), Expect = 1.77e-118
Identity = 210/368 (57.07%), Postives = 213/368 (57.88%), Query Frame = 0


Query: 1   MDEQTLIGVLTAFTLAQRQILLTLELLMNNNKRLPHTPPDTRHRIRELAYFRMIHESDLV 60
           MDEQTLIGVLTAFT AQRQILLTLELLMNNNKRLPHTPPDTRHRIRELAYFRMIHESDLV
Sbjct: 1   MDEQTLIGVLTAFTSAQRQILLTLELLMNNNKRLPHTPPDTRHRIRELAYFRMIHESDLV 60

Query: 61  CRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRS 120
           CRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRS
Sbjct: 61  CRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRS 120

Query: 121 GETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCNDQRWK--------------------- 180
           GETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCNDQRWK                     
Sbjct: 121 GETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCNDQRWKCFENCLGALDGTYIKVNVPAG 180

Query: 181 ------------------------------------------------------------ 215
                                                                       
Sbjct: 181 DRPTFRTRKGEIVTNVLGVCDTKGDFVYVLAGWEGSAADSRILRNAISRENGLQVPKGQW 240

[Close]

BLAST of MELO.jh033065.1 vs. NCBI nr
Match: KAA0036563.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 326 bits (835), Expect = 6.04e-109
Identity = 187/334 (55.99%), Postives = 201/334 (60.18%), Query Frame = 0


Query: 1   MDEQTLIGVLTAFTLAQRQILLTLELLMNNNKRLPHTPPDTRHRIRELAYFRMIHESDLV 60
           MD+QT++G+ T FTLAQRQILLTLELLMN+NKR+ +TP DTRHRIR+LAYFRMIHESDLV
Sbjct: 1   MDQQTVLGIPTVFTLAQRQILLTLELLMNDNKRITYTPSDTRHRIRQLAYFRMIHESDLV 60

Query: 61  CRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRS 120
           CRQSTRMDRRTFAILCHLLR V+ LSSTEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRS
Sbjct: 61  CRQSTRMDRRTFAILCHLLRTVSSLSSTEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRS 120

Query: 121 GETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCNDQRWK--------------------- 180
           GETVS HFN+VLLAV+RLYE+LIKRPVPVT+NCNDQRWK                     
Sbjct: 121 GETVSLHFNLVLLAVVRLYEKLIKRPVPVTNNCNDQRWKCFEKCLSALDGTYIKVNVPAT 180

Query: 181 ------------------------------------------------------------ 215
                                                                       
Sbjct: 181 DRPTFRTRSAADSRILRDALSRENGLQVPKGYYYLYDAGYQNAEGFLVTTPRQGMSLSAP 240

[Close]

BLAST of MELO.jh033065.1 vs. NCBI nr
Match: TYK19044.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa])

HSP 1 Score: 319 bits (818), Expect = 4.63e-107
Identity = 181/286 (63.29%), Postives = 193/286 (67.48%), Query Frame = 0


Query: 1   MDEQTLIGVLTAFTLAQRQILLTLELLMNNNKRLPHTPPDTRHRIRELAYFRMIHESDLV 60
           MD+QTL+GVLTAFTLAQRQ+LLTLELLMNNNKRLPHTP DTRHRIR+LAYF MIHESDLV
Sbjct: 1   MDQQTLLGVLTAFTLAQRQMLLTLELLMNNNKRLPHTPSDTRHRIRQLAYFHMIHESDLV 60

Query: 61  CRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRS 120
           CRQST MD RTF ILCHLLRNVAGLSSTEIV+VEEMVAMFLHVLAHDV NR IQREFVRS
Sbjct: 61  CRQSTHMDMRTFVILCHLLRNVAGLSSTEIVNVEEMVAMFLHVLAHDVTNRAIQREFVRS 120

Query: 121 GETVSRHFNIVLLAVLRLYEELIKRPV--------------------------------- 180
           GETVS HFN+VLLAV+RLYEELIKRPV                                 
Sbjct: 121 GETVSLHFNLVLLAVVRLYEELIKRPVLGFLTPYRGQRYHLQEWRGAGNAPINAKEYFNM 180

Query: 181 -----------------------------PVTSNC---------NDQRWKEMTYCDDVED 215
                                        P+   C         ++   +EMTYCDDV D
Sbjct: 181 KHSSARNVIERAFGVFKGHWAILHGKSYYPLQVQCRTILACCLLHNLINREMTYCDDVYD 240

[Close]

BLAST of MELO.jh033065.1 vs. NCBI nr
Match: KAA0032340.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa])

HSP 1 Score: 315 bits (806), Expect = 4.95e-105
Identity = 183/303 (60.40%), Postives = 193/303 (63.70%), Query Frame = 0


Query: 1   MDEQTLIGVLTAFTLAQRQILLTLELLMNNNKRLPHTPPDTRHRIRELAYFRMIHESDLV 60
           MD+QTL+GVLTAFTLAQRQ+LLTLELLMNNNKRLPHTP DTRHRIR+LAYF MIHESDLV
Sbjct: 1   MDQQTLLGVLTAFTLAQRQMLLTLELLMNNNKRLPHTPSDTRHRIRQLAYFHMIHESDLV 60

Query: 61  CRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRS 120
           CRQST MD RTF ILCHLLRNVAGLSSTEIV+VEEMVAMFLHVLAHDV NR IQREFVRS
Sbjct: 61  CRQSTHMDMRTFVILCHLLRNVAGLSSTEIVNVEEMVAMFLHVLAHDVTNRAIQREFVRS 120

Query: 121 GETVSRHFNIVLLAVLRLYEELIKRPVPVTSNC-----------------------NDQR 180
           GETVS HFN+VLLAV+RLYEELIKRPV    NC                       + Q 
Sbjct: 121 GETVSLHFNLVLLAVVRLYEELIKRPV---LNCLGALHRTYIKVNGFLTPYRGQRYHLQE 180

Query: 181 WK---------------------------------------------------------- 215
           W+                                                          
Sbjct: 181 WRGAGNAPINAKEYFNMKHSSARNVIERAFGVFKGHWAILHGKSYYPLQVQCRTILACCL 240

[Close]

BLAST of MELO.jh033065.1 vs. NCBI nr
Match: KAA0025501.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK00363.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 314 bits (804), Expect = 7.12e-105
Identity = 175/290 (60.34%), Postives = 183/290 (63.10%), Query Frame = 0


Query: 28  MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS 87
           MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMD+ TFAILCHLLRNVAGLSS
Sbjct: 1   MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDKLTFAILCHLLRNVAGLSS 60

Query: 88  TEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV 147
           TEIVDVEEMVAMFLHVLAHD+KNRVIQREFVRSGETVSRHFNI+LL VLRLYEELIKRPV
Sbjct: 61  TEIVDVEEMVAMFLHVLAHDMKNRVIQREFVRSGETVSRHFNIILLVVLRLYEELIKRPV 120

Query: 148 PVTSNCNDQRWK------------------------------------------------ 207
           PVTSNCNDQRWK                                                
Sbjct: 121 PVTSNCNDQRWKCFENCLGALDRTYIKVNVPAGDRPTFRTRKGEIAIYVLGVCDTKGDFA 180

Query: 208 ------------------------------------------------------EMTYCD 215
                                                                 EM YC+
Sbjct: 181 YVLAGWEGSAADSRILRDVLSRENGLQVQKGYYYLCDAGYPNAEGFLDPYRGQREMIYCE 240

[Close]

BLAST of MELO.jh033065.1 vs. ExPASy TrEMBL
Match: A0A5A7UUT3 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold98G00380 PE=3 SV=1)

HSP 1 Score: 351 bits (901), Expect = 8.58e-119
Identity = 210/368 (57.07%), Postives = 213/368 (57.88%), Query Frame = 0


Query: 1   MDEQTLIGVLTAFTLAQRQILLTLELLMNNNKRLPHTPPDTRHRIRELAYFRMIHESDLV 60
           MDEQTLIGVLTAFT AQRQILLTLELLMNNNKRLPHTPPDTRHRIRELAYFRMIHESDLV
Sbjct: 1   MDEQTLIGVLTAFTSAQRQILLTLELLMNNNKRLPHTPPDTRHRIRELAYFRMIHESDLV 60

Query: 61  CRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRS 120
           CRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRS
Sbjct: 61  CRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRS 120

Query: 121 GETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCNDQRWK--------------------- 180
           GETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCNDQRWK                     
Sbjct: 121 GETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCNDQRWKCFENCLGALDGTYIKVNVPAG 180

Query: 181 ------------------------------------------------------------ 215
                                                                       
Sbjct: 181 DRPTFRTRKGEIVTNVLGVCDTKGDFVYVLAGWEGSAADSRILRNAISRENGLQVPKGQW 240

[Close]

BLAST of MELO.jh033065.1 vs. ExPASy TrEMBL
Match: A0A5A7T0Z8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold191G00710 PE=4 SV=1)

HSP 1 Score: 326 bits (835), Expect = 2.93e-109
Identity = 187/334 (55.99%), Postives = 201/334 (60.18%), Query Frame = 0


Query: 1   MDEQTLIGVLTAFTLAQRQILLTLELLMNNNKRLPHTPPDTRHRIRELAYFRMIHESDLV 60
           MD+QT++G+ T FTLAQRQILLTLELLMN+NKR+ +TP DTRHRIR+LAYFRMIHESDLV
Sbjct: 1   MDQQTVLGIPTVFTLAQRQILLTLELLMNDNKRITYTPSDTRHRIRQLAYFRMIHESDLV 60

Query: 61  CRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRS 120
           CRQSTRMDRRTFAILCHLLR V+ LSSTEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRS
Sbjct: 61  CRQSTRMDRRTFAILCHLLRTVSSLSSTEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRS 120

Query: 121 GETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCNDQRWK--------------------- 180
           GETVS HFN+VLLAV+RLYE+LIKRPVPVT+NCNDQRWK                     
Sbjct: 121 GETVSLHFNLVLLAVVRLYEKLIKRPVPVTNNCNDQRWKCFEKCLSALDGTYIKVNVPAT 180

Query: 181 ------------------------------------------------------------ 215
                                                                       
Sbjct: 181 DRPTFRTRSAADSRILRDALSRENGLQVPKGYYYLYDAGYQNAEGFLVTTPRQGMSLSAP 240

[Close]

BLAST of MELO.jh033065.1 vs. ExPASy TrEMBL
Match: A0A5D3D656 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold6384G00040 PE=3 SV=1)

HSP 1 Score: 319 bits (818), Expect = 2.24e-107
Identity = 181/286 (63.29%), Postives = 193/286 (67.48%), Query Frame = 0


Query: 1   MDEQTLIGVLTAFTLAQRQILLTLELLMNNNKRLPHTPPDTRHRIRELAYFRMIHESDLV 60
           MD+QTL+GVLTAFTLAQRQ+LLTLELLMNNNKRLPHTP DTRHRIR+LAYF MIHESDLV
Sbjct: 1   MDQQTLLGVLTAFTLAQRQMLLTLELLMNNNKRLPHTPSDTRHRIRQLAYFHMIHESDLV 60

Query: 61  CRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRS 120
           CRQST MD RTF ILCHLLRNVAGLSSTEIV+VEEMVAMFLHVLAHDV NR IQREFVRS
Sbjct: 61  CRQSTHMDMRTFVILCHLLRNVAGLSSTEIVNVEEMVAMFLHVLAHDVTNRAIQREFVRS 120

Query: 121 GETVSRHFNIVLLAVLRLYEELIKRPV--------------------------------- 180
           GETVS HFN+VLLAV+RLYEELIKRPV                                 
Sbjct: 121 GETVSLHFNLVLLAVVRLYEELIKRPVLGFLTPYRGQRYHLQEWRGAGNAPINAKEYFNM 180

Query: 181 -----------------------------PVTSNC---------NDQRWKEMTYCDDVED 215
                                        P+   C         ++   +EMTYCDDV D
Sbjct: 181 KHSSARNVIERAFGVFKGHWAILHGKSYYPLQVQCRTILACCLLHNLINREMTYCDDVYD 240

[Close]

BLAST of MELO.jh033065.1 vs. ExPASy TrEMBL
Match: A0A5A7SNH9 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G001990 PE=3 SV=1)

HSP 1 Score: 315 bits (806), Expect = 2.39e-105
Identity = 183/303 (60.40%), Postives = 193/303 (63.70%), Query Frame = 0


Query: 1   MDEQTLIGVLTAFTLAQRQILLTLELLMNNNKRLPHTPPDTRHRIRELAYFRMIHESDLV 60
           MD+QTL+GVLTAFTLAQRQ+LLTLELLMNNNKRLPHTP DTRHRIR+LAYF MIHESDLV
Sbjct: 1   MDQQTLLGVLTAFTLAQRQMLLTLELLMNNNKRLPHTPSDTRHRIRQLAYFHMIHESDLV 60

Query: 61  CRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRS 120
           CRQST MD RTF ILCHLLRNVAGLSSTEIV+VEEMVAMFLHVLAHDV NR IQREFVRS
Sbjct: 61  CRQSTHMDMRTFVILCHLLRNVAGLSSTEIVNVEEMVAMFLHVLAHDVTNRAIQREFVRS 120

Query: 121 GETVSRHFNIVLLAVLRLYEELIKRPVPVTSNC-----------------------NDQR 180
           GETVS HFN+VLLAV+RLYEELIKRPV    NC                       + Q 
Sbjct: 121 GETVSLHFNLVLLAVVRLYEELIKRPV---LNCLGALHRTYIKVNGFLTPYRGQRYHLQE 180

Query: 181 WK---------------------------------------------------------- 215
           W+                                                          
Sbjct: 181 WRGAGNAPINAKEYFNMKHSSARNVIERAFGVFKGHWAILHGKSYYPLQVQCRTILACCL 240

[Close]

BLAST of MELO.jh033065.1 vs. ExPASy TrEMBL
Match: A0A5D3BKS9 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1112G00270 PE=3 SV=1)

HSP 1 Score: 314 bits (804), Expect = 3.45e-105
Identity = 175/290 (60.34%), Postives = 183/290 (63.10%), Query Frame = 0


Query: 28  MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS 87
           MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMD+ TFAILCHLLRNVAGLSS
Sbjct: 1   MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDKLTFAILCHLLRNVAGLSS 60

Query: 88  TEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV 147
           TEIVDVEEMVAMFLHVLAHD+KNRVIQREFVRSGETVSRHFNI+LL VLRLYEELIKRPV
Sbjct: 61  TEIVDVEEMVAMFLHVLAHDMKNRVIQREFVRSGETVSRHFNIILLVVLRLYEELIKRPV 120

Query: 148 PVTSNCNDQRWK------------------------------------------------ 207
           PVTSNCNDQRWK                                                
Sbjct: 121 PVTSNCNDQRWKCFENCLGALDRTYIKVNVPAGDRPTFRTRKGEIAIYVLGVCDTKGDFA 180

Query: 208 ------------------------------------------------------EMTYCD 215
                                                                 EM YC+
Sbjct: 181 YVLAGWEGSAADSRILRDVLSRENGLQVQKGYYYLCDAGYPNAEGFLDPYRGQREMIYCE 240

[Close]

BLAST of MELO.jh033065.1 vs. TAIR 10
Match: AT5G41980.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 67.0 bits (162), Expect = 2.1e-11
Identity = 32/94 (34.04%), Postives = 58/94 (61.70%), Query Frame = 0


Query: 51  FRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKN 110
           +++++  +  C ++ RMD+  F  LC LL+    L  T  + +E  +A+FL ++ H+++ 
Sbjct: 32  YQILNGPNEQCFENFRMDKPVFYKLCDLLQTRGLLRHTNRIKIEAQLAIFLFIIGHNLRT 91

Query: 111 RVIQREFVRSGETVSRHFNIVLLAVLRLYEELIK 145
           R +Q  F  SGET+SRHFN VL AV+ + ++  +
Sbjct: 92  RAVQELFCYSGETISRHFNNVLNAVIAISKDFFQ 125

[Close]

BLAST of MELO.jh033065.1 vs. TAIR 10
Match: AT5G28730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 496 Blast hits to 496 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 23; Plants - 470; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 52.4 bits (124), Expect = 5.3e-07
Identity = 31/91 (34.07%), Postives = 49/91 (53.85%), Query Frame = 0


Query: 54  IHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRVI 113
           I+ +++ C+   RM    F  LC +L    GL S+  + ++E VA+FL + A +   R I
Sbjct: 17  IYSNEVSCQTLIRMSSEAFTQLCEILHGKYGLQSSTNISLDESVAIFLIICASNDTQRDI 76

Query: 114 QREFVRSGETVSRHFNIVLLAVLRLYEELIK 145
              F  + ET+ R F+ VL A+ RL  E I+
Sbjct: 77  ALRFGHAQETIWRKFHDVLKAMERLAVEYIR 107

The following BLAST results are available for this feature:

BLAST of MELO.jh033065.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0058874.1	1.77e-118	57.07	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0036563.1	6.04e-109	55.99	retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK19044.1	4.63e-107	63.29	putative nuclease HARBI1 [Cucumis melo var. makuwa]	[more]
KAA0032340.1	4.95e-105	60.40	putative nuclease HARBI1 [Cucumis melo var. makuwa]	[more]
KAA0025501.1	7.12e-105	60.34	retrotransposon protein [Cucumis melo var. makuwa] >TYK00363.1 retrotransposon p...	[more]

BLAST of MELO.jh033065.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO.jh033065.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UUT3	8.58e-119	57.07	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7T0Z8	2.93e-109	55.99	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3D656	2.24e-107	63.29	Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A5A7SNH9	2.39e-105	60.40	Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A5D3BKS9	3.45e-105	60.34	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of MELO.jh033065.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G41980.1	2.1e-11	34.04	CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int...	[more]
AT5G28730.1	5.3e-07	34.07	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR22930	UNCHARACTERIZED	coord: 38..160
None	No IPR available	PANTHER	PTHR22930:SF216	OS11G0577650 PROTEIN	coord: 38..160

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO.jh033065.1.t1	MELO.jh033065.1.t1	mRNA