MELO.jh032196.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh032196.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr11: 10212964 .. 10213473 (+)
RNA-Seq ExpressionMELO.jh032196.1
SyntenyMELO.jh032196.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGGTCGACCTAGAATTAAAGACTATGGCCCTGAGTTTCAGACTATTTCCCTGCTTCTAGTGGGTTCAGCTCCTCACTCTTTGATGTTCCTGTTCCCCCGACTAGTTTGTTACTTCTTACCTCCACTATCTTGGGTTCTTCAAGTGCTTTCTGATGAGTCACGTGCGCTTGCTAGTACTATAAGAGATTTATCTGCCCATCGGTTTGCTATGGATTCATTACTAAAAGATCTTCAACAGTTGGTGTTGTCTGCTTCTGCTACTTCTTTTGTGCCTCATTCCTAGCTTTATTTGTCAAGAAAGAAGGGAGAGTATATATTTGAAACTGTAATGGGTTATTTTGTTGGTTGGTTCTGCTCTTGTGAATGGTATTTAAATATGGATTTGTTTTGTTATTTTGATTATTTTGTTGGTTCTAGATCTGTTTTTTTTTATATGGCTATTGGTGATCTACTCTTCCTGTGACTACTGATTTGAAATTCAATATATATCTCTTGGTCGTTTATGGTTA

mRNA sequence

GTGGTCGACCTAGAATTAAAGACTATGGCCCTGAGTTTCAGACTATTTCCCTGCTTCTAGTGGGTTCAGCTCCTCACTCTTTGATGTTCCTGTTCCCCCGACTAGTTTGTTACTTCTTACCTCCACTATCTTGGGTTCTTCAAGTGCTTTCTGATGAGTCACGTGCGCTTGCTAGTACTATAAGAGATTTATCTGCCCATCGGTTTGCTATGGATTCATTACTAAAAGATCTTCAACAGTTGGTGTTGTCTGCTTCTGCTACTTCTTTTGTGCCTCATTCCTAGCTTTATTTGTCAAGAAAGAAGGGAGAGTATATATTTGAAACTGTAATGGGTTATTTTGTTGGTTGGTTCTGCTCTTGTGAATGGTATTTAAATATGGATTTGTTTTGTTATTTTGATTATTTTGTTGGTTCTAGATCTGTTTTTTTTTATATGGCTATTGGTGATCTACTCTTCCTGTGACTACTGATTTGAAATTCAATATATATCTCTTGGTCGTTTATGGTTA

Coding sequence (CDS)

ATGTTCCTGTTCCCCCGACTAGTTTGTTACTTCTTACCTCCACTATCTTGGGTTCTTCAAGTGCTTTCTGATGAGTCACGTGCGCTTGCTAGTACTATAAGAGATTTATCTGCCCATCGGTTTGCTATGGATTCATTACTAAAAGATCTTCAACAGTTGGTGTTGTCTGCTTCTGCTACTTCTTTTGTGCCTCATTCCTAG

Protein sequence

MFLFPRLVCYFLPPLSWVLQVLSDESRALASTIRDLSAHRFAMDSLLKDLQQLVLSASATSFVPHS
Homology
BLAST of MELO.jh032196.1 vs. NCBI nr
Match: TYJ98375.1 (hypothetical protein E5676_scaffold232G001120 [Cucumis melo var. makuwa])

HSP 1 Score: 54.3 bits (129), Expect = 2.29e-07
Identity = 28/45 (62.22%), Postives = 36/45 (80.00%), Query Frame = 0

Query: 16  SWVLQVLSDESRALASTIRDLSAHRFAMDSLLKDLQQLVLSASAT 60
           S VLQ+L+ ESR LAS +RDLSAH+ A+DSLL++LQ LV S  A+
Sbjct: 62  SRVLQILTKESRVLASVVRDLSAHKSAVDSLLQELQWLVFSTFAS 106

BLAST of MELO.jh032196.1 vs. NCBI nr
Match: KAA0032495.1 (hypothetical protein E6C27_scaffold465G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 53.5 bits (127), Expect = 8.82e-07
Identity = 27/45 (60.00%), Postives = 36/45 (80.00%), Query Frame = 0

Query: 16  SWVLQVLSDESRALASTIRDLSAHRFAMDSLLKDLQQLVLSASAT 60
           S +LQ+L+ ESR LAS +RDLSAH+ A+DSLL++LQ LV S  A+
Sbjct: 96  SRLLQILTKESRVLASVVRDLSAHKSAVDSLLQELQYLVFSTFAS 140

BLAST of MELO.jh032196.1 vs. NCBI nr
Match: KAA0046488.1 (uncharacterized protein E6C27_scaffold543G00710 [Cucumis melo var. makuwa])

HSP 1 Score: 47.0 bits (110), Expect = 5.02e-04
Identity = 25/42 (59.52%), Postives = 32/42 (76.19%), Query Frame = 0

Query: 18  VLQVLSDESRALASTIRDLSAHRFAMDSLLKDLQQLVLSASA 59
           VLQVL +ES+ L STIRDLS H+ A+D++L+DL  LV S  A
Sbjct: 149 VLQVLIEESKMLTSTIRDLSTHKNAVDAVLQDLLHLVPSTLA 190

BLAST of MELO.jh032196.1 vs. NCBI nr
Match: TYJ97724.1 (uncharacterized protein E5676_scaffold1251G00220 [Cucumis melo var. makuwa])

HSP 1 Score: 47.0 bits (110), Expect = 5.02e-04
Identity = 25/42 (59.52%), Postives = 32/42 (76.19%), Query Frame = 0

Query: 18  VLQVLSDESRALASTIRDLSAHRFAMDSLLKDLQQLVLSASA 59
           VLQVL +ES+ L STIRDLS H+ A+D++L+DL  LV S  A
Sbjct: 149 VLQVLIEESKMLTSTIRDLSTHKNAVDAVLQDLLHLVPSTLA 190

BLAST of MELO.jh032196.1 vs. ExPASy TrEMBL
Match: A0A5D3BJ30 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold232G001120 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.11e-07
Identity = 28/45 (62.22%), Postives = 36/45 (80.00%), Query Frame = 0

Query: 16  SWVLQVLSDESRALASTIRDLSAHRFAMDSLLKDLQQLVLSASAT 60
           S VLQ+L+ ESR LAS +RDLSAH+ A+DSLL++LQ LV S  A+
Sbjct: 62  SRVLQILTKESRVLASVVRDLSAHKSAVDSLLQELQWLVFSTFAS 106

BLAST of MELO.jh032196.1 vs. ExPASy TrEMBL
Match: A0A5A7STF3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold465G00010 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 4.27e-07
Identity = 27/45 (60.00%), Postives = 36/45 (80.00%), Query Frame = 0

Query: 16  SWVLQVLSDESRALASTIRDLSAHRFAMDSLLKDLQQLVLSASAT 60
           S +LQ+L+ ESR LAS +RDLSAH+ A+DSLL++LQ LV S  A+
Sbjct: 96  SRLLQILTKESRVLASVVRDLSAHKSAVDSLLQELQYLVFSTFAS 140

BLAST of MELO.jh032196.1 vs. ExPASy TrEMBL
Match: A0A5D3BF79 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G00220 PE=4 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 2.43e-04
Identity = 25/42 (59.52%), Postives = 32/42 (76.19%), Query Frame = 0

Query: 18  VLQVLSDESRALASTIRDLSAHRFAMDSLLKDLQQLVLSASA 59
           VLQVL +ES+ L STIRDLS H+ A+D++L+DL  LV S  A
Sbjct: 149 VLQVLIEESKMLTSTIRDLSTHKNAVDAVLQDLLHLVPSTLA 190

BLAST of MELO.jh032196.1 vs. ExPASy TrEMBL
Match: A0A5A7TUG5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold543G00710 PE=4 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 2.43e-04
Identity = 25/42 (59.52%), Postives = 32/42 (76.19%), Query Frame = 0

Query: 18  VLQVLSDESRALASTIRDLSAHRFAMDSLLKDLQQLVLSASA 59
           VLQVL +ES+ L STIRDLS H+ A+D++L+DL  LV S  A
Sbjct: 149 VLQVLIEESKMLTSTIRDLSTHKNAVDAVLQDLLHLVPSTLA 190

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TYJ98375.12.29e-0762.22hypothetical protein E5676_scaffold232G001120 [Cucumis melo var. makuwa][more]
KAA0032495.18.82e-0760.00hypothetical protein E6C27_scaffold465G00010 [Cucumis melo var. makuwa][more]
KAA0046488.15.02e-0459.52uncharacterized protein E6C27_scaffold543G00710 [Cucumis melo var. makuwa][more]
TYJ97724.15.02e-0459.52uncharacterized protein E5676_scaffold1251G00220 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BJ301.11e-0762.22Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7STF34.27e-0760.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BF792.43e-0459.52Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7TUG52.43e-0459.52Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh032196.1.t1MELO.jh032196.1.t1mRNA