MELO.jh031952.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh031952.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr10: 2254599 .. 2255149 (+)
RNA-Seq ExpressionMELO.jh031952.1
SyntenyMELO.jh031952.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
CCTTAACAATTTTTCAACCAAAAAATTCATACCCAGAATCCCTCCTGTTCTCTACTTCCTAAAAAACGTTTCTTTTCTTCTTCAAGGTCAAACAAATATGGGAGACAAGAAAGAGAATTTGTTTTGGTCAATTATAAAGTCTTTCATTAATTGCTTACTTGGCTTCAATGCTGACGCATCCAAAGCTGCAGCATCTCCATCGGGGCCAGAGGCCGCCATGGTGGCCGCAGCAAAGCATTTCTCTTCTGCTCACAAGGTTCTGTTCAGCTAGTTAAGTGTTCATTTATAAGTCCATGAAGCCGATGTCTACTACTCCATACATGCTTGAGCAAGACACGGTCCTCTGCAGCTTAACTAACATCCATCAGTTCTCAATTTCATCACGTGTCAAAAGTTACTAGTAATAATTTGGGTACCTGAAATCTTGGCTTGACTTGGTTGCCAAGCATGAAAGGCGCAGGTCATCAAGTTATGTAATGTCAAATACCCCCTGTTAAAACATGTATTATTTCAAGATTGTCAACAATTCAATATAAAGTCACAGTTATATA

mRNA sequence

CCTTAACAATTTTTCAACCAAAAAATTCATACCCAGAATCCCTCCTGTTCTCTACTTCCTAAAAAACGTTTCTTTTCTTCTTCAAGGTCAAACAAATATGGGAGACAAGAAAGAGAATTTGTTTTGGTCAATTATAAAGTCTTTCATTAATTGCTTACTTGGCTTCAATGCTGACGCATCCAAAGCTGCAGCATCTCCATCGGGGCCAGAGGCCGCCATGGTGGCCGCAGCAAAGCATTTCTCTTCTGCTCACAAGGTTCTGTTCAGCTAGTTAAGTGTTCATTTATAAGTCCATGAAGCCGATGTCTACTACTCCATACATGCTTGAGCAAGACACGGTCCTCTGCAGCTTAACTAACATCCATCAGTTCTCAATTTCATCACGTGTCAAAAGTTACTAGTAATAATTTGGGTACCTGAAATCTTGGCTTGACTTGGTTGCCAAGCATGAAAGGCGCAGGTCATCAAGTTATGTAATGTCAAATACCCCCTGTTAAAACATGTATTATTTCAAGATTGTCAACAATTCAATATAAAGTCACAGTTATATA

Coding sequence (CDS)

ATGGGAGACAAGAAAGAGAATTTGTTTTGGTCAATTATAAAGTCTTTCATTAATTGCTTACTTGGCTTCAATGCTGACGCATCCAAAGCTGCAGCATCTCCATCGGGGCCAGAGGCCGCCATGGTGGCCGCAGCAAAGCATTTCTCTTCTGCTCACAAGGTTCTGTTCAGCTAG

Protein sequence

MGDKKENLFWSIIKSFINCLLGFNADASKAAASPSGPEAAMVAAAKHFSSAHKVLFS
Homology
BLAST of MELO.jh031952.1 vs. NCBI nr
Match: KGN51999.1 (hypothetical protein Csa_008139 [Cucumis sativus])

HSP 1 Score: 88.6 bits (218), Expect = 2.62e-21
Identity = 48/56 (85.71%), Postives = 49/56 (87.50%), Query Frame = 0

Query: 1  MGDKKENLFWSIIKSFINCLLGFN---ADASKAAASPSGPEAAMVAAAKHFSSAHK 53
          MGD+KENL WSIIKSFINCLLG N   ADAS AA SPSGPEAAMVAAAKHFSSAHK
Sbjct: 1  MGDEKENLCWSIIKSFINCLLGLNDGNADASNAAVSPSGPEAAMVAAAKHFSSAHK 56

BLAST of MELO.jh031952.1 vs. NCBI nr
Match: KAG6574028.1 (hypothetical protein SDJN03_27915, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 63.5 bits (153), Expect = 1.73e-11
Identity = 39/57 (68.42%), Postives = 43/57 (75.44%), Query Frame = 0

Query: 7  NLFWSIIKSFINCLLGFN------ADASKAAASPS---GPEAAMVAAAKHFSSAHKV 54
          NL WS +KSFI CLLGFN      A A+ AAA+PS   GPEAAMVAAAKHFSSAHK+
Sbjct: 2  NLIWSTLKSFIYCLLGFNGGSPEAAMAAAAAAAPSPPTGPEAAMVAAAKHFSSAHKL 58

BLAST of MELO.jh031952.1 vs. NCBI nr
Match: OIW16809.1 (hypothetical protein TanjilG_28520 [Lupinus angustifolius])

HSP 1 Score: 53.1 bits (126), Expect = 1.42e-07
Identity = 32/59 (54.24%), Postives = 39/59 (66.10%), Query Frame = 0

Query: 1  MGDK--KENLFWSIIKSFINCLLGFNADASKAAASPSGPEAAMVAAAKHFSSAHKVLFS 57
          MGDK  K++ F  I++SF +   G     S  A+  SGPEA MVAAAKHFSSAHKV F+
Sbjct: 1  MGDKGNKKSWFSDILRSFTSLFCGKGVKTSTKASVASGPEATMVAAAKHFSSAHKVKFN 59

BLAST of MELO.jh031952.1 vs. NCBI nr
Match: KAE9615455.1 (hypothetical protein Lalb_Chr04g0255411 [Lupinus albus])

HSP 1 Score: 52.8 bits (125), Expect = 2.01e-07
Identity = 32/59 (54.24%), Postives = 40/59 (67.80%), Query Frame = 0

Query: 1  MGDK--KENLFWSIIKSFINCLLGFNADASKAAASPSGPEAAMVAAAKHFSSAHKVLFS 57
          MG K  K+N F  I++SF +   G +   S  A++PS PEA MVAAAKHFSSAHKV F+
Sbjct: 1  MGYKGNKKNWFLHILRSFTSLFCGKDVKTSTKASAPSVPEATMVAAAKHFSSAHKVKFN 59

BLAST of MELO.jh031952.1 vs. NCBI nr
Match: KYP49918.1 (hypothetical protein KK1_028309 [Cajanus cajan])

HSP 1 Score: 51.2 bits (121), Expect = 8.19e-07
Identity = 26/54 (48.15%), Postives = 34/54 (62.96%), Query Frame = 0

Query: 3  DKKENLFWSIIKSFINCLLGFNADASKAAASPSGPEAAMVAAAKHFSSAHKVLF 56
          DKK +  +S +KS   C+ G    +   +A+P GP A MVAA+KHFSS HKV F
Sbjct: 5  DKKNSSLFSRVKSLAGCIFGGKVKSKSESAAPGGPVATMVAASKHFSSPHKVQF 58

BLAST of MELO.jh031952.1 vs. ExPASy TrEMBL
Match: A0A0A0KT12 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G606890 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.27e-21
Identity = 48/56 (85.71%), Postives = 49/56 (87.50%), Query Frame = 0

Query: 1  MGDKKENLFWSIIKSFINCLLGFN---ADASKAAASPSGPEAAMVAAAKHFSSAHK 53
          MGD+KENL WSIIKSFINCLLG N   ADAS AA SPSGPEAAMVAAAKHFSSAHK
Sbjct: 1  MGDEKENLCWSIIKSFINCLLGLNDGNADASNAAVSPSGPEAAMVAAAKHFSSAHK 56

BLAST of MELO.jh031952.1 vs. ExPASy TrEMBL
Match: A0A1J7HVT5 (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_28520 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 6.86e-08
Identity = 32/59 (54.24%), Postives = 39/59 (66.10%), Query Frame = 0

Query: 1  MGDK--KENLFWSIIKSFINCLLGFNADASKAAASPSGPEAAMVAAAKHFSSAHKVLFS 57
          MGDK  K++ F  I++SF +   G     S  A+  SGPEA MVAAAKHFSSAHKV F+
Sbjct: 1  MGDKGNKKSWFSDILRSFTSLFCGKGVKTSTKASVASGPEATMVAAAKHFSSAHKVKFN 59

BLAST of MELO.jh031952.1 vs. ExPASy TrEMBL
Match: A0A6A4QLI0 (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lalb_Chr04g0255411 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 9.75e-08
Identity = 32/59 (54.24%), Postives = 40/59 (67.80%), Query Frame = 0

Query: 1  MGDK--KENLFWSIIKSFINCLLGFNADASKAAASPSGPEAAMVAAAKHFSSAHKVLFS 57
          MG K  K+N F  I++SF +   G +   S  A++PS PEA MVAAAKHFSSAHKV F+
Sbjct: 1  MGYKGNKKNWFLHILRSFTSLFCGKDVKTSTKASAPSVPEATMVAAAKHFSSAHKVKFN 59

BLAST of MELO.jh031952.1 vs. ExPASy TrEMBL
Match: A0A151S583 (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_028309 PE=4 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 3.96e-07
Identity = 26/54 (48.15%), Postives = 34/54 (62.96%), Query Frame = 0

Query: 3  DKKENLFWSIIKSFINCLLGFNADASKAAASPSGPEAAMVAAAKHFSSAHKVLF 56
          DKK +  +S +KS   C+ G    +   +A+P GP A MVAA+KHFSS HKV F
Sbjct: 5  DKKNSSLFSRVKSLAGCIFGGKVKSKSESAAPGGPVATMVAASKHFSSPHKVQF 58

BLAST of MELO.jh031952.1 vs. ExPASy TrEMBL
Match: A0A6A5M9S6 (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00020923 PE=4 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 7.96e-07
Identity = 31/56 (55.36%), Postives = 38/56 (67.86%), Query Frame = 0

Query: 1  MGDK--KENLFWSIIKSFINCLLGFNADASKAAASPSGPEAAMVAAAKHFSSAHKV 54
          MG K  K+N F  I++SF +   G +   S  A++PS PEA MVAAAKHFSSAHKV
Sbjct: 1  MGYKGNKKNWFLHILRSFTSLFCGKDVKTSTKASAPSVPEATMVAAAKHFSSAHKV 56

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN51999.12.62e-2185.71hypothetical protein Csa_008139 [Cucumis sativus][more]
KAG6574028.11.73e-1168.42hypothetical protein SDJN03_27915, partial [Cucurbita argyrosperma subsp. sorori... [more]
OIW16809.11.42e-0754.24hypothetical protein TanjilG_28520 [Lupinus angustifolius][more]
KAE9615455.12.01e-0754.24hypothetical protein Lalb_Chr04g0255411 [Lupinus albus][more]
KYP49918.18.19e-0748.15hypothetical protein KK1_028309 [Cajanus cajan][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KT121.27e-2185.71Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G606890 PE=4 SV=1[more]
A0A1J7HVT56.86e-0854.24Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_28520 PE=4 S... [more]
A0A6A4QLI09.75e-0854.24Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lalb_Chr04g0255411 PE=4 SV=1[more]
A0A151S5833.96e-0748.15Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_028309 PE=4 SV=1[more]
A0A6A5M9S67.96e-0755.36Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00020923 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh031952.1.t1MELO.jh031952.1.t1mRNA