MELO.jh031880.1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh031880.1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	CACTA en-spm transposon protein
Location	chr09: 19637882 .. 19639268 (-)
RNA-Seq Expression	MELO.jh031880.1
Synteny	MELO.jh031880.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

TCATTCCCACGCACTAATTTCCTCGAGACGAATGCTATGTTTCTCAAGTTTGCAGACGATTTAGATAAACTTGCGAGAGGGTCATCCTCCGTGGGCGACAATTTGGGTGAGTCTAATAATAGTATTTTAACTTAGGATTATTTCAAGGTTTTTTCTAACATTATATGTTCTTATAATTTATTAAGCAGGGTCGTCTTCTTAACCATCTGCGACTCCGACTCCTAGGAGACGTGCGTAGTCTCAACTCTTAGAGTTGGAGCGCTACGTTGCAGCCAATGGGTGGATTCCGATGATGATCGTGTTTGTGGCGCGGAGAAGCCTATTTCCCTACACGTCGTTTGCTTCAGCCAGACGATAGGCTTGTGTGTGTGAAAGATAATTCTCATCCGCTACCTTAAGTGAACGGACGTAGGCAGAGAATTCATTGAGGTTGTCAAGGGCAACCTCCAAGTAAGTCCACTACACATTTATGATTTCATCTGAAATATATTTAAGTTAACCAAACTAATGTGTTATTTTTGTAATGTGTGGCGATTTTTTGTGCTTGATTTCAATGATCAAGCAATGAATAAATTCGTTGAGTATCAGATGCTCACCACCTTTAAAGAGTTTCGGGATGACTGTCATAGACACTTCAAAAAGTATAGCGATCCCGAGGAGGCTCGTGCCAACCCATCAAACCTATTAGTGGGACGTGATGAAGATTGACACTTCCTCTATTGCCACTACATGAGCCGTGCATTCCAGGTGAGCAACTGAACTTTTTGTCATGGTTAATTATGATTTCAACTTTTAATATGTATAAGAAATAAACAATATAATTGTTTTCTGCAGGAGCAATCACGGACGAACAAGGTTGCTAGACAGAAACAACCTTATAATCATAGTAGTGGGTCAAAGTCGTTTCTACAACGATAGCACGAGCTCTCTGAGCAAACATAGGAGTCGGTTGATCGTGTGGAGTTATTTCGACAAACATATGTTCGAGACGAGACGTTCGTGTCCCAAGCTGAAGAGGATGCACATGTAAGTTATCCAACCAACACTTCTGCTTTCATTTGTCCTCTTTTAATATATAATATATTTTTTTACTTACTAAGATAGTTTCTAAATTTGTTGCAGCATCAAATGCTAGAACTCCCGTTCCAGCCTACCCTAGAGGATAGTCAGCTACTTTCTGAGATGAGATATGCGAGACGGTGTTGGGTAGATGACCGGACTACTCAAAAGACCTTGGTTGGGGACCCAAGTCAAAGGCTTGCAAGACGACGAGTGTGAGCAGTTCTACGACGTCATGTCCGCAATCCACAATATAGCTTCAATTACAGGCTAAGTTTGATCAAGTTATGCAACGGATTGAAGAGCATACAAGAAATCATGAAGCGTT

mRNA sequence

TCATTCCCACGCACTAATTTCCTCGAGACGAATGCTATGTTTCTCAAGTTTGCAGACGATTTAGATAAACTTGCGAGAGGGTCATCCTCCGTGGGCGACAATTTGGGTGAGTCTAATAATAGGTCGTCTTCTTAACCATCTGCGACTCCGACTCCTAGGAGACGTGCGTAGTCTCAACTCTTAGAGTTGGAGCGCTACGTTGCAGCCAATGGGTGGATTCCGATGATGATCGTGTTTGTGGCGCGGAGAAGCCTATTTCCCTACACGTCGTTTGCTTCAGCCAGACGATAGGCTTGTGTGTGTGAAAGATAATTCTCATCCGCTACCTTAAGTGAACGGACGTAGGCAGAGAATTCATTGAGGTTGTCAAGGGCAACCTCCAACGATTTTTTGTGCTTGATTTCAATGATCAAGCAATGAATAAATTCGTTGAGTATCAGATGCTCACCACCTTTAAAGAGTTTCGGGATGACTGTCATAGACACTTCAAAAAGTATAGCGATCCCGAGGAGGCTCGTGCCAACCCATCAAACCTATTAGAGCAATCACGGACGAACAAGGTTGCTAGACAGAAACAACCTTATAATCATAGTAGTGGGTCAAAGTCGTTTCTACAACGATAGCACGAGCTCTCTGAGCAAACATAGGAGTCGGTTGATCGTGTGGAGTTATTTCGACAAACATATGTTCGAGACGAGACATAGTTTCTAAATTTGTTGCAGCATCAAATGCTAGAACTCCCGTTCCAGCCTACCCTAGAGGATAGACCCAAGTCAAAGGCTTGCAAGACGACGAGTGTGAGCAGTTCTACGACGTCATGTCCGCAATCCACAATATAGCTTCAATTACAGGCTAAGTTTGATCAAGTTATGCAACGGATTGAAGAGCATACAAGAAATCATGAAGCGTT

Coding sequence (CDS)

ATGAATAAATTCGTTGAGTATCAGATGCTCACCACCTTTAAAGAGTTTCGGGATGACTGTCATAGACACTTCAAAAAGTATAGCGATCCCGAGGAGGCTCGTGCCAACCCATCAAACCTATTAGAGCAATCACGGACGAACAAGGTTGCTAGACAGAAACAACCTTATAATCATAGTAGTGGGTCAAAGTCGTTTCTACAACGATAG

Protein sequence

MNKFVEYQMLTTFKEFRDDCHRHFKKYSDPEEARANPSNLLEQSRTNKVARQKQPYNHSSGSKSFLQR

Homology

[Close]

BLAST of MELO.jh031880.1 vs. NCBI nr
Match: KAA0033296.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 128 bits (322), Expect = 5.04e-34
Identity = 63/68 (92.65%), Postives = 65/68 (95.59%), Query Frame = 0


Query: 1   MNKFVEYQMLTTFKEFRDDCHRHFKKYSDPEEARANPSNLLEQSRTNKVARQKQPYNHSS 60
           MN+FVE+QMLTTFKEFR DCHRHFKKYSDPEEARANP N LEQSRTNKVARQKQPYNHSS
Sbjct: 127 MNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNALEQSRTNKVARQKQPYNHSS 186

Query: 61  GSKSFLQR 68
           GSKSFLQR
Sbjct: 187 GSKSFLQR 194

[Close]

BLAST of MELO.jh031880.1 vs. NCBI nr
Match: KAA0025427.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK04756.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 127 bits (318), Expect = 6.95e-34
Identity = 62/68 (91.18%), Postives = 64/68 (94.12%), Query Frame = 0


Query: 1   MNKFVEYQMLTTFKEFRDDCHRHFKKYSDPEEARANPSNLLEQSRTNKVARQKQPYNHSS 60
           MN+FVE+QMLTTFKEFR DCHRHFKKYSDPEEARANP N LEQSRTNK ARQKQPYNHSS
Sbjct: 114 MNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNALEQSRTNKAARQKQPYNHSS 173

Query: 61  GSKSFLQR 68
           GSKSFLQR
Sbjct: 174 GSKSFLQR 181

[Close]

BLAST of MELO.jh031880.1 vs. NCBI nr
Match: KAA0056417.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK29103.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 125 bits (315), Expect = 1.87e-33
Identity = 61/68 (89.71%), Postives = 64/68 (94.12%), Query Frame = 0


Query: 1   MNKFVEYQMLTTFKEFRDDCHRHFKKYSDPEEARANPSNLLEQSRTNKVARQKQPYNHSS 60
           MN+FVE+QM+TTFKEFR DCHRHFKKYSDPEEARANP N LEQSRTNK ARQKQPYNHSS
Sbjct: 120 MNRFVEHQMVTTFKEFRADCHRHFKKYSDPEEARANPPNALEQSRTNKAARQKQPYNHSS 179

Query: 61  GSKSFLQR 68
           GSKSFLQR
Sbjct: 180 GSKSFLQR 187

[Close]

BLAST of MELO.jh031880.1 vs. NCBI nr
Match: KAA0032480.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 127 bits (318), Expect = 4.40e-33
Identity = 62/68 (91.18%), Postives = 64/68 (94.12%), Query Frame = 0


Query: 1   MNKFVEYQMLTTFKEFRDDCHRHFKKYSDPEEARANPSNLLEQSRTNKVARQKQPYNHSS 60
           MN+FVE+QMLTTFKEFR DCHRHFKKYSDPEEARANP N LEQSRTNK ARQKQPYNHSS
Sbjct: 173 MNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNALEQSRTNKAARQKQPYNHSS 232

Query: 61  GSKSFLQR 68
           GSKSFLQR
Sbjct: 233 GSKSFLQR 240

[Close]

BLAST of MELO.jh031880.1 vs. NCBI nr
Match: KAA0053771.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK25631.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 125 bits (314), Expect = 4.64e-33
Identity = 62/68 (91.18%), Postives = 63/68 (92.65%), Query Frame = 0


Query: 1   MNKFVEYQMLTTFKEFRDDCHRHFKKYSDPEEARANPSNLLEQSRTNKVARQKQPYNHSS 60
           MNKFVE+QMLTTFKEF  DCHRHFKKYSDPEEARANP N LEQSRTNK ARQKQPYNHSS
Sbjct: 127 MNKFVEHQMLTTFKEFWTDCHRHFKKYSDPEEARANPPNALEQSRTNKAARQKQPYNHSS 186

Query: 61  GSKSFLQR 68
           GSKSFLQR
Sbjct: 187 GSKSFLQR 194

[Close]

BLAST of MELO.jh031880.1 vs. ExPASy TrEMBL
Match: A0A5A7STH7 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold845G001060 PE=4 SV=1)

HSP 1 Score: 128 bits (322), Expect = 2.44e-34
Identity = 63/68 (92.65%), Postives = 65/68 (95.59%), Query Frame = 0


Query: 1   MNKFVEYQMLTTFKEFRDDCHRHFKKYSDPEEARANPSNLLEQSRTNKVARQKQPYNHSS 60
           MN+FVE+QMLTTFKEFR DCHRHFKKYSDPEEARANP N LEQSRTNKVARQKQPYNHSS
Sbjct: 127 MNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNALEQSRTNKVARQKQPYNHSS 186

Query: 61  GSKSFLQR 68
           GSKSFLQR
Sbjct: 187 GSKSFLQR 194

[Close]

BLAST of MELO.jh031880.1 vs. ExPASy TrEMBL
Match: A0A5D3C2U8 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold68G00580 PE=4 SV=1)

HSP 1 Score: 127 bits (318), Expect = 3.37e-34
Identity = 62/68 (91.18%), Postives = 64/68 (94.12%), Query Frame = 0


Query: 1   MNKFVEYQMLTTFKEFRDDCHRHFKKYSDPEEARANPSNLLEQSRTNKVARQKQPYNHSS 60
           MN+FVE+QMLTTFKEFR DCHRHFKKYSDPEEARANP N LEQSRTNK ARQKQPYNHSS
Sbjct: 114 MNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNALEQSRTNKAARQKQPYNHSS 173

Query: 61  GSKSFLQR 68
           GSKSFLQR
Sbjct: 174 GSKSFLQR 181

[Close]

BLAST of MELO.jh031880.1 vs. ExPASy TrEMBL
Match: A0A5A7UP83 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold120G002380 PE=4 SV=1)

HSP 1 Score: 125 bits (315), Expect = 9.03e-34
Identity = 61/68 (89.71%), Postives = 64/68 (94.12%), Query Frame = 0


Query: 1   MNKFVEYQMLTTFKEFRDDCHRHFKKYSDPEEARANPSNLLEQSRTNKVARQKQPYNHSS 60
           MN+FVE+QM+TTFKEFR DCHRHFKKYSDPEEARANP N LEQSRTNK ARQKQPYNHSS
Sbjct: 120 MNRFVEHQMVTTFKEFRADCHRHFKKYSDPEEARANPPNALEQSRTNKAARQKQPYNHSS 179

Query: 61  GSKSFLQR 68
           GSKSFLQR
Sbjct: 180 GSKSFLQR 187

[Close]

BLAST of MELO.jh031880.1 vs. ExPASy TrEMBL
Match: A0A5A7SNU6 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold500G00040 PE=4 SV=1)

HSP 1 Score: 127 bits (318), Expect = 2.13e-33
Identity = 62/68 (91.18%), Postives = 64/68 (94.12%), Query Frame = 0


Query: 1   MNKFVEYQMLTTFKEFRDDCHRHFKKYSDPEEARANPSNLLEQSRTNKVARQKQPYNHSS 60
           MN+FVE+QMLTTFKEFR DCHRHFKKYSDPEEARANP N LEQSRTNK ARQKQPYNHSS
Sbjct: 173 MNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNALEQSRTNKAARQKQPYNHSS 232

Query: 61  GSKSFLQR 68
           GSKSFLQR
Sbjct: 233 GSKSFLQR 240

[Close]

BLAST of MELO.jh031880.1 vs. ExPASy TrEMBL
Match: A0A5D3DPN3 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007910 PE=4 SV=1)

HSP 1 Score: 125 bits (314), Expect = 2.25e-33
Identity = 62/68 (91.18%), Postives = 63/68 (92.65%), Query Frame = 0


Query: 1   MNKFVEYQMLTTFKEFRDDCHRHFKKYSDPEEARANPSNLLEQSRTNKVARQKQPYNHSS 60
           MNKFVE+QMLTTFKEF  DCHRHFKKYSDPEEARANP N LEQSRTNK ARQKQPYNHSS
Sbjct: 127 MNKFVEHQMLTTFKEFWTDCHRHFKKYSDPEEARANPPNALEQSRTNKAARQKQPYNHSS 186

Query: 61  GSKSFLQR 68
           GSKSFLQR
Sbjct: 187 GSKSFLQR 194

The following BLAST results are available for this feature:

BLAST of MELO.jh031880.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0033296.1	5.04e-34	92.65	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
KAA0025427.1	6.95e-34	91.18	CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK04756.1 CACTA en-...	[more]
KAA0056417.1	1.87e-33	89.71	CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK29103.1 CACTA en-...	[more]
KAA0032480.1	4.40e-33	91.18	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
KAA0053771.1	4.64e-33	91.18	CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK25631.1 CACTA en-...	[more]

BLAST of MELO.jh031880.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO.jh031880.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7STH7	2.44e-34	92.65	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5D3C2U8	3.37e-34	91.18	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5A7UP83	9.03e-34	89.71	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5A7SNU6	2.13e-33	91.18	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5D3DPN3	2.25e-33	91.18	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]

BLAST of MELO.jh031880.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..68
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..68

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO.jh031880.1.t1	MELO.jh031880.1.t1	mRNA