MELO.jh031728.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh031728.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr08: 31637912 .. 31638461 (+)
RNA-Seq ExpressionMELO.jh031728.1
SyntenyMELO.jh031728.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
GCAAGGTCCGGCAGCGGCGCATCGGCCTGCAAATACTGCAGAACCTGGTACATGGTGGGACGAACGGCAGGGGAGGAGTGGGAACAGAGCAACCCGAGTTTGAGAACCAATTCGAGCTGTGAAGGTTCGAAATTGCCACCCAATTTGGGATCGGCAGTCCGGAGAATGTTGCCGTTGGACCAAGAAGATAGAACCCAATCCATTAAAATGAAATCGTCGGAGTCTTCTTGAGGATGAATAGGCCTTCTTCCGCAGGCTACTTCAAGAAGAAAAGCCCCGAATGCGTAAACGTCTGTTCTTGTTGTGGCCCTCCCTGTTCTTATGTGCTCTGGCGCTAGATACCTGCGTTCCACAATCATCTCTCATTAACGGAAGGTTCAACATTTAGAAAAGTAATAAGCCAAACCACAATGGTGTAAATGATTGAGACGTCCAAAAATGATTTCAAAAGTTTGACAACAAAAATATTTACTTCTTTAAATGTCAAACTCCAAATCTTTTACCTTTTAAATATTCAAATATGAAATGAAGAAAATTTGAAAGTTTTATA

mRNA sequence

GCAAGGTCCGGCAGCGGCGCATCGGCCTGCAAATACTGCAGAACCTGGTACATGGTGGGACGAACGGCAGGGGAGGAGTGGGAACAGAGCAACCCGAGTTTGAGAACCAATTCGAGCTGTGAAGGTTCGAAATTGCCACCCAATTTGGGATCGGCAGTCCGGAGAATGTTGCCGTTGGACCAAGAAGATAGAACCCAATCCATTAAAATGAAATCGTCGGAGTCTTCTTGAGGATGAATAGGCCTTCTTCCGCAGGCTACTTCAAGAAGAAAAGCCCCGAATGCGTAAACGTCTGTTCTTGTTGTGGCCCTCCCTGTTCTTATGTGCTCTGGCGCTAGATACCTGCGTTCCACAATCATCTCTCATTAACGGAAGGTTCAACATTTAGAAAAGTAATAAGCCAAACCACAATGGTGTAAATGATTGAGACGTCCAAAAATGATTTCAAAAGTTTGACAACAAAAATATTTACTTCTTTAAATGTCAAACTCCAAATCTTTTACCTTTTAAATATTCAAATATGAAATGAAGAAAATTTGAAAGTTTTATA

Coding sequence (CDS)

ATGGTGGGACGAACGGCAGGGGAGGAGTGGGAACAGAGCAACCCGAGTTTGAGAACCAATTCGAGCTGTGAAGGTTCGAAATTGCCACCCAATTTGGGATCGGCAGTCCGGAGAATGTTGCCGTTGGACCAAGAAGATAGAACCCAATCCATTAAAATGAAATCGTCGGAGTCTTCTTGA

Protein sequence

MVGRTAGEEWEQSNPSLRTNSSCEGSKLPPNLGSAVRRMLPLDQEDRTQSIKMKSSESS
Homology
[Close]
BLAST of MELO.jh031728.1 vs. NCBI nr
Match: KCW58876.1 (hypothetical protein EUGRSUZ_H01503 [Eucalyptus grandis])

HSP 1 Score: 51.6 bits (122), Expect = 1.43e-06
Identity = 26/56 (46.43%), Postives = 31/56 (55.36%), Query Frame = 0 

Query: 1  MVGRTAGEEWEQSNPSLRTNSSCEGSKLPPNLGSAVRRMLPLDQEDRTQSIKMKSS 56
          M+G   G  WE  NPS  TNS+   +    N GS   RM PL Q+D TQS K+ SS
Sbjct: 1  MLGLIDGLGWEHINPSFSTNSTSSSTNSALNFGSLASRMSPLSQQDNTQSTKITSS 56

[Close]
BLAST of MELO.jh031728.1 vs. ExPASy TrEMBL
Match: A0A059AZ02 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_H01503 PE=4 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 6.91e-07
Identity = 26/56 (46.43%), Postives = 31/56 (55.36%), Query Frame = 0 

Query: 1  MVGRTAGEEWEQSNPSLRTNSSCEGSKLPPNLGSAVRRMLPLDQEDRTQSIKMKSS 56
          M+G   G  WE  NPS  TNS+   +    N GS   RM PL Q+D TQS K+ SS
Sbjct: 1  MLGLIDGLGWEHINPSFSTNSTSSSTNSALNFGSLASRMSPLSQQDNTQSTKITSS 56

The following BLAST results are available for this feature:
BLAST of MELO.jh031728.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KCW58876.11.43e-0646.43hypothetical protein EUGRSUZ_H01503 [Eucalyptus grandis][more]
BLAST of MELO.jh031728.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO.jh031728.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A059AZ026.91e-0746.43Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_H01503 PE=4 SV... [more]
BLAST of MELO.jh031728.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..28
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..59

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh031728.1.t1MELO.jh031728.1.t1mRNA