MELO.jh031725.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh031725.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr08: 30598080 .. 30598532 (+)
RNA-Seq ExpressionMELO.jh031725.1
SyntenyMELO.jh031725.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAACAAAAAAGAATTGAAGTATTTGCAAAGAAATTGAAGTTTGAGGTTAAAAGAAAAAAAAAAAAAGAGGATAAAAAGAATGGGAAAGCAAATAATAGAAAGAAAAATGAAAAATTGGATAGATGAAGTAGCTCCATCTCCAATAATTTCTCCACATAAACCCTCAACAGTTCCTTCTTTGGAACCCATCACTGAAGAAACCCCTCAACATCATCAATACCACAGTCCACAACATTCATAATTTCTCTATCCCCAACCAATTTTTTTAATCTTTTTTTTTTTTTATATATATTTTTTGTTCTTTTCTTCTTCTCTCCAATGTTATTGTAAATATATGTATTTAATCATGGATTCTTTTCAATTGTAAATATTTTGTACTTTTTATTCTATTTTTCATGATTTTGTACACTCTCAACATTTAATTTATTCCAAAGGATTCATTTTGTTTTTCA

mRNA sequence

AAAACAAAAAAGAATTGAAGTATTTGCAAAGAAATTGAAGTTTGAGGTTAAAAGAAAAAAAAAAAAAGAGGATAAAAAGAATGGGAAAGCAAATAATAGAAAGAAAAATGAAAAATTGGATAGATGAAGTAGCTCCATCTCCAATAATTTCTCCACATAAACCCTCAACAGTTCCTTCTTTGGAACCCATCACTGAAGAAACCCCTCAACATCATCAATACCACAGTCCACAACATTCATAATTTCTCTATCCCCAACCAATTTTTTTAATCTTTTTTTTTTTTTATATATATTTTTTGTTCTTTTCTTCTTCTCTCCAATGTTATTGTAAATATATGTATTTAATCATGGATTCTTTTCAATTGTAAATATTTTGTACTTTTTATTCTATTTTTCATGATTTTGTACACTCTCAACATTTAATTTATTCCAAAGGATTCATTTTGTTTTTCA

Coding sequence (CDS)

ATGGGAAAGCAAATAATAGAAAGAAAAATGAAAAATTGGATAGATGAAGTAGCTCCATCTCCAATAATTTCTCCACATAAACCCTCAACAGTTCCTTCTTTGGAACCCATCACTGAAGAAACCCCTCAACATCATCAATACCACAGTCCACAACATTCATAA

Protein sequence

MGKQIIERKMKNWIDEVAPSPIISPHKPSTVPSLEPITEETPQHHQYHSPQHS
Homology
BLAST of MELO.jh031725.1 vs. NCBI nr
Match: QCE05963.1 (hypothetical protein DEO72_LG9g972 [Vigna unguiculata])

HSP 1 Score: 45.1 bits (105), Expect = 1.74e-04
Identity = 21/38 (55.26%), Postives = 28/38 (73.68%), Query Frame = 0

Query: 8  RKMKNWIDEVAPSPIISPHKPSTVPSLEPITEETPQHH 45
          R + +W+ EVAP+PII P KPS +P+L  ITEE P+ H
Sbjct: 6  RNLSSWM-EVAPAPIILPRKPSNLPALATITEEVPEEH 42

BLAST of MELO.jh031725.1 vs. NCBI nr
Match: KAE9589992.1 (hypothetical protein Lalb_Chr21g0314811 [Lupinus albus])

HSP 1 Score: 44.7 bits (104), Expect = 2.18e-04
Identity = 22/34 (64.71%), Postives = 27/34 (79.41%), Query Frame = 0

Query: 8  RKMKNWIDEVAPSPIISPHKPSTVPSLEPITEET 41
          R + +W+ EVAP+PII P KPS +PSLE ITEET
Sbjct: 6  RNLSSWM-EVAPAPIIFPKKPSNMPSLETITEET 38

BLAST of MELO.jh031725.1 vs. NCBI nr
Match: KAG5043762.1 (hypothetical protein JHK87_007677 [Glycine soja] >KHN09501.1 hypothetical protein glysoja_016600 [Glycine soja] >KRH67689.1 hypothetical protein GLYMA_03G181000v4 [Glycine max] >RZC21279.1 hypothetical protein D0Y65_007515 [Glycine soja])

HSP 1 Score: 44.3 bits (103), Expect = 3.44e-04
Identity = 22/33 (66.67%), Postives = 26/33 (78.79%), Query Frame = 0

Query: 8  RKMKNWIDEVAPSPIISPHKPSTVPSLEPITEE 40
          RK+ +WI EVAP+PII P KPS  P+LE ITEE
Sbjct: 8  RKLSSWI-EVAPAPIIYPKKPSNTPTLETITEE 39

BLAST of MELO.jh031725.1 vs. NCBI nr
Match: KAG5055551.1 (hypothetical protein JHK85_008061 [Glycine max] >KAG5072615.1 hypothetical protein JHK86_007826 [Glycine max])

HSP 1 Score: 44.3 bits (103), Expect = 4.19e-04
Identity = 22/33 (66.67%), Postives = 26/33 (78.79%), Query Frame = 0

Query: 8  RKMKNWIDEVAPSPIISPHKPSTVPSLEPITEE 40
          RK+ +WI EVAP+PII P KPS  P+LE ITEE
Sbjct: 8  RKLSSWI-EVAPAPIIYPKKPSNTPTLETITEE 39

BLAST of MELO.jh031725.1 vs. NCBI nr
Match: XP_007162748.1 (hypothetical protein PHAVU_001G177100g [Phaseolus vulgaris] >ESW34742.1 hypothetical protein PHAVU_001G177100g [Phaseolus vulgaris])

HSP 1 Score: 43.9 bits (102), Expect = 5.33e-04
Identity = 22/33 (66.67%), Postives = 26/33 (78.79%), Query Frame = 0

Query: 8  RKMKNWIDEVAPSPIISPHKPSTVPSLEPITEE 40
          RK+ +WI EVAP+PII P KPS  P+LE ITEE
Sbjct: 6  RKVSSWI-EVAPAPIIFPKKPSNTPTLETITEE 37

BLAST of MELO.jh031725.1 vs. ExPASy TrEMBL
Match: A0A2N9F9H9 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15448 PE=4 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 1.71e-05
Identity = 26/49 (53.06%), Postives = 32/49 (65.31%), Query Frame = 0

Query: 1  MGKQIIERKMKNWIDEVAPSPIISPHKPSTVPSLEPITEETPQHHQYHS 49
          M K+ I   + +WI EVAP+PII P KPS  PSLEPI EE  + + Y S
Sbjct: 1  MAKETIN--LNSWI-EVAPAPIIHPQKPSNSPSLEPIAEEDAEEYDYDS 46

BLAST of MELO.jh031725.1 vs. ExPASy TrEMBL
Match: A0A4D6MWY8 (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG9g972 PE=4 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 8.45e-05
Identity = 21/38 (55.26%), Postives = 28/38 (73.68%), Query Frame = 0

Query: 8  RKMKNWIDEVAPSPIISPHKPSTVPSLEPITEETPQHH 45
          R + +W+ EVAP+PII P KPS +P+L  ITEE P+ H
Sbjct: 6  RNLSSWM-EVAPAPIILPRKPSNLPALATITEEVPEEH 42

BLAST of MELO.jh031725.1 vs. ExPASy TrEMBL
Match: A0A6A4NKD9 (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lalb_Chr21g0314811 PE=4 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 1.05e-04
Identity = 22/34 (64.71%), Postives = 27/34 (79.41%), Query Frame = 0

Query: 8  RKMKNWIDEVAPSPIISPHKPSTVPSLEPITEET 41
          R + +W+ EVAP+PII P KPS +PSLE ITEET
Sbjct: 6  RNLSSWM-EVAPAPIIFPKKPSNMPSLETITEET 38

BLAST of MELO.jh031725.1 vs. ExPASy TrEMBL
Match: A0A2N9FKD1 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15447 PE=4 SV=1)

HSP 1 Score: 44.3 bits (103), Expect = 1.41e-04
Identity = 22/33 (66.67%), Postives = 25/33 (75.76%), Query Frame = 0

Query: 8  RKMKNWIDEVAPSPIISPHKPSTVPSLEPITEE 40
          R + +WI EVAP+PII P KPS  PSLEPI EE
Sbjct: 6  RNLNSWI-EVAPAPIIYPQKPSNSPSLEPIAEE 37

BLAST of MELO.jh031725.1 vs. ExPASy TrEMBL
Match: K7KFS8 (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_03G181000 PE=4 SV=1)

HSP 1 Score: 44.3 bits (103), Expect = 1.67e-04
Identity = 22/33 (66.67%), Postives = 26/33 (78.79%), Query Frame = 0

Query: 8  RKMKNWIDEVAPSPIISPHKPSTVPSLEPITEE 40
          RK+ +WI EVAP+PII P KPS  P+LE ITEE
Sbjct: 8  RKLSSWI-EVAPAPIIYPKKPSNTPTLETITEE 39

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
QCE05963.11.74e-0455.26hypothetical protein DEO72_LG9g972 [Vigna unguiculata][more]
KAE9589992.12.18e-0464.71hypothetical protein Lalb_Chr21g0314811 [Lupinus albus][more]
KAG5043762.13.44e-0466.67hypothetical protein JHK87_007677 [Glycine soja] >KHN09501.1 hypothetical protei... [more]
KAG5055551.14.19e-0466.67hypothetical protein JHK85_008061 [Glycine max] >KAG5072615.1 hypothetical prote... [more]
XP_007162748.15.33e-0466.67hypothetical protein PHAVU_001G177100g [Phaseolus vulgaris] >ESW34742.1 hypothet... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2N9F9H91.71e-0553.06Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15448 PE=4 SV=1[more]
A0A4D6MWY88.45e-0555.26Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG9g972 PE=4 SV=1[more]
A0A6A4NKD91.05e-0464.71Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lalb_Chr21g0314811 PE=4 SV=1[more]
A0A2N9FKD11.41e-0466.67Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15447 PE=4 SV=1[more]
K7KFS81.67e-0466.67Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_03G181000 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..53

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh031725.1.t1MELO.jh031725.1.t1mRNA