MELO.jh031617.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh031617.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionSerine/threonine-protein phosphatase
Locationchr08: 13949041 .. 13949232 (-)
RNA-Seq ExpressionMELO.jh031617.1
SyntenyMELO.jh031617.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTGTGGAGGATTGATATGAATTATTTGTCGAGAGACAACTTGTCACAATATTTTTGACCCCTAACAACTGTGGTGAATTTGATAATGTCGGTGCACTGATGAGTGTTGATGAAGAATTGATGTGCTCTCTTCAGATTCTTAAGCCAGTTGACGAAAATGGTAATAAAGTCATGGTGCCAACAAGAACGTAA

mRNA sequence

GTTGTGGAGGATTGATATGAATTATTTGTCGAGAGACAACTTGTCACAATATTTTTGACCCCTAACAACTGTGGTGAATTTGATAATGTCGGTGCACTGATGAGTGTTGATGAAGAATTGATGTGCTCTCTTCAGATTCTTAAGCCAGTTGACGAAAATGGTAATAAAGTCATGGTGCCAACAAGAACGTAA

Coding sequence (CDS)

ATGAGTGTTGATGAAGAATTGATGTGCTCTCTTCAGATTCTTAAGCCAGTTGACGAAAATGGTAATAAAGTCATGGTGCCAACAAGAACGTAA

Protein sequence

MSVDEELMCSLQILKPVDENGNKVMVPTRT
Homology
BLAST of MELO.jh031617.1 vs. NCBI nr
Match: KAA0059790.1 (serine/threonine-protein phosphatase PP1 isozyme 4 [Cucumis melo var. makuwa] >TYJ99802.1 serine/threonine-protein phosphatase PP1 isozyme 4 [Cucumis melo var. makuwa])

HSP 1 Score: 63.9 bits (154), Expect = 3.14e-11
Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 0

Query: 1   MSVDEELMCSLQILKPVDENGNKVMVPTRT 30
           MSVDEELMCSLQILKPVDENGNKVMVPTRT
Sbjct: 145 MSVDEELMCSLQILKPVDENGNKVMVPTRT 174

BLAST of MELO.jh031617.1 vs. NCBI nr
Match: KAA0042362.1 (serine/threonine-protein phosphatase PP1 isozyme 4 [Cucumis melo var. makuwa] >TYK15484.1 serine/threonine-protein phosphatase PP1 isozyme 4 [Cucumis melo var. makuwa])

HSP 1 Score: 61.6 bits (148), Expect = 1.02e-09
Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 0

Query: 1  MSVDEELMCSLQILKPVDENGNKVMVPTRT 30
          MSVDEELMC LQILKPVDENGNKVMVPTRT
Sbjct: 66 MSVDEELMCFLQILKPVDENGNKVMVPTRT 95

BLAST of MELO.jh031617.1 vs. NCBI nr
Match: XP_008461712.1 (PREDICTED: serine/threonine-protein phosphatase PP1 isozyme 4 [Cucumis melo] >XP_016902748.1 PREDICTED: serine/threonine-protein phosphatase PP1 isozyme 4 [Cucumis melo])

HSP 1 Score: 55.1 bits (131), Expect = 2.04e-07
Identity = 25/30 (83.33%), Postives = 26/30 (86.67%), Query Frame = 0

Query: 1   MSVDEELMCSLQILKPVDENGNKVMVPTRT 30
           MSVDEELMCS QILKP D+ GNKVMVP RT
Sbjct: 288 MSVDEELMCSFQILKPADKKGNKVMVPART 317

BLAST of MELO.jh031617.1 vs. NCBI nr
Match: XP_004150636.1 (serine/threonine-protein phosphatase PP1 isozyme 4 [Cucumis sativus] >KGN50582.1 hypothetical protein Csa_021459 [Cucumis sativus])

HSP 1 Score: 55.1 bits (131), Expect = 2.04e-07
Identity = 25/30 (83.33%), Postives = 26/30 (86.67%), Query Frame = 0

Query: 1   MSVDEELMCSLQILKPVDENGNKVMVPTRT 30
           MSVDEELMCS QILKP D+ GNKVMVP RT
Sbjct: 288 MSVDEELMCSFQILKPADKKGNKVMVPART 317

BLAST of MELO.jh031617.1 vs. NCBI nr
Match: XP_038891017.1 (serine/threonine-protein phosphatase PP1 isozyme 4-like [Benincasa hispida])

HSP 1 Score: 55.1 bits (131), Expect = 2.04e-07
Identity = 25/30 (83.33%), Postives = 26/30 (86.67%), Query Frame = 0

Query: 1   MSVDEELMCSLQILKPVDENGNKVMVPTRT 30
           MSVDEELMCS QILKP D+ GNKVMVP RT
Sbjct: 288 MSVDEELMCSFQILKPADKKGNKVMVPART 317

BLAST of MELO.jh031617.1 vs. ExPASy TrEMBL
Match: A0A5D3BJ73 (Serine/threonine-protein phosphatase PP1 isozyme 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold896G00500 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.52e-11
Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 0

Query: 1   MSVDEELMCSLQILKPVDENGNKVMVPTRT 30
           MSVDEELMCSLQILKPVDENGNKVMVPTRT
Sbjct: 145 MSVDEELMCSLQILKPVDENGNKVMVPTRT 174

BLAST of MELO.jh031617.1 vs. ExPASy TrEMBL
Match: A0A5A7TG14 (Serine/threonine-protein phosphatase PP1 isozyme 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00670 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 4.93e-10
Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 0

Query: 1  MSVDEELMCSLQILKPVDENGNKVMVPTRT 30
          MSVDEELMC LQILKPVDENGNKVMVPTRT
Sbjct: 66 MSVDEELMCFLQILKPVDENGNKVMVPTRT 95

BLAST of MELO.jh031617.1 vs. ExPASy TrEMBL
Match: A0A1S4E3E8 (Serine/threonine-protein phosphatase OS=Cucumis melo OX=3656 GN=LOC103500246 PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 9.85e-08
Identity = 25/30 (83.33%), Postives = 26/30 (86.67%), Query Frame = 0

Query: 1   MSVDEELMCSLQILKPVDENGNKVMVPTRT 30
           MSVDEELMCS QILKP D+ GNKVMVP RT
Sbjct: 288 MSVDEELMCSFQILKPADKKGNKVMVPART 317

BLAST of MELO.jh031617.1 vs. ExPASy TrEMBL
Match: A0A0A0KQB9 (Serine/threonine-protein phosphatase OS=Cucumis sativus OX=3659 GN=Csa_5G184820 PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 9.85e-08
Identity = 25/30 (83.33%), Postives = 26/30 (86.67%), Query Frame = 0

Query: 1   MSVDEELMCSLQILKPVDENGNKVMVPTRT 30
           MSVDEELMCS QILKP D+ GNKVMVP RT
Sbjct: 288 MSVDEELMCSFQILKPADKKGNKVMVPART 317

BLAST of MELO.jh031617.1 vs. ExPASy TrEMBL
Match: A0A6J1CB15 (Serine/threonine-protein phosphatase OS=Momordica charantia OX=3673 GN=LOC111010031 PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 9.85e-08
Identity = 25/30 (83.33%), Postives = 26/30 (86.67%), Query Frame = 0

Query: 1   MSVDEELMCSLQILKPVDENGNKVMVPTRT 30
           MSVDEELMCS QILKP D+ GNK MVPTRT
Sbjct: 288 MSVDEELMCSFQILKPADKKGNKFMVPTRT 317

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0059790.13.14e-11100.00serine/threonine-protein phosphatase PP1 isozyme 4 [Cucumis melo var. makuwa] >T... [more]
KAA0042362.11.02e-0996.67serine/threonine-protein phosphatase PP1 isozyme 4 [Cucumis melo var. makuwa] >T... [more]
XP_008461712.12.04e-0783.33PREDICTED: serine/threonine-protein phosphatase PP1 isozyme 4 [Cucumis melo] >XP... [more]
XP_004150636.12.04e-0783.33serine/threonine-protein phosphatase PP1 isozyme 4 [Cucumis sativus] >KGN50582.1... [more]
XP_038891017.12.04e-0783.33serine/threonine-protein phosphatase PP1 isozyme 4-like [Benincasa hispida][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BJ731.52e-11100.00Serine/threonine-protein phosphatase PP1 isozyme 4 OS=Cucumis melo var. makuwa O... [more]
A0A5A7TG144.93e-1096.67Serine/threonine-protein phosphatase PP1 isozyme 4 OS=Cucumis melo var. makuwa O... [more]
A0A1S4E3E89.85e-0883.33Serine/threonine-protein phosphatase OS=Cucumis melo OX=3656 GN=LOC103500246 PE=... [more]
A0A0A0KQB99.85e-0883.33Serine/threonine-protein phosphatase OS=Cucumis sativus OX=3659 GN=Csa_5G184820 ... [more]
A0A6J1CB159.85e-0883.33Serine/threonine-protein phosphatase OS=Momordica charantia OX=3673 GN=LOC111010... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh031617.1.t1MELO.jh031617.1.t1mRNA