MELO.jh031561.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh031561.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr08: 6948708 .. 6949235 (+)
RNA-Seq ExpressionMELO.jh031561.1
SyntenyMELO.jh031561.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
AGCCTTTTCCATCCTCTTCCCTCCATCTCTCGCATCTCTCATCTCCATCCCTCGCATCTCTCATCTCCATCTCGCATATTCTCTGACCTCTTTTGTCTCCTCTTCTTCCACCTCTTCGATCTCCACCACCACGCCGGCCGGCGTACGAGACACTACCCAAGATCAACCCTTCCCAACATCAATTCAAAATCCAGAAGGCGTAAGATCCATCTCTTCGATCTCCACCACCACGCATCTCTCATAAAACTTCAATCTTAAAAATTAGAAGAGGAGATGGGAACAACTCCAGCAGGCGTACGAGAGCAGAGAGGTGACTACGGAGGGCAGGCGGGAGGTTAGTAACAAAATTAGTGAAATTTGAAAATTCTTTTAGAACTGGATTAAGCGTTTTTAGACCCAATTTAAGGTAAATTAATTCCTCTGGTTCCTCTTTATCTTTGATACATTGCACACAAGAATAGGCGGGTAACCAAAACGTGAGAGAAAAAAAAATGAAAATCAAAGATGATAATAACAATAAAGTAGATT

mRNA sequence

AGCCTTTTCCATCCTCTTCCCTCCATCTCTCGCATCTCTCATCTCCATCCCTCGCATCTCTCATCTCCATCTCGCATATTCTCTGACCTCTTTTGTCTCCTCTTCTTCCACCTCTTCGATCTCCACCACCACGCCGGCCGGCGTACGAGACACTACCCAAGATCAACCCTTCCCAACATCAATTCAAAATCCAGAAGGCGTAAGATCCATCTCTTCGATCTCCACCACCACGCATCTCTCATAAAACTTCAATCTTAAAAATTAGAAGAGGAGATGGGAACAACTCCAGCAGGCGTACGAGAGCAGAGAGGTGACTACGGAGGGCAGGCGGGAGGTTAGTAACAAAATTAGTGAAATTTGAAAATTCTTTTAGAACTGGATTAAGCGTTTTTAGACCCAATTTAAGGTAAATTAATTCCTCTGGTTCCTCTTTATCTTTGATACATTGCACACAAGAATAGGCGGGTAACCAAAACGTGAGAGAAAAAAAAATGAAAATCAAAGATGATAATAACAATAAAGTAGATT

Coding sequence (CDS)

ATGGGAACAACTCCAGCAGGCGTACGAGAGCAGAGAGGTGACTACGGAGGGCAGGCGGGAGGTTAG

Protein sequence

MGTTPAGVREQRGDYGGQAGG
Homology
[Close]
BLAST of MELO.jh031561.1 vs. NCBI nr
Match: XP_016899191.1 (PREDICTED: uncharacterized protein LOC107990442 [Cucumis melo])

HSP 1 Score: 44.3 bits (103), Expect = 3.64e-04
Identity = 21/21 (100.00%), Postives = 21/21 (100.00%), Query Frame = 0 

Query: 1   MGTTPAGVREQRGDYGGQAGG 21
           MGTTPAGVREQRGDYGGQAGG
Sbjct: 101 MGTTPAGVREQRGDYGGQAGG 121

[Close]
BLAST of MELO.jh031561.1 vs. ExPASy TrEMBL
Match: A0A1S4DT75 (uncharacterized protein LOC107990442 OS=Cucumis melo OX=3656 GN=LOC107990442 PE=4 SV=1)

HSP 1 Score: 44.3 bits (103), Expect = 1.76e-04
Identity = 21/21 (100.00%), Postives = 21/21 (100.00%), Query Frame = 0 

Query: 1   MGTTPAGVREQRGDYGGQAGG 21
           MGTTPAGVREQRGDYGGQAGG
Sbjct: 101 MGTTPAGVREQRGDYGGQAGG 121

The following BLAST results are available for this feature:
BLAST of MELO.jh031561.1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016899191.13.64e-04100.00PREDICTED: uncharacterized protein LOC107990442 [Cucumis melo][more]
BLAST of MELO.jh031561.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO.jh031561.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S4DT751.76e-04100.00uncharacterized protein LOC107990442 OS=Cucumis melo OX=3656 GN=LOC107990442 PE=... [more]
BLAST of MELO.jh031561.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh031561.1.t1MELO.jh031561.1.t1mRNA