MELO.jh031452.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh031452.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr07: 20889865 .. 20890669 (+)
RNA-Seq ExpressionMELO.jh031452.1
SyntenyMELO.jh031452.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
CGCCATCCTTCCTCGACTTCCAATGGAGACCCTGACTTTCTCCATCCCTACAGTGATACCGCCTCGTCTCATGTGTTGTTGCATTGGAGACTTCATTTTTATCTTCTTCTGAAGGCTTCGTCTCAACATGTTGCTCAACTTTTTGCCTCCATATTTTATCTCTTTAGGACTGTCACACTGCACCTGTTCAGGGAAGCAGTTACTATCATCCGATCCGTTGACTTCGTCTATCTTGTCGGCGGCTAATGTCAACATGGGTGATGGGAGATGAGCGGAGCTTGGTATGCTTGGTAGTGGGATTAGGGAGTTTCTCCTAGGAGCGAGGGTCGTCGGTACACGTCGGGCCATTGTGCAAATAGATGCTCTTCCTGTTCTCTTCGGTGGCACAAAACATCGTTCAACCATCTCTGGATTGTTCTCCTTCTCTGCGGAATCAGTGTACTTGGTGGCACCATCCACTGGAGGAAAGGGAAATGATGGTTTGAAGCCATTGTTTTCAGTTAGTGGATGAGTGAGATTTGTTTGCTCCTTTCCAAGTATGTTGTTAAATGGTCCATGTAGATTTTTTTGACTACCTACTAATGGTCGAGTTGCAAGTTGTGGCCTCAATGGTGCAGACTTATGATCTTCTGATTCGGTTTTCATTTGCTGTTCTGCTATTTTGGCGTCAACATGCTGACGTGCTAACTTTCTTTCAACAAGAAGTTGAGCTTCAAGTTCTTTGACCTGTAATGAGCTCACAAAATCAGCACAAGAATATGGTTTGGGTTTCTCTTAAGTCAATATAAAAATTCTATTACCTTGT

mRNA sequence

CGCCATCCTTCCTCGACTTCCAATGGAGACCCTGACTTTCTCCATCCCTACAGTGATACCGCCTCGTCTCATGTGTTGTTGCATTGGAGACTTCATTTTTATCTTCTTCTGAAGGCTTCGTCTCAACATGTTGCTCAACTTTTTGCCTCCATATTTTATCTCTTTAGGACTGTCACACTGCACCTGTTCAGGGAAGCAGTTACTATCATCCGATCCGTTGACTTCGTCTATCTTGTCGGCGGCTAATGTCAACATGGGTGATGGGAGATGAGCGGAGCTTGGTATGCTTGGTAGTGGGATTAGGGAGTTTCTCCTAGGAGCGAGGGTCGTCGGTACACGTCGGGCCATTGTGCAAATAGATGCTCTTCCTGTTCTCTTCGGTGGCACAAAACATCGTTCAACCATCTCTGGATTGTTCTCCTTCTCTGCGGAATCAGTGTACTTGGTGGCACCATCCACTGGAGGAAAGGGAAATGATGGTTTGAAGCCATTGTTTTCAGTTAGTGGATGAGTGAGATTTGTTTGCTCCTTTCCAAGTATGTTGTTAAATGGTCCATGTAGATTTTTTTGACTACCTACTAATGGTCGAGTTGCAAGTTGTGGCCTCAATGGTGCAGACTTATGATCTTCTGATTCGGTTTTCATTTGCTGTTCTGCTATTTTGGCGTCAACATGCTGACGTGCTAACTTTCTTTCAACAAGAAGTTGAGCTTCAAGTTCTTTGACCTGTAATGAGCTCACAAAATCAGCACAAGAATATGGTTTGGGTTTCTCTTAAGTCAATATAAAAATTCTATTACCTTGT

Coding sequence (CDS)

ATGCTTGGTAGTGGGATTAGGGAGTTTCTCCTAGGAGCGAGGGTCGTCGGTACACGTCGGGCCATTGTGCAAATAGATGCTCTTCCTGTTCTCTTCGGTGGCACAAAACATCGTTCAACCATCTCTGGATTGTTCTCCTTCTCTGCGGAATCAGTGTACTTGGTGGCACCATCCACTGGAGGAAAGGGAAATGATGGTTTGAAGCCATTGTTTTCAGTTAGTGGATGA

Protein sequence

MLGSGIREFLLGARVVGTRRAIVQIDALPVLFGGTKHRSTISGLFSFSAESVYLVAPSTGGKGNDGLKPLFSVSG
Homology
[Close]
BLAST of MELO.jh031452.1 vs. NCBI nr
Match: KAF2286186.1 (hypothetical protein GH714_011493 [Hevea brasiliensis])

HSP 1 Score: 63.5 bits (153), Expect = 5.68e-11
Identity = 36/67 (53.73%), Postives = 44/67 (65.67%), Query Frame = 0 

Query: 1  MLGSGIREFLLGARVVGTRRAIVQIDALPVLFGGTKHRSTISGLFSFSAESVYLVAPSTG 60
          MLG GI E  LGA  +  R A+VQI+ALPVLFG     S ISGLFSFS  S++L  P + 
Sbjct: 32 MLGRGISEVRLGAGAIEIRCAVVQIEALPVLFGNASC-SVISGLFSFSVGSIHLAMPPSV 91

Query: 61 GKGNDGL 67
           +G+ GL
Sbjct: 92 RRGHVGL 97

[Close]
BLAST of MELO.jh031452.1 vs. NCBI nr
Match: GAV78677.1 (Pkinase domain-containing protein [Cephalotus follicularis])

HSP 1 Score: 53.1 bits (126), Expect = 7.12e-06
Identity = 30/49 (61.22%), Postives = 35/49 (71.43%), Query Frame = 0 

Query: 1   MLGSGIREFLLGARVVGTRRAIVQIDALPVLFGGTKHRSTISGLFSFSA 49
           +LGSGI+E  LGA V G      QI+ALPVLFG ++  S ISGLFSFSA
Sbjct: 478 LLGSGIKELRLGAGVTGICPDSGQIEALPVLFGNSRW-SAISGLFSFSA 525

[Close]
BLAST of MELO.jh031452.1 vs. ExPASy TrEMBL
Match: A0A6A6KDG7 (Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_011493 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.75e-11
Identity = 36/67 (53.73%), Postives = 44/67 (65.67%), Query Frame = 0 

Query: 1  MLGSGIREFLLGARVVGTRRAIVQIDALPVLFGGTKHRSTISGLFSFSAESVYLVAPSTG 60
          MLG GI E  LGA  +  R A+VQI+ALPVLFG     S ISGLFSFS  S++L  P + 
Sbjct: 32 MLGRGISEVRLGAGAIEIRCAVVQIEALPVLFGNASC-SVISGLFSFSVGSIHLAMPPSV 91

Query: 61 GKGNDGL 67
           +G+ GL
Sbjct: 92 RRGHVGL 97

[Close]
BLAST of MELO.jh031452.1 vs. ExPASy TrEMBL
Match: A0A1Q3CEN7 (Pkinase domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_22142 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 3.45e-06
Identity = 30/49 (61.22%), Postives = 35/49 (71.43%), Query Frame = 0 

Query: 1   MLGSGIREFLLGARVVGTRRAIVQIDALPVLFGGTKHRSTISGLFSFSA 49
           +LGSGI+E  LGA V G      QI+ALPVLFG ++  S ISGLFSFSA
Sbjct: 478 LLGSGIKELRLGAGVTGICPDSGQIEALPVLFGNSRW-SAISGLFSFSA 525

The following BLAST results are available for this feature:
BLAST of MELO.jh031452.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAF2286186.15.68e-1153.73hypothetical protein GH714_011493 [Hevea brasiliensis][more]
GAV78677.17.12e-0661.22Pkinase domain-containing protein [Cephalotus follicularis][more]
BLAST of MELO.jh031452.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO.jh031452.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6A6KDG72.75e-1153.73Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_011493 PE=4 SV=1[more]
A0A1Q3CEN73.45e-0661.22Pkinase domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_... [more]
BLAST of MELO.jh031452.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh031452.1.t1MELO.jh031452.1.t1mRNA